View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14115_high_17 (Length: 390)

Name: NF14115_high_17
Description: NF14115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14115_high_17
NF14115_high_17
[»] chr7 (41 HSPs)
chr7 (75-304)||(2825175-2825404)
chr7 (18-65)||(2825449-2825496)
chr7 (177-244)||(20553102-20553169)
chr7 (171-244)||(38010707-38010780)
chr7 (178-244)||(24363605-24363671)
chr7 (171-244)||(48157124-48157197)
chr7 (171-230)||(3610758-3610817)
chr7 (177-243)||(39967919-39967985)
chr7 (177-230)||(20881654-20881707)
chr7 (177-230)||(40530427-40530480)
chr7 (171-231)||(1083795-1083855)
chr7 (180-244)||(9423598-9423662)
chr7 (205-289)||(28128354-28128438)
chr7 (180-232)||(39505958-39506010)
chr7 (178-238)||(44821959-44822019)
chr7 (177-236)||(514766-514825)
chr7 (178-245)||(4966156-4966223)
chr7 (173-232)||(23721501-23721560)
chr7 (184-243)||(34035923-34035982)
chr7 (194-245)||(39280985-39281036)
chr7 (178-244)||(3468614-3468680)
chr7 (178-244)||(18749821-18749887)
chr7 (180-238)||(34754820-34754877)
chr7 (178-228)||(39334193-39334243)
chr7 (178-244)||(39345471-39345537)
chr7 (174-244)||(47559605-47559675)
chr7 (189-238)||(8690408-8690457)
chr7 (185-230)||(22283762-22283807)
chr7 (178-239)||(39360023-39360084)
chr7 (171-244)||(39907796-39907869)
chr7 (171-244)||(44151484-44151557)
chr7 (171-240)||(44241852-44241921)
chr7 (252-289)||(48131416-48131453)
chr7 (177-241)||(19022592-19022656)
chr7 (171-231)||(21453287-21453347)
chr7 (184-224)||(33552874-33552914)
chr7 (177-241)||(33601417-33601480)
chr7 (177-241)||(36484042-36484106)
chr7 (194-230)||(40428571-40428607)
chr7 (194-238)||(44995158-44995202)
chr7 (178-230)||(47130803-47130855)
[»] chr5 (52 HSPs)
chr5 (171-304)||(2568651-2568789)
chr5 (181-244)||(32059363-32059426)
chr5 (177-241)||(33533546-33533610)
chr5 (171-238)||(12425564-12425631)
chr5 (185-244)||(36638754-36638813)
chr5 (178-244)||(41957455-41957521)
chr5 (171-244)||(37588364-37588437)
chr5 (171-232)||(42181108-42181169)
chr5 (179-243)||(4014429-4014493)
chr5 (172-303)||(12459941-12460077)
chr5 (177-245)||(15402832-15402900)
chr5 (171-243)||(39105457-39105529)
chr5 (171-238)||(18704046-18704113)
chr5 (171-230)||(28586784-28586843)
chr5 (178-244)||(18543201-18543266)
chr5 (188-238)||(38104867-38104917)
chr5 (180-230)||(40205092-40205142)
chr5 (178-244)||(40534199-40534265)
chr5 (171-240)||(14961925-14961994)
chr5 (171-244)||(15003518-15003591)
chr5 (177-238)||(16889734-16889795)
chr5 (177-230)||(17368675-17368728)
chr5 (171-244)||(32172646-32172719)
chr5 (171-244)||(37526203-37526276)
chr5 (171-231)||(31030147-31030207)
chr5 (184-244)||(37611219-37611279)
chr5 (184-244)||(37787949-37788009)
chr5 (178-241)||(3237093-3237156)
chr5 (171-242)||(6587113-6587184)
chr5 (177-244)||(15074753-15074820)
chr5 (172-244)||(19138721-19138795)
chr5 (171-230)||(34975357-34975416)
chr5 (171-245)||(2880550-2880624)
chr5 (185-239)||(7319017-7319071)
chr5 (177-243)||(7984968-7985034)
chr5 (171-237)||(10272442-10272508)
chr5 (178-244)||(11615501-11615567)
chr5 (171-245)||(15308996-15309070)
chr5 (179-304)||(17258822-17258952)
chr5 (194-244)||(28409369-28409419)
chr5 (180-230)||(36318776-36318826)
chr5 (171-229)||(41016172-41016230)
chr5 (198-244)||(42582516-42582562)
chr5 (171-244)||(4619700-4619773)
chr5 (178-243)||(14182386-14182450)
chr5 (127-168)||(29588807-29588848)
chr5 (204-244)||(10280602-10280642)
chr5 (176-244)||(17827522-17827590)
chr5 (252-304)||(32849257-32849309)
chr5 (185-229)||(36774726-36774770)
chr5 (178-238)||(40590758-40590818)
chr5 (177-229)||(43300877-43300929)
[»] chr8 (50 HSPs)
chr8 (178-242)||(8060669-8060733)
chr8 (171-244)||(30389092-30389165)
chr8 (187-289)||(42215044-42215143)
chr8 (178-239)||(30277254-30277315)
chr8 (180-230)||(29973153-29973203)
chr8 (178-243)||(9956819-9956884)
chr8 (177-230)||(11183544-11183597)
chr8 (171-232)||(30013211-30013272)
chr8 (184-244)||(2458570-2458630)
chr8 (171-239)||(8062322-8062390)
chr8 (177-241)||(27028830-27028894)
chr8 (171-239)||(31862486-31862554)
chr8 (178-244)||(5088852-5088918)
chr8 (172-230)||(14247242-14247300)
chr8 (171-245)||(28769342-28769416)
chr8 (172-230)||(29973075-29973133)
chr8 (198-244)||(41606907-41606953)
chr8 (177-243)||(43504750-43504816)
chr8 (177-238)||(4558797-4558858)
chr8 (171-244)||(31705078-31705151)
chr8 (252-304)||(4511107-4511159)
chr8 (252-304)||(11376782-11376834)
chr8 (252-299)||(2487952-2487999)
chr8 (177-302)||(7918722-7918844)
chr8 (185-244)||(20672757-20672816)
chr8 (180-223)||(26473777-26473820)
chr8 (181-244)||(38307665-38307728)
chr8 (252-302)||(778468-778518)
chr8 (205-243)||(3536950-3536988)
chr8 (178-244)||(5069697-5069763)
chr8 (178-244)||(11185221-11185287)
chr8 (171-241)||(29417711-29417781)
chr8 (194-244)||(44401577-44401627)
chr8 (179-244)||(2595001-2595066)
chr8 (177-230)||(7645977-7646030)
chr8 (185-238)||(8535780-8535833)
chr8 (177-238)||(11745662-11745723)
chr8 (187-232)||(36643909-36643954)
chr8 (173-230)||(39561559-39561616)
chr8 (198-238)||(6950342-6950382)
chr8 (129-169)||(8536149-8536189)
chr8 (184-244)||(12851182-12851242)
chr8 (171-223)||(18931323-18931375)
chr8 (171-239)||(27728030-27728098)
chr8 (177-221)||(30627929-30627973)
chr8 (205-241)||(30918140-30918176)
chr8 (171-246)||(34570446-34570522)
chr8 (171-243)||(41336650-41336722)
chr8 (187-243)||(42215311-42215367)
chr8 (185-237)||(44236834-44236886)
[»] chr1 (72 HSPs)
chr1 (177-244)||(25479580-25479647)
chr1 (171-241)||(7137005-7137075)
chr1 (171-244)||(23902071-23902144)
chr1 (178-240)||(15558217-15558279)
chr1 (193-242)||(47885039-47885088)
chr1 (178-238)||(12564509-12564569)
chr1 (171-245)||(6659507-6659581)
chr1 (187-304)||(10199347-10199469)
chr1 (171-245)||(14629969-14630043)
chr1 (171-241)||(34290229-34290299)
chr1 (187-244)||(6279408-6279465)
chr1 (171-244)||(35017569-35017642)
chr1 (171-232)||(49888760-49888821)
chr1 (171-243)||(6102147-6102219)
chr1 (171-243)||(38882917-38882988)
chr1 (179-239)||(47598430-47598490)
chr1 (171-230)||(7218092-7218151)
chr1 (181-244)||(15437966-15438029)
chr1 (185-244)||(28077073-28077132)
chr1 (171-242)||(35590898-35590969)
chr1 (171-241)||(37241828-37241899)
chr1 (198-237)||(37818459-37818498)
chr1 (177-244)||(39347971-39348038)
chr1 (178-224)||(5924055-5924101)
chr1 (172-230)||(8130430-8130488)
chr1 (177-239)||(26779934-26779996)
chr1 (182-244)||(31118047-31118109)
chr1 (180-230)||(34952217-34952267)
chr1 (185-243)||(51695500-51695558)
chr1 (171-244)||(3224416-3224489)
chr1 (196-245)||(15361058-15361107)
chr1 (171-244)||(30257676-30257749)
chr1 (179-244)||(32182272-32182337)
chr1 (178-243)||(38503470-38503535)
chr1 (178-235)||(49175619-49175676)
chr1 (171-235)||(3319945-3320009)
chr1 (171-231)||(26946464-26946524)
chr1 (171-243)||(27820342-27820414)
chr1 (180-244)||(28262623-28262687)
chr1 (178-230)||(33976686-33976738)
chr1 (177-245)||(35351038-35351106)
chr1 (172-244)||(37842359-37842431)
chr1 (171-238)||(4549223-4549290)
chr1 (177-244)||(10744300-10744367)
chr1 (187-230)||(30014096-30014139)
chr1 (185-224)||(35677484-35677523)
chr1 (256-299)||(40485717-40485760)
chr1 (178-229)||(51929794-51929845)
chr1 (177-243)||(219556-219622)
chr1 (178-244)||(7262522-7262588)
chr1 (171-237)||(25005808-25005874)
chr1 (178-244)||(27140478-27140544)
chr1 (171-241)||(45975683-45975753)
chr1 (181-219)||(50319273-50319311)
chr1 (171-244)||(3924617-3924690)
chr1 (171-244)||(12564878-12564951)
chr1 (179-244)||(17269251-17269316)
chr1 (178-223)||(22810653-22810698)
chr1 (194-243)||(27820201-27820250)
chr1 (171-240)||(42556639-42556708)
chr1 (180-244)||(3223670-3223733)
chr1 (177-241)||(3234022-3234086)
chr1 (171-239)||(5592694-5592762)
chr1 (177-241)||(12287199-12287263)
chr1 (178-230)||(15488954-15489006)
chr1 (252-304)||(18327085-18327137)
chr1 (171-244)||(28689456-28689531)
chr1 (197-245)||(33975589-33975637)
chr1 (177-224)||(39803915-39803963)
chr1 (171-231)||(40394903-40394962)
chr1 (210-242)||(48748321-48748353)
chr1 (178-230)||(49938747-49938799)
[»] chr3 (52 HSPs)
chr3 (175-244)||(33883754-33883823)
chr3 (171-244)||(22214663-22214736)
chr3 (177-244)||(45432943-45433010)
chr3 (178-243)||(21367667-21367732)
chr3 (171-244)||(24785198-24785271)
chr3 (181-238)||(39885541-39885598)
chr3 (171-239)||(38975913-38975981)
chr3 (132-239)||(12985354-12985459)
chr3 (171-230)||(14548739-14548798)
chr3 (185-244)||(37273141-37273200)
chr3 (178-241)||(41644452-41644515)
chr3 (187-230)||(44488892-44488935)
chr3 (178-244)||(237397-237463)
chr3 (178-244)||(1217804-1217870)
chr3 (178-244)||(36887504-36887570)
chr3 (185-239)||(38462288-38462342)
chr3 (178-244)||(39602214-39602280)
chr3 (171-225)||(42733960-42734014)
chr3 (185-239)||(44284089-44284143)
chr3 (171-225)||(51510216-51510270)
chr3 (203-244)||(41057179-41057220)
chr3 (171-244)||(43115049-43115122)
chr3 (178-239)||(43875465-43875526)
chr3 (183-244)||(49465669-49465730)
chr3 (171-239)||(23785248-23785316)
chr3 (177-241)||(53789468-53789532)
chr3 (171-222)||(22203423-22203474)
chr3 (171-230)||(24887301-24887360)
chr3 (178-302)||(45590664-45590780)
chr3 (185-239)||(2719475-2719529)
chr3 (178-244)||(20669172-20669238)
chr3 (178-244)||(36646386-36646452)
chr3 (178-244)||(52619003-52619069)
chr3 (180-225)||(21335677-21335722)
chr3 (178-231)||(25075066-25075119)
chr3 (178-243)||(34610811-34610876)
chr3 (174-239)||(34924547-34924612)
chr3 (255-304)||(36189711-36189760)
chr3 (211-244)||(38318993-38319026)
chr3 (171-208)||(42753599-42753636)
chr3 (178-230)||(1816583-1816635)
chr3 (177-225)||(18405854-18405902)
chr3 (179-223)||(24158528-24158572)
chr3 (177-241)||(25776116-25776180)
chr3 (177-241)||(28622006-28622070)
chr3 (177-221)||(30956653-30956697)
chr3 (177-221)||(30972465-30972509)
chr3 (187-239)||(34254817-34254869)
chr3 (177-241)||(39980728-39980792)
chr3 (197-241)||(40608388-40608432)
chr3 (177-229)||(44747427-44747479)
chr3 (252-304)||(50211814-50211866)
[»] chr2 (61 HSPs)
chr2 (171-244)||(22681189-22681262)
chr2 (172-244)||(29316779-29316851)
chr2 (171-238)||(11513891-11513958)
chr2 (177-241)||(16867738-16867802)
chr2 (176-243)||(9174813-9174880)
chr2 (171-243)||(29628748-29628820)
chr2 (177-244)||(1893285-1893352)
chr2 (184-239)||(35810802-35810857)
chr2 (171-238)||(39983335-39983402)
chr2 (178-244)||(1625900-1625966)
chr2 (171-304)||(18179179-18179317)
chr2 (185-243)||(35379021-35379079)
chr2 (171-245)||(35485910-35485984)
chr2 (171-249)||(42419990-42420068)
chr2 (171-245)||(43985006-43985080)
chr2 (185-246)||(6546994-6547055)
chr2 (185-289)||(8017441-8017550)
chr2 (171-244)||(10285853-10285926)
chr2 (174-243)||(26143645-26143714)
chr2 (178-243)||(40279197-40279262)
chr2 (187-243)||(7928304-7928360)
chr2 (252-304)||(29430837-29430889)
chr2 (192-244)||(41809249-41809301)
chr2 (171-238)||(6227744-6227811)
chr2 (177-244)||(33942149-33942216)
chr2 (184-239)||(35993389-35993444)
chr2 (178-240)||(5133772-5133834)
chr2 (178-244)||(10563562-10563628)
chr2 (177-223)||(10884546-10884592)
chr2 (178-240)||(11488277-11488339)
chr2 (171-229)||(35486382-35486440)
chr2 (267-301)||(37419609-37419643)
chr2 (178-244)||(38078414-38078480)
chr2 (179-300)||(40158719-40158845)
chr2 (176-242)||(41407603-41407668)
chr2 (171-237)||(42621386-42621452)
chr2 (199-304)||(43529797-43529907)
chr2 (184-230)||(45229517-45229563)
chr2 (185-230)||(3611233-3611278)
chr2 (252-289)||(5902503-5902540)
chr2 (171-232)||(7193865-7193926)
chr2 (187-244)||(9530732-9530789)
chr2 (177-230)||(30552662-30552715)
chr2 (171-244)||(33931574-33931647)
chr2 (210-243)||(35378537-35378570)
chr2 (252-301)||(41170689-41170738)
chr2 (187-244)||(41817177-41817234)
chr2 (189-238)||(42457959-42458008)
chr2 (179-244)||(43911003-43911068)
chr2 (187-244)||(44443330-44443387)
chr2 (182-230)||(3059292-3059340)
chr2 (194-230)||(5781685-5781721)
chr2 (262-302)||(17443549-17443589)
chr2 (171-243)||(28039337-28039409)
chr2 (178-230)||(28933824-28933876)
chr2 (178-230)||(32694212-32694264)
chr2 (179-243)||(40279268-40279332)
chr2 (179-243)||(40279338-40279402)
chr2 (177-241)||(41851534-41851598)
chr2 (171-239)||(43141864-43141932)
chr2 (266-302)||(43199928-43199964)
[»] chr6 (38 HSPs)
chr6 (171-245)||(4006707-4006781)
chr6 (183-237)||(7931800-7931854)
chr6 (171-238)||(281858-281925)
chr6 (171-244)||(2112193-2112266)
chr6 (184-244)||(7931730-7931790)
chr6 (171-243)||(13907578-13907650)
chr6 (171-230)||(2117396-2117455)
chr6 (178-244)||(8010357-8010423)
chr6 (178-244)||(20368184-20368250)
chr6 (185-234)||(33498626-33498675)
chr6 (180-244)||(4420645-4420709)
chr6 (179-249)||(33558543-33558615)
chr6 (171-230)||(1275142-1275201)
chr6 (185-244)||(6647394-6647453)
chr6 (171-230)||(9093574-9093633)
chr6 (171-230)||(19800454-19800513)
chr6 (177-231)||(837233-837287)
chr6 (210-244)||(6536979-6537013)
chr6 (178-244)||(8183145-8183211)
chr6 (178-232)||(25100043-25100097)
chr6 (194-232)||(29957938-29957976)
chr6 (178-240)||(34430469-34430531)
chr6 (171-244)||(415297-415370)
chr6 (177-230)||(835267-835320)
chr6 (171-208)||(2727896-2727933)
chr6 (171-244)||(17241256-17241329)
chr6 (252-289)||(26559193-26559230)
chr6 (179-244)||(34403856-34403921)
chr6 (242-290)||(769207-769255)
chr6 (184-228)||(2205610-2205654)
chr6 (171-239)||(3201956-3202024)
chr6 (178-230)||(9732476-9732528)
chr6 (249-301)||(10031808-10031860)
chr6 (177-241)||(14492301-14492365)
chr6 (208-244)||(18604616-18604652)
chr6 (171-235)||(31671087-31671151)
chr6 (262-302)||(33385618-33385658)
chr6 (171-203)||(34405104-34405136)
[»] chr4 (55 HSPs)
chr4 (179-245)||(29263371-29263437)
chr4 (171-244)||(6466050-6466123)
chr4 (171-244)||(7694014-7694087)
chr4 (171-244)||(35405940-35406013)
chr4 (185-304)||(18628492-18628606)
chr4 (177-244)||(24929492-24929559)
chr4 (178-244)||(26747406-26747472)
chr4 (172-284)||(1137706-1137823)
chr4 (171-281)||(49202638-49202754)
chr4 (180-244)||(8469381-8469445)
chr4 (178-230)||(11158375-11158427)
chr4 (178-230)||(11264301-11264353)
chr4 (177-241)||(17822872-17822936)
chr4 (171-278)||(42866061-42866173)
chr4 (171-239)||(49219132-49219200)
chr4 (194-245)||(5131253-5131304)
chr4 (171-230)||(30207589-30207648)
chr4 (171-238)||(36048526-36048593)
chr4 (171-229)||(42121481-42121539)
chr4 (171-228)||(2900333-2900390)
chr4 (171-244)||(8468941-8469014)
chr4 (194-239)||(28614817-28614862)
chr4 (185-230)||(29601026-29601071)
chr4 (252-300)||(22471353-22471401)
chr4 (256-304)||(50298598-50298646)
chr4 (185-245)||(53673661-53673721)
chr4 (180-244)||(55084485-55084549)
chr4 (182-245)||(17884072-17884135)
chr4 (194-241)||(41603418-41603465)
chr4 (132-222)||(51044506-51044597)
chr4 (178-244)||(10192284-10192349)
chr4 (171-245)||(20936232-20936306)
chr4 (210-244)||(43824315-43824349)
chr4 (171-229)||(53943599-53943657)
chr4 (171-220)||(18630673-18630722)
chr4 (194-239)||(19429725-19429770)
chr4 (171-244)||(20907340-20907413)
chr4 (212-245)||(22662250-22662283)
chr4 (177-230)||(24370971-24371024)
chr4 (185-238)||(29563414-29563467)
chr4 (185-230)||(31006025-31006070)
chr4 (129-166)||(36734822-36734859)
chr4 (256-304)||(1017111-1017159)
chr4 (194-230)||(2977995-2978031)
chr4 (185-217)||(8147899-8147931)
chr4 (171-227)||(8422860-8422916)
chr4 (182-230)||(18019976-18020024)
chr4 (185-241)||(24169270-24169326)
chr4 (203-243)||(31038872-31038912)
chr4 (171-239)||(35507466-35507534)
chr4 (217-289)||(42641452-42641524)
chr4 (252-304)||(51560228-51560280)
chr4 (178-234)||(52734803-52734859)
chr4 (177-241)||(53294121-53294185)
chr4 (177-241)||(55414427-55414491)
[»] scaffold0003 (1 HSPs)
scaffold0003 (181-239)||(306329-306387)
[»] scaffold0020 (1 HSPs)
scaffold0020 (178-230)||(159991-160043)
[»] scaffold0018 (1 HSPs)
scaffold0018 (171-230)||(178343-178402)
[»] scaffold0167 (1 HSPs)
scaffold0167 (177-225)||(17275-17323)
[»] scaffold0159 (1 HSPs)
scaffold0159 (194-230)||(27017-27053)


Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 75 - 304
Target Start/End: Complemental strand, 2825404 - 2825175
Alignment:
Q  75 gaggagtatacttttaggttatgtttggataaacaaattattttggcgtttcttatataagtgcttatgtataacctctttctttaacaaaataactata 174  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2825404 gaggagtatacttttaggttatgtttggataaacagattattttggcgtttcttatataagtgcttatgtataacctctttctttaacaaaataactata 2825305  T
Q  175 aactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagt 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2825304 aactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataagatggtttcataagttcttccaaagagt 2825205  T
Q  275 ctcacaagtgcttatataagtagataagct 304  Q
    ||||||||||||||||||||||||||||||    
T  2825204 ctcacaagtgcttatataagtagataagct 2825175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 2825496 - 2825449
Alignment:
Q  18 atgcttatctctttaatcagttttctttcatgttcttatatcagaagg 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2825496 atgcttatctctttaatcagttttctttcatgttcttatatcagaagg 2825449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 20553102 - 20553169
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||||||| |||||||| || ||||||||||||| ||||||| |||||||||||||    
T  20553102 ctataagttgttttcacaagttatcctagtgagcttatggaaataatctgaaaacaacttatgaacat 20553169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 38010707 - 38010780
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||| |||||||| || ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  38010707 tataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 38010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 24363671 - 24363605
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| |||||||||| ||||  |||||||||||||||||||| |||||||| ||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacat 24363605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 48157197 - 48157124
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||| ||||||||||||||||| |  |||| ||||||||||||||||||||| | |||||| ||||    
T  48157197 tataagctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacat 48157124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 3610817 - 3610758
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||||||||||||||  || |||||||||||| ||||| |||||||||||||||    
T  3610817 tataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 39967919 - 39967985
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||||||| ||||||||  |||||||| ||| ||||||| |||||| | ||||||||||    
T  39967919 ctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaaca 39967985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 20881707 - 20881654
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||||| || ||||| || |||||||||| ||||||||||||||    
T  20881707 ctataagttgttttcataaactatcttaaagaacttatgaaaataagctgaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 40530480 - 40530427
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||| | ||||||||||| |||||||||| ||||||| ||||||    
T  40530480 ctataagttgttttaataagctatcctaaagaacttatgaaaataagttgaaaa 40530427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 1083855 - 1083795
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    |||||||||||||||||||||| | |||| |||  |||||||| | |||||||||||||||    
T  1083855 tataaactataagttgttttcataggctaccctgaagaacttacgtaaataagctgaaaat 1083795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 9423662 - 9423598
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| |||||| | |||||||||| |||| ||| | ||||||||||||||| |||||||||||||    
T  9423662 taagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacat 9423598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 28128438 - 28128354
Alignment:
Q  205 gagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtgcttat 289  Q
    ||||| |||||||||||||||||||| || | ||| ||||||  || ||||| ||||||| | ||| | ||||||||||||||||    
T  28128438 gagaatttatggaaataagctgaaaacaattcatgcacataagttgttttcacaagttctccaaaacaatctcacaagtgcttat 28128354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 39505958 - 39506010
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    ||||||||||||| ||||||| || ||||  ||||||||||||||||||||||    
T  39505958 taagttgttttcataagctattctggagagtttatggaaataagctgaaaata 39506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 44821959 - 44822019
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||| |||||||| ||||||| || ||||||||||| ||||||| |||||| |||||||    
T  44821959 tataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 514766 - 514825
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactt 236  Q
    ||||||| |||||||| |||||||||| |||| ||| |  ||||||||||||||||||||    
T  514766 ctataagctgttttcataagctatcctggagagcttgtcaaaataagctgaaaataactt 514825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 4966156 - 4966223
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||| |||||||| |||| |||||  ||| ||||||||||||| ||||||| |||||||| |||||    
T  4966156 tataagctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacata 4966223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 23721501 - 23721560
Alignment:
Q  173 taaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    |||||||||||||||||| | |||||||||| | |  |||||||||||||||||| ||||    
T  23721501 taaactataagttgtttttataagctatccttgtgcgcttatggaaataagctgagaata 23721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 34035923 - 34035982
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||| |||||||| ||||||||||  | ||||||| |||||| ||||||||||||    
T  34035923 ttgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaaca 34035982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 39280985 - 39281036
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||| | |||||| ||||||||||||||||||| |||||||| |||||    
T  39280985 aagctatcttggagaacatatggaaataagctgaaaacaacttatggacata 39281036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 3468614 - 3468680
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| | |||||| || |||||||||||||||| |||||||||| || ||| |||||||| ||||    
T  3468614 tataagcttttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacat 3468680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 18749887 - 18749821
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| ||||||||   || |||||||||||||||||||||||   |||||||||||    
T  18749887 tataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacat 18749821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 34754877 - 34754820
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||||||||||| || ||||||| |||| || |||||||||||||||||| |||||||    
T  34754877 taagttgttttcataaactatcct-gagagctgatggaaataagctgaaaacaacttat 34754820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 39334193 - 39334243
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaa 228  Q
    |||||| |||||||| |||||||||| | || |||||||||||||||||||    
T  39334193 tataagctgttttcaaaagctatcctggcgagcttatggaaataagctgaa 39334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 39345471 - 39345537
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| ||||||||||   || ||||||||||||||||||||  |||||||| ||||    
T  39345471 tataagctgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacat 39345537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 47559675 - 47559605
Alignment:
Q  174 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||| |||||||| ||| |||  | ||||||||||| |||| ||| ||||| |||||||||||||    
T  47559675 aaactataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacat 47559605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 8690457 - 8690408
Alignment:
Q  189 ttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||| ||| |||||||||||||||||||||||||||  |||||| |||||    
T  8690457 ttcataagttatcctagagaacttatggaaataagccaaaaatagcttat 8690408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 22283807 - 22283762
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||| || | ||| ||||||||||||||||||||||||||||    
T  22283807 tgttttcataaaccatcttagagaacttatggaaataagctgaaaa 22283762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 39360023 - 39360084
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||| |||||||| |||||||||| | || ||||| ||||||||||||||  ||||||||    
T  39360023 tataagatgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatg 39360084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 39907796 - 39907869
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||  |||||||| || ||||| ||||||||| ||| |||||||||||||| | || ||||||||    
T  39907796 tataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacat 39907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 44151557 - 44151484
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| || ||||| |  | | ||||||||||||||||||||| | |||||| ||||    
T  44151557 tataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacat 44151484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 44241852 - 44241921
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    ||||| |||||||||||||||| |||||||| |  | | ||||| |||||||||||||||| | ||||||    
T  44241852 tataacctataagttgttttcataagctatcttgaatagcttatagaaataagctgaaaatgatttatga 44241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 48131416 - 48131453
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttat 289  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  48131416 tttcataagttcttccaaacagtctcataagtgcttat 48131453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 19022656 - 19022592
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||| | |||||||  | ||||||||||| ||||||| |||| | ||||||||||    
T  19022656 ctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaa 19022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 21453287 - 21453347
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    ||||| ||||||  |||||||| ||||||||||||||| || ||| | |||||||||||||    
T  21453287 tataagctataaactgttttcataagctatcctagagagctaatgaagataagctgaaaat 21453347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 33552914 - 33552874
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagc 224  Q
    ||||||||| |||||||| ||||||||||||| ||||||||    
T  33552914 ttgttttcataagctatcttagagaacttatgaaaataagc 33552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 33601480 - 33601417
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||| | |||||||| ||||||||||||| |  ||||||||||| | ||||||||    
T  33601480 ctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 33601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 36484106 - 36484042
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||||||||| ||||||  ||| ||||| |||||| | |||||| | ||||||||    
T  36484106 ctataagttgttttcacaagttatcctgaagagcttatagaaatatgttgaaaacaccttatgaa 36484042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 40428571 - 40428607
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  40428571 aagctatcctaaagagcttatggaaataagctgaaaa 40428607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 44995202 - 44995158
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||||| | |||||||||| |||||||| ||||||||||||||    
T  44995202 aagctatcattgagaacttatagaaataagatgaaaataacttat 44995158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 47130855 - 47130803
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||| |||||||| | |||||||| || ||||||| ||||||    
T  47130855 tataagttgttttcataagctatcttggagaacttgtgaaaataagttgaaaa 47130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 2568651 - 2568789
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttctt 265  Q
    ||||| |||||||||||||||| |||||||| | |||| || ||| ||||||||| |||||||||||||||     |||||  || ||||||||||||||    
T  2568651 tataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttctt 2568750  T
Q  266 ccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    | ||| |||||| |||||||||| |  ||||||||||||    
T  2568751 ctaaacagtctctcaagtgcttacaccagtagataagct 2568789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 32059426 - 32059363
Alignment:
Q  181 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  32059426 aagttcttttcataagctatcctagagaacttatcgaaataagctgaaaacaactcatgaacat 32059363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 33533610 - 33533546
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||| ||||||||||||||||| | |||| |||||||||||||| |||||| ||||||||||    
T  33533610 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 33533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 12425564 - 12425631
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| ||||||| ||||||||||||||||| | ||||||||||| ||||||| |||||| |||||||    
T  12425564 tataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 36638754 - 36638813
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||| | |||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacat 36638813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 41957521 - 41957455
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| |||||||||| ||||||||||| ||||||| |||||| |||||||| ||||    
T  41957521 tataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacat 41957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 37588437 - 37588364
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| ||| ||| || |||| ||||||||||||||||||||| | ||||| |||||    
T  37588437 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacat 37588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 42181169 - 42181108
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    ||||| ||||||||||||| |||||| ||||||||||| || | ||||||||||||||||||    
T  42181169 tataagctataagttgtttgcacaagttatcctagagagctcaaggaaataagctgaaaata 42181108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 4014493 - 4014429
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||| |||||||| |||||||| | ||||||||||| |||||||||||||| | ||||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 12460077 - 12459941
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttc 266  Q
    |||||||||||||||| ||||||||||||| |  ||| |||||| ||||||||  |||| ||| ||||||     |||||  || ||||||| ||||| |    
T  12460077 ataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcc 12459978  T
Q  267 caaagagtctcacaagtgcttatataagtagataagc 303  Q
    |||| ||||||||| |||||||| | || ||||||||    
T  12459977 caaacagtctcacaggtgcttatgtcagcagataagc 12459941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 15402900 - 15402832
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||||||||||| || ||||  |||||||| ||| ||||| ||||||||| ||||||||||||||    
T  15402900 ctataagttgttttcataacctattttagagaacgtatagaaattagctgaaaacaacttatgaacata 15402832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 39105457 - 39105529
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||| ||||||  |||||||| |||||||| | ||||||||||| ||||||||| |||||| ||||||||||    
T  39105457 tataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaaca 39105529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 18704113 - 18704046
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| |||||||||||||||| |||||||   | ||| ||||||||||||||||||||| |||||||    
T  18704113 tataagctataagttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttat 18704046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 28586843 - 28586784
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||| |||||| |||||| || |||||||||||||| ||||| |||||||||||||||    
T  28586843 tataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctgaaaa 28586784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 18543266 - 18543201
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||| ||| ||||    
T  18543266 tataagttgttttcataagctatcctggagagcttat-gaaataagctgaaaacaactcatggacat 18543201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 38104917 - 38104867
Alignment:
Q  188 tttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| |||||||| |||||| ||||||||||||||||||||| |||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaacttat 38104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 40205142 - 40205092
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||| |||||||||| |||| ||||| |||||||||||||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaa 40205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 40534199 - 40534265
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| |||| ||||||  | ||||||||||    
T  40534199 tataagttgttttcataagctatcccagagagcttatggaagtaagatgaaaactaattatgaacat 40534265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 14961925 - 14961994
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    |||||||||||||||||||||| ||| |||||| ||||  ||||| || |||| |||||||||| |||||    
T  14961925 tataaactataagttgttttcataagttatccttgagacgttatgaaattaagttgaaaataacatatga 14961994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 15003591 - 15003518
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||| ||||||| ||||||||| ||||| |||||||||||||   ||||| |||||| ||||||    
T  15003591 tataagctataagtggttttcataagctatccaagagagcttatggaaataaatcgaaaacaacttacgaacat 15003518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 16889734 - 16889795
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||||| |||||||| ||||||| |||||||  |||||||||||| ||||||| |||||||    
T  16889734 ctataagctgttttcataagctatgctagagagtttatggaaataatctgaaaacaacttat 16889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 17368675 - 17368728
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||||| |||||||| | ||||  ||||||||||||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaa 17368728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 32172646 - 32172719
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||| |||||||| |||||||| |  |||||| |||||||||||||||||||  |||||| ||||    
T  32172646 tataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacat 32172719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 37526276 - 37526203
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| ||| | | || |||| ||||||||||||||||||||| | ||||| |||||    
T  37526276 tataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacat 37526203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 31030207 - 31030147
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    ||||| |||||||| ||||||  ||||| |||| |||| ||||||||||||||||||||||    
T  31030207 tataagctataagtagttttcctaagctgtcctggagagcttatggaaataagctgaaaat 31030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 37611279 - 37611219
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||| |||||||| | |||| ||||||||||||| ||||||| | |||||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacat 37611219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 37788009 - 37787949
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||| |||||||| | |||| ||||||||||||| ||||||| | |||||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacat 37787949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 3237093 - 3237156
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||| |||||||| ||||||||||| ||| |||||| ||||| |||||| | ||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttatgaa 3237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 6587184 - 6587113
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 242  Q
    ||||| |||||||||||||||| |||||||  | |||||||| || |||||||||| ||| | |||||||||    
T  6587184 tataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaac 6587113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 15074820 - 15074753
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||| ||| ||| || || | ||||||||||||||||||||| | |||||| ||||    
T  15074820 ctataagttgttttcataagttatactggaaagcttatggaaataagctgaaaacagcttatggacat 15074753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 19138795 - 19138721
Alignment:
Q  172 ataaactataagttgttttcacaagctatccta--gagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| |||||||||||||||| |||||||  ||  |||| ||||||||||||||||||||| || ||||| ||||    
T  19138795 ataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaacaatttatgtacat 19138721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 34975357 - 34975416
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||||| ||||||||  |||||||||| |||| || ||||||||||||||||||    
T  34975357 tataagctataaattgttttcgtaagctatcctggagagctaatggaaataagctgaaaa 34975416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 2880624 - 2880550
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| |||||||||||||| | ||||||| |   |||  |||||||||||||||||||| | ||||||||||||    
T  2880624 tataatctataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacata 2880550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 7319071 - 7319017
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||| |||||||| | ||||||||||| ||||||||||| || ||||||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 7319017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 7984968 - 7985034
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||| | |||||| |||||||| | ||||| ||||| |||||||||||||| | ||||||||||    
T  7984968 ctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 10272508 - 10272442
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 237  Q
    ||||| |||||||||||||||| |||| ||| | ||||  ||||| |||||||||||||| ||||||    
T  10272508 tataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 11615501 - 11615567
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| ||| ||||||   || ||||||||||||||||||||| | |||||||||||    
T  11615501 tataagctgttttcataagatatccttatgagcttatggaaataagctgaaaacagcttatgaacat 11615567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 15309070 - 15308996
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| ||||||||||||||||  ||||||| | |||| |||||| ||||||| |||||| |  |||||||||||    
T  15309070 tataagctataagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaacata 15308996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 17258952 - 17258822
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaagag 273  Q
    ||||| |||||||| || |||||||  ||| |||||| |||||||||||||| | ||||||||     |||||  |  ||||||| ||||| |||||||     
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaa 17258853  T
Q  274 tctcacaagtgcttatataagtagataagct 304  Q
    | |||||||||||||| | ||| ||||||||    
T  17258852 tgtcacaagtgcttatgttagttgataagct 17258822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 28409419 - 28409369
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||  |||||||| | |||||||||||||||||||||||| ||||    
T  28409419 aagctatcccggagaacttgtagaaataagctgaaaataacttatggacat 28409369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 36318776 - 36318826
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||| |||||||| | ||||| ||||| ||||||||||||||    
T  36318776 taagttgttttcataagctatcttggagaatttatgtaaataagctgaaaa 36318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 41016172 - 41016230
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    ||||| ||||||||||||||||||||| ||| | || | |||||| |||||||||||||    
T  41016172 tataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagctgaaa 41016230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 42582516 - 42582562
Alignment:
Q  198 tatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| ||||||||||||||||||||| ||||||||| ||||| ||||    
T  42582516 tatcttagagaacttatggaaataagttgaaaataatttatggacat 42582562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 4619700 - 4619773
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||  ||| |||| |||||||| | ||||||||||||||||||| |||||  | |||||||||||    
T  4619700 tataatctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacat 4619773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 14182450 - 14182386
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||| |||||||| ||| |||||| ||||||||||| ||||||| |||||| || |||||||||    
T  14182450 tataagctgttttcataagttatcct-gagaacttatgaaaataagttgaaaacaatttatgaaca 14182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 29588807 - 29588848
Alignment:
Q  127 ttatataagtgcttatgtataacctctttctttaacaaaata 168  Q
    |||||||||||||||||||||| || ||||| ||||||||||    
T  29588807 ttatataagtgcttatgtataagctatttctataacaaaata 29588848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 10280642 - 10280602
Alignment:
Q  204 agagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||||||||||| || |||||||| ||||    
T  10280642 agagaacttatggaaataagctgataacaacttatggacat 10280602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 17827522 - 17827590
Alignment:
Q  176 actataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||   |||||||| ||||||  ||| | ||||||||||||||||| ||| ||||||    
T  17827522 actataagttgtttttgtaagctatcttagagaggttacgaaaataagctgaaaataatttacgaacat 17827590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 32849257 - 32849309
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||||||| ||||| || |||||||||||||||   ||||||||||||    
T  32849257 tttcataagttctcccaaacagcctcacaagtgcttatgatagtagataagct 32849309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 36774770 - 36774726
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    |||||| | |||||||||| |||| ||||||||||||||||||||    
T  36774770 tgtttttataagctatcctggagagcttatggaaataagctgaaa 36774726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 40590758 - 40590818
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||| | ||||||||||||| | | |||| |||||||||||||||| |||| |||||||    
T  40590758 tataagctattttcacaagctaacttggagagcttatggaaataagctcaaaacaacttat 40590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 43300877 - 43300929
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    ||||||||||||||   |||||||| | ||||||||||| |||||||||||||    
T  43300877 ctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaa 43300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 8060669 - 8060733
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 242  Q
    |||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8060669 tataagctgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaac 8060733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 30389092 - 30389165
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||| | |||||||| ||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  30389092 tataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacat 30389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 42215143 - 42215044
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtgct 286  Q
    |||||| |||||||| | |||| |||||| |||||||||||||| |||||||||||||    || ||||||||||||| ||||| ||| |||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacat---gtgttttcataagttctcccaaacagtgtcacaagtgct 42215047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 30277315 - 30277254
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||| |||||||| |||||||||||||||  |||||||||||||||||||| ||||||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 29973153 - 29973203
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||    
T  29973153 taagttgttttcacaagctatccttgagaatttatggaaataaactgaaaa 29973203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 9956884 - 9956819
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||||||||| || ||||| | ||||||||||| ||||||||||||||  |||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 11183544 - 11183597
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||    
T  11183544 ctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaa 11183597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 30013211 - 30013272
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    ||||| ||||||| |||||||| ||||||||||  |||||| ||||||||||||||||||||    
T  30013211 tataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaata 30013272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 2458630 - 2458570
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| || ||||||||||||||| ||||||||||||| ||||||| | |||||||||||    
T  2458630 ttgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacat 2458570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 8062322 - 8062390
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| ||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| | ||||||    
T  8062322 tataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 27028830 - 27028894
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||| |||||||| |||||||| | |||| |||||| |||||||||||||||| ||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 31862486 - 31862554
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| ||||||| |||||||| ||| ||||||||||| |||||| |||||||||||||| | ||||||    
T  31862486 tataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 5088852 - 5088918
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||| |||||| | |||||| ||||    
T  5088852 tataagttgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacat 5088918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 14247300 - 14247242
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||| |||||||  ||| |||| ||||||||||||| ||||||||||||||    
T  14247300 ataaactataagctgttttcgtaagatatcgtagagaacttatgaaaataagctgaaaa 14247242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 28769416 - 28769342
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| ||||||| |||||||| |||||||  | ||||  |||||||||||||||||||| |||||||| |||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacata 28769342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 29973075 - 29973133
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||| |||||||||||||||| |||||||||| ||||  |||||||||||| |||||||    
T  29973075 ataagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaa 29973133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 41606953 - 41606907
Alignment:
Q  198 tatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacat 41606907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 43504750 - 43504816
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||| |||||| | |||||||| | |||||||||||||||||||||||||| | ||||| ||||    
T  43504750 ctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaaca 43504816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 4558797 - 4558858
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||||| ||||| || ||||||||||||||| ||||||||||||| || |||| |||||||    
T  4558797 ctataagctgtttccataagctatcctagagagcttatggaaataaactaaaaacaacttat 4558858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 31705078 - 31705151
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||| |||||||| ||||| |||| ||||  |||||||||||||||||||| | |||||| ||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacat 31705151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 4511107 - 4511159
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    |||||||||||||| | || |||||||||||||||||||  ||||||||||||    
T  4511107 tttcataagttctttcgaatagtctcacaagtgcttataccagtagataagct 4511159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 11376782 - 11376834
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||||||| ||||| |||||||||||  ||||||| ||||||||||||    
T  11376782 tttcataagttctcccaaatagtctcacaagaacttatatcagtagataagct 11376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 2487999 - 2487952
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagat 299  Q
    ||||||||||||| ||||| |||||||||||||||||| | |||||||    
T  2487999 tttcataagttctcccaaacagtctcacaagtgcttatgtcagtagat 2487952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 7918844 - 7918722
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtct 276  Q
    |||||||||||||||| |||||||| |  ||| ||| ||||||||||||||||| |  ||||    ||||  || ||||||||| ||| ||||| |||||    
T  7918844 ctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacagattat---aataagttgttttcataagctctcccaaacagtct 7918748  T
Q  277 cacaagtgcttatataagtagataag 302  Q
    |||||||| ||||   ||||||||||    
T  7918747 cacaagtgtttatgctagtagataag 7918722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 20672757 - 20672816
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| | |||||||||| |||| |||||| |||||||||||||| | |||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacat 20672816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 26473820 - 26473777
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataag 223  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||    
T  26473820 taagttgttttcataagctatcctagagagcttatgaaaataag 26473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 38307665 - 38307728
Alignment:
Q  181 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||| |||| || |||||| ||||    
T  38307665 aagttgttttcacaagctatcttggagaaattatgaaaataagccgaaagtagcttatgcacat 38307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Original strand, 778468 - 778518
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataag 302  Q
    |||||||||||||| |||| |||||||||||||||||| | |||| |||||    
T  778468 tttcataagttcttgcaaacagtctcacaagtgcttatttcagtaaataag 778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 3536988 - 3536950
Alignment:
Q  205 gagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||||||||||||||||| || |||||||||    
T  3536988 gagaacttatggaaataagctgaaaacaatttatgaaca 3536950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 5069697 - 5069763
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| ||| |||| | || | |||||| ||||||||||||||| ||||||||||||    
T  5069697 tataagctgttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacat 5069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 11185221 - 11185287
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||   ||||||| | |||| || ||||||||||| |||||| |||||||||||||    
T  11185221 tataagttgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaacat 11185287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 29417781 - 29417711
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||||||||| |||||||| || ||||| | ||||||||||   |||||||| |||||| ||||||||    
T  29417781 tataaactataagatgttttcataaactatcattgagaacttatatgaataagctaaaaatagcttatgaa 29417711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 44401577 - 44401627
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| ||||| |||||||||||||||||||||||||| ||  |||||||||    
T  44401577 aagccatcctggagaacttatggaaataagctgaaaacaatgtatgaacat 44401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 2595066 - 2595001
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||| |||||    |||| ||||||||  ||||||||||||| |||||||||||||    
T  2595066 ataagttgttttcataagctgcattagacaacttatgagaataagctgaaaacaacttatgaacat 2595001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 7645977 - 7646030
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||||| |||||| |||  | | |||||||||||||||||||||    
T  7645977 ctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaa 7646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 8535833 - 8535780
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||||| ||  ||||||||||| |||||||||||||||| |||||| |||||    
T  8535833 tgttttcataaattatcctagagagcttatggaaataagcttaaaatagcttat 8535780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 11745723 - 11745662
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||||| |||||| | |||||||||||| || |||||| || ||||||||||| |||||||    
T  11745723 ctataagctgtttttataagctatcctagtgagcttatgaaactaagctgaaaacaacttat 11745662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 36643954 - 36643909
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    |||||| |||||||| | |||||| |||||||||||||||||||||    
T  36643954 ttttcataagctatcatggagaacgtatggaaataagctgaaaata 36643909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 39561616 - 39561559
Alignment:
Q  173 taaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||||||||  |||||||| |  | | |||||||||||||||||||||    
T  39561616 taaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagctgaaaa 39561559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 6950342 - 6950382
Alignment:
Q  198 tatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  6950342 tatcctaaagagcttatggaaataagctgaaaacaacttat 6950382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 8536189 - 8536149
Alignment:
Q  129 atataagtgcttatgtataacctctttctttaacaaaataa 169  Q
    |||||||||||||||||||| || ||||| |||||||||||    
T  8536189 atataagtgcttatgtataagctatttctataacaaaataa 8536149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 12851182 - 12851242
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||| ||||| |||| |||| |||||| |||||||| ||||| | |||||||||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacat 12851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 18931375 - 18931323
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataag 223  Q
    ||||| || |||| |||||||| ||||||||||||||||||| | ||||||||    
T  18931375 tataagctgtaagctgttttcataagctatcctagagaacttgttgaaataag 18931323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 27728098 - 27728030
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||| ||| ||||||||||| ||||||||||||||   | ||||||||||||| |||| | ||||||    
T  27728098 tataaagtattagttgttttcataagctatcctagagggatgatggaaataagctaaaaaaagcttatg 27728030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 30627973 - 30627929
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaata 221  Q
    |||||||||||||||| ||| |||| |||||| ||||||||||||    
T  30627973 ctataagttgttttcataagttatcttagagagcttatggaaata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 30918140 - 30918176
Alignment:
Q  205 gagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  30918140 gagagcttatggaaataagctgaaaacaacttatgaa 30918176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 34570446 - 34570522
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctg-aaaataacttatgaacataa 246  Q
    ||||||| | ||||| ||||||||| |||||| ||||| | ||||||||||||||| |||| | |||||| ||||||    
T  34570446 tataaacaacaagttattttcacaaactatccgagagagcatatggaaataagctgtaaaacagcttatggacataa 34570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 41336722 - 41336650
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||| || ||||||||| ||||||||   |||| |||  |||||||||||||||| ||||||| ||||    
T  41336722 tataaactagaacttgttttcataagctatctaggagagcttgcggaaataagctgaaaacaacttataaaca 41336650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 42215367 - 42215311
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||| | |||||||| |||| |||||| |||||||||||||| | ||||||||||    
T  42215367 ttttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaaca 42215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 44236886 - 44236834
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 237  Q
    |||||||| |||||||  | |||| |||||| |||||||||||||||||||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 25479580 - 25479647
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||||||| |||| ||||||||    
T  25479580 ctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacat 25479647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 7137075 - 7137005
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||| ||||||| |||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaa 7137005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 23902144 - 23902071
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| |||||||| |||||| ||||||||| ||||||||||| |||||||| ||||    
T  23902144 tataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacat 23902071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 15558217 - 15558279
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    |||||| |||||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  15558217 tataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatga 15558279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 47885088 - 47885039
Alignment:
Q  193 caagctatcctagagaacttatggaaataagctgaaaataacttatgaac 242  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  47885088 caagctatcatagagaacttatggaaataagctgaaaacaacttatgaac 47885039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 12564569 - 12564509
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||| |||||||||| |||||||| | |||||||||||||||||||||||||| |||||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttat 12564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 6659507 - 6659581
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| ||||||| |||||||| |||||| || ||||| ||||| ||||||||||||||| |||||||| |||||    
T  6659507 tataagctataagatgttttcataagctaaccaagagagcttatcgaaataagctgaaaacaacttatggacata 6659581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 10199469 - 10199347
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaagagtctcacaa 281  Q
    |||||| |||||||  |||||| |||||| |||||||||||||| ||||||||||     |||||  |  |||||| |||||| ||||| ||| ||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaa 10199370  T
Q  282 gtgcttatataagtagataagct 304  Q
    |||||||| | ||||||||||||    
T  10199369 gtgcttatgttagtagataagct 10199347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 14630043 - 14629969
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| ||||||| | |||||| |||||||| | ||||  |||||||||||||||||||| ||||||||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacata 14629969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 34290229 - 34290299
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||| ||||||| |||||||| |||||||| |  |||||||||| |||||||||||||| ||||||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 6279408 - 6279465
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| ||||||||||||||| |||||||||||| |||||||| |||||||| ||||    
T  6279408 ttttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacat 6279465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 35017569 - 35017642
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||| | |||||||| ||||| |||| |||| |||||||||||||| ||||||||||||||| ||||    
T  35017569 tataatctatatgctgttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggacat 35017642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 49888760 - 49888821
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    ||||| |||| ||||||||||| |||||||| ||||||||||||| |||||||| |||||||    
T  49888760 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 49888821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 6102147 - 6102219
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||| |||||||| |||||||| ||||||||   ||||| |||||||||||||||||||| || |||||||||    
T  6102147 tatacactataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaaca 6102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 38882988 - 38882917
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||| ||||||||||||||| ||||| || ||||||||||||| ||||||| |||||| | ||||||||||    
T  38882988 tataaaatataagttgttttcataagctctc-tagagaacttatgaaaataagttgaaaacaccttatgaaca 38882917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 47598490 - 47598430
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||||||||| |||||||||| |||| ||||||| || |||||||||| ||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatggcaacaagctgaaaacaacttatg 47598430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 7218151 - 7218092
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||||||||||||||| || ||||||| ||||||||||| ||||||| ||||||    
T  7218151 tataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaa 7218092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 15437966 - 15438029
Alignment:
Q  181 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||| | |||||||| ||||  ||| ||||||||||||||| ||||||||||||||    
T  15437966 aagttgttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacat 15438029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 28077132 - 28077073
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||| |||||||  |||||| ||||| ||||||||||||||| |||||||||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 35590969 - 35590898
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 242  Q
    ||||| |||||||| | ||||| |||||||| | |||| ||||||||||||||||||||| |||| ||||||    
T  35590969 tataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaacaactgatgaac 35590898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 37241899 - 37241828
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagct-gaaaataacttatgaa 241  Q
    ||||| ||| |||||||||||| ||| ||||||||||| |||||| ||||||||| ||||| ||||||||||    
T  37241899 tataagctagaagttgttttcataagatatcctagagagcttatgaaaataagctggaaaaaaacttatgaa 37241828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 37818459 - 37818498
Alignment:
Q  198 tatcctagagaacttatggaaataagctgaaaataactta 237  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  37818459 tatcctagagaacttatggaaataagctgaaaacaactta 37818498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 39348038 - 39347971
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||| || |||||||  | | ||||||||||||||||||||| |||||||| ||||    
T  39348038 ctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacat 39347971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 5924055 - 5924101
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagc 224  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  5924055 tataagttgttttcataagttatcctagagagcttatggaaataagc 5924101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 8130430 - 8130488
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||| |||||||||||||||| |||||||| | || |||||||||||| ||||||||||    
T  8130430 ataagctataagttgttttcataagctatcatggaaaacttatggaaacaagctgaaaa 8130488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 26779996 - 26779934
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||||||||||| |||||||| |  |||||||||| ||||||| |||||| ||||||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 31118047 - 31118109
Alignment:
Q  182 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||| |||||| |||   |||||||||||||||||||||||| |||| ||||||||    
T  31118047 agttgttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacat 31118109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 34952217 - 34952267
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||||||    
T  34952217 taagttgttttcataagctatcaaagagaacttatgaaaataagctgaaaa 34952267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 51695558 - 51695500
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||| |||||||| | ||||| ||||| |||||||||||||||| ||||||||||    
T  51695558 tgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 51695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 3224416 - 3224489
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||| | |||||| | ||||||| |||||||||||||| ||||||||||| || |||||||| ||||    
T  3224416 tataagctatagggtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacat 3224489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 15361058 - 15361107
Alignment:
Q  196 gctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  15361058 gctatcctggagagcttatgaaaataagctgaaaacaacttatgaacata 15361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 30257676 - 30257749
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| || ||||||||||||| || ||||||| |||  ||||| ||||||||||||||| | |||||||||||    
T  30257676 tataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacat 30257749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 32182272 - 32182337
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||| || ||||| |  ||| |||| |||||||||||||||| |||||||||||||    
T  32182272 ataagttgttttcaaaatctatcttgaagagcttaaggaaataagctgaaaaaaacttatgaacat 32182337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 38503535 - 38503470
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||||    ||||||| | ||||||||||| |||||||||||||| ||||||||||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 49175619 - 49175676
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataact 235  Q
    |||||||| ||| ||||||||||| |  ||||||||||||||||||||||||| ||||    
T  49175619 tataagttatttgcacaagctatcatgtagaacttatggaaataagctgaaaacaact 49175676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 3320009 - 3319945
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataact 235  Q
    ||||||||||||||||||  |  |||||||| |||||| |||||||| |||||||||||| ||||    
T  3320009 tataaactataagttgttaacgtaagctatcatagagatcttatggatataagctgaaaacaact 3319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 26946524 - 26946464
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    ||||| |||||||| ||||||| |||||||| ||||||| | ||| |||||||||||||||    
T  26946524 tataagctataagtcgttttcataagctatcttagagaagtcatgaaaataagctgaaaat 26946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 27820414 - 27820342
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||| ||||| | |||||| | |||||||| | ||||| ||||| |||||||||||||||| ||||||||||    
T  27820414 tataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 27820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 28262687 - 28262623
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| |||||||| ||| ||||||| |||||||||||||||||||| |||| || ||||| ||||    
T  28262687 taagctgttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacat 28262623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 33976686 - 33976738
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||  || |||||||||||| |||||||||||||| ||||||    
T  33976686 tataagttgttttcttaacctatcctagagagcttatggaaataagttgaaaa 33976738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 35351038 - 35351106
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||||||||| |||| || |||||||||||| ||||   |||||||||||||| ||||||| ||||||    
T  35351038 ctataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaacttataaacata 35351106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 37842431 - 37842359
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| |||||||||||||||| |||||||| |  |||||||||  ||||||||||||||   |||||||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacat 37842359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 4549223 - 4549290
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| ||||||| || |||||||| ||||||  || | ||||||||||||||||||||| |||||||    
T  4549223 tataagctataagctgctttcacaaactatccaggatagcttatggaaataagctgaaaacaacttat 4549290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 10744300 - 10744367
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||| |||||||| ||||| || ||||||||||||  ||||||| |||||| | |||||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacat 10744367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 30014139 - 30014096
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||    
T  30014139 ttttcataagctatgctagagaacttacggaaataagctgaaaa 30014096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 35677484 - 35677523
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagc 224  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  35677484 tgttttcacaagctatcctgaagaacttatggaaataagc 35677523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 40485760 - 40485717
Alignment:
Q  256 ataagttcttccaaagagtctcacaagtgcttatataagtagat 299  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||    
T  40485760 ataagttctcccaaacagtctcacaagtgcttatgtaagtagat 40485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 51929845 - 51929794
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    |||||| |||||||| ||||||| ||||||| ||||||||||||||| ||||    
T  51929845 tataagctgttttcataagctattctagagagcttatggaaataagccgaaa 51929794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 219622 - 219556
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||||||| || ||||| ||||  ||| ||||||||||| ||||||||| | ||||||||||    
T  219622 ctataagttgtttacataagctgtcctgaagagcttatggaaatgagctgaaaacagcttatgaaca 219556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 7262588 - 7262522
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||| |||||| ||||||||||  ||| ||| |||||||||| |||||| | |||||||||||    
T  7262588 tataagttcttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacat 7262522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 25005874 - 25005808
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 237  Q
    ||||| |||||||||||||||| |||||||||| |||| |||||  ||| ||||| |||||| ||||    
T  25005874 tataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatctta 25005808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 27140478 - 27140544
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||| | |||||||| | |||| |||||| |||||||||||||| |||||||| ||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacat 27140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 45975683 - 45975753
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||| ||| ||| |||||||| |||||||| | ||||| ||||| |||||||||||||| | ||||||||    
T  45975683 tataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 50319273 - 50319311
Alignment:
Q  181 aagttgttttcacaagctatcctagagaacttatggaaa 219  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  50319273 aagttgttttcataagctatcctagagagcttatggaaa 50319311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 3924617 - 3924690
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||| ||||||||| | ||||||||||  |||  |||||||||||||| ||||| ||||||| |||||    
T  3924617 tataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacat 3924690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 12564951 - 12564878
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| |||||||| |  ||  |||| |||||||||||||||| | |||||| ||||    
T  12564951 tataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacat 12564878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 17269251 - 17269316
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||| |||||||||| |||| |||| || |||||| | |||| |||| ||||||||    
T  17269251 ataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacat 17269316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 22810698 - 22810653
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataag 223  Q
    ||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  22810698 tataagttgttttcataagttatcatagagaacttacggaaataag 22810653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 27820250 - 27820201
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||| || |||| ||||| |||||||||||||||| ||||||||||    
T  27820250 aagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaaca 27820201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 42556708 - 42556639
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    ||||| |||||||||||||||| |||||||| | ||||  ||||   ||||| |||||||||||||||||    
T  42556708 tataagctataagttgttttcataagctatcatggagagtttatatcaataaactgaaaataacttatga 42556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 3223670 - 3223733
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||  ||| |||||||| || |||||| |||||||||||||| ||||||| |||||    
T  3223670 taagttgttttcgtaagttatcctagcgagcttatg-aaataagctgaaaacaacttataaacat 3223733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 3234086 - 3234022
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||| | |||||||  | ||||||||||| |||||||  ||||| ||||||||||    
T  3234086 ctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaa 3234022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 5592762 - 5592694
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| |||||||||||||||| ||||||  ||  ||| |||||| |||||||||| ||| ||||||||    
T  5592762 tataagctataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 12287263 - 12287199
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||||  |||||||| ||  |||||||   |||||||||||||| ||||||||||    
T  12287263 ctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaa 12287199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 15488954 - 15489006
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||| ||||| |||| ||| ||||||||||||||| | |||||||||||||||    
T  15488954 tatacgttgtcttcataagttatcctagagaacttgtagaaataagctgaaaa 15489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 18327137 - 18327085
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||||||||||||| ||| ||| ||||||||||   ||||||||||||    
T  18327137 tttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagct 18327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 28689531 - 28689456
Alignment:
Q  171 tataaactataagttgttttcaca--agctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| |  ||||||| | || | |||||| |||||||||||||| |||||||| ||||    
T  28689531 tataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacat 28689456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 33975589 - 33975637
Alignment:
Q  197 ctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||||||| |||||| ||||||||||||||||  ||||| |||||    
T  33975589 ctatcctagagagcttatgaaaataagctgaaaatagtttatggacata 33975637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 39803963 - 39803915
Alignment:
Q  177 ctataagttgttttcacaa-gctatcctagagaacttatggaaataagc 224  Q
    |||||||||||||||| || |||||||||||||  ||||||||||||||    
T  39803963 ctataagttgttttcataatgctatcctagagattttatggaaataagc 39803915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 40394962 - 40394903
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    |||||| ||||||||||||||| || | |||||| ||| |||||| |||||||||||||||    
T  40394962 tataaattataagttgttttcataacc-atcctatagagcttatgaaaataagctgaaaat 40394903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 48748353 - 48748321
Alignment:
Q  210 cttatggaaataagctgaaaataacttatgaac 242  Q
    ||||||||||||||||||||| |||||||||||    
T  48748353 cttatggaaataagctgaaaacaacttatgaac 48748321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 49938747 - 49938799
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||| | |||||||  ||||||||||||| ||||||| ||||||    
T  49938747 tataagttgtttttataagctatattagagaacttatgaaaataagttgaaaa 49938799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 33883823 - 33883754
Alignment:
Q  175 aactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||| ||||||| || |||||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  33883823 aactatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacat 33883754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 22214736 - 22214663
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||||| |||||||||||||||  ||| |||||||||||||||| | |||||| ||||    
T  22214736 tataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacat 22214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 45433010 - 45432943
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||||||||  |||||  ||| ||||||||||||||||||||| |||||||||||||    
T  45433010 ctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaacat 45432943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 21367667 - 21367732
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||||||||||| | ||| ||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaaca 21367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 24785198 - 24785271
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||  |||||||| |||||||||| |||| |||||| ||||||||| |||| |||||||||||||    
T  24785198 tataatctataacgtgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacat 24785271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 39885541 - 39885598
Alignment:
Q  181 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||||||||| |||||||||||| || | ||| |||||||||||||||||||||||    
T  39885541 aagttgttttcataagctatcctagggagcatattgaaataagctgaaaataacttat 39885598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 38975981 - 38975913
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| |||||||||||||||||||  || |||||||| |||||||||||||| |||| ||| ||||||    
T  38975981 tataagctataagttgttttcacaaaataacctagagagcttatggaaataagttgaatatagcttatg 38975913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 12985459 - 12985354
Alignment:
Q  132 taagtgcttatgtataacctctttctttaacaaaataactataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    |||||| ||||||||||  | ||||| |||||||||||  |||||  ||||  |||||||| ||||||||||  ||||||||||||||||||| |||||     
T  12985459 taagtgtttatgtataagttgtttctataacaaaataaa-ataaag-ataaactgttttcataagctatcctcaagaacttatggaaataagccgaaaac 12985362  T
Q  232 aacttatg 239  Q
    ||||||||    
T  12985361 aacttatg 12985354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 14548798 - 14548739
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||||||||||||||| ||| ||| || |||| |||||||||||||||||||||    
T  14548798 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 14548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 37273141 - 37273200
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||| |||||||| | ||||||||||||||||||| |||||| |||||||| ||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacat 37273200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 41644515 - 41644452
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||| |||||||| |||||||| |||||| |||| |||||||||||||||| | ||||||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaa 41644452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 44488892 - 44488935
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaa 44488935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 237397 - 237463
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| ||| ||||||| ||| |||| |||||||||||||||| | |||||| ||||    
T  237397 tataagttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacat 237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 1217870 - 1217804
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| |||||||||| ||||||||||| || |||| |||||| |||||||| ||||    
T  1217870 tataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacat 1217804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 36887504 - 36887570
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| |||| ||| |  |||||||||| |||||||||||||| | |||||||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacat 36887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 38462288 - 38462342
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||| ||||||||| ||| | ||||||||||||||||||||| ||||||||    
T  38462288 tgttttcataagctatccaagatagcttatggaaataagctgaaaacaacttatg 38462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 39602280 - 39602214
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| |||||||| | ||||||||||| ||||||| |||||| || ||||||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacat 39602214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 42734014 - 42733960
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagct 225  Q
    ||||| ||||||||||||||||| ||||||| | |||| ||||||||||||||||    
T  42734014 tataagctataagttgttttcaccagctatcgtggagagcttatggaaataagct 42733960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 44284143 - 44284089
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||| |||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  44284143 tgttttcataagctatcctggagagcttatagaaataagctgaaaatagcttatg 44284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 51510270 - 51510216
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagct 225  Q
    |||||||||||||||||||||| ||| |||| | |||| ||||||||||||||||    
T  51510270 tataaactataagttgttttcataagttatcgtggagagcttatggaaataagct 51510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 41057179 - 41057220
Alignment:
Q  203 tagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  41057179 tagagaacttatgataataagctgaaaataacttatgaacat 41057220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 43115049 - 43115122
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||||||||||||  | ||||| | |||| ||||||||||||||||||||| || ||||| ||||    
T  43115049 tataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacat 43115122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 43875465 - 43875526
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||| |||| ||| |||||||||| |||||||||||||||||| | ||||| ||||||||    
T  43875465 tataagatgttctcataagctatcctggagaacttatggaaataatcagaaaacaacttatg 43875526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 49465730 - 49465669
Alignment:
Q  183 gttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||| ||||||| || ||||||||||||||||||||| |||| | || ||||||||    
T  49465730 gttgttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatgaacat 49465669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 23785248 - 23785316
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| ||||||  |||||||||||||| || | |||| |||||||||| |||||||||| ||||||||    
T  23785248 tataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaacaacttatg 23785316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 53789532 - 53789468
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||| ||| |||||||| | ||||||||||| || ||||||||||| | ||||||||    
T  53789532 ctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaa 53789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 22203423 - 22203474
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataa 222  Q
    ||||| |||||||||||||||| |||||||| | ||||||||||| ||||||    
T  22203423 tataatctataagttgttttcataagctatcttggagaacttatgaaaataa 22203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 24887360 - 24887301
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| ||| ||| |||||||| |||||||||| |||| ||||||| |||||||||||||    
T  24887360 tataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaa 24887301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 45590664 - 45590780
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctc 277  Q
    ||||||||||||||| ||| |||||  || || | ||||||||||| ||||||||||||||| || ||        ||||||| ||| ||||| ||||||    
T  45590664 tataagttgttttcataagttatccaggacaaatcatggaaataagttgaaaataacttatggactta--------tcataagctctcccaaacagtctc 45590755  T
Q  278 acaagtgcttatataagtagataag 302  Q
    ||||||||||||   ||||||||||    
T  45590756 acaagtgcttatgctagtagataag 45590780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 2719475 - 2719529
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||| |||||||| | ||||||||||| ||||||||||| || ||||||||    
T  2719475 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 2719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 20669172 - 20669238
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| |||||||| | |||| |||||| |||||||| ||||| | |||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacat 20669238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 36646452 - 36646386
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| |||||| | |||||| ||||    
T  36646452 tataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacat 36646386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 52619003 - 52619069
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| ||||||||||||||||| |  ||| ||| || ||||||| |||||||| |||||||||||    
T  52619003 tataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacat 52619069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 21335677 - 21335722
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagct 225  Q
    |||| |||||||| ||||||| |||||||||||||| |||||||||    
T  21335677 taagctgttttcataagctatactagagaacttatgaaaataagct 21335722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 25075066 - 25075119
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    |||||| | |||||| |||||||| ||||||||| ||| |||||||||||||||    
T  25075066 tataagctcttttcataagctatcatagagaactaatgaaaataagctgaaaat 25075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 34610876 - 34610811
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||| ||||| |||||||| | | ||||||||| |||| |||||||||  |||||||||||    
T  34610876 tataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaaca 34610811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 34924612 - 34924547
Alignment:
Q  174 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||||| || | |||||| |||||||| |||||| |||||| |||||||||||||| ||| ||||    
T  34924612 aaactatgagctattttcataagctatcttagagagcttatgaaaataagctgaaaacaacatatg 34924547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 36189711 - 36189760
Alignment:
Q  255 cataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||| |||||| |||||||||||||||||||  |||| |||||||    
T  36189711 cataagttcctccaaacagtctcacaagtgcttatactagtaaataagct 36189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 38318993 - 38319026
Alignment:
Q  211 ttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||||||||| |||||||||||    
T  38318993 ttatggaaataagctgaaaatagcttatgaacat 38319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 42753599 - 42753636
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagaga 208  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  42753599 tataagctataagttgtttttacaagctatcctagaga 42753636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 1816583 - 1816635
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||| ||||||| || |||| |||||  ||||||||||||||    
T  1816583 tataagttgttttcataagctatactggagagcttatcaaaataagctgaaaa 1816635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 18405902 - 18405854
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagct 225  Q
    |||||||||||||||| |||||||| | ||||||||||| || ||||||    
T  18405902 ctataagttgttttcataagctatcttggagaacttatgaaattaagct 18405854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 24158572 - 24158528
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataag 223  Q
    ||||| |||||||| |||||||||| |||| ||||||||||||||    
T  24158572 ataagctgttttcataagctatcctggagagcttatggaaataag 24158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 25776116 - 25776180
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||||| ||| | || |  ||||||||||||| ||||||||||| | ||||||||    
T  25776116 ctataagttgttttcataagttgtcttgaagaacttatggaagtaagctgaaaacagcttatgaa 25776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 28622070 - 28622006
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||| |||||||| || ||||| | ||||||||||| |||||| ||||||| | ||||||||    
T  28622070 ctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 30956697 - 30956653
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaata 221  Q
    |||||||||||||||| |||||||| | |||||||||||| ||||    
T  30956697 ctataagttgttttcaaaagctatcttggagaacttatgggaata 30956653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 30972509 - 30972465
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaata 221  Q
    |||||||||||||||| |||||||| | |||||||||||| ||||    
T  30972509 ctataagttgttttcaaaagctatcttggagaacttatgggaata 30972465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 34254869 - 34254817
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||| ||||||| || ||||||||||| ||||||||||||| || ||||||    
T  34254869 ttttcataagctattctggagaacttatgtaaataagctgaaagtagcttatg 34254817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 39980728 - 39980792
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||| | |||||||  | ||||||||||| ||||||| |||||| | ||||||||    
T  39980728 ctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaa 39980792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 40608432 - 40608388
Alignment:
Q  197 ctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||| |||||||||||||| ||||||||||| | ||||||||    
T  40608432 ctatcctggagaacttatggaagtaagctgaaaacagcttatgaa 40608388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 44747479 - 44747427
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    ||||||| |||||||| |||||||| | || |||||||| |||||||||||||    
T  44747479 ctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 50211814 - 50211866
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    |||||||||||||  |||| ||||| |||||||||||| | ||||||||||||    
T  50211814 tttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagct 50211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 22681262 - 22681189
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||| |||||||| || ||||||||||||||||||||||||||||| |||| | |||||||||||    
T  22681262 tataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 22681189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 29316851 - 29316779
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| ||||||| ||||||||  ||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  29316851 ataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacat 29316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 11513891 - 11513958
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| |||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| |||||    
T  11513891 tataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttat 11513958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 16867738 - 16867802
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||| ||||||||||||||||| | |||| |||||||||||||| |||||| ||||||||||    
T  16867738 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaa 16867802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 9174813 - 9174880
Alignment:
Q  176 actataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||| |||||||| |||||||| || ||| |||||| |||||||||||||||| ||||||||||    
T  9174813 actataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaaca 9174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 29628820 - 29628748
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||| |||||||||||| ||| |||||||| | || || |||||||||||||||||||| || |||||||||    
T  29628820 tataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaaca 29628748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 1893352 - 1893285
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||| |||||||  |||||||| | |||||||| || ||||||||||||||||||||||| ||||    
T  1893352 ctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacat 1893285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 35810857 - 35810802
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||||||| | |||||||||||||||||||| || |||||| |||||||||||||    
T  35810857 ttgttttcatacgctatcctagagaacttatgaaagtaagctaaaaataacttatg 35810802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 39983335 - 39983402
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| |||||||||||||||| |||||||||| |||| || ||| |||||| ||||||||| |||||    
T  39983335 tataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttat 39983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 1625900 - 1625966
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| |||||||| | ||||||||| | |||| ||||||||| | |||||||||||    
T  1625900 tataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacat 1625966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 18179317 - 18179179
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca-----taacatggtttcataagttctt 265  Q
    ||||| ||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||| || ||| |||     ||| ||| ||||||||   |||    
T  18179317 tataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacactt 18179218  T
Q  266 ccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||| |  || |||||||||||| ||| ||||||||||    
T  18179217 ccaaacaaacttacaagtgcttatgtaactagataagct 18179179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 35379079 - 35379021
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||| |||||||| | |||| |||||| |||||||||||||| ||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca 35379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 35485910 - 35485984
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| |||||||||||||| | ||||||||||  ||| | ||||||||| ||||||||| | ||||||||||||    
T  35485910 tataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacata 35485984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 42419990 - 42420068
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacat 249  Q
    ||||| ||||||| | |||||| |||||||||| || | ||||||||||| ||||||||| || |||||||||| ||||    
T  42419990 tataatctataagctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacat 42420068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 43985080 - 43985006
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||| ||||||||||||||| |||||||| |  ||| |||||| ||||||||||||||||  | |||||||||    
T  43985080 tataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatagataatgaacata 43985006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 6546994 - 6547055
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataa 246  Q
    ||||||||||||||||| |||||| ||||| |||||||| |||||||| |||| | ||||||    
T  6546994 tgttttcacaagctatcttagagaccttatagaaataagttgaaaatagcttaaggacataa 6547055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 8017441 - 8017550
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataaca-----tggtttcataagttcttccaaagagtctcac 279  Q
    |||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||||||||| ||     || ||||||||||||| ||||| | || |||    
T  8017441 tgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttctcccaaataatcgcac 8017540  T
Q  280 aagtgcttat 289  Q
    ||||||||||    
T  8017541 aagtgcttat 8017550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 10285853 - 10285926
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||| |||| || |||||| | ||||||||||||||||||||| |||||| | |||||| ||||    
T  10285853 tataagctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacat 10285926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 26143714 - 26143645
Alignment:
Q  174 aaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||| |||| |||||||| |||||| | | ||||||||||| |||||||||||||||||| | ||||||    
T  26143714 aaactgtaagctgttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaaca 26143645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 40279197 - 40279262
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||||||||||||| |||||||  | ||||||||||| |||| |||||||||||  |||||||||    
T  40279197 tataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaaca 40279262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 7928360 - 7928304
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||| ||| |||||| | ||||||||||| |||||||||||||| ||||||||||||    
T  7928360 tttttacaggctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 29430837 - 29430889
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||||||||||||| |||| |||||||| |||| | ||||||||||||    
T  29430837 tttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataagct 29430889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 41809301 - 41809249
Alignment:
Q  192 acaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||| |||| | |||||||||||||||| |||| |||||||||||||    
T  41809301 acaagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacat 41809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 6227744 - 6227811
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||||||||||| ||||||| |||||||  | |||| ||||||| || |||||||||| |||||||    
T  6227744 tataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaaacaacttat 6227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 33942149 - 33942216
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||| |||| ||| |||||| || ||| |||| ||||||||| | |||||||||||    
T  33942149 ctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacat 33942216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 35993444 - 35993389
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||| || |||||||| ||||||||||||| |||||||||||||| || |||||    
T  35993444 ttgtttgcataagctatcatagagaacttatgaaaataagctgaaaacaatttatg 35993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 5133772 - 5133834
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    |||||| |||||||| ||| ||||  ||||| |||||||||||||||||||| || |||||||    
T  5133772 tataagctgttttcaaaagttatctaagagagcttatggaaataagctgaaagtagcttatga 5133834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 10563628 - 10563562
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| ||||||| ||  ||| |||| | |||||||||||||||| |||||| ||||    
T  10563628 tataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacat 10563562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 10884592 - 10884546
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataag 223  Q
    ||||||| |||||||| ||||||||||||||| |||||| |||||||    
T  10884592 ctataagctgttttcataagctatcctagagagcttatgaaaataag 10884546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 11488277 - 11488339
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    |||||| || ||||| |||||||||| ||||  ||||| |||||||||||||| |||||||||    
T  11488277 tataagctgctttcataagctatcctggagagattatgcaaataagctgaaaacaacttatga 11488339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 35486440 - 35486382
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    ||||| ||||||| ||||||| ||||||||||| ||||  ||||||||||| |||||||    
T  35486440 tataatctataagctgttttcgcaagctatcctggagaggttatggaaatacgctgaaa 35486382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 301
Target Start/End: Complemental strand, 37419643 - 37419609
Alignment:
Q  267 caaagagtctcacaagtgcttatataagtagataa 301  Q
    |||||||| ||||||||||||||||||||||||||    
T  37419643 caaagagtttcacaagtgcttatataagtagataa 37419609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 38078480 - 38078414
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||| |||||||||| |||||||| | |||| |||||| |||| |||| |||| |||||||||||||    
T  38078480 tataggttgttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacat 38078414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 40158719 - 40158845
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaagag 273  Q
    |||||||||||||| ||| ||| || |||| |||||| || ||||||||||| ||||||| ||     |||||  || ||||||||||||  ||||  ||    
T  40158719 ataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcag 40158818  T
Q  274 tctcacaagtgcttatataagtagata 300  Q
    |||||||||| ||||| | ||||||||    
T  40158819 tctcacaagttcttatgtcagtagata 40158845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 41407603 - 41407668
Alignment:
Q  176 actataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac 242  Q
    ||||||||||| |||||  ||||||| | ||||||||||  |||||||||||||| |||||||||||    
T  41407603 actataagttggtttcatcagctatc-tggagaacttataaaaataagctgaaaacaacttatgaac 41407668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 42621452 - 42621386
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 237  Q
    ||||| ||||||| |||||||| ||| ||| || |||||||| || |||||||||||||| ||||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaacaactta 42621386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 43529907 - 43529797
Alignment:
Q  199 atcctagagaacttatggaaataagctgaaaataacttatgaa-----cataacatggtttcataagttcttccaaagagtctcacaagtgcttatataa 293  Q
    |||||||||| |||||| |||||| ||||||||| ||||||||     |||||  || |||||||| |||| ||||| ||| ||| |||||||||||  |    
T  43529907 atcctagagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttatacca 43529808  T
Q  294 gtagataagct 304  Q
     ||||||||||    
T  43529807 atagataagct 43529797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 45229517 - 45229563
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  45229517 ttgttttcataagctatcttcgagaacttatgaaaataagctgaaaa 45229563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 3611233 - 3611278
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  3611233 tgttttcacaagctatcttggagaacttatgaaaataagctaaaaa 3611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 5902540 - 5902503
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttat 289  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  5902540 tttcataagttcttccaaacagtctcacaagtgtttat 5902503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 7193926 - 7193865
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    |||| |||||||||| |||||| |||||  | | |||||||||||| |||||||||||||||    
T  7193926 tatagactataagttattttcataagctgccgtggagaacttatggcaataagctgaaaata 7193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 9530789 - 9530732
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||||| |||| |||||| || |||||| ||||||||||||| ||||    
T  9530789 ttttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacat 9530732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 30552715 - 30552662
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||| || |||||| || |||||||||||| |||||||||||||||| ||||    
T  30552715 ctataaattattttcataaactatcctagagagcttatggaaataagctaaaaa 30552662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 33931647 - 33931574
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||| |||||||| |||||||  | ||||| |  ||||||||||||||||  |||||||||||||    
T  33931647 tataagctataagctgttttcataagctattttggagaaatagtggaaataagctgaaataaacttatgaacat 33931574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 35378570 - 35378537
Alignment:
Q  210 cttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||| |||||||||||||||||||||||||||    
T  35378570 cttatgaaaataagctgaaaataacttatgaaca 35378537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 41170689 - 41170738
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataa 301  Q
    ||||||||||| ||||||| ||||||||||||| |||| | |||||||||    
T  41170689 tttcataagttattccaaatagtctcacaagtgtttatgttagtagataa 41170738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 41817177 - 41817234
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| || ||||||| |||| ||||||||||||||||||||| || |||| |||||    
T  41817177 ttttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacat 41817234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 42457959 - 42458008
Alignment:
Q  189 ttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||| |||||||| |||||||| |||| |||||||||||||| |||||||    
T  42457959 ttcataagctatcttagagaacatatgaaaataagctgaaaacaacttat 42458008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 43911068 - 43911003
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||| |||||||| | || | ||| ||  ||||||||||||| |||||||||||||    
T  43911068 ataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacat 43911003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 44443330 - 44443387
Alignment:
Q  187 ttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||||| | |||| | |||| |||||||||||||| |||||||||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacat 44443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 3059340 - 3059292
Alignment:
Q  182 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||| ||||||| |||||||  |||||||||||| |||||||    
T  3059340 agttgttttcataagctatgctagagagtttatggaaataaactgaaaa 3059292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 5781685 - 5781721
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||| |||||| |||||||||||||||||||||    
T  5781685 aagctatcatagagagcttatggaaataagctgaaaa 5781721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 17443589 - 17443549
Alignment:
Q  262 tcttccaaagagtctcacaagtgcttatataagtagataag 302  Q
    ||||||||| |||||||||||||||||||| |||| |||||    
T  17443589 tcttccaaacagtctcacaagtgcttatatcagtatataag 17443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 28039409 - 28039337
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||||   |||||| ||||| || | || || |||||||||||||||||||| | ||||||||||    
T  28039409 tataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatgaaca 28039337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 28933824 - 28933876
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| ||||||||| ||||||||||||||| || || |||||||| ||||||    
T  28933824 tataaattgttttcataagctatcctagagagctgatagaaataagttgaaaa 28933876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 32694212 - 32694264
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||| || ||||||||||||| |  || |||||||||||||||||    
T  32694212 tataagttgtttgcataagctatcctagatagattgtggaaataagctgaaaa 32694264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 40279268 - 40279332
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||||| |||||||  | ||||||||||| |||| ||||||||| |  |||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 40279338 - 40279402
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||||| |||||||  | ||||||||||| |||| ||||||||| |  |||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaaca 40279402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 41851534 - 41851598
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||||| |||||||| | ||||| ||||| || |||||||| || | ||||||||    
T  41851534 ctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaa 41851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 43141864 - 43141932
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| ||||||| |||||||| ||||||||||  |||  ||||||||||||  |||||| ||||||||    
T  43141864 tataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatg 43141932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 43199928 - 43199964
Alignment:
Q  266 ccaaagagtctcacaagtgcttatataagtagataag 302  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  43199928 ccaaacagtctcacaagtgcttatatgagtagataag 43199964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 4006707 - 4006781
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| |||||||||||||||| |||||||||  ||||  ||||| ||||||||||||||||||||||| |||||    
T  4006707 tataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacata 4006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 7931854 - 7931800
Alignment:
Q  183 gttgttttcacaagctatcctagagaacttatggaaataagctgaaaataactta 237  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  7931854 gttgttttcacaagctatcctatagagcttatggaaataagctgaaaacaactta 7931800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 281925 - 281858
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| ||||||| ||| |||| ||||||||||||||| || |||||||||||||||||| |||||||    
T  281925 tataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttat 281858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 2112193 - 2112266
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||||||||| || ||||| |||||  ||||| ||||||| | ||||| |||||||||||||    
T  2112193 tataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacat 2112266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 7931790 - 7931730
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||| ||||||||||| ||| |||| |||||||||||||||| |||||| ||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacat 7931730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 13907578 - 13907650
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    ||||| |||||||||||||||| |||| ||| | ||||| ||||| |||||| ||||||||||||| ||||||    
T  13907578 tataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaaca 13907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 2117396 - 2117455
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||    
T  2117396 tataatctataagttgttttcataagttatcctagagagcttattgaaataagctaaaaa 2117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 8010357 - 8010423
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||| | ||| |||||| |||||||||| ||||||| ||||||||| |||||||||||    
T  8010357 tataagctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacat 8010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 20368250 - 20368184
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| ||||| || | ||||||||||| ||||||| ||||| || |||||||||||    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacat 20368184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 33498626 - 33498675
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataac 234  Q
    |||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  33498626 tgttttcacaagttatcctgaaaaacttatggaaataagctgaaaataac 33498675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 4420645 - 4420709
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||  |||||||| | |||| ||||||||||||||||||||| | |||||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacat 4420709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 33558615 - 33558543
Alignment:
Q  179 ataagttgttttcacaagctatcctaga-gaacttatggaaataagctg-aaaataacttatgaacataacat 249  Q
    ||||||| |||||| ||||||||||  | || ||||||||||||||||| ||||||||||||||| |||||||    
T  33558615 ataagtttttttcataagctatccttaatgagcttatggaaataagctggaaaataacttatgaatataacat 33558543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 1275142 - 1275201
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| ||||||| |||||||| | | |||||| |||| |||||||||||||||||||||    
T  1275142 tataagctataagctgttttcatatgttatcctggagagcttatggaaataagctgaaaa 1275201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 6647394 - 6647453
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||| |||||||| |||||| |||||| ||||||| |||||| | |||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacat 6647453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 9093633 - 9093574
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| ||||||| |||||||| ||||| || ||||||||||| | ||||||||||||||    
T  9093633 tataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 19800513 - 19800454
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| ||||||||| ||| || ||||||||||||| || ||||| ||||||||||||||    
T  19800513 tataagctataagttttttacataagctatcctagaaaaattatgaaaataagctgaaaa 19800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 837287 - 837233
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaat 231  Q
    |||||||| |||||||  ||||||| | ||||||||||| |||||||||||||||    
T  837287 ctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaat 837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 6536979 - 6537013
Alignment:
Q  210 cttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||||||||| |||||||||||||    
T  6536979 cttatggaaataagctgaaaacaacttatgaacat 6537013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 8183145 - 8183211
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||||||||||| ||||| | |||||| ||| | ||| |||| | |||||||||||    
T  8183145 tataagttgttttcacaagctattctagaaagcttatgaaaacaggctaaaaacagcttatgaacat 8183211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 25100043 - 25100097
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 232  Q
    ||||||||||||||| |||||||| || ||| ||||| |||||||| ||||||||    
T  25100043 tataagttgttttcataagctatcttaaagagcttatagaaataagttgaaaata 25100097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 29957976 - 29957938
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaata 232  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  29957976 aagctattctagagagcttatggaaataagctgaaaata 29957938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 34430531 - 34430469
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatga 240  Q
    |||||| |||||||| |||||||| | ||||| ||||| |||||||||||||| | |||||||    
T  34430531 tataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 415297 - 415370
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||||||||| | |||||||  | ||||||||||||||  |||||||||| |  ||||||||||    
T  415297 tataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacat 415370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 835320 - 835267
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||  ||||||| |||||||| | ||||||||||| ||||||||||||||    
T  835320 ctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 2727933 - 2727896
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagaga 208  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  2727933 tataagctataagttgttttcataagctatcctagaga 2727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 17241329 - 17241256
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||||  ||||||  ||||||| | ||||  ||||||||||||| |||||| |||||||||||||    
T  17241329 tataatctataagtcattttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacat 17241256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 26559230 - 26559193
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttat 289  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  26559230 tttcataagttcttccaaacagtctcacaaatgcttat 26559193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 34403856 - 34403921
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||||||| ||||| | ||| ||| |||||||||||||| |||||| | |||||||||||    
T  34403856 ataagatgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacat 34403921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 769207 - 769255
Alignment:
Q  242 cataacatggtttcataagttcttccaaagagtctcacaagtgcttata 290  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||| |||||    
T  769207 cataagatgttttcataagttcatccaaacagtctcacaagtgtttata 769255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 2205654 - 2205610
Alignment:
Q  184 ttgttttcacaagctatcctagagaacttatggaaataagctgaa 228  Q
    ||||||||| |||||||| | |||| |||||||||||||||||||    
T  2205654 ttgttttcataagctatcttggagagcttatggaaataagctgaa 2205610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 3202024 - 3201956
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||||||||||| | | |||| |||||||| | || ||| ||||| ||||||||||||| ||||||||    
T  3202024 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacaacttatg 3201956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 9732476 - 9732528
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||||||| |||||| ||||  |||| ||| |||||||||||    
T  9732476 tataagttgttttcacaagttatccttgagagtttatagaagtaagctgaaaa 9732528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 10031808 - 10031860
Alignment:
Q  249 tggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataa 301  Q
    |||||||||| | |||| |||| |||||||||||||||||| | |||||||||    
T  10031808 tggtttcataggctctttcaaacagtctcacaagtgcttatgtcagtagataa 10031860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 14492301 - 14492365
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||| |||||||| ||| |||||||||||  || ||||||| ||||||||| || |||||||    
T  14492301 ctataagctgttttcataagttatcctagagagtttgtggaaatcagctgaaaacaatttatgaa 14492365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 18604652 - 18604616
Alignment:
Q  208 aacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  18604652 aacttatgcaaataagctcaaaataacttatgaacat 18604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 31671151 - 31671087
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataact 235  Q
    ||||| ||||||| |||||||  || |||||||||| | |||||| |||||||||||||| ||||    
T  31671151 tataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 33385618 - 33385658
Alignment:
Q  262 tcttccaaagagtctcacaagtgcttatataagtagataag 302  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  33385618 tcttccaaacagtttcacaagtgcttatatcagtagataag 33385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 34405104 - 34405136
Alignment:
Q  171 tataaactataagttgttttcacaagctatcct 203  Q
    ||||| |||||||||||||||||||||||||||    
T  34405104 tataacctataagttgttttcacaagctatcct 34405136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 29263371 - 29263437
Alignment:
Q  179 ataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||||||||| ||||||||||  ||| ||| ||||||||||||||||| ||||||||||||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacata 29263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 6466123 - 6466050
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||||||||| || ||||||| |||||||  ||||||||||||| |||||||| |||||||||||    
T  6466123 tataatctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaacat 6466050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 7694087 - 7694014
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||| |||||||| ||| |||||| ||||  |||||||||||||||||||| |||||||||||||    
T  7694087 tataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacat 7694014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 35405940 - 35406013
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||| |||||||||| ||| |||||| |||| ||||||||| ||||||||||| | |||||||||||    
T  35405940 tataaactataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaacagcttatgaacat 35406013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 18628606 - 18628492
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtg 284  Q
    |||||||| ||| |||| | |||| ||||||||||||||||||||| |||||     |||||  || ||||||||| ||| ||||| |||||||||||||    
T  18628606 tgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt-----cataagttgttttcataagctctcccaaacagtctcacaagtg 18628512  T
Q  285 cttatataagtagataagct 304  Q
     |||| | ||||||||||||    
T  18628511 tttatgtcagtagataagct 18628492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 24929492 - 24929559
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||| || || | ||||||| ||||||||||||||||||||| || ||||||||||    
T  24929492 ctataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaacat 24929559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 26747472 - 26747406
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||||  || ||||||| |||||||||||||||||||| |||| | |||||||||||    
T  26747472 tataagttgttttcattagttatcctaaagaacttatggaaataagctaaaaaaagcttatgaacat 26747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 1137706 - 1137823
Alignment:
Q  172 ataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat-----aacatggtttcataagttcttc 266  Q
    |||| ||||||| || ||||| || |||||| ||||| ||||||||||||| ||||||| |||||||||||||     || ||| ||||||||||||| |    
T  1137706 ataatctataagctgctttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcc 1137805  T
Q  267 caaagagtctcacaagtg 284  Q
     ||| ||| |||||||||    
T  1137806 taaacagtgtcacaagtg 1137823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 49202638 - 49202754
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaac------ataacatggtttcataagttct 264  Q
    ||||| |||||||||||||||  |||||||| | || |||| ||| ||||||| |||||| |||||||||||      ||||  |||||| |||||||||    
T  49202638 tataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttct 49202737  T
Q  265 tccaaagagtctcacaa 281  Q
    |||||| ||||||||||    
T  49202738 tccaaacagtctcacaa 49202754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 8469445 - 8469381
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||| |||||| ||| ||  ||||||||| ||||||||||||||||||| |||||||||||||    
T  8469445 taagtttttttcataagttagtctagagaacctatggaaataagctgaaaacaacttatgaacat 8469381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 11158427 - 11158375
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  11158427 tataagttgttttcataagctatcttagagagcttgtggaaataagctgaaaa 11158375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 11264301 - 11264353
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaa 11264353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 17822936 - 17822872
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||||| |||||||| | ||||||||||| ||||||||| |||| | ||||||||    
T  17822936 ctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaa 17822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 42866061 - 42866173
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacataac-----atggtttcataagttctt 265  Q
    ||||| |||||||||||||||| |||||||||| |||| ||||||||| |||||| |||  | |||||| ||||| |     ||| || ||||||||||     
T  42866061 tataagctataagttgttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacatatcatagaatgtttacataagttctc 42866160  T
Q  266 ccaaagagtctca 278  Q
    |||||||||||||    
T  42866161 ccaaagagtctca 42866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 49219132 - 49219200
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| |||||||||||||||| || ||||| || |||  |||||||||||||||||||| ||||||||    
T  49219132 tataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 5131304 - 5131253
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||| |||||    
T  5131304 aagctatcctggagagcttatggaaataagctgaaaacaacttatggacata 5131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 30207648 - 30207589
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||||||||||||||| |||||| | ||||||  ||||||||||||||||||||    
T  30207648 tataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaa 30207589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 36048526 - 36048593
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    ||||| ||||||| | |||||| |||||||| |||||| |||||||||||||||||| |||| |||||    
T  36048526 tataagctataagctattttcaaaagctatcttagagagcttatggaaataagctgacaatagcttat 36048593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 42121481 - 42121539
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    ||||| ||||||||||||||||  ||||||| | |||||||| ||||||||||||||||    
T  42121481 tataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaaa 42121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 2900333 - 2900390
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaa 228  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||||  ||||||||||||    
T  2900333 tataaactataagctgttttcacaagctatcatagagagattataaaaataagctgaa 2900390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 8468941 - 8469014
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| |||| ||||||||||| ||| ||| ||||||| |||||| |||||| ||||||| |||||||| ||||    
T  8468941 tataagctattagttgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttatggacat 8469014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 28614862 - 28614817
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||    
T  28614862 aagctatcctagagaacttatgaaaataagctgaaaagagcttatg 28614817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 29601071 - 29601026
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||    
T  29601071 tgttttcatatgctatcctagagaacttatgaaaataagctgaaaa 29601026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 22471353 - 22471401
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagata 300  Q
    ||||||||||||| ||||| |||||||||||||||||| | ||||||||    
T  22471353 tttcataagttctcccaaacagtctcacaagtgcttatgtcagtagata 22471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 50298598 - 50298646
Alignment:
Q  256 ataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||| ||||||| |||||||||||||||||| | ||||||||||||    
T  50298598 ataagtttttccaaacagtctcacaagtgcttatgtcagtagataagct 50298646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 53673721 - 53673661
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    |||||||| |||||||| | |||| |||||| |||||||||||||| |||||||| |||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacata 53673661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 55084549 - 55084485
Alignment:
Q  180 taagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    |||||||||||||  ||||||| |||||| |||||| |||||||||||||  | |||||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 55084485  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 17884072 - 17884135
Alignment:
Q  182 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||||||||| |||||||  | |||| |||||| |||| ||||||||| ||||||||||||||    
T  17884072 agttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacata 17884135  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 41603465 - 41603418
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  41603465 aagctatcatggagcacttatggaaataagctgaaaatagcttatgaa 41603418  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 51044597 - 51044506
Alignment:
Q  132 taagtgcttatgtataacctctttctttaacaaaata-actataaactataagttgttttcacaagctatcctagagaacttatggaaataa 222  Q
    |||||| |||||||||| || ||||| |||||||| | |  ||||| |  || ||||||||| |||||||||||||||||||||| ||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaacttgttttcataagctatcctagagaacttatgaaaataa 51044506  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 10192284 - 10192349
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||| |||||||||| |||| | |||| ||||||| |||||| |||||| ||||||    
T  10192284 tataagttgttttcaaaagctatcctggagagc-tatgaaaataagttgaaaacaacttacgaacat 10192349  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 20936306 - 20936232
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacata 245  Q
    ||||| ||||| |||||||||| |  ||||||| ||||  ||||||||||||| |||||| | ||||||||||||    
T  20936306 tataatctataggttgttttcatattctatcctggagagattatggaaataaggtgaaaacagcttatgaacata 20936232  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 244
Target Start/End: Original strand, 43824315 - 43824349
Alignment:
Q  210 cttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||||||||||||||||||| |||||||||||||    
T  43824315 cttatggaaataagctgaaaacaacttatgaacat 43824349  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 53943599 - 53943657
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaa 229  Q
    ||||||||||||||||||| || ||| | || | |||| ||||||||||||||||||||    
T  53943599 tataaactataagttgtttacataagttgtcatggagagcttatggaaataagctgaaa 53943657  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 18630673 - 18630722
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaat 220  Q
    ||||| |||||||||||||||||||||||||| | ||| |||||| ||||    
T  18630673 tataagctataagttgttttcacaagctatccaacagagcttatgaaaat 18630722  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 19429725 - 19429770
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||||| |||| ||||||||||||||||||||| | ||||||    
T  19429725 aagctatcctggagagcttatggaaataagctgaaaacagcttatg 19429770  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 20907340 - 20907413
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat 244  Q
    ||||| ||||||  |||||||||||||||||||  |||||  ||| ||||||| |||||| ||||||| |||||    
T  20907340 tataagctataaactgttttcacaagctatcctgaagaaccaatgaaaataagttgaaaacaacttataaacat 20907413  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 22662283 - 22662250
Alignment:
Q  212 tatggaaataagctgaaaataacttatgaacata 245  Q
    ||||||||||||||||||||| ||||||||||||    
T  22662283 tatggaaataagctgaaaatagcttatgaacata 22662250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 24371024 - 24370971
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||||||||||| ||||||||||| | |  |||| |||||||||||||||    
T  24371024 ctataagttgttttcataagctatcctaaatagtttatagaaataagctgaaaa 24370971  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 29563467 - 29563414
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttat 238  Q
    |||||||| ||||||| ||||||||||| ||| |||||| |||||| |||||||    
T  29563467 tgttttcagaagctattctagagaacttgtgggaataagttgaaaacaacttat 29563414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 31006025 - 31006070
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||| |||||||| |||| |||||| ||||||||||||||||    
T  31006025 tgttttcataagctatcatagataacttacggaaataagctgaaaa 31006070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 36734822 - 36734859
Alignment:
Q  129 atataagtgcttatgtataacctctttctttaacaaaa 166  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  36734822 atataagtgcttatgtataatctctttctataacaaaa 36734859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 1017111 - 1017159
Alignment:
Q  256 ataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||||||||| ||||||||||||| |||| | ||||||| ||||    
T  1017111 ataagttcttccaaacagtctcacaagtgtttatgtcagtagattagct 1017159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 2978031 - 2977995
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  2978031 aagctatcctagaaaacttatgaaaataagctgaaaa 2977995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 8147899 - 8147931
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatgga 217  Q
    |||||||| ||||||||||||||||||||||||    
T  8147899 tgttttcataagctatcctagagaacttatgga 8147931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 8422916 - 8422860
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctga 227  Q
    ||||| ||||||||||||||||||| ||||| | ||||  ||||| |||||||||||    
T  8422916 tataagctataagttgttttcacaatctatcttggagagtttatgcaaataagctga 8422860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 18019976 - 18020024
Alignment:
Q  182 agttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||||||||| ||||||| |||||||  |||||||||||| |||||||    
T  18019976 agttgttttcataagctatgctagagagtttatggaaataaactgaaaa 18020024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 24169270 - 24169326
Alignment:
Q  185 tgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    ||||||||||||||||| | |||| |||||| ||||||| |||||| | ||||||||    
T  24169270 tgttttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaa 24169326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 31038912 - 31038872
Alignment:
Q  203 tagagaacttatggaaataagctgaaaataacttatgaaca 243  Q
    |||||||||||| |||||||| |||||| ||||||||||||    
T  31038912 tagagaacttatagaaataagttgaaaacaacttatgaaca 31038872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 35507534 - 35507466
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    ||||| |||||||||||||||| |  |||||||| ||| |||||| || |||||| |||||| ||||||    
T  35507534 tataagctataagttgttttcatacactatcctaaagagcttatgaaagtaagctaaaaatagcttatg 35507466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 42641524 - 42641452
Alignment:
Q  217 aaataagctgaaaataacttatgaacataacatggtttcataagttcttccaaagagtctcacaagtgcttat 289  Q
    ||||||||||||||||  ||||||||||||  || |||||||||||||  |||| ||| ||| ||||| ||||    
T  42641524 aaataagctgaaaataggttatgaacataagctgttttcataagttctcgcaaacagtttcaaaagtgattat 42641452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 51560280 - 51560228
Alignment:
Q  252 tttcataagttcttccaaagagtctcacaagtgcttatataagtagataagct 304  Q
    ||||||||| ||| ||||||||||||| ||||||||||   ||||||||||||    
T  51560280 tttcataaggtctcccaaagagtctcataagtgcttatgccagtagataagct 51560228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 52734803 - 52734859
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataac 234  Q
    ||||||||||||||| |||||||| |  ||||| ||||||| |||||| ||||||||    
T  52734803 tataagttgttttcataagctatcatgaagaacatatggaactaagctaaaaataac 52734859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 53294185 - 53294121
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||||||||||| | || ||||  ||||||||||||| ||| |||||||||||| ||| ||||    
T  53294185 ctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaa 53294121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 55414491 - 55414427
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaa 241  Q
    |||||| ||||||||| ||| |||| | ||||||||||| ||||||| |||||| | ||||||||    
T  55414491 ctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaa 55414427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 306329 - 306387
Alignment:
Q  181 aagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatg 239  Q
    |||||||||||| ||||||||||||||| |||||| || ||||||||||| | ||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 160043 - 159991
Alignment:
Q  178 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||    
T  160043 tataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaaa 159991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 178402 - 178343
Alignment:
Q  171 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaa 230  Q
    ||||| |||| || ||||||||||||| ||| | ||||||||||| ||||||||||||||    
T  178402 tataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaa 178343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 17275 - 17323
Alignment:
Q  177 ctataagttgttttcacaagctatcctagagaacttatggaaataagct 225  Q
    |||||||||||||||| |||||||| | |||||||||| | ||||||||    
T  17275 ctataagttgttttcataagctatcttggagaacttatagcaataagct 17323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 27017 - 27053
Alignment:
Q  194 aagctatcctagagaacttatggaaataagctgaaaa 230  Q
    |||||||| |||||| |||||||||||||||||||||    
T  27017 aagctatcatagagagcttatggaaataagctgaaaa 27053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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