View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_high_49 (Length: 355)
Name: NF14117_high_49
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_high_49 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 70 - 335
Target Start/End: Complemental strand, 33554297 - 33554025
Alignment:
| Q |
70 |
atagcagcagagataactggaacacttgttccttgcaagtctcaaaccctataaaatagccataaggccaccaatnnnnnnnnnn-------gagttggt |
162 |
Q |
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| T |
33554297 |
atagcagcagagataactggaacacttgttccttgcaagtctcaaaccctataaaatagccataaggccaccaaaaataaaaattattaaatgagttggt |
33554198 |
T |
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| Q |
163 |
ttttcagaattcagtaagaaatgtaaaagtcacccttatttttgcatatccaatatgtgttatcaagacaaatcgagtttttaagaaatgttgagagggg |
262 |
Q |
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| T |
33554197 |
ttttcagaattcagtaagaaatgtaaaagtcacccttatttttgcatatccaatatgtgttatcaagacaaatcgagtttttaagaaatgttgagagggg |
33554098 |
T |
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| Q |
263 |
cacaagaaactatttcataaaaagttcaagctcaaacagtgttgacattgatcggtatatattgtccaccaat |
335 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
33554097 |
cacaagaaactatttcataaaaagttcaagctcaaacaatgttgacattgatcggtatatattgtccaccaat |
33554025 |
T |
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