View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14116_low_10 (Length: 250)
Name: NF14116_low_10
Description: NF14116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14116_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 25626491 - 25626269
Alignment:
| Q |
17 |
actttgaacatgcaactatgttcatacaccttgctttatttgccggtttttcactcttaaccgaattaaccgattcacttgaactcttctctggatttgt |
116 |
Q |
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| T |
25626491 |
actttgaacatgcaactatgttcatacaccttgctttatttgccggtttttcactcttaaccgaattaaccgattcgcttgaactcttctctggatttgt |
25626392 |
T |
|
| Q |
117 |
tggcatacttgtatcctcagttttcagtcaagagcttttcttacttcattttcattccactgatcatgttggacctgaaggtcattaccactggctgcta |
216 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25626391 |
tgccatacttgtatcctcagttttcagtcaagagcttttcttacttcattttcattccactgatcatgttggacctgaaggtcattaccactggctgcta |
25626292 |
T |
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| Q |
217 |
cagctcatagtttttgtctctct |
239 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
25626291 |
cagctcatagtttttgtctctct |
25626269 |
T |
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