View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_high_77 (Length: 248)
Name: NF14117_high_77
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_high_77 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 5032901 - 5032660
Alignment:
| Q |
1 |
tagtacttaattagttgtgaatcttgtgataccattttgctagtggaaggaaaaaatatatgaatatgaaggacgacaaatatttatatttc-ttttacg |
99 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
5032901 |
tagtacttaaatagttgtgaatcttgtgataccattttgctagtggaaggaaaaaatatatgaatatgaaggacgacaaatatttatatttctttttacg |
5032802 |
T |
|
| Q |
100 |
cacatgttagtatggttctctctttatattactgctagagtgattctttacctatcacacataattgtttcacttaatgtgctctagttgacaattttca |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
5032801 |
cacatgttagtatggttctctctttatattactgctagagtgattctttacctatcacacataattgtttcacttaatgtg--ctagttgacaattttca |
5032704 |
T |
|
| Q |
200 |
agcacttataacaacttgtcaattttcaattactatattcttgt |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
5032703 |
agcacttataacaacttgtcaattttcaattactatattgttgt |
5032660 |
T |
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