View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14117_high_4 (Length: 705)

Name: NF14117_high_4
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14117_high_4
NF14117_high_4
[»] chr8 (34 HSPs)
chr8 (190-372)||(10284549-10284731)
chr8 (194-372)||(12831047-12831225)
chr8 (194-372)||(504043-504221)
chr8 (194-377)||(34012218-34012401)
chr8 (194-372)||(23122519-23122697)
chr8 (212-372)||(44507027-44507187)
chr8 (194-365)||(14547929-14548100)
chr8 (193-372)||(40423864-40424043)
chr8 (194-372)||(15197333-15197511)
chr8 (190-372)||(37038479-37038661)
chr8 (191-367)||(5957835-5958011)
chr8 (185-353)||(8841345-8841513)
chr8 (189-372)||(15048098-15048281)
chr8 (189-372)||(43414498-43414681)
chr8 (227-373)||(1179895-1180041)
chr8 (190-372)||(4854781-4854963)
chr8 (194-372)||(30479396-30479574)
chr8 (188-377)||(15258845-15259034)
chr8 (193-372)||(16056322-16056501)
chr8 (232-370)||(10621047-10621185)
chr8 (212-328)||(9122229-9122345)
chr8 (194-382)||(24307715-24307903)
chr8 (194-372)||(34307216-34307394)
chr8 (228-372)||(16383377-16383521)
chr8 (187-320)||(42354503-42354636)
chr8 (203-373)||(14055523-14055693)
chr8 (221-372)||(42221515-42221666)
chr8 (189-379)||(20074869-20075041)
chr8 (192-372)||(17443825-17444005)
chr8 (190-372)||(32032725-32032906)
chr8 (190-300)||(40467772-40467882)
chr8 (190-276)||(32707921-32708007)
chr8 (212-276)||(42710234-42710298)
chr8 (313-372)||(24307629-24307688)
[»] chr3 (46 HSPs)
chr3 (375-500)||(29555090-29555214)
chr3 (11-119)||(29555247-29555355)
chr3 (187-367)||(30801648-30801828)
chr3 (221-368)||(52629304-52629451)
chr3 (194-372)||(53982011-53982189)
chr3 (189-373)||(8076392-8076576)
chr3 (189-372)||(33118767-33118951)
chr3 (194-372)||(33644200-33644378)
chr3 (194-372)||(54868817-54868995)
chr3 (194-372)||(17470405-17470583)
chr3 (187-372)||(20764830-20765015)
chr3 (187-372)||(35536626-35536811)
chr3 (194-372)||(49607414-49607592)
chr3 (224-367)||(31456694-31456837)
chr3 (188-374)||(51419276-51419462)
chr3 (187-377)||(26141445-26141637)
chr3 (187-372)||(41189679-41189864)
chr3 (190-372)||(11347840-11348022)
chr3 (190-372)||(14623757-14623939)
chr3 (187-369)||(26754698-26754880)
chr3 (194-372)||(36707350-36707524)
chr3 (188-372)||(45058469-45058652)
chr3 (190-372)||(8956762-8956944)
chr3 (194-367)||(48587023-48587186)
chr3 (118-189)||(29555212-29555283)
chr3 (190-372)||(35965700-35965874)
chr3 (188-369)||(42823114-42823295)
chr3 (212-372)||(9562999-9563159)
chr3 (187-373)||(47531864-47532050)
chr3 (187-352)||(13897970-13898135)
chr3 (187-372)||(24699870-24700054)
chr3 (269-372)||(27714888-27714991)
chr3 (296-382)||(11095377-11095463)
chr3 (246-372)||(48375680-48375806)
chr3 (256-372)||(11907371-11907487)
chr3 (573-621)||(29554974-29555022)
chr3 (222-364)||(39670019-39670161)
chr3 (187-331)||(1758374-1758515)
chr3 (221-342)||(36331278-36331399)
chr3 (190-372)||(35093585-35093767)
chr3 (246-374)||(41080707-41080833)
chr3 (293-352)||(43745766-43745825)
chr3 (194-254)||(11095289-11095349)
chr3 (221-286)||(21746137-21746202)
chr3 (187-276)||(43746435-43746524)
chr3 (256-352)||(45320390-45320486)
[»] chr2 (38 HSPs)
chr2 (203-372)||(33436031-33436200)
chr2 (194-372)||(10249304-10249482)
chr2 (194-372)||(13438343-13438521)
chr2 (194-372)||(32505570-32505748)
chr2 (221-372)||(30915463-30915614)
chr2 (190-372)||(20700815-20700997)
chr2 (194-367)||(28863460-28863633)
chr2 (212-372)||(9058480-9058640)
chr2 (194-372)||(17473020-17473198)
chr2 (194-372)||(40701478-40701656)
chr2 (194-367)||(19930742-19930915)
chr2 (194-372)||(7465657-7465835)
chr2 (221-372)||(4060685-4060836)
chr2 (189-372)||(40613819-40614002)
chr2 (190-372)||(36168836-36169018)
chr2 (194-377)||(28381577-28381760)
chr2 (189-372)||(42257193-42257376)
chr2 (187-372)||(38732354-38732539)
chr2 (212-372)||(38882751-38882913)
chr2 (244-372)||(26891476-26891604)
chr2 (189-372)||(2533124-2533306)
chr2 (190-372)||(43490121-43490303)
chr2 (263-372)||(5574479-5574588)
chr2 (190-372)||(38273061-38273242)
chr2 (212-372)||(27864704-27864851)
chr2 (229-372)||(17819961-17820104)
chr2 (187-355)||(2997402-2997570)
chr2 (187-341)||(41758616-41758772)
chr2 (188-366)||(3439985-3440163)
chr2 (187-372)||(33436211-33436386)
chr2 (191-287)||(44152012-44152108)
chr2 (221-372)||(45097684-45097835)
chr2 (189-372)||(13365351-13365536)
chr2 (232-367)||(41575142-41575278)
chr2 (190-329)||(3737986-3738125)
chr2 (189-286)||(17823874-17823971)
chr2 (190-318)||(3034901-3035029)
chr2 (203-278)||(2329352-2329431)
[»] chr1 (34 HSPs)
chr1 (194-372)||(9474798-9474976)
chr1 (190-372)||(32813247-32813429)
chr1 (212-372)||(2581915-2582075)
chr1 (194-372)||(27564657-27564835)
chr1 (194-372)||(41758805-41758983)
chr1 (190-372)||(51898601-51898783)
chr1 (203-372)||(50630458-50630627)
chr1 (221-373)||(3000318-3000470)
chr1 (194-372)||(48716204-48716382)
chr1 (212-372)||(38632261-38632421)
chr1 (221-372)||(38595154-38595305)
chr1 (187-377)||(45044475-45044665)
chr1 (194-372)||(47452242-47452420)
chr1 (212-372)||(43132-43292)
chr1 (188-372)||(5958916-5959100)
chr1 (223-346)||(13414787-13414910)
chr1 (192-372)||(49811447-49811627)
chr1 (194-372)||(37649198-37649376)
chr1 (212-372)||(8346327-8346488)
chr1 (190-371)||(44453980-44454165)
chr1 (239-367)||(44548343-44548471)
chr1 (190-372)||(50590918-50591100)
chr1 (187-352)||(11152293-11152458)
chr1 (188-372)||(47748443-47748626)
chr1 (212-372)||(7740733-7740893)
chr1 (194-367)||(26274437-26274607)
chr1 (190-372)||(37926356-37926538)
chr1 (192-372)||(23597011-23597191)
chr1 (190-372)||(6260870-6261052)
chr1 (190-372)||(41608411-41608593)
chr1 (221-378)||(3302482-3302639)
chr1 (188-372)||(26440734-26440908)
chr1 (190-331)||(44332289-44332430)
chr1 (192-300)||(34339968-34340075)
[»] scaffold0110 (1 HSPs)
scaffold0110 (188-372)||(8779-8963)
[»] chr4 (37 HSPs)
chr4 (194-372)||(6034044-6034222)
chr4 (194-372)||(48182971-48183149)
chr4 (188-372)||(31910192-31910376)
chr4 (221-372)||(480396-480547)
chr4 (194-373)||(41236346-41236525)
chr4 (189-372)||(50052345-50052528)
chr4 (194-372)||(24995029-24995207)
chr4 (187-372)||(29239886-29240071)
chr4 (221-372)||(11511411-11511562)
chr4 (221-372)||(42044316-42044467)
chr4 (212-372)||(54473473-54473633)
chr4 (189-372)||(50526088-50526271)
chr4 (190-334)||(41823920-41824064)
chr4 (232-372)||(29234205-29234345)
chr4 (192-372)||(40574779-40574959)
chr4 (187-372)||(19670631-19670816)
chr4 (191-372)||(48647645-48647826)
chr4 (188-372)||(3481654-3481828)
chr4 (212-372)||(23608235-23608395)
chr4 (190-372)||(50813810-50813992)
chr4 (190-372)||(55475191-55475373)
chr4 (187-372)||(47986208-47986392)
chr4 (187-355)||(17983658-17983826)
chr4 (189-379)||(29547876-29548066)
chr4 (246-368)||(53352540-53352661)
chr4 (188-372)||(28480184-28480368)
chr4 (188-372)||(28481059-28481243)
chr4 (188-372)||(28481934-28482118)
chr4 (192-372)||(29977885-29978065)
chr4 (193-345)||(47104571-47104723)
chr4 (238-373)||(8343129-8343264)
chr4 (189-372)||(32766958-32767141)
chr4 (184-372)||(18924407-18924595)
chr4 (187-342)||(29589655-29589810)
chr4 (189-372)||(44536663-44536845)
chr4 (193-276)||(56300086-56300169)
chr4 (238-372)||(55079679-55079814)
[»] chr7 (40 HSPs)
chr7 (189-372)||(21234401-21234584)
chr7 (221-372)||(38267040-38267191)
chr7 (194-372)||(8080305-8080483)
chr7 (190-372)||(46033719-46033901)
chr7 (216-372)||(35137533-35137689)
chr7 (221-372)||(38837217-38837368)
chr7 (194-372)||(4999436-4999614)
chr7 (194-372)||(19329842-19330020)
chr7 (203-372)||(19436118-19436287)
chr7 (221-372)||(40957707-40957858)
chr7 (212-386)||(7389375-7389548)
chr7 (187-371)||(35522877-35523061)
chr7 (228-367)||(3784000-3784139)
chr7 (213-367)||(32951434-32951588)
chr7 (187-372)||(8238212-8238398)
chr7 (221-367)||(3694372-3694518)
chr7 (190-372)||(26296644-26296826)
chr7 (190-372)||(38044197-38044379)
chr7 (194-372)||(11044188-11044356)
chr7 (190-372)||(22343361-22343543)
chr7 (190-372)||(41423682-41423864)
chr7 (239-372)||(36208173-36208306)
chr7 (263-372)||(36361904-36362013)
chr7 (194-372)||(36362026-36362192)
chr7 (191-343)||(16374743-16374895)
chr7 (192-372)||(41915741-41915921)
chr7 (194-372)||(3434562-3434730)
chr7 (189-372)||(31735884-31736060)
chr7 (188-338)||(27744225-27744375)
chr7 (190-372)||(35468773-35468955)
chr7 (187-372)||(32564341-32564526)
chr7 (187-372)||(40846028-40846213)
chr7 (192-372)||(7727906-7728086)
chr7 (212-372)||(18207180-18207339)
chr7 (192-372)||(39255844-39256023)
chr7 (191-331)||(2318160-2318302)
chr7 (280-374)||(46374810-46374904)
chr7 (189-254)||(46374741-46374806)
chr7 (191-329)||(32045880-32046018)
chr7 (194-254)||(36361847-36361907)
[»] chr5 (30 HSPs)
chr5 (194-377)||(33149560-33149743)
chr5 (194-372)||(2740274-2740452)
chr5 (194-367)||(18520806-18520979)
chr5 (192-372)||(35943812-35943992)
chr5 (194-372)||(35785199-35785377)
chr5 (203-372)||(36732873-36733042)
chr5 (203-365)||(13811659-13811821)
chr5 (194-372)||(14831814-14831992)
chr5 (190-372)||(15409528-15409710)
chr5 (194-372)||(40145407-40145585)
chr5 (189-372)||(31008988-31009171)
chr5 (191-372)||(6679698-6679879)
chr5 (237-372)||(28177775-28177910)
chr5 (188-372)||(26720516-26720700)
chr5 (188-372)||(26990265-26990449)
chr5 (188-300)||(2177436-2177548)
chr5 (188-372)||(3921181-3921365)
chr5 (189-372)||(2252085-2252268)
chr5 (187-372)||(6259916-6260101)
chr5 (189-345)||(20073433-20073589)
chr5 (245-372)||(42414275-42414402)
chr5 (189-377)||(39688814-39689002)
chr5 (224-367)||(36875564-36875698)
chr5 (191-372)||(33825243-33825424)
chr5 (190-328)||(21370048-21370186)
chr5 (192-372)||(9603813-9603993)
chr5 (281-364)||(41470425-41470508)
chr5 (262-324)||(31132392-31132454)
chr5 (267-352)||(16327921-16328006)
chr5 (578-618)||(42779650-42779690)
[»] chr6 (22 HSPs)
chr6 (194-365)||(32869685-32869856)
chr6 (212-367)||(22880598-22880753)
chr6 (194-372)||(17598554-17598732)
chr6 (190-372)||(31976248-31976430)
chr6 (194-372)||(11427616-11427796)
chr6 (194-372)||(15832577-15832755)
chr6 (221-367)||(23128076-23128222)
chr6 (229-372)||(6209422-6209565)
chr6 (187-372)||(31952945-31953130)
chr6 (194-372)||(29857827-29858005)
chr6 (189-372)||(30341277-30341460)
chr6 (190-372)||(15989960-15990142)
chr6 (187-372)||(15507939-15508124)
chr6 (223-360)||(31109351-31109488)
chr6 (190-372)||(31110679-31110859)
chr6 (190-372)||(4231548-4231730)
chr6 (205-365)||(946383-946543)
chr6 (212-367)||(28536428-28536581)
chr6 (240-368)||(9379680-9379808)
chr6 (203-328)||(30870058-30870183)
chr6 (250-372)||(12732482-12732604)
chr6 (190-235)||(22421997-22422042)
[»] scaffold0321 (1 HSPs)
scaffold0321 (221-372)||(10058-10209)
[»] scaffold1268 (1 HSPs)
scaffold1268 (191-372)||(848-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (191-372)||(848-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (194-372)||(4029-4207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (191-342)||(152528-152679)
[»] scaffold0316 (1 HSPs)
scaffold0316 (263-342)||(17084-17163)


Alignment Details
Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 10284549 - 10284731
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||| ||||||||| |||||||| |||||||||||| | ||||||||||    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcg 10284648  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  10284649 gggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 12831225 - 12831047
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  12831125 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 504043 - 504221
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  | |||||||||| |||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 194 - 377
Target Start/End: Original strand, 34012218 - 34012401
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  ||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| |||| ||||    
T  34012318 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaa 34012401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 23122519 - 23122697
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||| | ||||| ||||||||| | ||||| |||| |||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 212 - 372
Target Start/End: Original strand, 44507027 - 44507187
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||    
T  44507027 tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtca 44507126  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||||||| |||| |||||||  ||| ||||||| |||||||||||| ||||    
T  44507127 gatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 194 - 365
Target Start/End: Complemental strand, 14548100 - 14547929
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 365  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| ||||||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 193 - 372
Target Start/End: Original strand, 40423864 - 40424043
Alignment:
Q  193 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg 292  Q
    ||||| ||| ||||||| ||||||||  ||||||||||||||| | |||| ||||||||||| ||||| ||||| ||||||||| | |||||||||| ||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  293 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  40423964 tccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 15197511 - 15197333
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| ||||||||  ||||||||||||||| | |||||||| |||||||  |||| ||||| ||||||||| | |||||||||| |||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |||| || |||||||||||| ||||    
T  15197411 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 37038661 - 37038479
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  ||||||  |||||||||||||||| |||||||| ||||||||| ||||| ||||||||| ||||| | ||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||| | | |||||||||||| ||||    
T  37038561 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 191 - 367
Target Start/End: Complemental strand, 5958011 - 5957835
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| || ||||  |||||||| ||||||||||||||| | |||||| ||||||||| ||||| ||||||||||||||| | || |||||||     
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    | ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||  | ||||||||||||    
T  5957911 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 185 - 353
Target Start/End: Original strand, 8841345 - 8841513
Alignment:
Q  185 tcaaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgctt 284  Q
    |||| |||||||||||| |||||||  |||||||| |||||| |||||||| |||||||| |||||| || ||||| ||||||||||||||| | |||||    
T  8841345 tcaatggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgctt 8841444  T
Q  285 gtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaaggg 353  Q
    ||||| ||||||||||||||||||| | |||||| |||||||||||||||||||| || ||| ||||||    
T  8841445 gtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 15048098 - 15048281
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgaga-ggaaagagaaaatatgcttgtg 287  Q
    ||||||||||||  |||||||  |||||||  ||||||||||||||||||||| |||||||||||| ||||| ||||   ||||||||| | ||||||||    
T  15048098 aggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtg 15048197  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || |||||| ||| |||||||||| |||||| ||| ||||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  15048198 cggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 43414498 - 43414681
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| |||||||  ||||||   ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | |||||||||    
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 43414597  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | | |||| ||||| |||||| | |||||| ||||||||||||||||||| ||| ||  ||||| | |||||||||||||||||    
T  43414598 gggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 373
Target Start/End: Original strand, 1179895 - 1180041
Alignment:
Q  227 ccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggt 326  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | ||||||||||   ||||| ||||||||||||| |||||| |||||||    
T  1179895 ccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggt 1179994  T
Q  327 gtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 373  Q
    |||||||||||||||  ||| ||||||| |||||||||||| |||||    
T  1179995 gtcaaagggtgtattaccacctaagggtgtctatgtatcattactcg 1180041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 4854781 - 4854963
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||| ||| ||||||||||||||||| |||||| ||||| ||||| ||||| ||||||||| | |||||||||     
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||| | || | ||| |||||||||| ||||| ||||||||||||| ||| ||||| | |||||||||||| ||||    
T  4854881 gggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 30479396 - 30479574
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | ||||||||||||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggt 30479495  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||  |  | || ||||| |||||||||||| ||||||||||||||||| ||| ||||||| | |||||||||||||||    
T  30479496 ccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 188 - 377
Target Start/End: Original strand, 15258845 - 15259034
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  ||||||   ||||||  |||||||||| ||    ||||||||| ||||| ||||||||||||||||| ||||||||    
T  15258845 aaggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 15258944  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    |  |||||||||||| || ||||| |||||||||||| |||| | || ||||||| ||  |||| || ||||||||||||||||| ||||    
T  15258945 cagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactcttaaa 15259034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 193 - 372
Target Start/End: Original strand, 16056322 - 16056501
Alignment:
Q  193 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg 292  Q
    ||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  293 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||  || | || ||||| |||||| |||||||||||| || ||||||||||| ||||| | | |||||||||||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 232 - 370
Target Start/End: Original strand, 10621047 - 10621185
Alignment:
Q  232 tacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 331  Q
    ||||||||||  ||||||||||| ||||| ||||| ||||||||| | |||||||||| | || | ||| |||||||||| |||||| ||||||||||||    
T  10621047 tacatcccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaa 10621146  T
Q  332 agggtgtattgtcacttaagggtttctatgtatcataac 370  Q
    ||||||||||  ||| ||||| | |||||||||||||||    
T  10621147 agggtgtattaccacctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 328
Target Start/End: Complemental strand, 9122345 - 9122229
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | ||||||||||||| |||||    
T  9122345 tttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtca 9122246  T
Q  312 aatttttatgtgggtgt 328  Q
     |||||| |||||||||    
T  9122245 gatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 194 - 382
Target Start/End: Original strand, 24307715 - 24307903
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| |||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaattaat 382  Q
    |||  || | || | ||| |||||| |||||||||||| || ||||||| ||| ||||||| | ||||||||||||||| |||| ||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactcttaaaataat 24307903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 34307394 - 34307216
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||| |||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 228 - 372
Target Start/End: Complemental strand, 16383521 - 16383377
Alignment:
Q  228 cttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtg 327  Q
    |||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||||||  || | || ||||| |||||| ||||||||    
T  16383521 cttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtg 16383422  T
Q  328 tcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||| |||||||||| ||| ||||||| | |||||||||||||||    
T  16383421 tcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 42354503 - 42354636
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  |||||||| |||||||||| |||| |||||||| ||||||||| |||||  ||| |||||||||| | ||||| |    
T  42354503 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgcttat 42354602  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    | ||| ||||| |||  |||||||| ||||||||    
T  42354603 gtgagatccacatgaacacgtgtcagatttttat 42354636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 203 - 373
Target Start/End: Original strand, 14055523 - 14055693
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc-gaggtccacgtga 301  Q
    |||||||  |||||||| ||||||| ||||| | | ||| ||||| |||||| |||||| |||||||||| ||| |  |||||||  | |||||||||||    
T  14055523 tagacactatttattctcatacacctttgtatacctcattcattaagaagagagaagatcagaggaaagaaaaagtg-gcttgtgtaggggtccacgtga 14055621  T
Q  302 ctacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 373  Q
    |||| ||| | |||||| ||||| |||||| | |||||||||||| ||||||| || |||||||||||||||    
T  14055622 ctacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactcg 14055693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 42221666 - 42221515
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| || ||  ||| ||||||| |||||||||| |||||||||| | |||||||  | ||||||  ||| ||||||||| |||||| |    
T  42221666 atacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgt 42221567  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||| | |  ||||||||||| ||||| | | |||||||||| ||||    
T  42221566 gtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 379
Target Start/End: Original strand, 20074869 - 20075041
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||||||||||||| |||||||           |||| | ||||||||| |||||  |||||||||||||| | |||||||||    
T  20074869 aggaaaatgttacatagacacattttattctcatacacct----------catgaactaggaagagagaagagaagaggaaagagaaagtgtgcttgtgc 20074958  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaatt 379  Q
      ||||||||||        ||| ||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||| |||| ||||||    
T  20074959 agggtccacgtg--------tcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcataaatt 20075041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 17444005 - 17443825
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| |||||||  |||||    ||||| ||||||||| | |||||| | ||||||| |||||  ||| |||||||||| | |  ||||| | |    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | |||||||||||||||||    
T  17443905 gtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 32032906 - 32032725
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||  |||||||||| | | |||||||     
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | ||||  || | || ||||| |||||| ||||| |||| |||| ||||||| ||| ||||||| | |||||||||||||||    
T  32032806 ggatccatatggccacatgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 40467882 - 40467772
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| |||||| |  ||| |   ||||||| |||||  | ||||||||| ||||||||||||||||||||| | ||||||||||    
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcg 40467783  T
Q  290 aggtccacgtg 300  Q
    | |||||||||    
T  40467782 aagtccacgtg 40467772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 32707921 - 32708007
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 276  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| ||||||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaa 32708007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 42710234 - 42710298
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 276  Q
    |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||    
T  42710234 tttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaa 42710298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 24307688 - 24307629
Alignment:
Q  313 atttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| |||||||||||| || ||||||| ||| ||||||| | |||||||||||||||    
T  24307688 atttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 2e-57; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 29555214 - 29555090
Alignment:
Q  375 aaattaataacacaacatattcataaattcaccaattcatggagacattcaaagttcaaacaaaatcactttgcaaagtcttcgaaatccatcttgcgat 474  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29555214 aaattaataacacaacatattcataaattcaccaattcatggagacattcaaagttcaaacaaaatcaccttgcaaagtctt-gaaatccatcttgcgat 29555116  T
Q  475 ccaaaatttcttttagcaccggaggc 500  Q
    ||||||||||||||||||||||||||    
T  29555115 ccaaaatttcttttagcaccggaggc 29555090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 29555355 - 29555247
Alignment:
Q  11 caaaggagagacgcaatgagagacaaacaaaaaactgacccaagccacaccaaatcaattagcttttcaccaaatacaatagaaccgtatcgtgttgtcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29555355 caaaggagagacgcaatgagagacaaacaaaaaactgacccaagccacaccaaatcaattagcttttcaccaaatacaatagaaccgtatcgtgttgtcc 29555256  T
Q  111 aaataccaa 119  Q
    |||||||||    
T  29555255 aaataccaa 29555247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 187 - 367
Target Start/End: Original strand, 30801648 - 30801828
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||| |||||||    
T  30801648 aaaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgt 30801747  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    | | ||||||  ||||||| ||||| |||||| ||||||| |||||||||||||| |||| ||||||| ||||||||||||    
T  30801748 gtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 52629451 - 52629304
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  52629451 atacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 52629352  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcata 368  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  52629351 gtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 53982189 - 53982011
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 373
Target Start/End: Complemental strand, 8076576 - 8076392
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| |||||||  |||||||| ||||||  ||||||| |||||||| ||||||||| ||||| ||||||||||||||| | |||||||||    
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 8076477  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 373  Q
    | ||||||||||||||||||| | |||||| |||||||||||||||||||| || ||| ||||||| | |||||||||| |||||    
T  8076476 ggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactcg 8076392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 33118767 - 33118951
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaag-atgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||||||||||  ||||||   ||||||||||||||| |||||||| |||| |||| |||| | ||||||||||||||| | || || ||    
T  33118767 aggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctg 33118866  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  33118867 agggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 33644378 - 33644200
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  |||||||||| |||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||  |||||| |||||||||||| ||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 54868817 - 54868995
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 17470583 - 17470405
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| |||||   |||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||| | |||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||| ||| ||||||||| ||| ||| ||| |||||||||||| ||||    
T  17470483 ccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 20764830 - 20765015
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  |||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||| | |||||||    
T  20764830 aaaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 20764929  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     || |||||| ||| | |||||||| |||||| ||||||||| |||| |||||||  ||| ||||| | ||||||| |||||||||    
T  20764930 acggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 35536811 - 35536626
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  |||||||| |||||||||| |||| |||||||| ||||||||| |||||  ||| ||||||| || | |||||||    
T  35536811 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgt 35536712  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |  |||||||| |||| |||||||| |||||||||||||||||||| ||||||||| ||| ||||| | |||||||||||| ||||    
T  35536711 gtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 49607592 - 49607414
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  |||||||||||||||   ||||||||||||||||  |||| ||||| ||||||||| | |||||||| | | |    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 31456837 - 31456694
Alignment:
Q  224 cacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtg 323  Q
    |||||||||||| ||||||||||||||||||  |||| ||||| ||||||||| | |||||||||| ||||||| ||||||||||||| |||||| ||||    
T  31456837 cacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtg 31456738  T
Q  324 ggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    ||||||||||||||||||| | | || |||| ||||||||||||    
T  31456737 ggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 188 - 374
Target Start/End: Original strand, 51419276 - 51419462
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| || |||| |||||||   ||||||||||||||| ||||| |||||||||||| ||| | ||||| ||||||||| | ||||||||    
T  51419276 aaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 51419375  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgt 374  Q
    || |||| | ||| | |||||||| |||||| ||||||||| ||||| ||||||||||  ||||| | |||||||||||||||||||    
T  51419376 cggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactcgt 51419462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 187 - 377
Target Start/End: Original strand, 26141445 - 26141637
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagg--gaagatgagaggaaagagaaaatatgctt 284  Q
    ||||||||||||||| |||||||  ||||||   |||||| |||||||| ||||| ||||||||||||   ||||| ||||| ||||||||| | |||||    
T  26141445 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgctt 26141544  T
Q  285 gtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    ||| | |||||| ||||| |||||||| |||||| ||||||||| ||||||||||||| ||| ||||| | ||||||||||||||||| ||||    
T  26141545 gtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcataaa 26141637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 41189679 - 41189864
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  ||||||   |||||| ||||||||  |||| |||||||||||  ||||| ||||| ||||||||| | |||||||    
T  41189679 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgt 41189778  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| |||||| ||| | ||||||||||||||||||||||||||||| | ||||||| ||| ||||| | | |||||||||||||||    
T  41189779 gcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 11347840 - 11348022
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||| ||| |||||||  |||||||  |||||||||| |||| ||||| |||||||||||| ||||| ||||| ||||||||| | ||||| |||     
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgca 11347939  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||| | |||||||| |||||| ||||| ||||||||| ||||||||||| ||||| | |||||||||||||||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 14623757 - 14623939
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||| ||||| |||| |||| | |||||| ||| ||||| |||||  ||| |||||||||| | |||||||| |    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||| |||  || ||||| ||||||||||||||||||| |||||||||| ||| ||||| | |||||||||||| ||||    
T  14623857 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 187 - 369
Target Start/End: Complemental strand, 26754880 - 26754698
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  ||||||   ||||||| ||||||| || ||    ||||||||| ||||| ||||||||||||||||| |||||||    
T  26754880 aaaggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgt 26754781  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataa 369  Q
    ||| |||||| ||||| || ||||| |||||| ||||| |||| |||||||||||| ||| ||||||| |||||| |||||||    
T  26754780 gcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 36707350 - 36707524
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| ||||||||  |||||  |||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |||    ||| | |    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgc----gcgggat 36707445  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||||||| |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  36707446 ccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 45058469 - 45058652
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| ||||||| ||||| |   ||||||| ||||||| |||||| ||||||||||| |||||  ||| |||||||||| ||| ||||||    
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 45058568  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || ||||||  ||   || ||||| ||||||||||||||||| |||||||||||| ||| ||||||| | |||||||||||||||    
T  45058569 cggggtccatatggtcacatgtcagatttttatgtgggtgtc-aagggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 8956944 - 8956762
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||   |||||||| |||||||||| |||| ||  |||| ||||||||| |||||  ||| ||||||| || | ||||||||      
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgta 8956845  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||| |||  |||||||| |||||||||||||||||||||| ||||||| ||| ||||| | |||||||||||| ||||    
T  8956844 aggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 367
Target Start/End: Original strand, 48587023 - 48587186
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||| |||||||||||||||||||||||||||||| |||          |||||||| | | |||||||| | |    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagagagaa----------aagagaaagtgtacttgtgcgggat 48587112  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  48587113 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 29555283 - 29555212
Alignment:
Q  118 aatacaatagaacagtatcgtgttgtccaaataccaagagaacaaacccaataaatgagactatccatcaaa 189  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29555283 aatacaatagaaccgtatcgtgttgtccaaataccaagagaacaaacccaataaatgaaactatccatcaaa 29555212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 35965700 - 35965874
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||| | |||| |||| ||| ||  |||| ||||||||||||||| | |||||||||     
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgca 35965799  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | |||        |||||||| |||||||||||||||||||||| |||||| |||||||||| | | |||||||||| ||||    
T  35965800 ggatcc--------acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 369
Target Start/End: Complemental strand, 42823295 - 42823114
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  | | |||||||||| ||| ||| ||    
T  42823295 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatacttatg 42823196  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataa 369  Q
    || ||||||  |||| || |||||||||||| |||||||||||| |||||||||  ||| ||| ||| | ||||||||||||    
T  42823195 cggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 9563159 - 9562999
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  ||||||| ||||||| | |||||||||||||||| ||||| ||||| | ||||||| | || ||||||  | |||||||||||||||||||    
T  9563159 tttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtca 9563060  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||||| ||| ||||||||| ||||||||||  ||| ||| | |||||||||| ||||    
T  9563059 gatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 187 - 373
Target Start/End: Complemental strand, 47532050 - 47531864
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| || ||||  |||||||  |||||| ||||||||| |||| |||||||||||| ||| | ||||| ||||||||| | |||||||    
T  47532050 aaaggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 47531951  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 373  Q
    ||| ||| ||  || | |||||||| ||| || ||||| ||| ||| ||||||||| ||  ||||| | ||||||||||||||||||    
T  47531950 gcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactcg 47531864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 352
Target Start/End: Original strand, 13897970 - 13898135
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    |||| |||||||||  |||||||  |||||||| ||||||  || |||| ||||| || |||| |||| |||||  ||| |||||||||| | |||||||    
T  13897970 aaagaaaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgt 13898069  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 352  Q
    | ||||||||| |||  |||||||| ||||||||||||||||||| |||||||||| ||| |||||    
T  13898070 gtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 13898135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 24699870 - 24700054
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||  ||||||||| ||||| | || |||| | |||  | ||||||||| ||||| ||||||||||||||| | || ||||    
T  24699870 aaaggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgt 24699968  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |  |||||||||| | ||||| || |||||||||||||||||||| ||||||||| ||  ||||| | |||||||||||| ||||    
T  24699969 acagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  269 aagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcata 368  Q
    |||||||| | |||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||  ||| ||| ||| ||||||||||||     
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  369 actc 372  Q
    ||||    
T  27714988 actc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 11095377 - 11095463
Alignment:
Q  296 acgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaattaat 382  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| |||| ||| |||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttaatttaat 11095463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 246 - 372
Target Start/End: Original strand, 48375680 - 48375806
Alignment:
Q  246 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 345  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||| |||||| ||||| ||  |||| |||||| | ||| | |  | |||||||||||||    
T  48375680 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtca 48375779  T
Q  346 cttaagggtttctatgtatcataactc 372  Q
    | ||||||| |||||| ||||||||||    
T  48375780 cctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 11907487 - 11907371
Alignment:
Q  256 gaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtt 355  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||  |||| || ||||| |||||| |||| ||||  | | |||||||||||| |||||||     
T  11907487 gaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtg 11907388  T
Q  356 tctatgtatcataactc 372  Q
    |||||||||||||||||    
T  11907387 tctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 29555022 - 29554974
Alignment:
Q  573 cattctcaaaatcaacataactagatgccaggaacaagtacttcgtggc 621  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29555022 cattctcaaaatcaacataactagatgccaggaacaagtacttcgtggc 29554974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 364
Target Start/End: Complemental strand, 39670161 - 39670019
Alignment:
Q  222 tacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatg 321  Q
    |||||||||||||||| ||| ||||| |||||| ||||| ||||| |||||| || | ||| ||| |||||||||| |||  |||||||||||||||||     
T  39670161 tacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttata 39670062  T
Q  322 tgggtgtcaaagggtgtattgtcacttaagggtttctatgtat 364  Q
    | | |||||| || | ||||| ||| ||||| | |||||||||    
T  39670061 tagatgtcaagggatatattgccacataaggatgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 187 - 331
Target Start/End: Original strand, 1758374 - 1758515
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    |||| |||||||||| || ||||  |||||||  ||||||| ||||||| |||||||||||||||||| ||||| |||| |||||||||||| || ||||    
T  1758374 aaagaaaaatgttacataaacactgtttattc--atacacctttgtaca-cccatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgt 1758470  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 331  Q
    | |  |||||||| || |  ||||| |||||| ||||||||||||    
T  1758471 gtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaa 1758515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 36331278 - 36331399
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||||||  || | || ||||| |||||| |    
T  36331278 atacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgt 36331377  T
Q  321 gtgggtgtcaaagggtgtattg 342  Q
    ||||||||||| ||||| ||||    
T  36331378 gtgggtgtcaaggggtgcattg 36331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 35093767 - 35093585
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||   |||||||| ||||||| ||||||||| |||||| ||||||||| ||| |  ||| | |||||||| | |||||||  |    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatg 35093668  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
      || ||| |||| || ||||| ||||||  |||| ||||||| | ||||||||||| ||| | | |||||||||| ||||||    
T  35093667 gagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 246 - 374
Target Start/End: Complemental strand, 41080833 - 41080707
Alignment:
Q  246 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 345  Q
    ||||||||| ||||| |||| |||||||||||| |||||||| | ||||||| |||| || | ||| ||||||  |||||||||||||||||| |||  |    
T  41080833 taggaagagagaagaggagatgaaagagaaaatgtgcttgtgtg-ggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta 41080735  T
Q  346 cttaagggtttctatgtatcataactcgt 374  Q
    | ||||| | |||||||||||| ||||||    
T  41080734 c-taaggatgtctatgtatcattactcgt 41080707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 43745825 - 43745766
Alignment:
Q  293 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 352  Q
    |||||||||  |||||||||||||||| |||| |||||||| |||||||| |||||||||    
T  43745825 tccacgtgatgacgtgtcaaatttttacgtggatgtcaaagagtgtattgccacttaagg 43745766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 11095289 - 11095349
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagag 254  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| || |||||||||||||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgcattaggaagag 11095349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 21746137 - 21746202
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| | |||  ||| ||||||| |||||||||| |||||||||| | |||||||    
T  21746137 atacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 21746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 43746524 - 43746435
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 276  Q
    |||| |||||||||| || ||||  ||| || | ||||||||||||||| | |||||| ||||||||  ||||| |||| ||||||||||    
T  43746524 aaagaaaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaa 43746435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 45320486 - 45320390
Alignment:
Q  256 gaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 352  Q
    ||||| |||| |||| ||||||| |  ||||| || |||||| | ||||||| ||| |||||| |||| |||| || | ||||||||||||||||||    
T  45320486 gaagaggagatgaaaaagaaaatgtatttgtgtgaagtccacataactacgtatcagatttttgtgtgagtgttaatgagtgtattgtcacttaagg 45320390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 5e-55; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 203 - 372
Target Start/End: Original strand, 33436031 - 33436200
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 302  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  33436031 tagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgac 33436130  T
Q  303 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||| | |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  33436131 tacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 10249304 - 10249482
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||||| | |||||||||| |||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 13438521 - 13438343
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 32505570 - 32505748
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| ||||||||||| |||||| ||||| ||||| ||| ||||| | |||||||||| |||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  32505670 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 30915614 - 30915463
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| ||||||||    
T  30915614 atacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttat 30915515  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||| |||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  30915514 gtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 20700997 - 20700815
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||||| | ||||| ||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||||||||||||||||| |||||| ||| || |||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 194 - 367
Target Start/End: Complemental strand, 28863633 - 28863460
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||||| |||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 9058640 - 9058480
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||| |||||||||||||    
T  9058640 tttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtca 9058541  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  9058540 gatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 17473198 - 17473020
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 40701656 - 40701478
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 194 - 367
Target Start/End: Original strand, 19930742 - 19930915
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| ||||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | || ||||||| |||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 7465657 - 7465835
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||| | |||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 4060836 - 4060685
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| | ||||| |||| | ||||||| ||||||||||| |||||| |    
T  4060836 atacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgt 4060737  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||| ||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  4060736 gtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 40613819 - 40614002
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| |||||||  |||||||  ||||||||||||||| ||||| ||||| |||||  ||| | ||||| ||||||||| | |||||||||    
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgc 40613918  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | |||||| ||| | |||||||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  40613919 ggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 36169018 - 36168836
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  |||||||| |||||| |||||||| ||||| |||||||||||| ||| | ||||| ||||||||| ||||||||||||    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||| | ||||||||||||||| |||||| || ||||| ||||||||||  ||||| | |||||||||||||||||    
T  36168918 gggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 194 - 377
Target Start/End: Original strand, 28381577 - 28381760
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||  ||||||||||| ||||||||||| ||||||||| | ||||||||||  ||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    ||| |||||||||||||| |||||| |||||||||| || ||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcataaa 28381760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 42257376 - 42257193
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    |||||||| |||| |||||||  ||||||  ||||||| |||||||| ||||| |||||||||||  ||||| ||||| ||||||||| | |||||||||    
T  42257376 aggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgc 42257277  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | |||||| ||| | |||||||| |||||||||||||||||||| | ||||||| ||| ||| | | |||||||||||||||||    
T  42257276 ggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 38732539 - 38732354
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||| ||||| |   ||||| ||||||||||| |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  38732539 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 38732440  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||  |||| || ||||| |||||| |||||||||||| || ||||||||||| ||||||| | |||||||||||||||    
T  38732439 gcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 372
Target Start/End: Original strand, 38882751 - 38882913
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc---gaggtccacgtgactacgtg 308  Q
    |||||||  ||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||||| |  ||||||||   | ||||||||||||||||||    
T  38882751 tttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtg 38882850  T
Q  309 tcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| |||||| ||||| ||||||||||| ||||| ||| ||||||| |||||||||||| ||||    
T  38882851 tcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 372
Target Start/End: Original strand, 26891476 - 26891604
Alignment:
Q  244 attaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgt 343  Q
    ||||||||||| |||||  |||||||||||||||| ||||||| ||||||||||||||| || ||||| |||||| |||||||||| | ||||||||||     
T  26891476 attaggaagagagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgc 26891575  T
Q  344 cacttaagggtttctatgtatcataactc 372  Q
    ||| |||||||  ||||||||||||||||    
T  26891576 cacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 2533306 - 2533124
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||  || ||||  |||||||  ||||||||||||||| ||||| |||| ||||||| ||||| ||||  ||||| ||| | |||||||||    
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgc 2533207  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | |||| | ||| |||||||||| |||||| ||| ||||||||||| ||||||| ||||||||| | |||||||||||||||||    
T  2533206 ggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 43490303 - 43490121
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| || ||| ||||||||||| |||||  ||| |||||| ||| | | ||||||||    
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | || ||||| |||||| |||||||||||| |||||||||||||| ||||||| | |||||||||||||||    
T  43490203 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 5574479 - 5574588
Alignment:
Q  263 agaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgt 362  Q
    |||| ||||||||| | |||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || |||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  363 atcataactc 372  Q
    ||||| ||||    
T  5574579 atcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 38273061 - 38273242
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    ||||||| |||| || ||||  |||||||| ||||| | ||||||| ||||| |||||||||||| ||| | ||||| ||||||||| | |||| |||||    
T  38273061 ggaaaatattacataaacaccatttattctcatacatc-ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||| |||||||||| |||||| ||||||||| ||||||||||||| ||  ||||  | |||||||||||||||||    
T  38273160 gggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 27864851 - 27864704
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||| |||||||||||||||||||||| |||||||||||             ||||||||| | ||||| |||| ||||||||||| |||||||||    
T  27864851 tttattctcatacacccttgtacatcccatgtattaggaagag-------------aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtca 27864765  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||| ||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  27864764 gatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 229 - 372
Target Start/End: Original strand, 17819961 - 17820104
Alignment:
Q  229 ttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgt 328  Q
    ||||||| | |||||||||||||||| ||||| |||| |||||||||||| || ||||| | ||||||||| || || ||||| |||||| |||||||||    
T  17819961 ttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgt 17820060  T
Q  329 caaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| |||||||||| ||| ||  | | |||||||||||||||||    
T  17820061 caaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 355
Target Start/End: Original strand, 2997402 - 2997570
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||| ||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  2997402 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 2997501  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtt 355  Q
    ||| ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||||    
T  2997502 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtt 2997570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 341
Target Start/End: Complemental strand, 41758772 - 41758616
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgc--tt 284  Q
    |||| |||||||||| ||||||||||||||||| ||||| ||||||||| |||||  ||||||||||| ||||| ||||  ||||||||||| |||  ||    
T  41758772 aaagaaaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgcgttt 41758673  T
Q  285 gtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtatt 341  Q
     |||||| |  | ||| |||||||||| |||||||| | ||||||||| ||| ||||    
T  41758672 atgcgagatttatgtggctacgtgtcagatttttatataggtgtcaaaaggtatatt 41758616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 188 - 366
Target Start/End: Complemental strand, 3440163 - 3439985
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  ||||||   ||||||| ||||||| || ||    ||| ||||| ||||| ||||||||||||||||| ||||||||    
T  3440163 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtg 3440064  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatca 366  Q
    || ||||||||| |  || ||| | |||||| |||||||||| | | |||||||| ||| ||||||| |||| ||||||    
T  3440063 cggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 33436386 - 33436211
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||| ||||||||| ||||||          | |||| | ||||||||| ||||| || |||||||||||| | |||||||    
T  33436386 aaaggaaaatgttacatagacaccttttattctcatacac----------ctcatgaactaggaagagagaagaggataggaaagagaaagtgtgcttgt 33436297  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || | |||||| ||   |||||||| |||||||||||||||||||| ||||||||| ||  ||||| | |||||||||||| ||||    
T  33436296 gcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 191 - 287
Target Start/End: Complemental strand, 44152108 - 44152012
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    ||||||||||| || |||| ||||||||  ||||||||||||| ||| |||||||||||||||| ||||| |||| |||||||||| | ||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtg 44152012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 221 - 372
Target Start/End: Original strand, 45097684 - 45097835
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    |||||| ||||||||||| ||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||||||  || | || ||||| |||||| |    
T  45097684 atacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgt 45097783  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||||||| || ||||||| ||| ||||| | | |||||||||||||||    
T  45097784 atgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 13365536 - 13365351
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||| ||||| |   || |||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||    
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 13365437  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg--gtttctatgtatcataactc 372  Q
    | ||||||  ||   || ||||| |||||| |||||||||||| |||| ||||| ||  |||||  || | |||||||||||||||    
T  13365436 ggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactc 13365351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 367
Target Start/End: Complemental strand, 41575278 - 41575142
Alignment:
Q  232 tacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc-gaggtccacgtgactacgtgtcaaatttttatgtgggtgtca 330  Q
    |||||| |||||||||||| ||| ||||| |||| |||||||||| | ||||||||  | ||||||| |||| || |||||||||||| ||||  |||||    
T  41575278 tacatctcatgcattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtca 41575179  T
Q  331 aagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||||||||  ||  ||||| | ||||||||||||    
T  41575178 aagggtgtattaccatctaaggatgtctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 329
Target Start/End: Complemental strand, 3738125 - 3737986
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  | |||| | ||||||| ||||||| || ||    ||||||||  ||||| ||||||||| ||||||| ||||||||||    
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtc 329  Q
     ||||||| |||| || ||||| |||||| ||||||||||    
T  3738025 gggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 189 - 286
Target Start/End: Complemental strand, 17823971 - 17823874
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||| ||||||   ||||||   ||||||||||||||| |||||  ||| ||||||| |||||||||| |||||||||| | |||||||    
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 17823874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 3034901 - 3035029
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||| | ||||| | |||| ||||||||||| |||||  ||| |||||||||| ||| ||||||||    
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  290 aggtccacgtgactacgtgtcaaattttt 318  Q
     ||||||  |||| || ||||| ||||||    
T  3035001 gggtccatatgaccacatgtcagattttt 3035029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 2329431 - 2329352
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcat-ta---ggaagagggaagatgagaggaaagagaaaat 278  Q
    ||||||| |||||||||||| ||||||||||||||||||  || ||   ||||||| ||||| |||||||||||||||||    
T  2329431 tagacactttttattcttattcacccttgtacatcccatatatctatcgggaagagagaagaggagaggaaagagaaaat 2329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 3e-53; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 9474798 - 9474976
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | || ||||||| |||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  9474898 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 32813429 - 32813247
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | ||||||||||    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||| |||||||| |||||| ||||||||| ||||||||||||| ||| ||||| | |||||||||||||||||    
T  32813329 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 2582075 - 2581915
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||| ||||||||||||||| | |||| ||||||||||| ||||| ||||| ||| ||||| | |||||||||| |||||||||||||||||||||    
T  2582075 tttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 2581976  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  2581975 gatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 27564657 - 27564835
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||| ||||||||| |||||| ||||||||||||| ||||||||| ||| ||||| | |||||||||||| ||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 41758983 - 41758805
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | || ||||||| |||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| |||||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 51898601 - 51898783
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  ||||||  |||||||||||||||| |||||||| ||||||||| ||||| ||||||||| ||||| | ||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||| | | |||||||||||| ||||    
T  51898701 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 203 - 372
Target Start/End: Complemental strand, 50630627 - 50630458
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 302  Q
    |||||||  |||||||| ||||||||||||||| || ||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||    
T  50630627 tagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgac 50630528  T
Q  303 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||| |||||| |||||||  |||||| ||||||| ||| ||||||| |||||||||||| ||||    
T  50630527 tacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 221 - 373
Target Start/End: Complemental strand, 3000470 - 3000318
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  3000470 atacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 3000371  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 373  Q
    |||||||||||||||||||||| ||| ||||||| | |||||||||| |||||    
T  3000370 gtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcg 3000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 48716204 - 48716382
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| || || ||||| ||| | |||||||||| |||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 212 - 372
Target Start/End: Original strand, 38632261 - 38632421
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||| ||| | |||||||||| |||||||||||||||||||||    
T  38632261 tttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtca 38632360  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||| ||| ||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  38632361 gatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 38595305 - 38595154
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  38595305 atacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 38595206  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||||||| ||| ||| ||| | |||||||||| ||||    
T  38595205 gtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 187 - 377
Target Start/End: Original strand, 45044475 - 45044665
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||||| ||||| |||||||||||| |||||  |||| ||||||||||| || ||||    
T  45044475 aaaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgt 45044574  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    ||| |||||| ||| |||| ||||| |||||| | ||||||||||| ||||||||| ||| |||||   | ||||||||||||||| ||||    
T  45044575 gcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactcttaaa 45044665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 47452242 - 47452420
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||| ||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| ||||    
T  47452342 ccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 43292 - 43132
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    ||||||||||||||| |||||||| |||||||||||| ||||| || || ||||| ||||||||| | ||||||||||  ||||||||||||||||||||    
T  43292 tttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtca 43193  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||||||||||||| ||||||||| | ||||  | |||||||||||| ||||    
T  43192 gatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 5958916 - 5959100
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| ||||||||||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||||||    
T  5958916 aaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 5959015  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || ||||||  |||| || ||||| |||||| ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||    
T  5959016 cggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 13414910 - 13414787
Alignment:
Q  223 acacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgt 322  Q
    ||||||| |||||  ||||||||||||||||| |||||||| || ||||||||||| |||||||| | ||||||||||||||||||| | |||||| |||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgt 13414811  T
Q  323 gggtgtcaaagggtgtattgtcac 346  Q
    ||||||||||||||||||||||||    
T  13414810 gggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 192 - 372
Target Start/End: Original strand, 49811447 - 49811627
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| |||||||  |||||||| |||||||||||| || | ||| |||||||||||| ||||| ||||| ||||||||| | ||||||||||      
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| |  || |||||||||| |||||| ||||| ||||||| ||||||||||||| ||||| | ||||| |||||||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 37649376 - 37649198
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| |||| |||| | ||||||||||   |    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||||| |||||||| |||||| |||||||||||||| |||||||| ||| ||| | | |||||||||||| ||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 372
Target Start/End: Original strand, 8346327 - 8346488
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaa-gatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtc 310  Q
    |||||||| ||||||| |||||||  |||||||||||||||||  || || ||||| ||||||||| | |||||||||  ||||||||||||||||||||    
T  8346327 tttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtc 8346426  T
Q  311 aaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | |||||| ||||||||||||| ||||||||| ||| ||| |||  ||||||||||| ||||    
T  8346427 agatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 190 - 371
Target Start/End: Complemental strand, 44454165 - 44453980
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtac----atcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttg 285  Q
    |||||||||||| || ||||  ||||||||||||||||||| |||    | |||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  286 tgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataact 371  Q
    || | | ||||||| || || ||||| |||||| ||||||| ||||  | ||||||| ||||||| ||| ||||||||||||||||    
T  44454065 tgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 367
Target Start/End: Original strand, 44548343 - 44548471
Alignment:
Q  239 catgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgt 338  Q
    |||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||    
T  44548343 catgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgt 44548442  T
Q  339 attgtcacttaagggtttctatgtatcat 367  Q
    |||| ||| ||| | | ||||||||||||    
T  44548443 attgccacctaaagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 50590918 - 50591100
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||| || ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  50591018 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 187 - 352
Target Start/End: Original strand, 11152293 - 11152458
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||  |||||||  |||||||| ||||| |||| |||| |||||||| | ||||||| ||||| ||||||||| |||||   |||||||    
T  11152293 aaaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgt 11152392  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 352  Q
    ||| |||| || ||||||||||||| |||||| ||||| |||| |||||||||||| ||| |||||    
T  11152393 gcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg 11152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 188 - 372
Target Start/End: Complemental strand, 47748626 - 47748443
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| ||||||| ||||| |   |||||| |||||||| |||||| ||||||||||| |||||  ||| |||||||||| ||| ||||||    
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 47748527  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || | ||||  || | || ||||| |||||||| |||||||| |||||||||||| ||| ||||||| | |||||||||||||||    
T  47748526 cgggatccatatggccacatgtcagatttttatatgggtgtc-aagggtgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 7740893 - 7740733
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    ||||||||  |||| | ||||||||||||||||  |||||||| ||||| |||| |||| |||||||||  ||||| | ||||||| |  | ||||||||    
T  7740893 tttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgtgtca 7740794  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||||||| |||||||| || ||||||||||| ||||| | || ||||||||||||||    
T  7740793 tatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 194 - 367
Target Start/End: Complemental strand, 26274607 - 26274437
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  |||||||||||| |||| |||||||||||||||| |||||   ||| ||||| ||| | | |||||||  | |    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaaga---gagaaaagaaaaagtgtacttgtgcaggat 26274511  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    ||||||||||| |||||| |||||| ||||| ||||||| | ||||||| ||| ||||||| ||||||||||||    
T  26274510 ccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 37926356 - 37926538
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    ||||||| |||  |||||||  |||||||  ||||| ||||||||| ||||| |||||||||||| |||||  |||| ||||||||| | | ||||| ||    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | |||| ||| | |||||||| |||||||||||||||| ||| | ||||||| ||| ||| | | |||||||||||||||||    
T  37926456 ggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 192 - 372
Target Start/End: Original strand, 23597011 - 23597191
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| ||||||  ||||||||| ||||| ||||| ||| | |||| | |||||| || ||| | ||||| ||||| ||| | || |||||| ||    
T  23597011 aaaatgttacatagacattttttattctcatacatccttggacacctcatgaactaggaatagagaataggagagaaaagataaagtgtgtttgtgcaag 23597110  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||| | |||||||| |||||||||||||| |||||| |||||||| ||| ||| | | |||||||||||| ||||    
T  23597111 gtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 6261052 - 6260870
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  |||||| | ||||||| ||||||| || ||  | ||| ||||| ||||| |||| |||| ||||||| ||||| ||||    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||||||||| || ||| | ||||||||||||||||  | |||||||||  ||| ||||| | ||||| |||||||||||    
T  6260952 gggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 41608411 - 41608593
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || |||| ||||| |   ||||||||||||||| || ||| ||||||||||| |||||  ||| |||||||||| | | ||||| ||    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | || ||||| |||||| |||| ||||||| |||||||||| ||| ||||| | | |||||||||||||||    
T  41608511 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 378
Target Start/End: Original strand, 3302482 - 3302639
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| || ||  ||| ||||||| |||||||||| |||| ||||| | |||||||  | ||||||  ||| ||||||||| |||||| |    
T  3302482 atacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgt 3302581  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaat 378  Q
    ||||||||| | |  | ||||||||| ||||| | | |||||||||| |||| |||||    
T  3302582 gtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcataaat 3302639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 372
Target Start/End: Complemental strand, 26440908 - 26440734
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| || |||   ||||||| ||||||||||||||||| |||| ||||| |||||| |||          |||||||| | ||||| ||    
T  26440908 aaggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa----------aagagaaagtgtgcttatg 26440819  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || | |||| ||| | |||||||| |||||| ||||||||| ||||||||||||||||  ||||| | ||||| |||| ||||||    
T  26440818 cgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactc 26440734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 44332289 - 44332430
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||| || ||||| |   |||||||||||||||  | ||| ||||||||||| |||||  ||| |||||||||| ||| ||||||||    
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 331  Q
     ||||||   | | || ||||| |||||||||||||||||||    
T  44332389 gggtccatagggccacatgtcagatttttatgtgggtgtcaa 44332430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 34339968 - 34340075
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| ||||||| ||||||| | | |||| |||||||| || ||||| | ||||||| |||||  |||| ||| ||||| | ||||| | ||||    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaagagaagagaaaaaagaaactgtgcttatacgag 34340066  T
Q  292 gtccacgtg 300  Q
    |||||||||    
T  34340067 gtccacgtg 34340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 8779 - 8963
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||  ||||||||||| ||||||| ||||||||||||||| | ||||||    
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtg 8878  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | |||||||||||||| ||||||||||||| ||| | |||||||  |||||||||||||||||| | ||||| |||||||||||    
T  8879 tggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 7e-51; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 6034222 - 6034044
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  6034122 ccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 48182971 - 48183149
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| ||||||||||| |||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 188 - 372
Target Start/End: Complemental strand, 31910376 - 31910192
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  |||||||  |||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||| | ||||||||    
T  31910376 aaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtg 31910277  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || |||||| ||| ||| |||||| |||||| |||||||||||||| |||||||||||| ||||| | |||||||||||||||||    
T  31910276 cggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 221 - 372
Target Start/End: Original strand, 480396 - 480547
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  480396 atacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 480495  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  480496 gtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 194 - 373
Target Start/End: Complemental strand, 41236525 - 41236346
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 373  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||| |||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcg 41236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 50052345 - 50052528
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| |||||||  |||||||  ||||||| ||||||| |  ||||| ||||||||| ||||| ||||||||||||||| | |||||||||    
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 50052444  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  50052445 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 24995029 - 24995207
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||| ||||||| ||||||||||| |||||| ||||| ||||| ||||||||||| |||||||||| |||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| || || |||||| ||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 29240071 - 29239886
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  |||||||  |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||| | |||||||    
T  29240071 aaaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgt 29239972  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | | ||||||||||||||||||| | |||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  29239971 gtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 221 - 372
Target Start/End: Original strand, 11511411 - 11511562
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| | ||||||||| |||||| |||||  |||| ||||||||| | |||||||||| ||||||||||||||||||||| ||||||||    
T  11511411 atacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttat 11511510  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  11511511 gtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 221 - 372
Target Start/End: Original strand, 42044316 - 42044467
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |    
T  42044316 atacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 42044415  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||  |||| ||||||| ||| ||||||| |||||||||||| ||||    
T  42044416 gtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 212 - 372
Target Start/End: Original strand, 54473473 - 54473633
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  |||||||||||||||  ||||| ||||||||||| ||||| ||||| ||||| ||| | |||||||||| ||||||||||||||||||| |    
T  54473473 tttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtta 54473572  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  54473573 gatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 50526088 - 50526271
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| || ||||  ||||||  |||||||||||||||| |||||||| ||||||||| ||||| ||||||||| |||||   |||||||||    
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgc 50526187  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |   |||||||||| |||||||| |||||| ||||||||||||||||||||||| ||| ||| | | |||||||||||| ||||    
T  50526188 ggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 190 - 334
Target Start/End: Complemental strand, 41824064 - 41823920
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||| ||||||| ||||||| | |||||||||||||||| ||||| ||||| ||||||||| | ||||||||||    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagg 334  Q
     |||||| |||||||||||||| |||||| ||||||||| |||||    
T  41823964 gggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 232 - 372
Target Start/End: Original strand, 29234205 - 29234345
Alignment:
Q  232 tacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 331  Q
    |||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| ||  ||| ||||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaa 29234304  T
Q  332 agggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||||| ||  ||||||| |||||||||||| ||||    
T  29234305 agggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 40574959 - 40574779
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||| |||||  ||||||||||| ||||| ||||| ||||||||| | ||||||| || |    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||| ||  |  ||||||| |||||| ||||||||||||||||||||||  ||| ||||| | |||||||||||||||||    
T  40574859 atccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 19670631 - 19670816
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  19670631 aaaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 19670730  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||  || | || ||||| |||||| |||| ||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  19670731 gcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 191 - 372
Target Start/End: Original strand, 48647645 - 48647826
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| ||||||   |||||| ||||||| | |||||||| | ||||| ||||||||| ||||| ||||||||||||||| | ||||||||||     
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgg 48647744  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||||||| |||||| | |||||||||||||||| ||  |||||||||| || ||||| | | ||||| |||||||||    
T  48647745 agtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 188 - 372
Target Start/End: Complemental strand, 3481828 - 3481654
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  |||||||| |||||||||          ||||| ||| ||||| ||||||| ||||||||||||| | ||||||||    
T  3481828 aaggaaaatgttacatagacaccctttattctcatacaccct----------atgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtg 3481739  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | |||||||||||||| |||||| |||||| |||||||||||||| |||||||| ||| ||| ||| |||||||||||| ||||    
T  3481738 tggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 23608395 - 23608235
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  ||||| || |||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||| |  || |||||||||||||||||    
T  23608395 tttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtca 23608296  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||||||||||||| ||||||||||||  ||||||| ||||| |||||| ||||    
T  23608295 gatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 50813810 - 50813992
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||||| |||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||| ||  |||| || ||||| |||||| |||||||||||| |||||||||  ||| |||| || | |||||||||||||||    
T  50813910 gggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 55475373 - 55475191
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||| |||     
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | || ||||| |||||| ||||||||||||||||||||||| ||| ||||| | | |||||||||||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 47986392 - 47986208
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||| ||| |||   |||||||||||||||||||||| ||||||||||| |||||  | | |||||||||| | | |||||    
T  47986392 aaaggaaaatgttacatagacacctttaattgc-atacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgt 47986294  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||  || | || ||||| |||||| ||||| |||||| || ||||||| ||| ||||||| | |||||||||||||||    
T  47986293 gcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 355
Target Start/End: Original strand, 17983658 - 17983826
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||| ||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  17983658 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 17983757  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtt 355  Q
    ||| ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||||    
T  17983758 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtt 17983826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 189 - 379
Target Start/End: Original strand, 29547876 - 29548066
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||| ||| | | ||| |||    
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgc 29547975  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaatt 379  Q
    | | ||||  || | || ||||| |||||| |||||||||||| || ||||||| ||| ||||| | | ||||||||||||||| ||||||    
T  29547976 gggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactcttaaatt 29548066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 53352540 - 53352661
Alignment:
Q  246 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 345  Q
    ||||||||| ||||| ||||| ||||||||| |||||||||||| ||||||| | ||||||||||| |||||| ||| ||||| ||||  ||||||| ||    
T  53352540 taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-ca 53352638  T
Q  346 cttaagggtttctatgtatcata 368  Q
    | ||||||| |||||||||||||    
T  53352639 cctaagggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 28480184 - 28480368
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  |||||    ||||| ||||||||| | |||||| ||||||||| ||||| |||| ||| |||||| | || |||||    
T  28480184 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28480283  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | ||||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | ||||||||| |||||||    
T  28480284 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 28481059 - 28481243
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  |||||    ||||| ||||||||| | |||||| ||||||||| ||||| |||| ||| |||||| | || |||||    
T  28481059 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28481158  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | ||||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | ||||||||| |||||||    
T  28481159 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 28481934 - 28482118
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| |||||||  |||||    ||||| ||||||||| | |||||| ||||||||| ||||| |||| ||| |||||| | || |||||    
T  28481934 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28482033  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | ||||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | ||||||||| |||||||    
T  28482034 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 29978065 - 29977885
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| |||| |  |||||||| ||||||| |||||||| ||||| ||||||  ||||  ||||  ||| |||||||||| | |||||||| | |    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||  ||||||||||||| |||||| ||||||||| || |||||||||| ||| || || | | |||||||||| ||||    
T  29977965 gtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 193 - 345
Target Start/End: Complemental strand, 47104723 - 47104571
Alignment:
Q  193 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg 292  Q
    ||||||||||||||||| |||||||||  ||||  || ||||| | ||||||||| |||||| ||||| |||| |||||||||| | || ||||| | ||    
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtgggg 47104624  T
Q  293 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 345  Q
    || |    || ||||||||||||||| ||||||||||| || |||||||||||    
T  47104623 tcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtca 47104571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 238 - 373
Target Start/End: Original strand, 8343129 - 8343264
Alignment:
Q  238 ccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtg 337  Q
    ||||| ||||||||||| |||||  ||| |||||||||| ||| ||| |||| ||||||  || | || ||||| |||||||||| ||||||||||| ||    
T  8343129 ccatgtattaggaagagagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatg 8343228  T
Q  338 tattgtcacttaagggtttctatgtatcataactcg 373  Q
    ||||| ||| ||||| | | ||||||||||||||||    
T  8343229 tattgccacctaaggatgtttatgtatcataactcg 8343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 32767141 - 32766958
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||||||||| |   |||||||||||||||  | ||| ||||| ||||| || ||  ||| |||||||||| | | |||||||    
T  32767141 aggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgc 32767042  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
      ||||||  || | || ||||| |||||| | |||||||||| |||||||||| ||| |||| || | |||||||||||||||    
T  32767041 agggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 184 - 372
Target Start/End: Original strand, 18924407 - 18924595
Alignment:
Q  184 atcaaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgct 283  Q
    |||||||||||||||||| ||||||| ||||| |   |||||||||| |||| | |||| ||||||||||| |||||  ||| |||||||||| | | ||    
T  18924407 atcaaaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtact 18924506  T
Q  284 tgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||  || ||  |  | || ||||| |||||| ||||| | |||| |||||||||| ||| ||||||| | |||| ||||||||||    
T  18924507 tgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 29589655 - 29589810
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    |||||||||| |||| ||||||| ||||| |   |||||| |||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  29589655 aaaggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 29589754  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattg 342  Q
    | | ||||||  || | || | ||| |||||| |||||||||||| ||||||||||    
T  29589755 gtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg 29589810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 44536663 - 44536845
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||||||||| |   |||||  |||||||| || ||| ||||||||||| |||||  ||| |||||||||| | | ||| ||     
T  44536663 aggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgt 44536762  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | |||| |  |||| || ||||| |||||| ||||| |||| |||||||||||| ||| |||  || | |||||||||||||||    
T  44536763 ggggtctatatgaccacatgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 56300086 - 56300169
Alignment:
Q  193 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 276  Q
    ||||||||||||||||   |||||||| |||||  |||||||||| ||| |||||| ||||| ||||| |||||||||||||||    
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaa 56300169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 372
Target Start/End: Original strand, 55079679 - 55079814
Alignment:
Q  238 ccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg-tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggt 336  Q
    ||||| ||||||||||| |||||  ||| |||||||||| | | |||||| | || ||||  || | || ||||| |||||| | ||||||||||  |||    
T  55079679 ccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggt 55079778  T
Q  337 gtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||| ||||||| | |||||||||||||||    
T  55079779 gtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 4e-49; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 21234584 - 21234401
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||| ||||||||| ||||||| ||||||| ||||| |||||||||||| | | | |||||| |||||||||| |||||||||    
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgc 21234485  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | ||| || ||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||| | |||||||||||||||||    
T  21234484 ggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 38267191 - 38267040
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||| | |||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |    
T  38267191 atacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 38267092  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  38267091 gtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 8080305 - 8080483
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 46033719 - 46033901
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||||||||||||||    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
      || || ||||| |||||||| |||||||||||||||| ||||||||||||| ||| ||||  | |||||||||||||||||    
T  46033819 gagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 35137689 - 35137533
Alignment:
Q  216 ttcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatt 315  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | || ||||||| ||||||||||||||||||| | |||    
T  35137689 ttctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatt 35137590  T
Q  316 tttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||||||||||||||||||| ||| ||||||| ||||| |||||| ||||    
T  35137589 tttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 38837368 - 38837217
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |    
T  38837368 atacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 38837269  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || |||||  |||||||||||| ||| ||||||| |||||||||||| ||||    
T  38837268 gtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Original strand, 4999436 - 4999614
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||||| | || ||||||| |||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||  ||||||| |||||||||||| ||||    
T  4999536 ccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 19330020 - 19329842
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||| ||||||||| |||||| ||||||||||||| ||||||||| ||| ||||| | |||||||||||| ||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 203 - 372
Target Start/End: Original strand, 19436118 - 19436287
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 302  Q
    |||||||  |||||||| ||||||||||||||| ||||||||||||||||||  ||||  |||| ||||||||| | ||||| |||| | ||||||||||    
T  19436118 tagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgac 19436217  T
Q  303 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  19436218 tacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 372
Target Start/End: Complemental strand, 40957858 - 40957707
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| | ||||||| || | ||||||||||||||||||| |||||| |    
T  40957858 atacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgt 40957759  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| |||||| |||||||| ||| |||| || |||||||||||| ||||    
T  40957758 gtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 212 - 386
Target Start/End: Complemental strand, 7389548 - 7389375
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  ||||||||| ||||| |||||| ||||||||||| ||  | ||||| ||||||||| | |||||||||| |||||||||||||||||||||    
T  7389548 tttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 7389450  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaattaataaca 386  Q
     |||||| |||||||||||||| |||||||| ||| ||||||| |||||||||||| |||| |||| ||||||||    
T  7389449 gatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactcttaaaataataaca 7389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 187 - 371
Target Start/End: Complemental strand, 35523061 - 35522877
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| || ||||  |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | |||||||    
T  35523061 aaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgt 35522962  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataact 371  Q
    ||| | ||||  || | |||||||| |||||| ||||||||| ||| ||||||||| ||||||||| | ||||||||||||||||    
T  35522961 gcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 228 - 367
Target Start/End: Complemental strand, 3784139 - 3784000
Alignment:
Q  228 cttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtg 327  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | ||||||||||||||||||| |||||| ||||||||    
T  3784139 cttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtg 3784040  T
Q  328 tcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    ||||| | ||||||| ||| ||||||| ||||||||||||    
T  3784039 tcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 213 - 367
Target Start/End: Original strand, 32951434 - 32951588
Alignment:
Q  213 ttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaa 312  Q
    ||||||| ||||||||||||||| |||||| ||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||| |     
T  32951434 ttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttag 32951533  T
Q  313 atttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||| ||||| ||| ||||| ||||||||||  |||| || ||||||||||||    
T  32951534 atttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 187 - 372
Target Start/End: Complemental strand, 8238398 - 8238212
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||| | ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  8238398 aaaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 8238299  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcactta-agggtttctatgtatcataactc 372  Q
    ||| ||||||  ||||||| ||||| |||||| ||||||||||||||||||||||| ||| || ||||| | |||||||||||||||    
T  8238298 gcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 3694518 - 3694372
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    |||||| |||||||| |||||||||| ||||||| ||||| ||||| ||||||||| | |||||||||| | ||||| ||||||||||||| |||||| |    
T  3694518 atacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgt 3694419  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||||| ||| ||||||||||||| ||||||| | ||| ||||||    
T  3694418 gtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 26296826 - 26296644
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    ||||||||||||||||||||  | ||||   ||||||||||||||| | ||| ||||| |||||| ||||| ||||| |||||||||||  |||||||||    
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | |||| ||| |||||||||||| ||| ||||||| ||||||||| ||||| | |||||||||||||||||    
T  26296726 gggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 38044379 - 38044197
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| |||||||||||  ||||  ||| |||||||||| | | ||||||||    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || |||| ||||| |||||| ||||| |||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  38044279 gggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 11044356 - 11044188
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||| | ||||||| ||||||| | |||||||||||||||| ||||||||||||||||||||| | | |||||||| |||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||||||||||||           |||||||||||| ||||||| ||| ||||||| |||||||||||| ||||    
T  11044256 ccacgtgactacgtgtca----------ggggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 22343543 - 22343361
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  ||   || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  22343443 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 41423864 - 41423682
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  |||||||| ||||||| ||||||| |||||||| ||||||||| ||||| |||| |||||||||||||||||||| ||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     | || ||||||| || ||||| |||||| |||  |||||||  ||||||||  ||  ||| | | |||||||||||||||||    
T  41423764 ggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 36208306 - 36208173
Alignment:
Q  239 catgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgt 338  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||  |||||||||||| || |||||  ||||| |||||||||||| |  |||    
T  36208306 catgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgt 36208207  T
Q  339 attgtcacttaagggtttctatgtatcataactc 372  Q
    |||  ||| ||||||| |||||||||||||||||    
T  36208206 attaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 36361904 - 36362013
Alignment:
Q  263 agaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgt 362  Q
    |||| ||||||||| | |||||||| | ||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||| ||||||| |||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  363 atcataactc 372  Q
    ||||| ||||    
T  36362004 atcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 36362192 - 36362026
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| |||||||||||||||||||||| |||||||||||             ||||||||| | |||||||| | |||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagaga------------aaagagaaagtgtgcttgtgtggggt 36362105  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||  ||| ||||||| |||||||||||| ||||    
T  36362104 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 191 - 343
Target Start/End: Original strand, 16374743 - 16374895
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| |||||||  |||||||| ||||||| |||||||  |||| |||||||||||| ||| | |||| |||||||||  | |||||||| ||    
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgt 343  Q
    | |||||||||| |||||||| |||||| ||||| |||||| || ||||||||    
T  16374843 gatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattgt 16374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 41915921 - 41915741
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||| |    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||  || | || ||||| |||||| ||| |||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 3434730 - 3434562
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| |||          |||||||| | |||||||||| | |    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa----------aagagaaagtgtgcttgtgcgggat 3434641  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  3434640 ccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 31736060 - 31735884
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||  |||| || ||||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | |||||||||    
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 31735961  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | | |||| ||| | |||||       ||| ||||||||| |||| |||||||| ||| ||||| | |||||||||||||||||    
T  31735960 gggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 188 - 338
Target Start/End: Original strand, 27744225 - 27744375
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||  || ||||  |||||||  ||| | |||||||||||||||||| ||||||||| ||||| ||||||| ||||||||| ||||| ||    
T  27744225 aaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatg 27744324  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgt 338  Q
     | | |||||||| | || ||||| |||||| ||||||| |||||||||||    
T  27744325 agggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 35468773 - 35468955
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || |||| ||||||||| ||||| |||| |||||| |||| | ||||||||| ||||| || |||||||||||| | || ||||||     
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||| ||   || | | | |||||||||||||||||||| | ||||||| ||  ||||| | |||||||||||| ||||    
T  35468873 gggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 32564341 - 32564526
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||| ||||||| |||||| |||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | |  ||||    
T  32564341 aaaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgt 32564440  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||  |  | || ||||| |||||| |||||||||||| |||||||||| ||| ||||  | | |||||||||||||||    
T  32564441 gcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 40846028 - 40846213
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||| || ||||| |   ||||||||||||||||| |||   |||||||||| |||||  ||| |||||||||| | |  ||||    
T  40846028 aaaggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgt 40846127  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||  | ||||| ||| | |||||| ||||| |||||| |||||||||| ||| ||||| | | |||||||||||||||    
T  40846128 gcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 7728086 - 7727906
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| ||||||| ||||| |   ||||| ||||||||| |||||  ||||||||||| |||||  ||| |||| ||||| | | |||||||| |    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||  |||| || ||||| |||||||||||  ||||||  ||||||||  ||| ||||||| | |||||||||||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 18207339 - 18207180
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||| | |||||||||||||||  | || || ||||||||| ||||| |||| |||||||||| | |||||||| | ||| |||||| | |||||| |    
T  18207339 tttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgtta 18207241  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| | ||||||||||  ||||||||| ||| ||||| | |||||||||||||||||    
T  18207240 gatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 372
Target Start/End: Original strand, 39255844 - 39256023
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| |||||||  |||||| | |||||||||||||||| | || ||   ||||||| ||||| |||| |||||||||| | | |||||| |      
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtgtgga 39255943  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||| | |||||||| |||||| | ||||| ||||  ||||||||| ||| ||||| | |||||||||||||||||    
T  39255944 gtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 191 - 331
Target Start/End: Original strand, 2318160 - 2318302
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattag-ga-agagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||| |||||||| ||||||   ||||||| |||||||  ||||||||||| || |||| |||||||||| |||||||||| ||||||| ||     
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgt 2318259  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 331  Q
      |||||||||||| ||  |||| |||||| ||||||||||||    
T  2318260 cgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaa 2318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 46374810 - 46374904
Alignment:
Q  280 tgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgt 374  Q
    |||||||||| |||||| ||| | |||||||| |||||| ||||||||| ||||||||| ||| ||| ||||| | |||||||||||||||||||    
T  46374810 tgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactcgt 46374904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 46374741 - 46374806
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagag 254  Q
    ||||||||||||| |||||||  |||||||  ||||||||||||||| ||||| ||||||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagag 46374806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 329
Target Start/End: Complemental strand, 32046018 - 32045880
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| ||||||   ||||||   ||||||||||||||||| |||  ||| | ||||| |||||||||| |||| ||||| |||||| ||  |     
T  32046018 gaaaatgttacatagacattctttatttacatacacccttgtacatctcatatatttgaaagagagaagatgagatgaaaaagaaagtatgctagtatgg 32045919  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtc 329  Q
    |||| |  ||  ||||||||| |||||||||||||||||    
T  32045918 ggtctatatggttacgtgtcagatttttatgtgggtgtc 32045880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 36361847 - 36361907
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagag 254  Q
    |||| ||| |||||||  |||||||| |||||||||||||||| ||||| |||||||||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtacattccatgtattaggaagag 36361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 194 - 377
Target Start/End: Original strand, 33149560 - 33149743
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  ||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| |||| ||||    
T  33149660 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaa 33149743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 2740452 - 2740274
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||| | |||||||||| | |    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 194 - 367
Target Start/End: Original strand, 18520806 - 18520979
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||| | ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||||| |||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 192 - 372
Target Start/End: Original strand, 35943812 - 35943992
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    |||||||||| |||||||||||||||   ||||||||||||||| |||||||| |||||||||  |||| ||||||||||||||| | |||||||| | |    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||| ||||||| |||||||||||||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 35785377 - 35785199
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| | || ||||||| | |    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 203 - 372
Target Start/End: Original strand, 36732873 - 36733042
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 302  Q
    |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||    
T  36732873 tagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgac 36732972  T
Q  303 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || |||||| |||||| |||||||||||||||||||||||  || ||||||| |||||||||||| ||||    
T  36732973 tatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 203 - 365
Target Start/End: Complemental strand, 13811821 - 13811659
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 302  Q
    |||||||  |||||||  ||||| |||||||||||||||||||||||||||| ||||| |||||  |||||||| | |||||||||| ||||||||||||    
T  13811821 tagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgac 13811722  T
Q  303 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 365  Q
    ||||||||| |||||| ||||||||||||| | ||||||| ||| ||||||| ||||||||||    
T  13811721 tacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 14831992 - 14831814
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||  ||| ||||| | |||||||||| | |    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || |||||||||||| ||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 15409528 - 15409710
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||| | | ||||||||||    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcg 15409627  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| ||| |||||||||| |||||| ||||||||||||||  ||||||||||| ||||| | |||||||||||||||||    
T  15409628 gggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 40145585 - 40145407
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||| ||||||||||| | | |||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||| ||| ||||||||||||| ||| ||||||| |||||||||||| ||||    
T  40145485 ccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 31009171 - 31008988
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| |||||||  |||||||| ||||||| ||||||| |||||||| ||||||||| |||||  |||||||| ||||| | |||||||||    
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgc 31009072  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | | ||||||||||||||||||| |||||| |||||||||  |||  ||||||||||| ||||| | | |||||||||||||||    
T  31009071 gggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 191 - 372
Target Start/End: Complemental strand, 6679879 - 6679698
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| ||||||   |||||| | ||||||||||||||| || || |||||||||||| ||||| ||||| ||||||||||| || |||||||     
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||| ||| ||| | | |||||||||||||||||    
T  6679779 ggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 28177910 - 28177775
Alignment:
Q  237 cccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggt 336  Q
    ||||| |||||||||||||||||| ||||| ||||||||| | || ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  28177910 cccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggt 28177811  T
Q  337 gtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||| ||||| | |||||||||||||||||    
T  28177810 gtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 188 - 372
Target Start/End: Complemental strand, 26720700 - 26720516
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||  ||||||   |||||||| ||||||||| ||||| ||||| |||||||||||| |||||  |||| ||||||||| | ||||||||    
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26720601  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || | |||| ||| | |||||||| |||||| ||| ||||| ||||||||||||| ||| ||||| | |||||||||||||||||    
T  26720600 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 188 - 372
Target Start/End: Complemental strand, 26990449 - 26990265
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||  ||||||   |||||||| ||||||||| ||||| ||||| |||||||||||| |||||  |||| ||||||||| | ||||||||    
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26990350  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || | |||| ||| | |||||||| |||||| ||| ||||| ||||||||||||| ||| ||||| | |||||||||||||||||    
T  26990349 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 188 - 300
Target Start/End: Complemental strand, 2177548 - 2177436
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| ||||||||    
T  2177548 aaggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 2177449  T
Q  288 cgaggtccacgtg 300  Q
     | | ||||||||    
T  2177448 tgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 188 - 372
Target Start/End: Original strand, 3921181 - 3921365
Alignment:
Q  188 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 287  Q
    |||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | ||||||    
T  3921181 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 3921280  T
Q  288 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    || ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  3921281 cggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 2252085 - 2252268
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||    
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 2252184  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||| | | |||||||||||||||    
T  2252185 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 6259916 - 6260101
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||| |   ||||||| ||||||| |||||||||||||| ||||||  |||| ||||| |||| |||||||||| | ||||| |    
T  6259916 aaaggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgcttct 6260015  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | |||||||| ||||| | |||| | ||||||  |||||||| ||||||||||||||||| || || | | |||||||||| ||||    
T  6260016 gtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 189 - 345
Target Start/End: Original strand, 20073433 - 20073589
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||  ||||||  ||||||||| ||||||| ||||| ||| |||| | ||||||||| ||||| ||||||||| ||||| | |||||||||    
T  20073433 aggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgc 20073532  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 345  Q
      ||||||||||   |||||  | ||||||||||| |||||||||||||||||||||    
T  20073533 agggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtca 20073589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 42414275 - 42414402
Alignment:
Q  245 ttaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtc 344  Q
    |||||||||| ||||| || || ||||| ||| | |||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |    
T  42414275 ttaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 42414374  T
Q  345 acttaagggtttctatgtatcataactc 372  Q
    || ||  ||| |||||||||||| ||||    
T  42414375 acctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 189 - 377
Target Start/End: Original strand, 39688814 - 39689002
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||| ||||| |   ||||||| ||||||| || ||| ||||||||||| |||||  ||| |||||||||| | | ||| |||    
T  39688814 aggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgc 39688913  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 377  Q
    | ||| ||  |||| || | ||| |||||| |||||||||||| || ||||||| ||||||||||| | ||||||||||||||| ||||    
T  39688914 ggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactcttaaa 39689002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 36875564 - 36875698
Alignment:
Q  224 cacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtg 323  Q
    |||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| | |||||||||| | |||||||||||         |||||| ||||    
T  36875564 cacccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgact---------atttttgtgtg 36875654  T
Q  324 ggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  36875655 ggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 191 - 372
Target Start/End: Original strand, 33825243 - 33825424
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| | |||||  |||||||| ||||| |||| |||| |||||||| ||||||||| |||||  |||  ||||||||| | ||||||||  |    
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaa 33825342  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||| |||  |||||||| ||||||||||||||||||| | |||||||| ||| ||||  | |||||| ||||| ||||    
T  33825343 ggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 21370186 - 21370048
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| || ||||  |||||| | ||||||| |||||||||  ||  | ||||||||  ||||||||||||||||||||||| || |||||||    
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgt 328  Q
     |||||||||||| || ||||| ||||||  ||||||||    
T  21370086 gggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 372
Target Start/End: Complemental strand, 9603993 - 9603813
Alignment:
Q  192 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 291  Q
    ||||||||||||||||||  |||||||| ||||||| |||||||||||| ||| || |||||| ||||| || | |||||||||| | || ||||  | |    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 9603894  T
Q  292 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||  |||| | |||||| |||||| ||| ||||| || | ||||||| |||| ||||| | | |||||||||| ||||    
T  9603893 gtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 281 - 364
Target Start/End: Original strand, 41470425 - 41470508
Alignment:
Q  281 gcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtat 364  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||  | | ||||| ||||||| ||| ||| ||| |||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 31132454 - 31132392
Alignment:
Q  262 gagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgg 324  Q
    ||||| ||||| ||| |||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  31132454 gagagaaaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 16328006 - 16327921
Alignment:
Q  267 gaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 352  Q
    |||||| ||| | |||||||| ||||| ||| |||  |||||||| ||||||||||||||||||| || ||||||| ||| |||||    
T  16328006 gaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaagg 16327921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 578 - 618
Target Start/End: Original strand, 42779650 - 42779690
Alignment:
Q  578 tcaaaatcaacataactagatgccaggaacaagtacttcgt 618  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  42779650 tcaaaatcaacgtaactagatgctaggaacaagtacttcgt 42779690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 1e-46; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 194 - 365
Target Start/End: Complemental strand, 32869856 - 32869685
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 365  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 212 - 367
Target Start/End: Original strand, 22880598 - 22880753
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||| ||||||||| | |||||||||| |||||||||||||||||||||    
T  22880598 tttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 22880697  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
     | |||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  22880698 gaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 17598732 - 17598554
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||| |||||||| |||||| ||||||||||||| | ||||||| ||| ||||||| |||||||||||| ||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 31976430 - 31976248
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | ||||||||||    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||| || ||||| |||||||| |||||| ||||||||| ||||||| ||||| ||| ||||| | |||||||||||||||||    
T  31976330 gggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 11427796 - 11427616
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcactta--agggtttctatgtatcataactc 372  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||| ||| ||  ||||| |||||||||||| ||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 15832755 - 15832577
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| |||||||||||  |||||||  ||||||||||||||| |||||||||||||||||  ||||| ||||  ||||||||||| |  ||||||  | |    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggat 15832656  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||||||||||||||||||||||| ||||||||||||| | | ||||||||| ||| ||| |||||||||||| ||||    
T  15832655 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 23128076 - 23128222
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||| | |||||||| | | ||||||||||||||||||| |||||| |    
T  23128076 atacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgt 23128175  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
    |||||||||||||| |||||| |||| ||| ||| ||||| ||||||    
T  23128176 gtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcat 23128222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 229 - 372
Target Start/End: Original strand, 6209422 - 6209565
Alignment:
Q  229 ttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgt 328  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||| ||||| |||||||||||||||||| || |||||| |||| ||||    
T  6209422 ttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgt 6209521  T
Q  329 caaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||||  |||||||| ||| ||||||| |||||||||||| ||||    
T  6209522 caaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 31952945 - 31953130
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| |||||||  |||||||| ||||| |||| |||| |||||||| ||||||||| |||||  ||| |||||||||| | || ||||    
T  31952945 aaaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgt 31953044  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | ||||||||| |||  || ||||| ||||||||||||||||||| |||||||||| ||| ||||| | ||||| |||||| ||||    
T  31953045 gtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 29858005 - 29857827
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| |||||  |||| ||||||||| | ||||| |||| | |    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||||||| |||||| ||||||||| ||| ||||||||| ||  ||| ||| |||||||||||| ||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 189 - 372
Target Start/End: Original strand, 30341277 - 30341460
Alignment:
Q  189 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 288  Q
    ||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||    
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 30341376  T
Q  289 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  30341377 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 15989960 - 15990142
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  15990060 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 187 - 372
Target Start/End: Original strand, 15507939 - 15508124
Alignment:
Q  187 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 286  Q
    ||||||||||||||| ||||||| ||||| |   ||||| ||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||    
T  15507939 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgt 15508038  T
Q  287 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    ||| ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  15508039 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 223 - 360
Target Start/End: Original strand, 31109351 - 31109488
Alignment:
Q  223 acacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgt 322  Q
    ||||||||||| | ||||||||||||||||||  |||| ||||| ||||||||| | | ||| |||| |||| |||||||||||||||| |||||| |||    
T  31109351 acacccttgtataccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgt 31109450  T
Q  323 gggtgtcaaagggtgtattgtcacttaagggtttctat 360  Q
    || ||||||||||||||||| ||| ||||||| |||||    
T  31109451 ggatgtcaaagggtgtattgccacctaagggtgtctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 190 - 372
Target Start/End: Original strand, 31110679 - 31110859
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||   ||||||   ||||||| ||||||| ||||| |||||||||||| |||||  |||| ||||||||| | |||||||||     
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     |||||| |||  ||||||||| |||||  |||| |||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  31110779 gggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 190 - 372
Target Start/End: Complemental strand, 4231730 - 4231548
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 289  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  290 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
     ||||||  || | |||||||| |||||| |||||||| ||| |||||||||| ||| ||| | | | |||| ||||||||||    
T  4231630 gggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 205 - 365
Target Start/End: Complemental strand, 946543 - 946383
Alignment:
Q  205 gacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgacta 304  Q
    ||||| ||||||| | |||||  |||||||||| |||||||||||||||| ||||| ||||| ||||||||| | |||| | ||| | |  |||||||||    
T  946543 gacactttttattgtcatacattcttgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgacta 946444  T
Q  305 cgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 365  Q
     |||||| ||||||  || |||||||||||||||||| |||| ||||| | ||||||||||    
T  946443 ggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 367
Target Start/End: Original strand, 28536428 - 28536581
Alignment:
Q  212 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 311  Q
    |||||| | ||||||||||||||| |||||||| |||||||||||||||  |||  ||||||||| | |||||||| | ||||||| ||||  |||||||    
T  28536428 tttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtca 28536525  T
Q  312 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 367  Q
     |||||| |||||||||||| || ||||||| ||| ||||| | | ||||||||||    
T  28536526 gatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 240 - 368
Target Start/End: Original strand, 9379680 - 9379808
Alignment:
Q  240 atgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgta 339  Q
    |||||||||||||||  ||||  ||| |||||||||||| || ||||| ||| ||||| || | ||||||||||||||| | |||||||||| || ||||    
T  9379680 atgcattaggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgta 9379779  T
Q  340 ttgtcacttaagggtttctatgtatcata 368  Q
    ||||||  ||||| | |||||||||||||    
T  9379780 ttgtcatctaaggatgtctatgtatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 30870183 - 30870058
Alignment:
Q  203 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 302  Q
    |||||||  |||||| | ||||||| ||||||| || ||  | ||| ||||| ||||| ||||||||||||||||| |||||||||| |||||| |||||    
T  30870183 tagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgac 30870084  T
Q  303 tacgtgtcaaatttttatgtgggtgt 328  Q
     || ||| | |||||||| |||||||    
T  30870083 cacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 372
Target Start/End: Complemental strand, 12732604 - 12732482
Alignment:
Q  250 aagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcactta 349  Q
    ||||| ||||| |||| |||||||||||| ||||| || | | ||||| |  | |||||||| |||||| |||||||||||| |  | ||||| ||||||    
T  12732604 aagagagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccactta 12732505  T
Q  350 agggtttctatgtatcataactc 372  Q
    ||  | |||||||||||| ||||    
T  12732504 agaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 22421997 - 22422042
Alignment:
Q  190 ggaaaatgttacgtagacacattttattcttatacacccttgtaca 235  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtaca 22422042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 221 - 372
Target Start/End: Original strand, 10058 - 10209
Alignment:
Q  221 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 320  Q
    ||||||||||||||| || ||||||||||||||| ||||| ||||| ||||||||| | ||||||| || ||||||||||||||||||||| ||||||||    
T  10058 atacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttat 10157  T
Q  321 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||| ||||||||| ||||||| ||| ||| ||| |||||||||||||||||    
T  10158 gtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 372
Target Start/End: Original strand, 848 - 1029
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| || ||||  |||||||  |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||     
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | | |||||||||||||||||  ||||| ||||| ||| ||||||||||||| ||| ||| | | |||||||||||| ||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 372
Target Start/End: Original strand, 848 - 1029
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| || ||||  |||||||  |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||     
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    | | |||||||||||||||||  ||||| ||||| ||| ||||||||||||| ||| ||| | | |||||||||||| ||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 194 - 372
Target Start/End: Complemental strand, 4207 - 4029
Alignment:
Q  194 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 293  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| |||||  |||| ||||||||| | ||||| |||| | |    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  294 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 372  Q
    |||||| ||||||||||| |||||| ||||||||| ||| ||||||||| ||  ||| ||| |||||||||||| ||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 191 - 342
Target Start/End: Complemental strand, 152679 - 152528
Alignment:
Q  191 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 290  Q
    ||||||||||| ||||||| ||||| |   |||||||||||||||||||||| ||||| ||||| |||||  ||| |||||||||| | |  |||||||     
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  291 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattg 342  Q
    | ||||  |||| || ||||| |||||| |||||||||||| ||||||||||    
T  152579 gatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattg 152528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 17163 - 17084
Alignment:
Q  263 agaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattg 342  Q
    |||||||||||||||| |||||||||| |||||| ||||| || ||||| |||||| ||||| |||| | || |||||||    
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattg 17084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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