View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_high_88 (Length: 218)
Name: NF14117_high_88
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_high_88 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 42224486 - 42224690
Alignment:
| Q |
1 |
ttattcaattaaacaagggaaatgtacacaaagcatacaagagccatattcttctttaacctagnnnnnnnngagagaaaattcttgccccaacatggca |
100 |
Q |
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| T |
42224486 |
ttattcaattaaacaagggaaatgtacacaaagcatacaagagccatattcttctttaacctagaaaaaaaagagagaaaattcttgccccaacatggca |
42224585 |
T |
|
| Q |
101 |
ttacaggcacaaatcaatnnnnnnnntcttaaatatgataaaatatttagcgcttccttaattttttcataacttcaacatttattgtcctcgtataaga |
200 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42224586 |
ttacaggcacaaatcaataaaaaaaatcttaaatatgataaaatatttagtgcttccttaattttttcataacttcaacatttattgtcctcgtataaga |
42224685 |
T |
|
| Q |
201 |
ataat |
205 |
Q |
| |
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||||| |
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| T |
42224686 |
ataat |
42224690 |
T |
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