View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14117_low_45 (Length: 387)
Name: NF14117_low_45
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_45 |
 | |
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| [»] chr5 (2 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] scaffold0283 (1 HSPs) |
| | |
|
| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 342; Significance: 0; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 19 - 387
Target Start/End: Original strand, 17060490 - 17060859
Alignment:
| Q |
19 |
cattgatggagcaagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattatt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17060490 |
cattgatggagcaagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcaaaaattgttttggatgtaataatgaaccccattatt |
17060589 |
T |
|
| Q |
119 |
ccactacctaagaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtg |
218 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17060590 |
ccactacctaagaagggagacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcaccaaatattaaatcttgtg |
17060689 |
T |
|
| Q |
219 |
taaaagacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17060690 |
taaaagacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctgttgatcttgtc |
17060789 |
T |
|
| Q |
319 |
ggtttatggattgtttactta-tttgatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17060790 |
ggtttatggattgtttacttattttgatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
17060859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 381
Target Start/End: Original strand, 33562169 - 33562496
Alignment:
| Q |
55 |
taatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgattatt |
154 |
Q |
| |
|
|||| ||||||||||||| |||||||| ||| |||||||||| | ||| ||||||| || ||||||| | | |||||| |||| ||||| |||||| |
|
|
| T |
33562169 |
taatctgcaagaatcatcagatccatcaaaacttgttttggaaatgatactgaaccccatctttccactgtgtcaaaagggagacaatgttgtcattatt |
33562268 |
T |
|
| Q |
155 |
gatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgagttga |
254 |
Q |
| |
|
| ||| || |||| | | || ||||||||||||| ||| || ||| ||||| || ||||||| | | | ||||| |||||||||||| ||| |||| |
|
|
| T |
33562269 |
gttgattaccaaatctatcttctggaacaactgatgagaatctcaccagatattgaaccttgtgtgagaaaagaagcattgaagctagcatttgatttga |
33562368 |
T |
|
| Q |
255 |
aagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattg-tttacttatttgatcaagatga |
353 |
Q |
| |
|
|||||||||| |||| ||||||||||| || |||| |||||| || ||||| || | ||||| ||||| |||| || | | |||||| ||||||| |
|
|
| T |
33562369 |
aagctaacatgaaagaaaatactgaattttttttggcggttcttggttttctgatgcttttgtcaatttataaattgcttgattcttttgatgaagatga |
33562468 |
T |
|
| Q |
354 |
agtcttggatctttttgcatctgttgct |
381 |
Q |
| |
|
||| ||||| |||||||||| ||||||| |
|
|
| T |
33562469 |
agttttggagctttttgcatttgttgct |
33562496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 22 - 382
Target Start/End: Original strand, 44624626 - 44624990
Alignment:
| Q |
22 |
tgatggagcaagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattcca |
121 |
Q |
| |
|
||||||||||||||||||| ||||||||| | |||||||| ||||||||| |||||| | ||||||||||||||| ||||| ||||||| ||||| ||| |
|
|
| T |
44624626 |
tgatggagcaagtgaggaaattgacattcttgataatttgcgagaatcatcagatccagcaaaaattgttttggatataatactgaaccccattatccca |
44624725 |
T |
|
| Q |
122 |
ctacctaagaagggaaacaaagttgtgattattgat---gaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtg |
218 |
Q |
| |
|
|| |||||||| ||| |||||| ||||||||||||| ||||||||||||| | |||||||| ||||||||| ||| || |||||||||||| |||||| |
|
|
| T |
44624726 |
cttcctaagaaaggagacaaagctgtgattattgatgatgaaagccgcatctatctgctagaaaaactgatgacaatctcaccaaatattaaaccttgtg |
44624825 |
T |
|
| Q |
219 |
taaaagacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtc |
318 |
Q |
| |
|
||| ||| ||||| ||||||||||| | |||||||||||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
44624826 |
taagagatgaagcattgaagctagcgcgtgagttgaaagctaacatgaaagaaaatactgaaaattatttggaggttctcggatttctattgattttgtc |
44624925 |
T |
|
| Q |
319 |
ggtttatggattgtttactta-tttgatcaagatgaagtcttggatctttttgcatctgttgctg |
382 |
Q |
| |
|
| ||||||||||| |||||| |||||| |||||||||||| | ||||||| ||||||||||| |
|
|
| T |
44624926 |
gatttatggattgcatacttattttgatgaagatgaagtctaaaagctttttggatctgttgctg |
44624990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 359
Target Start/End: Original strand, 44615250 - 44615594
Alignment:
| Q |
19 |
cattgatggagcaagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattatt |
118 |
Q |
| |
|
||||||||| |||| |||||| || |||||||| |||||||| ||||||||| |||||| | ||| ||||||||||| ||||| | ||||||| ||| |
|
|
| T |
44615250 |
cattgatggcacaagcgaggaaattggcattctagataatttgcgagaatcatcagatccagcaaaacttgttttggatataatactaaaccctacgatt |
44615349 |
T |
|
| Q |
119 |
ccactacctaagaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaa---tattaaatctt |
215 |
Q |
| |
|
||||| |||||||| ||| |||||| ||||||||||||||| || | |||| | |||||||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
44615350 |
ccactgcctaagaaaggagacaaagcggtgattattgatgaaggctggatctatctgctagaacaactgatgataatctcaccaaatattattaaatctt |
44615449 |
T |
|
| Q |
216 |
gtgtaaaagacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatctt |
315 |
Q |
| |
|
|||||| ||| ||||| ||||||||||| |||||||||||||||||| |||| |||||| ||| |||| ||||||| ||| |||||||||||||| || |
|
|
| T |
44615450 |
gtgtaagagatgaagcgttgaagctagcgtgtgagttgaaagctaacatgaaagaaaataccgaaaattctttggaggctcttggatttctattgatttt |
44615549 |
T |
|
| Q |
316 |
gtcggtttatggattgtttactta-tttgatcaagatgaagtctt |
359 |
Q |
| |
|
||| |||| |||||| ||| ||| |||||| ||||||||||||| |
|
|
| T |
44615550 |
atcgatttacggattggttaattactttgatgaagatgaagtctt |
44615594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 44 - 381
Target Start/End: Original strand, 39152928 - 39153266
Alignment:
| Q |
44 |
gacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaag |
143 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||||| | |||||||| |||||| ||||| |||||| |||||||||| |||||| ||| || | | |
|
|
| T |
39152928 |
gacattctagataacctgcaagaatcatcagatccagcaaaaattgtgttggatataatacagaacccaattattccacggtataagaacggagaccatg |
39153027 |
T |
|
| Q |
144 |
ttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagc |
243 |
Q |
| |
|
||||||||| |||| ||| |||||||| |||||||||||||||||| ||| || || || |||||| ||||||||| ||| ||||| ||||| || || |
|
|
| T |
39153028 |
ctgtgattatagatggtagctgcatctttctgctagaacaactgatgagaatctcaccgaagattaaaccttgtgtaagagaagaagcattgaaactcgc |
39153127 |
T |
|
| Q |
244 |
acatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttacttattt- |
342 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||||||||| |||| |||| |||||| || |||||| || | |||||| ||||||||||| |||||| ||| |
|
|
| T |
39153128 |
acatgatttgaaagctaaaataaaagaaaatactgaaaattctttggtggttcttggttttctactggttttgtcgatttatggattggttacttctttc |
39153227 |
T |
|
| Q |
343 |
gatcaagatgaagtcttggatctttttgcatctgttgct |
381 |
Q |
| |
|
||| |||||||||||||||| |||||||||| ||||||| |
|
|
| T |
39153228 |
gataaagatgaagtcttggagctttttgcatttgttgct |
39153266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 30 - 387
Target Start/End: Original strand, 39138501 - 39138856
Alignment:
| Q |
30 |
caagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaa |
129 |
Q |
| |
|
||||||| ||| ||| ||||||||||||| ||||||||||||| |||||| | ||| ||||||||||| ||||| ||| || |||||||||| ||| |
|
|
| T |
39138501 |
caagtgatgaaactgtcattctagttaatctgcaagaatcatcagatccagcaaaagttgttttggatataatacagaagccaattattccacggtgtaa |
39138600 |
T |
|
| Q |
130 |
gaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaa |
229 |
Q |
| |
|
||| ||| | | | ||||||||||||||| || |||||||| |||||||||||||||||| ||| || || || |||||| || ||||| ||| ||| |
|
|
| T |
39138601 |
gaatggagaacatgctgtgattattgatgatggctgcatctttctgctagaacaactgatgagaatctcaccgaagattaaacctgatgtaagagaagaa |
39138700 |
T |
|
| Q |
230 |
gctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggat |
329 |
Q |
| |
|
|| ||||||||||||| | | ||||||||||||| || |||||||||| |||| ||| ||||||||| |||||| |||| ||||| ||||||| || |
|
|
| T |
39138701 |
gcattgaagctagcacttaatctgaaagctaacatgaa---aaatactgaaaattctctggtggttctcggttttctactgattttgtcagtttatgaat |
39138797 |
T |
|
| Q |
330 |
tgtttactta-tttgatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
|| ||||||| |||||| |||||||||||||||| ||||| ||| ||||||| ||||| |
|
|
| T |
39138798 |
tgcttacttattttgatgaagatgaagtcttggagcttttcacatttgttgctcagcac |
39138856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 64 - 387
Target Start/End: Complemental strand, 39396945 - 39396621
Alignment:
| Q |
64 |
agaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgattattgatgaaagc |
163 |
Q |
| |
|
||||||||| |||||||| | | ||||||||||| ||||| ||||| ||||||||||| |||||||||| |||| | |||| ||||||| || ||| |
|
|
| T |
39396945 |
agaatcatcagatccatcaagacttgttttggatataatacaaaaccccattattccactgtgtaagaagggagacaatggtgtggttattgaggatagc |
39396846 |
T |
|
| Q |
164 |
cgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgagttgaaagctaaca |
263 |
Q |
| |
|
| ||||| |||||||| ||||||||| ||| || |||| ||||| | ||||||||| ||| ||||| |||||||||||||||| |||| |||| ||| |
|
|
| T |
39396845 |
cacatctacgtgctagaagaactgatgagaatctcaccaactattagaccttgtgtaagagaagaagcactgaagctagcacatgatttgagagcttaca |
39396746 |
T |
|
| Q |
264 |
taaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttacttattt-gatcaagatgaagtcttgga |
362 |
Q |
| |
|
| | || |||||||||| |||| |||| |||||| || ||| | ||| | ||||| ||||||||||| |||||| ||| ||| |||||||||| ||||| |
|
|
| T |
39396745 |
ttagagaaaatactgaaaattctttggcggttcttggttttttgttgcttttgtcaatttatggattgcttacttctttcgatgaagatgaagttttgga |
39396646 |
T |
|
| Q |
363 |
tctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
||||||||||| |||||| ||||| |
|
|
| T |
39396645 |
gctttttgcatcggttgctcagcac |
39396621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 44895434 - 44895076
Alignment:
| Q |
30 |
caagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaa |
129 |
Q |
| |
|
|||||||| || ||| |||||||||| | ||| ||||||||| |||| | ||| ||||||||||| ||||| |||||||| ||| ||||| ||| |
|
|
| T |
44895434 |
caagtgagcaaaatgaaattctagttactctgcgagaatcatcaaatcctgcaaaacttgttttggatataatacagaaccctagtatgccactgagtaa |
44895335 |
T |
|
| Q |
130 |
gaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaa |
229 |
Q |
| |
|
||||| |||| | | || |||||||||| | ||||||| | |||||||| ||||||| |||||| |||| ||||||| || |||||| ||| || |
|
|
| T |
44895334 |
gaaggatgacaatgatttggttattgatgattggcgcatctatctgctagaaacactgatgggaatgtcaccaattattaaacctcgtgtaagagaacaa |
44895235 |
T |
|
| Q |
230 |
gctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggat |
329 |
Q |
| |
|
|| ||||||||||||||| | || |||||||||||||||| |||||||||| |||| |||| |||||| || |||||| || | ||||| ||||||||| |
|
|
| T |
44895234 |
gcattgaagctagcacataaattcaaagctaacataaaaggaaatactgaaaattctttggtggttcttggttttctactgcttttgtcaatttatggat |
44895135 |
T |
|
| Q |
330 |
tgtttacttattt-gatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
|| |||||| ||| ||| ||| ||||| ||||| |||||||||| ||||||| ||||| |
|
|
| T |
44895134 |
tgattacttctttcgatgaaggcgaagttttggagctttttgcatttgttgctcagcac |
44895076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 387
Target Start/End: Complemental strand, 39380723 - 39380463
Alignment:
| Q |
128 |
aagaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacg |
227 |
Q |
| |
|
||||||||| |||| | ||||||| || |||| |||||||||||| |||||||||||||||||| | | || || |||||| || |||||||| ||| | |
|
|
| T |
39380723 |
aagaagggagacaatgctgtgattttttatgatagccgcatctttctgctagaacaactgatgagagtctcaccgaatattgaagattgtgtaagagaag |
39380624 |
T |
|
| Q |
228 |
aagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatgg |
327 |
Q |
| |
|
|||| ||| |||||||| ||| ||||||||| |||||| || ||||||||| |||| ||| |||||| ||||||||| || | ||||| ||||||| |
|
|
| T |
39380623 |
aagcactgacgctagcacttgatttgaaagcttacataagagagaatactgaagattctgtggcggttcttggatttctactgcttttgtcaatttatgg |
39380524 |
T |
|
| Q |
328 |
attgtttacttattt-gatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
|||| |||||| ||| ||| |||||||| | ||||| |||||||||| |||||| ||||| |
|
|
| T |
39380523 |
attgcttacttctttcgatgaagatgaaattttggagctttttgcattggttgctcagcac |
39380463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 387
Target Start/End: Original strand, 39216537 - 39216870
Alignment:
| Q |
55 |
taatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgattatt |
154 |
Q |
| |
|
|||||||| ||| ||||| |||||||| | | ||||||||||| | ||| |||||||| ||||| | | |||||||||| |||| | |||||||||| |
|
|
| T |
39216537 |
taatttgctagactcatcagatccatcaagacttgttttggatatgatacagaaccctactattcaattgtgtaagaagggagacaatgctgtgattatt |
39216636 |
T |
|
| Q |
155 |
gatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgagttga |
254 |
Q |
| |
|
| ||| || || | | ||||||||||||||||| ||| || || |||||||| ||||||||| ||| ||||| |||||||||||| ||| |||| |
|
|
| T |
39216637 |
gctgattaccatatttattcgctagaacaactgatgaaaatctcacctcatattaaaccttgtgtaagagaagaagcattgaagctagcatttgatttga |
39216736 |
T |
|
| Q |
255 |
aagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttactt-atttgatcaagatga |
353 |
Q |
| |
|
|| ||||||| | | ||||||| || |||| |||| ||||||||| ||||| || | ||||| ||||||||||| |||||| |||| | ||||||| |
|
|
| T |
39216737 |
aatctaacatgagtgaaaatactaaaaattctttggtggttctcggttttcttctgcttttgtcaatttatggattggttacttcttttggtgaagatga |
39216836 |
T |
|
| Q |
354 |
agtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
39216837 |
agttttggagctttttgcatctgttgctcagcac |
39216870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 39473097 - 39472733
Alignment:
| Q |
30 |
caagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaa |
129 |
Q |
| |
|
||||||| ||| |||||||||||||| || ||||||||||||| |||||| | ||| ||||| ||||| ||||| ||||||| |||||||||| ||| |
|
|
| T |
39473097 |
caagtgatgaaactgacattctagttgatctgcaagaatcatcagatccagcaaaatttgttctggatataatactgaacccgattattccacggtgtaa |
39472998 |
T |
|
| Q |
130 |
gaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataat------gtcgccaaatattaaatcttgtgtaaaa |
223 |
Q |
| |
|
||||||| || | | |||||||||||||| ||| ||||||| || | ||||| ||||||| ||| ||| | || |||| ||||||||||| |
|
|
| T |
39472997 |
gaagggagaccatgctgtgattattgatggtagcaacatctttctgttggaacagctgatgaaaatctcaccgtcactgaagattagcccttgtgtaaaa |
39472898 |
T |
|
| Q |
224 |
gacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggttt |
323 |
Q |
| |
|
| || || |||||||| |||| ||| ||||||| |||||| |||| |||||||||| |||| |||| ||||| || |||||| || | ||||| ||| |
|
|
| T |
39472897 |
aaagacgcattgaagctcgcacttgatttgaaagttaacatgaaagaaaatactgaaaattctttggtagttcttggttttctactgcttttgtcaattt |
39472798 |
T |
|
| Q |
324 |
atggattgtttactt-atttgatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
||| |||| |||||| |||||| |||||||||||||||| || || |||| ||||||| ||||| |
|
|
| T |
39472797 |
atgaattgcttacttcttttgatgaagatgaagtcttggagctcttcgcatttgttgctcagcac |
39472733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 387
Target Start/End: Original strand, 39370993 - 39371330
Alignment:
| Q |
51 |
tagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgat |
150 |
Q |
| |
|
||||| || ||| ||||||||| |||||||| | | ||||||||||| | ||| ||| | ||| ||||||| |||||||||| |||| ||||| || |
|
|
| T |
39370993 |
tagttgatctgctagaatcatcagatccatcaagatttgttttggatatgatacagaataccattgttccactgagtaagaagggagacaatgttgtaat |
39371092 |
T |
|
| Q |
151 |
tattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgag |
250 |
Q |
| |
|
||||| ||| || ||| | ||||||||||||| |||| ||| || ||||||||| | ||||||||| ||| ||||| ||||||||||||| ||| |
|
|
| T |
39371093 |
tattgctgattaccaaatcctgctgctagaacaacttatgaaaatctcaccaaatattgagccttgtgtaagagatgaagcattgaagctagcacttgat |
39371192 |
T |
|
| Q |
251 |
ttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttactt-atttgatcaag |
349 |
Q |
| |
|
||||||| ||||| |||| ||||| | || || | |||| |||||| || ||||||||| | ||||| |||||||||| |||||| |||||| ||| |
|
|
| T |
39371193 |
atgaaagccaacatgaaagaaaatagtaaaaatcctttggtggttcttggttttctattgcttttgtcaaattatggattggttacttcttttgatgaag |
39371292 |
T |
|
| Q |
350 |
atgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
||||| | ||||| |||||||||| ||||||||||||| |
|
|
| T |
39371293 |
atgaacttttggagctttttgcatttgttgctgagcac |
39371330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 387
Target Start/End: Complemental strand, 39421413 - 39421155
Alignment:
| Q |
127 |
taagaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagac |
226 |
Q |
| |
|
|||||||||| |||| | || ||||||||| || | || ||||||| |||||||||||||||||| ||| || ||| |||||||| ||||||||||||| |
|
|
| T |
39421413 |
taagaagggagacaatgatgcgattattgaagagaaccacatctttctgctagaacaactgatgaaaatctcaccacatattaaaacttgtgtaaaagaa |
39421314 |
T |
|
| Q |
227 |
gaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatg |
326 |
Q |
| |
|
||||| |||||||| || | ||| ||||||||||| || ||| |||||||||| || || ||||||||| |||||| || | ||||| |||| |
|
|
| T |
39421313 |
gaagcattgaagctcgctcttgatttgaaagctaatatggaagaaaatactgaaaataattt---ggttctcggttttctactgcttttgtcaatttacc |
39421217 |
T |
|
| Q |
327 |
gattgtttacttattt-gatcaagatgaagtcttggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
|||| |||||||||| || |||||||||| ||||| |||||||||| ||||||| ||||| |
|
|
| T |
39421216 |
aattggttacttatttcaatgaagatgaagtgttggagctttttgcatttgttgctcagcac |
39421155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 381
Target Start/End: Complemental strand, 39387800 - 39387469
Alignment:
| Q |
51 |
tagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgat |
150 |
Q |
| |
|
|||||| | ||| |||||||||||| ||||| ||| ||||||||||| | ||| |||||||| |||||||||| | | |||| |||| |||||| |
|
|
| T |
39387800 |
tagttagtatgcgagaatcatcggacccatcaaaacttgttttggatatgatattgaaccctgttattccactgtgtcaaaaggttgacaattctgtgat |
39387701 |
T |
|
| Q |
151 |
tattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgag |
250 |
Q |
| |
|
||||| ||| || ||| |||||||||||||||||||| || || ||||| ||| || ||||||||||| | ||||| ||||||||||| | ||| |
|
|
| T |
39387700 |
tattgctgattaccaaatccatatgctagaacaactgatgagaacctcaccaaaaattgaaacttgtgtaaaaaaagaagcattgaagctagcgcgtgat |
39387601 |
T |
|
| Q |
251 |
ttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttactta-tttgatcaag |
349 |
Q |
| |
|
|| ||||||||||| |||| |||||||||| |||| |||| ||||| || ||||| || | ||||| ||||||| || || ||| ||||| ||| |
|
|
| T |
39387600 |
ttaaaagctaacatgaaagaaaatactgaaaattctttggccgttcttggttttctgctgcttttgtcaatttatgggctgcttgattattttgacgaag |
39387501 |
T |
|
| Q |
350 |
atgaagtcttggatctttttgcatctgttgct |
381 |
Q |
| |
|
||||||| ||||| |||||||||| ||||||| |
|
|
| T |
39387500 |
atgaagttttggagctttttgcatttgttgct |
39387469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 381
Target Start/End: Complemental strand, 39413183 - 39413004
Alignment:
| Q |
200 |
ccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcg |
299 |
Q |
| |
|
||||||| ||| ||||||||||||| ||| ||||||||||||| ||| |||||||||||| | |||| |||||| ||| | || |||| |||||| |
|
|
| T |
39413183 |
ccaaataacaaaccttgtgtaaaaga---agcattgaagctagcacttgatttgaaagctaacttgaaagaaaataccgaaaactctttggcggttctta |
39413087 |
T |
|
| Q |
300 |
gatttctattgatcttgtcggtttatggattgtttacttattt-gatcaagatgaagtcttggatctttttgcatctgttgct |
381 |
Q |
| |
|
| ||||| ||| | ||||| |||| ||||||| |||||| ||| ||| |||||||| ||||||| |||||||||| ||||||| |
|
|
| T |
39413086 |
gttttctgttgcttttgtcagtttgtggattggttacttttttggatgaagatgaaatcttggagctttttgcatttgttgct |
39413004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 381
Target Start/End: Complemental strand, 39196816 - 39196485
Alignment:
| Q |
51 |
tagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgat |
150 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| ||| |||||||||| | ||| ||||||| || ||||||| | |||||| | || | |||| | |
|
|
| T |
39196816 |
tagttaatctgcaagaatcatcagatccatcaaaacttgttttggaaatgatactgaaccccatcattccacagtgggaaaagggagataatgctgtggt |
39196717 |
T |
|
| Q |
151 |
tattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgag |
250 |
Q |
| |
|
||||| ||| || |||| | |||| ||||||||||||| ||| || ||| |||||||| ||||||| | | | ||||| |||||||||||| ||| |
|
|
| T |
39196716 |
tattgttgattaccaaatctatctgctggaacaactgatgagaatctcaccagatattaaaccttgtgtgagaaaagaagcattgaagctagcatttgat |
39196617 |
T |
|
| Q |
251 |
ttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattg-tttacttatttgatcaag |
349 |
Q |
| |
|
|||||||||||||| || | ||||||||| |||| |||| |||||| || ||||| || | ||||| ||||| |||| || | | |||||| ||| |
|
|
| T |
39196616 |
ttgaaagctaacatgaatgacaatactgaaaattctttggcggttcttggctttctgctgcttttgtcaatttataaattgcttgattcttttgatgaag |
39196517 |
T |
|
| Q |
350 |
atgaagtcttggatctttttgcatctgttgct |
381 |
Q |
| |
|
||||||| ||||| |||||||||| ||||||| |
|
|
| T |
39196516 |
atgaagttttggagctttttgcatttgttgct |
39196485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 256
Target Start/End: Original strand, 39099442 - 39099668
Alignment:
| Q |
30 |
caagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaa |
129 |
Q |
| |
|
||||||| ||| |||| ||||||| |||| |||||| || ||| |||||||| ||| | ||||||||| ||||| ||| || ||||||| | ||| |
|
|
| T |
39099442 |
caagtgacgaaactgaaattctagataatctgcaaggattatcagatccatcaaaagtcgttttggatataatacagaatcccattattcaaaagtataa |
39099541 |
T |
|
| Q |
130 |
gaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaa |
229 |
Q |
| |
|
|| |||| |||| | ||| |||||||||||||| ||| || |||| ||||||||||||| ||| || ||| |||| ||| ||||||||| ||| ||| |
|
|
| T |
39099542 |
gatgggagacaatgctgtaattattgatgaaagagacattcttctgctcgaacaactgatgagaatctcaccacatatcaaaccttgtgtaagagaagaa |
39099641 |
T |
|
| Q |
230 |
gctttgaagctagcacatgagttgaaa |
256 |
Q |
| |
|
|| ||||||| |||| | |||||||| |
|
|
| T |
39099642 |
gcgatgaagctggcacttaagttgaaa |
39099668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 325
Target Start/End: Complemental strand, 39206048 - 39205774
Alignment:
| Q |
51 |
tagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgat |
150 |
Q |
| |
|
|||||||| ||||||||||| | |||||||| ||| |||||||||| | ||| ||||||| || | |||||| | |||||| | || |||||||| |
|
|
| T |
39206048 |
tagttaatctgcaagaatcagcagatccatcaaaacttgttttggaaatgatactgaaccccatcactccactgtgccaaaagggagataatgttgtgat |
39205949 |
T |
|
| Q |
151 |
tattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgag |
250 |
Q |
| |
|
||||| ||| || || | | |||| ||||||||||||| ||| || ||| |||| || ||||||| | ||| |||| |||||||||||| ||| |
|
|
| T |
39205948 |
tattgctgattaccaaatatatctgcttgaacaactgatgagaatctcaccagttattgaaccttgtgtgagagaaaaagcattgaagctagcatttgac |
39205849 |
T |
|
| Q |
251 |
ttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttat |
325 |
Q |
| |
|
||||||||||| || |||| |||||||||| |||| ||| |||||| || |||||| || | |||||| ||||| |
|
|
| T |
39205848 |
ttgaaagctaagatgaaagaaaatactgaaaattctatggcggttcttggttttctactgcttttgtcgatttat |
39205774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 266
Target Start/End: Original strand, 39604171 - 39604407
Alignment:
| Q |
30 |
caagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaa |
129 |
Q |
| |
|
||||||| ||| |||| ||||||| |||| |||||| |||||| |||||||| ||| ||||||||||| ||||| ||| || ||||||| | ||| |
|
|
| T |
39604171 |
caagtgacgaaactgaaattctagataatctgcaaggatcatcagatccatcaaaagttgttttggatataatacagaatcccattattcaaaagtataa |
39604270 |
T |
|
| Q |
130 |
gaagggaaacaaagttgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaa |
229 |
Q |
| |
|
|| |||| |||| | ||| ||||||||||| || ||| || |||| |||||||||||| ||| ||| |||||||| || |||||| ||| ||| |
|
|
| T |
39604271 |
gatgggagacaatgctgtaattattgatgatagagacattcttctgctcaaacaactgatgagaatcaaaccacatattaaacctcgtgtaagagaagaa |
39604370 |
T |
|
| Q |
230 |
gctttgaagctagcacatgagttgaaagctaacataa |
266 |
Q |
| |
|
|| |||||||||||| | | |||||| ||||||||| |
|
|
| T |
39604371 |
gcaatgaagctagcacttaatttgaaatctaacataa |
39604407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 44749732 - 44749786
Alignment:
| Q |
116 |
attccactacctaagaagggaaacaaagttgtgattattgatgaaagccgcatct |
170 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||||||||||||||| ||||||||| |
|
|
| T |
44749732 |
attccactgcctaagaagggtgacaaagctgtgattattgatgaaggccgcatct |
44749786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 381
Target Start/End: Complemental strand, 39478418 - 39478270
Alignment:
| Q |
233 |
ttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgt |
332 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| | || |||||||||| |||| | || ||||| | |||||| || | ||||| ||||||||||| |
|
|
| T |
39478418 |
ttgaagctagcacatgatttgaaagcttacatcagagaaaatactgaaaattcttcggcagttcttgattttctactgcttttgtcaatttatggattgc |
39478319 |
T |
|
| Q |
333 |
ttacttattt-gatcaagatgaagtcttggatctttttgcatctgttgct |
381 |
Q |
| |
|
|||||| ||| || ||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
39478318 |
ttacttctttcgaagaaggtgaagttttgga-gtttttgcatctgttgct |
39478270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 39223590 - 39223661
Alignment:
| Q |
51 |
tagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccac |
122 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| ||| |||||||||| | ||| ||||||| || ||||||| |
|
|
| T |
39223590 |
tagttaatctgcaagaatcatcagatccatcaaaacttgttttggaaatgatactgaaccccatcattccac |
39223661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 266
Target Start/End: Complemental strand, 39493647 - 39493530
Alignment:
| Q |
149 |
attattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatg |
248 |
Q |
| |
|
||||||||||| |||| ||| || |||| ||| |||||| || ||| || ||| |||||| | || ||||||||| ||||| |||||||||||| || |
|
|
| T |
39493647 |
attattgatgatagccacattcttctgctcgaagaactgaggaaaatctcaccagatattagacctcatgtaaaagaagaagcaatgaagctagcacttg |
39493548 |
T |
|
| Q |
249 |
agttgaaagctaacataa |
266 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
39493547 |
atatgaaagctaacataa |
39493530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 214 - 379
Target Start/End: Original strand, 44730154 - 44730320
Alignment:
| Q |
214 |
ttgtgtaaaagacgaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatc |
313 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
44730154 |
ttgtgtaagagatgaagctttgaagctagcacatgagttgaaagctaacataaaagaaaatactgaaaattcttaggaggttctcggatttctattgatt |
44730253 |
T |
|
| Q |
314 |
ttgtcggtttatggattgtttactta-tttgatcaagatgaagtcttggatctttttgcatctgttg |
379 |
Q |
| |
|
||| || ||||| ||||| ||||||| |||||| ||||||||||| || |||| |||||||||| |
|
|
| T |
44730254 |
ttgacgatttatagattgcttacttactttgatggagatgaagtctctgagctttacgcatctgttg |
44730320 |
T |
|
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Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 379
Target Start/End: Original strand, 45342935 - 45343170
Alignment:
| Q |
145 |
tgtgattattgatgaaagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagca |
244 |
Q |
| |
|
|||||||||| |||||| | ||||| | | |||||||||||||||| ||| | ||||| ||||||| ||||||||| ||| ||||| || ||||||||| |
|
|
| T |
45342935 |
tgtgattattagtgaaaggcacatctatctcctagaacaactgatgagaatcttgccaagtattaaaccttgtgtaagagaagaagcattcaagctagca |
45343034 |
T |
|
| Q |
245 |
catgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttactt-atttg |
343 |
Q |
| |
|
| |||||||||||||||| | |||| |||||||||| | |||||| | ||||| || |||||| |||| ||||| || ||| |||| |||||| |||| |
|
|
| T |
45343035 |
cttgagttgaaagctaacgtgaaaggaaatactgaaaaatcattgaacgttcttggttttctactgattttgtcaattcatgtattgcttacttcttttg |
45343134 |
T |
|
| Q |
344 |
atcaagatgaagtcttggatctttttgcatctgttg |
379 |
Q |
| |
|
|| |||||||||||||||| ||||||| |||||||| |
|
|
| T |
45343135 |
ataaagatgaagtcttggagctttttgtatctgttg |
45343170 |
T |
|
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Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 227 - 383
Target Start/End: Complemental strand, 44950025 - 44949868
Alignment:
| Q |
227 |
gaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatg |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| ||||||| || |||| |||||||||||| ||||||||||||| | || |||||| |
|
|
| T |
44950025 |
gaagctttgaagctagcacatgagttgaaatttaaaataaaagaaaatactaaaaattctttggaggttctcagatttctattgattataacgatttatg |
44949926 |
T |
|
| Q |
327 |
gattgtttactta-tttgatcaagatgaagtcttggatctttttgcatctgttgctga |
383 |
Q |
| |
|
||||| ||||||| ||||||| |||||| |||| | |||| ||||||||||||||| |
|
|
| T |
44949925 |
gattgcttacttactttgatcgagatgatgtctctaagctttatgcatctgttgctga |
44949868 |
T |
|
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Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 44950177 - 44950036
Alignment:
| Q |
49 |
tctagttaatttgcaagaatcatcggatccatcgaaaattgttttggatgtaataat-ga--accctattattccactacctaagaagggaaacaaagtt |
145 |
Q |
| |
|
||||||| |||||| ||||||||| ||| | ||||||||||||||||| ||||| | || |||| || ||||| | |||||||||||| |||||| | |
|
|
| T |
44950177 |
tctagtttatttgcgagaatcatcagatatagcgaaaattgttttggatataatactagacgaccccatatttccattgcctaagaagggagacaaagct |
44950078 |
T |
|
| Q |
146 |
gtgattattgatgaaagccgcatctttatgctagaacaactg |
187 |
Q |
| |
|
||||||||||||||||||||| ||| | | |||||||||||| |
|
|
| T |
44950077 |
gtgattattgatgaaagccgcgtctatcttctagaacaactg |
44950036 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 44730065 - 44730142
Alignment:
| Q |
20 |
attgatggagcaagtgaggaatctgacattctagttaatttgcaagaatcatcggatccatcgaaaattgttttggat |
97 |
Q |
| |
|
||||||||| |||||||| ||||||||| ||||||| |||||| |||||||||||||| | ||||||| ||||||||| |
|
|
| T |
44730065 |
attgatggaacaagtgagaaatctgacactctagtttatttgcgagaatcatcggatctagcgaaaatagttttggat |
44730142 |
T |
|
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Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 387
Target Start/End: Original strand, 19808896 - 19809113
Alignment:
| Q |
168 |
tctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgagttgaaagctaacataaa |
267 |
Q |
| |
|
||||| |||||||||||||||||| ||| || || || |||||| || |||||| ||| ||| | ||||||||||||| ||| |||||||||||||| || |
|
|
| T |
19808896 |
tctttctgctagaacaactgatgagaatctcaccgaagattaaacctggtgtaagagaagaaacattgaagctagcacttgatttgaaagctaacatgaa |
19808995 |
T |
|
| Q |
268 |
agcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttactta-tttgatcaagatgaagtcttggatctt |
366 |
Q |
| |
|
|| ||||||| |||| ||| |||||| || |||||| || | ||||| ||||||| |||| ||||||| |||||| |||||||||||||||| ||| |
|
|
| T |
19808996 |
---aagtactgaaaattctctggtggttcttggttttctactgcttttgtcagtttatgaattgcttacttattttgatgaagatgaagtcttggagctt |
19809092 |
T |
|
| Q |
367 |
tttgcatctgttgctgagcac |
387 |
Q |
| |
|
|| |||| ||||||| ||||| |
|
|
| T |
19809093 |
ttcgcatttgttgctcagcac |
19809113 |
T |
|
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Target: scaffold0283 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0283
Description:
Target: scaffold0283; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 227 - 383
Target Start/End: Complemental strand, 6005 - 5848
Alignment:
| Q |
227 |
gaagctttgaagctagcacatgagttgaaagctaacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatg |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| ||||||| || |||| |||||||||||| ||||||||||||| | || |||||| |
|
|
| T |
6005 |
gaagctttgaagctagcacatgagttgaaatttaaaataaaagaaaatactaaaaattctttggaggttctcagatttctattgattataacgatttatg |
5906 |
T |
|
| Q |
327 |
gattgtttactta-tttgatcaagatgaagtcttggatctttttgcatctgttgctga |
383 |
Q |
| |
|
||||| ||||||| ||||||| |||||| |||| | |||| ||||||||||||||| |
|
|
| T |
5905 |
gattgcttacttactttgatcgagatgatgtctctaagctttatgcatctgttgctga |
5848 |
T |
|
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Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 387
Target Start/End: Original strand, 16114252 - 16114580
Alignment:
| Q |
60 |
tgcaagaatcatcggatccatcgaaaattgttttggatgtaataatgaaccctattattccactacctaagaagggaaacaaagttgtgattattgatga |
159 |
Q |
| |
|
||||||||||| | |||||||| | | ||||||||||| ||||| |||||| || |||||| |||||||||| |||| | ||||||||||||||| |
|
|
| T |
16114252 |
tgcaagaatcagcagatccatcaagacttgttttggatataatacagaaccccggtactccactgtgtaagaagggagacaatgctgtgattattgatga |
16114351 |
T |
|
| Q |
160 |
aagccgcatctttatgctagaacaactgatgataatgtcgccaaatattaaatcttgtgtaaaagacgaagctttgaagctagcacatgagttgaaagct |
259 |
Q |
| |
|
| ||| ||||| | || ||||| ||||||||| ||| || |||| ||||||| || |||||| ||| |||| ||||||||||| | || ||||||||| |
|
|
| T |
16114352 |
atgccacatctatctgttagaagaactgatgagaatatcaccaactattaaacctcgtgtaagagaaaaagcattgaagctagcgcgcgatttgaaagct |
16114451 |
T |
|
| Q |
260 |
aacataaaagcaaatactgaatattcattggaggttctcggatttctattgatcttgtcggtttatggattgtttacttattt-gatcaagatgaagtct |
358 |
Q |
| |
|
|||| | || |||||| || |||||| || ||| | || ||| | || | ||||| |||||||||||| | |||||||| ||| || ||||| | |
|
|
| T |
16114452 |
tacatgagagagaatactaaaaattcatcggctgttgttggttttatgctgcttttgtcagtttatggattgctaacttatttcgataaatgcgaagttt |
16114551 |
T |
|
| Q |
359 |
tggatctttttgcatctgttgctgagcac |
387 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |
|
|
| T |
16114552 |
tggagctttttgcatctgttgctcagcac |
16114580 |
T |
|
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