View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14114_low_2 (Length: 315)

Name: NF14114_low_2
Description: NF14114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14114_low_2
NF14114_low_2
[»] chr1 (21 HSPs)
chr1 (92-161)||(4080963-4081032)
chr1 (280-315)||(41317590-41317625)
chr1 (246-284)||(4080814-4080852)
chr1 (282-315)||(25227303-25227336)
chr1 (283-315)||(4280131-4280163)
chr1 (283-315)||(5765995-5766027)
chr1 (283-315)||(7763754-7763786)
chr1 (283-315)||(9413330-9413362)
chr1 (283-315)||(17483733-17483765)
chr1 (283-315)||(21631112-21631144)
chr1 (283-315)||(25509209-25509241)
chr1 (283-315)||(27037269-27037301)
chr1 (283-315)||(27037535-27037567)
chr1 (283-315)||(28885842-28885874)
chr1 (283-315)||(36695120-36695152)
chr1 (283-315)||(36711221-36711253)
chr1 (283-315)||(37850444-37850476)
chr1 (283-315)||(38613741-38613773)
chr1 (283-315)||(39750386-39750418)
chr1 (283-315)||(42276166-42276198)
chr1 (283-315)||(43456626-43456658)
[»] chr5 (11 HSPs)
chr5 (269-315)||(4976295-4976341)
chr5 (283-315)||(21069637-21069669)
chr5 (283-315)||(3028013-3028045)
chr5 (283-315)||(7940452-7940484)
chr5 (283-315)||(8949812-8949844)
chr5 (283-315)||(14435830-14435862)
chr5 (283-315)||(19571944-19571976)
chr5 (283-315)||(20142264-20142296)
chr5 (283-315)||(23260143-23260175)
chr5 (283-315)||(23286479-23286511)
chr5 (283-315)||(43060416-43060448)
[»] chr7 (9 HSPs)
chr7 (279-315)||(31581673-31581709)
chr7 (281-315)||(32118168-32118202)
chr7 (283-315)||(1574719-1574751)
chr7 (283-315)||(2290021-2290053)
chr7 (283-315)||(9140272-9140304)
chr7 (283-315)||(27813496-27813528)
chr7 (283-315)||(33381578-33381610)
chr7 (283-315)||(34012522-34012554)
chr7 (283-315)||(42541864-42541896)
[»] chr2 (19 HSPs)
chr2 (275-315)||(12890213-12890253)
chr2 (283-315)||(18970734-18970766)
chr2 (281-315)||(28566149-28566183)
chr2 (282-315)||(2060315-2060348)
chr2 (283-315)||(2199978-2200010)
chr2 (283-315)||(2200245-2200277)
chr2 (283-315)||(3095299-3095331)
chr2 (283-315)||(7116304-7116336)
chr2 (283-315)||(8912879-8912911)
chr2 (283-315)||(11201948-11201980)
chr2 (283-315)||(13215825-13215857)
chr2 (283-315)||(18374709-18374741)
chr2 (283-315)||(21220990-21221022)
chr2 (283-315)||(23083515-23083547)
chr2 (283-315)||(24345683-24345715)
chr2 (283-315)||(26322298-26322330)
chr2 (283-315)||(31751069-31751101)
chr2 (283-315)||(41422512-41422544)
chr2 (283-315)||(41494627-41494659)
[»] chr8 (19 HSPs)
chr8 (276-315)||(44888673-44888712)
chr8 (281-315)||(30512766-30512800)
chr8 (282-315)||(17069849-17069882)
chr8 (282-315)||(17578391-17578424)
chr8 (283-315)||(2152245-2152277)
chr8 (283-315)||(5162304-5162336)
chr8 (283-315)||(6050560-6050592)
chr8 (283-315)||(11798605-11798637)
chr8 (283-315)||(12802611-12802643)
chr8 (283-315)||(18111716-18111748)
chr8 (283-315)||(18111980-18112012)
chr8 (283-315)||(18641385-18641417)
chr8 (283-315)||(23487064-23487096)
chr8 (283-315)||(23688170-23688202)
chr8 (283-315)||(32475232-32475264)
chr8 (283-315)||(38967141-38967173)
chr8 (283-315)||(44580616-44580648)
chr8 (283-315)||(45260223-45260255)
chr8 (283-315)||(45283797-45283829)
[»] chr3 (22 HSPs)
chr3 (280-315)||(4759085-4759120)
chr3 (276-315)||(24087340-24087379)
chr3 (281-315)||(45513642-45513676)
chr3 (282-315)||(1327603-1327636)
chr3 (282-315)||(15996778-15996811)
chr3 (283-315)||(1450508-1450540)
chr3 (283-315)||(4759356-4759388)
chr3 (283-315)||(8321925-8321957)
chr3 (283-315)||(10015794-10015826)
chr3 (283-315)||(12906418-12906450)
chr3 (283-315)||(19897841-19897873)
chr3 (283-315)||(28875256-28875288)
chr3 (283-315)||(36099229-36099261)
chr3 (283-315)||(36584710-36584742)
chr3 (283-315)||(41392885-41392917)
chr3 (283-315)||(42801521-42801553)
chr3 (283-315)||(43701178-43701210)
chr3 (283-315)||(46845497-46845529)
chr3 (283-315)||(48904268-48904300)
chr3 (283-315)||(48909872-48909904)
chr3 (283-315)||(51283802-51283834)
chr3 (283-315)||(53686736-53686768)
[»] scaffold0240 (2 HSPs)
scaffold0240 (281-315)||(18761-18795)
scaffold0240 (283-315)||(18497-18529)
[»] chr6 (11 HSPs)
chr6 (281-315)||(13866591-13866625)
chr6 (283-315)||(402626-402658)
chr6 (283-315)||(2090658-2090690)
chr6 (283-315)||(13321331-13321363)
chr6 (283-315)||(13901641-13901673)
chr6 (283-315)||(15498629-15498661)
chr6 (283-315)||(16122519-16122551)
chr6 (283-315)||(23604460-23604492)
chr6 (283-315)||(25045648-25045680)
chr6 (283-315)||(31091445-31091477)
chr6 (283-315)||(34915548-34915580)
[»] chr4 (22 HSPs)
chr4 (281-315)||(25124251-25124285)
chr4 (281-315)||(31937074-31937108)
chr4 (278-315)||(49373698-49373735)
chr4 (283-315)||(4415965-4415997)
chr4 (283-315)||(6807429-6807461)
chr4 (283-315)||(7698474-7698506)
chr4 (283-315)||(18872717-18872749)
chr4 (283-315)||(20455186-20455218)
chr4 (283-315)||(21265220-21265252)
chr4 (283-315)||(24154187-24154219)
chr4 (283-315)||(28495380-28495412)
chr4 (283-315)||(28501391-28501423)
chr4 (283-315)||(29520169-29520201)
chr4 (283-315)||(30523764-30523796)
chr4 (286-314)||(30783678-30783706)
chr4 (283-315)||(32899223-32899255)
chr4 (283-315)||(39670991-39671023)
chr4 (283-315)||(46949992-46950024)
chr4 (283-315)||(49793091-49793123)
chr4 (283-315)||(53564361-53564393)
chr4 (283-315)||(55563132-55563164)
chr4 (283-315)||(56432518-56432550)
[»] scaffold0674 (1 HSPs)
scaffold0674 (283-315)||(5151-5183)
[»] scaffold0549 (1 HSPs)
scaffold0549 (283-315)||(10187-10219)
[»] scaffold0250 (1 HSPs)
scaffold0250 (283-315)||(9166-9198)
[»] scaffold0237 (1 HSPs)
scaffold0237 (283-315)||(6614-6646)
[»] scaffold0163 (1 HSPs)
scaffold0163 (283-315)||(1451-1483)
[»] scaffold0161 (1 HSPs)
scaffold0161 (283-315)||(3438-3470)
[»] scaffold0107 (1 HSPs)
scaffold0107 (283-315)||(48654-48686)
[»] scaffold0039 (1 HSPs)
scaffold0039 (283-315)||(93785-93817)
[»] scaffold0020 (1 HSPs)
scaffold0020 (283-315)||(164214-164246)


Alignment Details
Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 4081032 - 4080963
Alignment:
Q  92 aaggaaaggatggtggtgatgaatgtgaattttaaaaggagaagagtcattagaaacaaaattgtggaac 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4081032 aaggaaaggatggtggtgatgaatgtgaattttaaaaggagaagagtcattagaaacaaaattgtggaac 4080963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 315
Target Start/End: Original strand, 41317590 - 41317625
Alignment:
Q  280 aagtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||| |||||||||||||||||||||||    
T  41317590 aagtactacctccgtccctaattataagaccctttt 41317625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 4080852 - 4080814
Alignment:
Q  246 gatgatacggtgacagtagtggatttagtttattaagta 284  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  4080852 gatgatgcggggacagtagtggatttagtttattaagta 4080814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 25227303 - 25227336
Alignment:
Q  282 gtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| |||||||||||||||||||||||    
T  25227303 gtactacctccgtccctaattataagaccctttt 25227336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 4280163 - 4280131
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  4280163 tactacctccgtccctaattataagaccctttt 4280131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 5766027 - 5765995
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  5766027 tactacctccgtccctaattataagaccctttt 5765995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 7763786 - 7763754
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  7763786 tactacctccgtccctaattataagaccctttt 7763754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 9413362 - 9413330
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  9413362 tactacctccgtccctaattataagaccctttt 9413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 17483733 - 17483765
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  17483733 tactacctccgtccctaattataagaccctttt 17483765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 21631144 - 21631112
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  21631144 tactacctccgtccctaattataagaccctttt 21631112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 25509209 - 25509241
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  25509209 tactacctccgtccctaattataagaccctttt 25509241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 27037269 - 27037301
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  27037269 tactacctccgtccctaattataagaccctttt 27037301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 27037567 - 27037535
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  27037567 tactacctccgtccctaattataagaccctttt 27037535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 28885842 - 28885874
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  28885842 tactacctccgtccctaattataagaccctttt 28885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 36695152 - 36695120
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  36695152 tactccctctgtccctaattataagaccctttt 36695120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 36711253 - 36711221
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  36711253 tactccctctgtccctaattataagaccctttt 36711221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 37850476 - 37850444
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||||| ||||||    
T  37850476 tactacctctgtccctaattataagatcctttt 37850444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 38613773 - 38613741
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  38613773 tactacctccgtccctaattataagaccctttt 38613741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 39750418 - 39750386
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  39750418 tactccctctgtccctaattataagaccctttt 39750386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 42276198 - 42276166
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  42276198 tactacctccgtccctaattataagaccctttt 42276166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 43456658 - 43456626
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  43456658 tactacctccgtccctaattataagaccctttt 43456626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 4976341 - 4976295
Alignment:
Q  269 tttagtttattaagtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  4976341 tttagtttatttagtactacctccgtccctaattataagaccctttt 4976295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 21069637 - 21069669
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||||||||||||    
T  21069637 tactacctctgtccctaattataagaccctttt 21069669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 3028013 - 3028045
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  3028013 tactacctccgtccctaattataagaccctttt 3028045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 7940452 - 7940484
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  7940452 tactacctccgtccctaattataagaccctttt 7940484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 8949812 - 8949844
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  8949812 tactacctccgtccctaattataagaccctttt 8949844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 14435830 - 14435862
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  14435830 tactacctccgtccctaattataagaccctttt 14435862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 19571976 - 19571944
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  19571976 tactacctccgtccctaattataagaccctttt 19571944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 20142296 - 20142264
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  20142296 tactacctccgtccctaattataagaccctttt 20142264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 23260175 - 23260143
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  23260175 tactacctccgtccctaattataagaccctttt 23260143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 23286511 - 23286479
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  23286511 tactacctccgtccctaattataagaccctttt 23286479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 43060448 - 43060416
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  43060448 tactacctccgtccctaattataagaccctttt 43060416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 31581673 - 31581709
Alignment:
Q  279 taagtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31581673 taagtactacctccgtccctaattataagaccctttt 31581709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 32118202 - 32118168
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  32118202 agtactacctccgtccctaattataagaccctttt 32118168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 1574719 - 1574751
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  1574719 tactacctccgtccctaattataagaccctttt 1574751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 2290053 - 2290021
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  2290053 tactacctccgtccctaattataagaccctttt 2290021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 9140272 - 9140304
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||||||||||||||||| |||||||    
T  9140272 tactacctctgtccctaattataaggccctttt 9140304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 27813496 - 27813528
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  27813496 tactacctccgtccctaattataagaccctttt 27813528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 33381610 - 33381578
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  33381610 tactacctccgtccctaattataagaccctttt 33381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 34012554 - 34012522
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  34012554 tactacctccgtccctaattataagaccctttt 34012522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 42541896 - 42541864
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  42541896 tactacctccgtccctaattataagaccctttt 42541864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 12890253 - 12890213
Alignment:
Q  275 ttattaagtactacctctgtccctaattataagaccctttt 315  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  12890253 ttattaaatactacctccgtccctaattataagaccctttt 12890213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18970766 - 18970734
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||||||||||||    
T  18970766 tactacctctgtccctaattataagaccctttt 18970734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 28566149 - 28566183
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  28566149 agtactacctccgtccctaattataagaccctttt 28566183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 2060315 - 2060348
Alignment:
Q  282 gtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| |||||||||||||||||||||||    
T  2060315 gtactacctccgtccctaattataagaccctttt 2060348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 2199978 - 2200010
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  2199978 tactacctccgtccctaattataagaccctttt 2200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 2200277 - 2200245
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  2200277 tactacctccgtccctaattataagaccctttt 2200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 3095299 - 3095331
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  3095299 tactacctccgtccctaattataagaccctttt 3095331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 7116336 - 7116304
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  7116336 tactacctccgtccctaattataagaccctttt 7116304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 8912911 - 8912879
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  8912911 tactacctccgtccctaattataagaccctttt 8912879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 11201980 - 11201948
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  11201980 tactccctctgtccctaattataagaccctttt 11201948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 13215857 - 13215825
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  13215857 tactacctccgtccctaattataagaccctttt 13215825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18374741 - 18374709
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  18374741 tactacctccgtccctaattataagaccctttt 18374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 21221022 - 21220990
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||||||||| |||||||||||||||    
T  21221022 tactacctctgtccctatttataagaccctttt 21220990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23083515 - 23083547
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  23083515 tactacctccgtccctaattataagaccctttt 23083547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 24345715 - 24345683
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  24345715 tactacctccgtccctaattataagaccctttt 24345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 26322330 - 26322298
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  26322330 tactacctccgtccctaattataagaccctttt 26322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 31751069 - 31751101
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  31751069 tactacctccgtccctaattataagaccctttt 31751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 41422512 - 41422544
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  41422512 tactacctccgtccctaattataagaccctttt 41422544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 41494659 - 41494627
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  41494659 tactacctccgtccctaattataagaccctttt 41494627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 44888673 - 44888712
Alignment:
Q  276 tattaagtactacctctgtccctaattataagaccctttt 315  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  44888673 tattaactactacctccgtccctaattataagaccctttt 44888712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 30512766 - 30512800
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||| ||||||||||||||    
T  30512766 agtactacctctgtccctaactataagaccctttt 30512800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 17069882 - 17069849
Alignment:
Q  282 gtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| |||||||||||||||||||||||    
T  17069882 gtactacctccgtccctaattataagaccctttt 17069849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 17578391 - 17578424
Alignment:
Q  282 gtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| |||||||||||||||||||||||    
T  17578391 gtactacctccgtccctaattataagaccctttt 17578424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 2152277 - 2152245
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  2152277 tactacctccgtccctaattataagaccctttt 2152245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 5162304 - 5162336
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  5162304 tactacctccgtccctaattataagaccctttt 5162336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 6050592 - 6050560
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  6050592 tactacctccgtccctaattataagaccctttt 6050560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 11798605 - 11798637
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  11798605 tactccctctgtccctaattataagaccctttt 11798637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 12802611 - 12802643
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  12802611 tactacctccgtccctaattataagaccctttt 12802643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 18111716 - 18111748
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||||||||||||||| |||||||||    
T  18111716 tactacctctgtccctaattataggaccctttt 18111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18112012 - 18111980
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  18112012 tactacctccgtccctaattataagaccctttt 18111980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 18641417 - 18641385
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  18641417 tactacctccgtccctaattataagaccctttt 18641385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23487064 - 23487096
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  23487064 tactacctccgtccctaattataagaccctttt 23487096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 23688202 - 23688170
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  23688202 tactacctccgtccctaattataagaccctttt 23688170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 32475264 - 32475232
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  32475264 tactccctctgtccctaattataagaccctttt 32475232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 38967141 - 38967173
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||||| ||||||    
T  38967141 tactacctctgtccctaattataagatcctttt 38967173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 44580616 - 44580648
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  44580616 tactacctccgtccctaattataagaccctttt 44580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 45260223 - 45260255
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||| ||||||||||||||||||||    
T  45260223 tactacctctgttcctaattataagaccctttt 45260255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 45283829 - 45283797
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  45283829 tactacctccgtccctaattataagaccctttt 45283797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 315
Target Start/End: Original strand, 4759085 - 4759120
Alignment:
Q  280 aagtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||| |||||||||||||||||||||||    
T  4759085 aagtactacctccgtccctaattataagaccctttt 4759120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 24087379 - 24087340
Alignment:
Q  276 tattaagtactacctctgtccctaattataagaccctttt 315  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  24087379 tattaaatactacctccgtccctaattataagaccctttt 24087340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 45513676 - 45513642
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  45513676 agtactacctccgtccctaattataagaccctttt 45513642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 1327603 - 1327636
Alignment:
Q  282 gtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| |||||||||||||||||||||||    
T  1327603 gtactacctcagtccctaattataagaccctttt 1327636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 15996811 - 15996778
Alignment:
Q  282 gtactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| |||||||||||||||||||||||    
T  15996811 gtactacctccgtccctaattataagaccctttt 15996778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 1450540 - 1450508
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||| ||||||||||||||||||||||||||    
T  1450540 tactacatctgtccctaattataagaccctttt 1450508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 4759388 - 4759356
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  4759388 tactacctccgtccctaattataagaccctttt 4759356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 8321925 - 8321957
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  8321925 tactacctccgtccctaattataagaccctttt 8321957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 10015826 - 10015794
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  10015826 tactacctccgtccctaattataagaccctttt 10015794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 12906450 - 12906418
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  12906450 tactacctccgtccctaattataagaccctttt 12906418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 19897873 - 19897841
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  19897873 tactacctccgtccctaattataagaccctttt 19897841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 28875288 - 28875256
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  28875288 tactacctccgtccctaattataagaccctttt 28875256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 36099261 - 36099229
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  36099261 tactccctctgtccctaattataagaccctttt 36099229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 36584710 - 36584742
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||||||||||||||||||| |||||    
T  36584710 tactacctctgtccctaattataagactctttt 36584742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 41392917 - 41392885
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  41392917 tactacctccgtccctaattataagaccctttt 41392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 42801521 - 42801553
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  42801521 tactacctccgtccctaattataagaccctttt 42801553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 43701178 - 43701210
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  43701178 tactccctctgtccctaattataagaccctttt 43701210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 46845529 - 46845497
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  46845529 tactacctccgtccctaattataagaccctttt 46845497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 48904300 - 48904268
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  48904300 tactacctccgtccctaattataagaccctttt 48904268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 48909872 - 48909904
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  48909872 tactacctcagtccctaattataagaccctttt 48909904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 51283802 - 51283834
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  51283802 tactccctctgtccctaattataagaccctttt 51283834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 53686736 - 53686768
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||| ||||||||    
T  53686736 tactacctctgtccctaattataaaaccctttt 53686768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 18795 - 18761
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  18795 agtactacctccgtccctaattataagaccctttt 18761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 18497 - 18529
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  18497 tactacctccgtccctaattataagaccctttt 18529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 13866591 - 13866625
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  13866591 agtactacctccgtccctaattataagaccctttt 13866625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 402658 - 402626
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  402658 tactacctccgtccctaattataagaccctttt 402626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 2090658 - 2090690
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  2090658 tactacctccgtccctaattataagaccctttt 2090690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 13321363 - 13321331
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  13321363 tactacctccgtccctaattataagaccctttt 13321331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 13901641 - 13901673
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  13901641 tactacctccgtccctaattataagaccctttt 13901673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 15498629 - 15498661
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  15498629 tactacctccgtccctaattataagaccctttt 15498661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 16122551 - 16122519
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  16122551 tactacctccgtccctaattataagaccctttt 16122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 23604460 - 23604492
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  23604460 tactacctccgtccctaattataagaccctttt 23604492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 25045680 - 25045648
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  25045680 tactacctccgtccctaattataagaccctttt 25045648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 31091445 - 31091477
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  31091445 tactacctccgtccctaattataagaccctttt 31091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 34915580 - 34915548
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  34915580 tactacctccgtccctaattataagaccctttt 34915548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 25124285 - 25124251
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  25124285 agtactacctccgtccctaattataagaccctttt 25124251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 31937074 - 31937108
Alignment:
Q  281 agtactacctctgtccctaattataagaccctttt 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  31937074 agtactacctccgtccctaattataagaccctttt 31937108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 49373735 - 49373698
Alignment:
Q  278 ttaagtactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  49373735 ttaattactacctccgtccctaattataagaccctttt 49373698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 4415965 - 4415997
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  4415965 tactacctccgtccctaattataagaccctttt 4415997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 6807429 - 6807461
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||| ||||||||||||||||||||||||||||    
T  6807429 tactccctctgtccctaattataagaccctttt 6807461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 7698506 - 7698474
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  7698506 tactacctccgtccctaattataagaccctttt 7698474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 18872717 - 18872749
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  18872717 tactacctccgtccctaattataagaccctttt 18872749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 20455218 - 20455186
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  20455218 tactacctccgtccctaattataagaccctttt 20455186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 21265220 - 21265252
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  21265220 tactacctccgtccctaattataagaccctttt 21265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 24154187 - 24154219
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||| ||||||||||||||||||||||    
T  24154187 tactacctctctccctaattataagaccctttt 24154219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 28495380 - 28495412
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||||| ||||||    
T  28495380 tactacctctgtccctaattataagatcctttt 28495412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 28501423 - 28501391
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  28501423 tactacctccgtccctaattataagaccctttt 28501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 29520201 - 29520169
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  29520201 tactacctccgtccctaattataagaccctttt 29520169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 30523764 - 30523796
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  30523764 tactacctccgtccctaattataagaccctttt 30523796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 30783678 - 30783706
Alignment:
Q  286 tacctctgtccctaattataagacccttt 314  Q
    |||||||||||||||||||||||||||||    
T  30783678 tacctctgtccctaattataagacccttt 30783706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 32899255 - 32899223
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  32899255 tactacctccgtccctaattataagaccctttt 32899223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 39671023 - 39670991
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  39671023 tactacctccgtccctaattataagaccctttt 39670991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 46949992 - 46950024
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  46949992 tactacctccgtccctaattataagaccctttt 46950024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 49793091 - 49793123
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  49793091 tactacctccgtccctaattataagaccctttt 49793123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 53564393 - 53564361
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  53564393 tactacctccgtccctaattataagaccctttt 53564361  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 55563164 - 55563132
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  55563164 tactacctccgtccctaattataagaccctttt 55563132  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 56432518 - 56432550
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  56432518 tactacctccgtccctaattataagaccctttt 56432550  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 5151 - 5183
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  5151 tactacctccgtccctaattataagaccctttt 5183  T

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Target: scaffold0549 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 10219 - 10187
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  10219 tactacctccgtccctaattataagaccctttt 10187  T

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Target: scaffold0250 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 9166 - 9198
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||||||||||||||||||||| ||||||||    
T  9166 tactacctctgtccctaattataacaccctttt 9198  T

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Target: scaffold0237 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 6646 - 6614
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  6646 tactacctccgtccctaattataagaccctttt 6614  T

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Target: scaffold0163 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Complemental strand, 1483 - 1451
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  1483 tactacctccgtccctaattataagaccctttt 1451  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 3438 - 3470
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  3438 tactacctccgtccctaattataagaccctttt 3470  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 48654 - 48686
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  48654 tactacctccgtccctaattataagaccctttt 48686  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 93785 - 93817
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    |||||| ||||||||||||||||||||||||||    
T  93785 tactacatctgtccctaattataagaccctttt 93817  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 164214 - 164246
Alignment:
Q  283 tactacctctgtccctaattataagaccctttt 315  Q
    ||||||||| |||||||||||||||||||||||    
T  164214 tactacctccgtccctaattataagaccctttt 164246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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