View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_low_49 (Length: 369)
Name: NF14117_low_49
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 44676348 - 44676705
Alignment:
| Q |
1 |
ttctctctatgccctttgttccatttgtgttggtgtctttgtcccccaccactctttcattaatcacagccacattttcatcattactttcttttacctc |
100 |
Q |
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| T |
44676348 |
ttctctctatgccctttgttccatttgtgttggtgtctttgtcccccaccactatttcattaatcacaaccacattttcatcattactttcttttacctc |
44676447 |
T |
|
| Q |
101 |
ttccacctccaaagcatccatgataatatcattaaaatctaacaactcaccatcattaatgaccttcagatctggtccaaacatacggtcacaatcagct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676448 |
ttccacctccaaagcatccatgataatatcattaaaatctaacaactcaccatcattaatgaccttcagatctggtccaaacatacggtcacaatcagct |
44676547 |
T |
|
| Q |
201 |
tcaatatcattattttcaccactagaacaaggcccatttactgagcccataaccattttctcggtctctagtgtaggggtgggtggaagtgtaacaattg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676548 |
tcaatatcattattttcaccactagaacaaggcccatttactgagcccataaccattttctcggtctctagtgtaggggtgggtggaagtgtaacaattg |
44676647 |
T |
|
| Q |
301 |
aagcaggttcacttttttggaaaacattttgggatatatatcgtatgttcttcttcat |
358 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44676648 |
aagcaggttcacttttttggaaaacattttgggatatatatcgtatgttcttcttcat |
44676705 |
T |
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