View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14115_low_34 (Length: 250)
Name: NF14115_low_34
Description: NF14115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14115_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 26450426 - 26450301
Alignment:
| Q |
23 |
ggaagctgtaacagtaggaaatccagattccataactgatcc-ataacccattttactattcacattaacctctaagttttt-atcaaatagacaagcac |
120 |
Q |
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|||||||| ||||| || ||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||||||| || |||||||||||||| |
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| T |
26450426 |
ggaagctgcaacagcagaaaatccagattccataatcgatcccataatccattttaaaattcacattaacctctaagttttttattaaatagacaagcac |
26450327 |
T |
|
| Q |
121 |
ttttcttttttattaacacaactaac |
146 |
Q |
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||||||||||||||||||||| |||| |
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| T |
26450326 |
ttttcttttttattaacacaattaac |
26450301 |
T |
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