View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_low_18 (Length: 500)
Name: NF14117_low_18
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_18 |
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Alignment Details
Target: chr6 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 21 - 491
Target Start/End: Original strand, 15595372 - 15595842
Alignment:
| Q |
21 |
agccaaactctgtcagattgaccgcacctcccaaatcttaagtgtcagacctatgagtcaggaagtggaatgttatggagcatgaaagtcaggatgaatg |
120 |
Q |
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| T |
15595372 |
agccaaactctgtcagagtgaccgcacctcccgaatcttaagtgtcagacctatgagtcaagaagtggaatgttatggagcatgaaagtcaggatgaatg |
15595471 |
T |
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| Q |
121 |
aatatttaagtgatggaaggacatttcacgaatcaaggtaatttcgaatgcatgcccaaggataagagatggaatcagatttctccagtatttatcatga |
220 |
Q |
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| T |
15595472 |
aatatttaagtgatggaaggacatttcacgaatcaaggtaatttcgaatgcatgcccaaggataagagatggaatcagatttctctagtatttttcatga |
15595571 |
T |
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| Q |
221 |
ggcagtaagttggatggactaagaaaacacaagtgcaacagtaagtggaaaatagaatctttagggtggattgaaacgagatgtgatctctcgattctag |
320 |
Q |
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| T |
15595572 |
ggtagtaagttgggtggactaagaaaacacaagtgcaacagtaagtggaaaatagaatctttagggtggattgaaacgagaggtgatctctcgattctag |
15595671 |
T |
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| Q |
321 |
ggaattaaagaaggaatgataagttaacaaggttcaataagttaatggatgaaagaagataagctaccatgatggtgggtcaaggatgagaatatgttaa |
420 |
Q |
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| T |
15595672 |
ggaattaaagaaggaataataagttaagaaggttcagtaagttaatggatgattgaagtcaagctaccatgatggtgggtcgaggatgagaatatgttaa |
15595771 |
T |
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| Q |
421 |
aggtcagccgaggtctttggatcgagtcttgaggttctactatatgagaagtatcgccaatatgatgatgt |
491 |
Q |
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| T |
15595772 |
gggtcagccgagatctttggattgagtcttgaggttctagtatatgataagtatcgccaatatgatgatgt |
15595842 |
T |
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