View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14117_low_52 (Length: 359)
Name: NF14117_low_52
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_52 |
 | |
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| [»] scaffold0440 (2 HSPs) |
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| [»] chr2 (3 HSPs) |
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| [»] scaffold0044 (1 HSPs) |
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| [»] chr8 (9 HSPs) |
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| [»] chr5 (10 HSPs) |
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| [»] chr3 (4 HSPs) |
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| [»] chr6 (10 HSPs) |
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| [»] chr7 (4 HSPs) |
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| [»] chr1 (3 HSPs) |
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Alignment Details
Target: scaffold0440 (Bit Score: 337; Significance: 0; HSPs: 2)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 7054 - 7398
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
7054 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
7153 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
7154 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctata |
7253 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
7254 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
7353 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7354 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
7398 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 218 - 359
Target Start/End: Original strand, 2731 - 2872
Alignment:
| Q |
218 |
ttgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagc |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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|
| T |
2731 |
ttgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagttacattttctgagggagc |
2830 |
T |
|
| Q |
318 |
aagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
2831 |
aagtgaacaagggagcactacagattgttcattgttctactg |
2872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 333; Significance: 0; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 8054940 - 8055284
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8054940 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
8055039 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055040 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctata |
8055139 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055140 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctacatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
8055239 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055240 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
8055284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 36674599 - 36674943
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36674599 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
36674698 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36674699 |
ctgtgagtctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
36674798 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
36674799 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
36674898 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36674899 |
agcaagtgaacaagggagcacttcagattgttcattgttctactg |
36674943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 20 - 351
Target Start/End: Complemental strand, 35951042 - 35950711
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
35951042 |
caagatagaaagagtacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtggcattgtcaatctgtg |
35950943 |
T |
|
| Q |
120 |
aatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaatt |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
35950942 |
aatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctatataatt |
35950843 |
T |
|
| Q |
220 |
gctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaa |
319 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
35950842 |
gttcatagacaacaaatctgctataagcttagcaataaatccagttatgcatggaagaagcaagcatatagaagccaagtttcattttctgagggagcaa |
35950743 |
T |
|
| Q |
320 |
gtgaacaagggagcactacagattgttcattg |
351 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |
|
|
| T |
35950742 |
gtgaacaagggagcactgcagattgttcattg |
35950711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 45474 - 45130
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45474 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
45375 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
45374 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
45275 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
45274 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcacatagaagcaaagtttcattttctgaggg |
45175 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45174 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
45130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 198293 - 197949
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
198293 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
198194 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
198193 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
198094 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
198093 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcacatagaagcaaagtttcattttctgaggg |
197994 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
197993 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
197949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 313130 - 312786
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
313130 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
313031 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
313030 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
312931 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
312930 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcacatagaagcaaagtttcattttctgaggg |
312831 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312830 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
312786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 30406412 - 30406068
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30406412 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
30406313 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30406312 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctata |
30406213 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
30406212 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagttccattttctaaggg |
30406113 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30406112 |
aacaagtgaacaagggagcactgcagattgttcattgttctactg |
30406068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 43808092 - 43807748
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43808092 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
43807993 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43807992 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
43807893 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
43807892 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
43807793 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
43807792 |
agcaagtgaacaagggagcacttcagattgttcattgttctactg |
43807748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 326
Target Start/End: Original strand, 41949362 - 41949669
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41949362 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctctaattttattgtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
41949461 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41949462 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
41949561 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||||||||| || || |||| ||||||||||| ||| |||| ||||| |||||| |||||||||| |
|
|
| T |
41949562 |
tgttcatggacaacaaatctgctataagcttagcaagaaatccaattttgtatgggagaagcaagcacatataagctaagttccattttttgagggagca |
41949661 |
T |
|
| Q |
319 |
agtgaaca |
326 |
Q |
| |
|
|||||||| |
|
|
| T |
41949662 |
agtgaaca |
41949669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 359
Target Start/End: Original strand, 1290876 - 1291216
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||||| ||||| | ||||||||| ||| |
|
|
| T |
1290876 |
acaagatagaaagagcacttcagagtacctattcaaatttatgaatgcttcaatttcagggtgtgctaagaagcaacctgttgtggtattgtcaacttgt |
1290975 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| |||| |||||||||| || |
|
|
| T |
1290976 |
gaatctgagtatattgcagggtgtatggcagcatgtcagacagtatgacttgaaaatatactcaaggagatggagatagaagttaacagacctataatat |
1291075 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1291076 |
tgttcatagacaacaaatctactataagcttggcaagaaatccagttctgcttgggagaagcaagcatatagaagccaagtttcattttctgagggagca |
1291175 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
1291176 |
agtgaacaagggagcactgcagattgttcattgctctactg |
1291216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 23 - 351
Target Start/End: Complemental strand, 31473756 - 31473428
Alignment:
| Q |
23 |
gatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtgaat |
122 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
31473756 |
gatagaaaaagcacttcaggttacctattcaagtttctaaatgccccaatttcatggtgtgttaagaagcaaccagttgtggcattgtcaacctgtgaat |
31473657 |
T |
|
| Q |
123 |
ctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaattgct |
222 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| | ||||| ||||||||||||||||||||| ||||||||| |||||||||||||| | |||| | |
|
|
| T |
31473656 |
ctgagtatattgcaggatgtatggcagcatgccaggcagtatggcttgaaaatatactcaaggagacggagatagaagttagcagacctattgcattgtt |
31473557 |
T |
|
| Q |
223 |
catagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtg |
322 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
31473556 |
catagataacaaatcttctataagcttagcaagaaatccaattcttcatggaagaagcaagcatatagaagctaagttccattttctgagggagcaagtg |
31473457 |
T |
|
| Q |
323 |
aacaagggagcactacagattgttcattg |
351 |
Q |
| |
|
|||||||||| ||| |||||||| ||||| |
|
|
| T |
31473456 |
aacaagggagaactgcagattgtccattg |
31473428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 23 - 353
Target Start/End: Complemental strand, 27435782 - 27435452
Alignment:
| Q |
23 |
gatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtgaat |
122 |
Q |
| |
|
|||||||| || || ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |
|
|
| T |
27435782 |
gatagaaaaagtacctcaggttacctattcaagtttctgaatgccccaatttcatggtgtgctaagaagcaactagttgtggcattgtcaacctttgaat |
27435683 |
T |
|
| Q |
123 |
ctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaattgct |
222 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| | ||||| || |||| ||||||||||||||||||||||| || |||||||| ||| |||| | |
|
|
| T |
27435682 |
ctgagtatattgcagggtgtatgacagcatgtcaggcagtatggctttaaaacatactcaaggagatggagatagaagtgagcagaccaataacattgtt |
27435583 |
T |
|
| Q |
223 |
catagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtg |
322 |
Q |
| |
|
|| ||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
27435582 |
caaagataacagatctgctataagcttagcaagaaatccagttttgcttggaagaagcaaacacatagaggctaagttccattttctgagggagcaagtg |
27435483 |
T |
|
| Q |
323 |
aacaagggagcactacagattgttcattgtt |
353 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |
|
|
| T |
27435482 |
aacaagggagcattgcagattgttcattgtt |
27435452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 17782759 - 17782650
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
||||||||||| || || ||||| ||||||||||||||| ||||||||| ||| || | ||||||||||||||||||||| || |||||||||| |||| |
|
|
| T |
17782759 |
caagatagaaaaaggacctcaggctacctattcaagtttctgaatgctctaatctcttagtgtgctaagaagcaaccagtgttaccattgtcaacatgtg |
17782660 |
T |
|
| Q |
120 |
aatctgagta |
129 |
Q |
| |
|
|||||||||| |
|
|
| T |
17782659 |
aatctgagta |
17782650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 329; Significance: 0; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 12022837 - 12023181
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12022837 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
12022936 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12022937 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatacttaaggagatggagatagaggttagcagacctata |
12023036 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12023037 |
gaattactcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
12023136 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12023137 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
12023181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 7099983 - 7099639
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7099983 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
7099884 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7099883 |
ctgtgagtctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
7099784 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
7099783 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
7099684 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7099683 |
agcaagtgaacaagggagcacttcagattgttcattgttctactg |
7099639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 16798217 - 16798561
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16798217 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
16798316 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16798317 |
ctgtgagtctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
16798416 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
16798417 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
16798516 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16798517 |
agcaagtgaacaagggagcacttcagattgttcattgttctactg |
16798561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 37681584 - 37681928
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37681584 |
acagacaagatagaaagagcacttcagggtacctattcaaatttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
37681683 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37681684 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagtagacctata |
37681783 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37681784 |
gaattactcatagacaacaaatttgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
37681883 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37681884 |
agcaaatgaacaagggagcactacagattgttcattgttctactg |
37681928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 19 - 359
Target Start/End: Original strand, 10276756 - 10277096
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
10276756 |
acaagatagaaagatcacttcatggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtggcattgtcaacttgt |
10276855 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
10276856 |
gaatctgagtatattgcagggtgtatggcagcatgtcaaacaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctatataat |
10276955 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10276956 |
tgttcatatacaacaaatctgctataagcttagtaagaaatccaattctgcatggaagaagcaagcatatagaagccaagtttcattttctgagggagca |
10277055 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
10277056 |
agtgaacaagggagcactgcagattgttcattgctctactg |
10277096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 112 - 358
Target Start/End: Complemental strand, 40368112 - 40367866
Alignment:
| Q |
112 |
aacctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacct |
211 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40368112 |
aacctgtgaatatgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacct |
40368013 |
T |
|
| Q |
212 |
atagaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctga |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
40368012 |
atagaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagtttcattttctaa |
40367913 |
T |
|
| Q |
312 |
gggagcaagtgaacaagggagcactacagattgttcattgttctact |
358 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
40367912 |
gggagcaagtgaacaagggagcactgcagattgttcattgctctact |
40367866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 354
Target Start/End: Complemental strand, 26454861 - 26454527
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgc--tccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctg |
117 |
Q |
| |
|
|||||||| |||||||| |||| ||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
26454861 |
caagataggaagagcacctcagattacctattcaagtttctaaatgcgatcca--ttcatggtgtgctaagaagcaaccagttgtagcactgtcaacttg |
26454764 |
T |
|
| Q |
118 |
tgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaa |
217 |
Q |
| |
|
|||||||||||| |||||||| |||||| |||| ||||| | | | | | ||||||||||||||||| | ||||| ||||| |||| || || |||| | |
|
|
| T |
26454763 |
tgaatctgagtacattgcaggatgtatgacagcttgtcaagcagtttagcttgaaaatatactcaagaatatggaaatagaagttaacatacttatatca |
26454664 |
T |
|
| Q |
218 |
ttgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagc |
317 |
Q |
| |
|
||| ||||||| |||||||| |||| | |||||||| |||||| || ||||||||| || || || || |||| |||||||| ||||||||||| | |
|
|
| T |
26454663 |
ttgttcatagataacaaatcatctattaacttagcaaataatccaattttgcatggaatgagtaaacacattgaagttaagtttcactttctgagggaac |
26454564 |
T |
|
| Q |
318 |
aagtgaacaagggagcactacagattgttcattgttc |
354 |
Q |
| |
|
|||| ||||||| ||| | || |||||||||||||| |
|
|
| T |
26454563 |
aagttaacaaggaggcattgcaaattgttcattgttc |
26454527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 307
Target Start/End: Original strand, 25632280 - 25632567
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
||||||||||||| ||| | | | ||||| ||||| ||| | ||||||| || || ||||| ||||||||| ||||| | | ||| |||||||| |||| |
|
|
| T |
25632280 |
caagatagaaagaacaccttatgctacctgttcaaatttctaaatgctctgatctcttggtgagctaagaagaaaccaatggcagccttgtcaacatgtg |
25632379 |
T |
|
| Q |
120 |
aatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaatt |
219 |
Q |
| |
|
|||||||||| |||||||| || ||||||| ||||| | | | ||| ||||| |||||| ||||||||| | || || || | ||||||||| | |
|
|
| T |
25632380 |
aatctgagtacattgcaggttgattggcagcctgtcaagcagtttggcttgaatctatactaaaggagatgaaaattgaagtaaatagacctataactct |
25632479 |
T |
|
| Q |
220 |
gctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcatttt |
307 |
Q |
| |
|
| | || ||||||||||| ||||||| ||| || | |||||||||||||| |||||| |||| ||| | ||||| || ||||||||| |
|
|
| T |
25632480 |
gtttatggacaacaaatcagctataaacttggctaaaaatccagttctgcttggaaggagcacgcacactgaagccaactttcatttt |
25632567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 327
Target Start/End: Original strand, 30066992 - 30067094
Alignment:
| Q |
225 |
tagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtgaa |
324 |
Q |
| |
|
||||||| ||||||| |||| |||||| | ||||| || |||||||||||||||||||||| |||||||||||||||||||| || || |||||||| |
|
|
| T |
30066992 |
tagacaatcaatctgccataaacttagccaaaaatcatgtgttgcatggaagaagcaagcatattgaagcaaagtttcattttctcagagaacaagtgaa |
30067091 |
T |
|
| Q |
325 |
caa |
327 |
Q |
| |
|
||| |
|
|
| T |
30067092 |
caa |
30067094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 30066787 - 30066923
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
|||||||| || ||||||||| | ||| | ||||| ||| |||||||||| || ||||||||| | || ||||||| || ||| | | ||||| |||| |
|
|
| T |
30066787 |
caagataggaaaagcacttcatgctacttgttcaaatttctgaatgctcctatatcatggtgtacaaaaaagcaacttgtattagtactttcaacttgtg |
30066886 |
T |
|
| Q |
120 |
aatctgagtatattgcagggtgtatggcagcatgtca |
156 |
Q |
| |
|
|||||||||| |||| ||||||| | ||||||||||| |
|
|
| T |
30066887 |
aatctgagtacattgtagggtgtttagcagcatgtca |
30066923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 329; Significance: 0; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 54167953 - 54167609
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54167953 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
54167854 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
54167853 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatacttaaggagatggagatagaggttagcagacctata |
54167754 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
54167753 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcacatagaagcaaagtttcattttctgaggg |
54167654 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54167653 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
54167609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 21849747 - 21850091
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21849747 |
acagacaagatagaaagagtacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
21849846 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21849847 |
ctgtgaatctgaatatattgcagggtgtatggcagcatgttaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
21849946 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21849947 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctaaggg |
21850046 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
21850047 |
agcaagtgaacaagggagcactgcagattgttcattgctctactg |
21850091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 23 - 356
Target Start/End: Original strand, 43553848 - 43554181
Alignment:
| Q |
23 |
gatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtgaat |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43553848 |
gatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcacggtgtgctaagaagcaaccagttgtagcattgtcaacctgtgaat |
43553947 |
T |
|
| Q |
123 |
ctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaattgct |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| | |||| | |
|
|
| T |
43553948 |
ctgagtatattgcagggtgtatggcagcatgtcaagcaatatggcttgaaaatatactcaaatagatggagatataggttagcagacctatggcattgtt |
43554047 |
T |
|
| Q |
223 |
catagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtg |
322 |
Q |
| |
|
|||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
43554048 |
catagacaacaaatatggtataatcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagtttcattttctgagggagctagtg |
43554147 |
T |
|
| Q |
323 |
aacaagggagcactacagattgttcattgttcta |
356 |
Q |
| |
|
||||||| |||| | ||||||||||||| |||| |
|
|
| T |
43554148 |
aacaaggaagcattgtagattgttcattgctcta |
43554181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 23 - 351
Target Start/End: Complemental strand, 53353583 - 53353255
Alignment:
| Q |
23 |
gatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtgaat |
122 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
53353583 |
gatagaaagagcacttcagggtacctatttaagttcttaaatgctccaatttcatggtgtgctaagaaacaaccagttgtagcattgtcaacctgtgaat |
53353484 |
T |
|
| Q |
123 |
ctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaattgct |
222 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||| | |||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||| | |
|
|
| T |
53353483 |
ctgagtatattgcaggatgtatgacagcatgtcaggcagtatgacttgaaaatatacttaaggaaatggagatagaggttagcagacctatagcattgtt |
53353384 |
T |
|
| Q |
223 |
catagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtg |
322 |
Q |
| |
|
||| |||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| | || || || |||||||| |||||||||||| |
|
|
| T |
53353383 |
catcgacaacaaatatgctataagcttagcaataaatccagttctgcatgggagaagcaagcatataaaggctaaattccattttctaagggagcaagtg |
53353284 |
T |
|
| Q |
323 |
aacaagggagcactacagattgttcattg |
351 |
Q |
| |
|
||||| || ||| | |||||||| ||||| |
|
|
| T |
53353283 |
aacaaaggtgcattgcagattgtccattg |
53353255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 324; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 15 - 358
Target Start/End: Original strand, 44151106 - 44151449
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44151106 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
44151205 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44151206 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctata |
44151305 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
44151306 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
44151405 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctact |
358 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44151406 |
agcaagtgaacaagggagcacttcagattgttcattgttctact |
44151449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 19 - 359
Target Start/End: Complemental strand, 50628535 - 50628195
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
50628535 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtggcattgtcaacctgt |
50628436 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
50628435 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaagttagcagacctatagaat |
50628336 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
50628335 |
tgttcatagacaacaaatctgctataagcttagcaagaaattcagttccgcatggaagaagcaagcatatagaagccaagtttcattttctgagggagca |
50628236 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
50628235 |
agtgaacaagggagcactgtagattgttcattgctctactg |
50628195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 19 - 359
Target Start/End: Complemental strand, 8893226 - 8892886
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8893226 |
acaagatagaaagagcacttcaggatacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcacccagttgtagcattgtcaacctgt |
8893127 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8893126 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatagcttgaaaatatactcaaagagatggagatagaggttagcagacctatagaat |
8893027 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
8893026 |
taatcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaaacatatagaagctgagttccattttctgagggagca |
8892927 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8892926 |
agtgaacaagggagcactacagattgttcattgctctactg |
8892886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 359
Target Start/End: Original strand, 31358704 - 31359044
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31358704 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
31358803 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| || |
|
|
| T |
31358804 |
gaatctaagtatattgcaggatgtatggcagtatgtcaggcagtatggcttgaaaatatactcaatgagatggagatagaggttagcagacctatagcat |
31358903 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||| |||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31358904 |
tgttcatagacaacaaatctgttataagcttagaaagaaatctagttatgcatgggagaagcaagcatatagaagtcaagtttcattttctgagggagca |
31359003 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
31359004 |
agtgaacaagggagcactgtagattgttcattgctctactg |
31359044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 321; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 8316113 - 8315769
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8316113 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
8316014 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8316013 |
ctgtgagtctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
8315914 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8315913 |
gaattgctcatagacaacaaatctgctataagtttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
8315814 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8315813 |
agcaagtgaacaagggagcactacagattgttcattgatctactg |
8315769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 359
Target Start/End: Complemental strand, 17887450 - 17887110
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17887450 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgatccaatttcaccgtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
17887351 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17887350 |
gaatctgagtatattgcagggtgtatggaagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
17887251 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| || ||| ||||||| || || ||||||||||||||||| |
|
|
| T |
17887250 |
tgttcatagacaacaaatcagctataagcttagcaagaaatctagttctgcatggaagaagtaaacatgtagaagctaacttccattttctgagggagca |
17887151 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
17887150 |
agtaaacaagggagcactgcagattgttcattgctctactg |
17887110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 283
Target Start/End: Complemental strand, 27568788 - 27568524
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
27568788 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccaattgtagcattgtcaacctgt |
27568689 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27568688 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
27568589 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaag |
283 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27568588 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaag |
27568524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 27552453 - 27552375
Alignment:
| Q |
281 |
aagcatatagaagcaaagtttcattttctgagggagcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
27552453 |
aagcatatagaagccaagtttcattttctaagggagcaagtaaacaagggagcactgcagattgttcattgctctactg |
27552375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 23256029 - 23256140
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
||||||| ||||||||| | ||| |||||||| || ||| ||||||||||||| || ||||||||||||||||||| ||| |||||||||| ||| ||| |
|
|
| T |
23256029 |
caagatataaagagcaccttaggttacctatttaaatttctgaatgctccaatctcttggtgtgctaagaagcaactagtggtagcattgtgaacatgta |
23256128 |
T |
|
| Q |
120 |
aatctgagtata |
131 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23256129 |
aatctgagtata |
23256140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 359
Target Start/End: Original strand, 3596333 - 3596464
Alignment:
| Q |
228 |
acaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtgaacaa |
327 |
Q |
| |
|
|||||||||| ||||||| ||||| || ||||||||| |||||||||| || ||||| || ||||| |||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
3596333 |
acaacaaatcggctataaacttagtaaagaatccagttttgcatggaaggaggaagcacattgaagctaagtttcactttcttagggaacaagtaaacaa |
3596432 |
T |
|
| Q |
328 |
gggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
| |||| | ||||||| ||||||||||||| |
|
|
| T |
3596433 |
gcaagcattgaagattgtccattgttctactg |
3596464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 3596272 - 3596327
Alignment:
| Q |
22 |
agatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcat |
77 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
3596272 |
agataggaagagcacatcaggttacctattcaagtttctgaatgctccaatttcat |
3596327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 17163431 - 17163509
Alignment:
| Q |
273 |
gaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtgaacaagggagcactacagattgttcattg |
351 |
Q |
| |
|
|||||||||| || |||| |||||||| ||||||||||||||| |||||||||| || ||| | |||||||| ||||| |
|
|
| T |
17163431 |
gaagaagcaaacacgtagaggcaaagttccattttctgagggagaaagtgaacaaaggtgcattgcagattgtccattg |
17163509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 15565541 - 15565405
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
|||||||| || ||||||||| | || | ||||| ||||||||||||| || ||||||||| | |||||| |||| | | ||| | ||||| |||| |
|
|
| T |
15565541 |
caagataggaaaagcacttcatgctaattgttcaaatttatgaatgctcttatatcatggtgtacaaagaagaaacctataatggcactttcaacttgtg |
15565442 |
T |
|
| Q |
120 |
aatctgagtatattgcagggtgtatggcagcatgtca |
156 |
Q |
| |
|
|||||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
15565441 |
aatctgagtacattgcagagtgtttagcagcatgtca |
15565405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 8855630 - 8855590
Alignment:
| Q |
116 |
tgtgaatctgagtatattgcagggtgtatggcagcatgtca |
156 |
Q |
| |
|
|||||||||||||||||||| |||||| | ||||||||||| |
|
|
| T |
8855630 |
tgtgaatctgagtatattgccgggtgtttagcagcatgtca |
8855590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 15 - 359
Target Start/End: Complemental strand, 7940692 - 7940348
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7940692 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
7940593 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7940592 |
ctgtgagtctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
7940493 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
7940492 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
7940393 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7940392 |
agcaagtgaacaagggagcacttcagattgttcattgttctactg |
7940348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 19 - 359
Target Start/End: Original strand, 27760949 - 27761289
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27760949 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
27761048 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27761049 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
27761148 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
27761149 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaaacaaagtttcattttctaagggagca |
27761248 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
27761249 |
agtgaacaagggagcactgcagattgttcattgctctactg |
27761289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 38 - 327
Target Start/End: Complemental strand, 13828690 - 13828401
Alignment:
| Q |
38 |
tcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtgaatctgagtatattgcag |
137 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
13828690 |
tcaggttacctattcaagttcctgaatgccccaatttcatggtgtgctaagaagaaaccagttgtggcattgtcaacctgtgagtctgagtatattgcag |
13828591 |
T |
|
| Q |
138 |
ggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaattgctcatagacaacaaatc |
237 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||| | |||||| | |||| ||||||| |||||||| |
|
|
| T |
13828590 |
ggtgtatggcagcatgtcagacaatatggcttgaaaatatactcaagaagatggagatagaagttagtatacctattgcattgttcatagataacaaatc |
13828491 |
T |
|
| Q |
238 |
tgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaagtgaacaa |
327 |
Q |
| |
|
| | |||||||||||||||||||||||| |||||||||||||||| || ||||| || |||||||||||| ||||||||||||| ||||| |
|
|
| T |
13828490 |
tacaataagcttagcaagaaatccagttttgcatggaagaagcaaacacatagaggctaagtttcattttttgagggagcaagtaaacaa |
13828401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 348
Target Start/End: Original strand, 22580480 - 22580808
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
|||||||||||||| || | ||| ||| ||||||| ||| | ||||||||||| || ||||||||| ||||||||| ||| |||| ||| |||||||||| |
|
|
| T |
22580480 |
caagatagaaagagtaccttaggctacatattcaaatttctaaatgctccaatctcttggtgtgcttagaagcaacaagtggtagtattttcaacctgtg |
22580579 |
T |
|
| Q |
120 |
aatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaatt |
219 |
Q |
| |
|
|||||||||| |||||| | || | ||||| ||||| | | | ||| ||||| |||||| |||||||||| || ||||||| || |||||||| || |
|
|
| T |
22580580 |
aatctgagtacattgcatgttgcctagcagcttgtcaagcagtttggcttgaagttatacttgaggagatggaaattgaggttaacaaacctataggttt |
22580679 |
T |
|
| Q |
220 |
gctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagcaa |
319 |
Q |
| |
|
| | |||||||||||||| |||||| |||||| | |||||||||| | |||||||| |||||||| || || || || || |||||||| | || ||| |
|
|
| T |
22580680 |
gtttatagacaacaaatcaactataaacttagctaaaaatccagttttacatggaaggagcaagcacattgaggccaaattccattttcttatagaacaa |
22580779 |
T |
|
| Q |
320 |
gtgaacaagggagcactacagattgttca |
348 |
Q |
| |
|
|| ||||||| |||| | |||||||||| |
|
|
| T |
22580780 |
gtaaacaaggaagcattgaagattgttca |
22580808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 317; Significance: 1e-179; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 15 - 359
Target Start/End: Original strand, 26315561 - 26315905
Alignment:
| Q |
15 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26315561 |
acagacaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaac |
26315660 |
T |
|
| Q |
115 |
ctgtgaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctata |
214 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26315661 |
ctgtgagtctgagtatattgcagggtgtatggcagcatgtcaggcaatatggcttgaaaatatactcaaagagatggagatagaggttagcagacctata |
26315760 |
T |
|
| Q |
215 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgaggg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26315761 |
gaattgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagccaagttccattttctgaggg |
26315860 |
T |
|
| Q |
315 |
agcaagtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26315861 |
agcaagtgaacaagggagcacttcagattgttcattgttctactg |
26315905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 359
Target Start/End: Complemental strand, 43592426 - 43592086
Alignment:
| Q |
19 |
acaagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgt |
118 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
43592426 |
acaagatagaaagagcacttcatggtacctattcaaatttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtggcattgttaacctgt |
43592327 |
T |
|
| Q |
119 |
gaatctgagtatattgcagggtgtatggcagcatgtcaggaaatatggattgaaaatatactcaaggagatggagatagaggttagcagacctatagaat |
218 |
Q |
| |
|
|||| |||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
43592326 |
gaatttgagtatattacagggtgtatggcaacatgtcaggcaatatggcttgaaaatatactcaaggagatggagatagaggttagcagacctatataat |
43592227 |
T |
|
| Q |
219 |
tgctcatagacaacaaatctgctataagcttagcaagaaatccagttctgcatggaagaagcaagcatatagaagcaaagtttcattttctgagggagca |
318 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| ||||| |||||| ||||||| || |
|
|
| T |
43592226 |
tgttcatagacaacaaatctgctataagcttagcaagaaattcagttctgcatgggagaagcaagcatataaaagctaagttccattttatgagggacca |
43592127 |
T |
|
| Q |
319 |
agtgaacaagggagcactacagattgttcattgttctactg |
359 |
Q |
| |
|
||||||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
43592126 |
agtgaacaagggagctctgtagattgttcattgctctactg |
43592086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 30646918 - 30647039
Alignment:
| Q |
20 |
caagatagaaagagcacttcagggtacctattcaagtttatgaatgctccaatttcatggtgtgctaagaagcaaccagttgtagcattgtcaacctgtg |
119 |
Q |
| |
|
|||||||||||||| |||| ||| ||| | || || ||| | ||||||| ||| ||||||||||||||||||||||| || ||||| || ||||| |||| |
|
|
| T |
30646918 |
caagatagaaagagtacttgaggctacttgtttaaatttctaaatgctcaaatatcatggtgtgctaagaagcaaccggtggtagccttatcaacttgtg |
30647017 |
T |
|
| Q |
120 |
aatctgagtatattgcagggtg |
141 |
Q |
| |
|
| | ||||| ||||||| |||| |
|
|
| T |
30647018 |
agtttgagtgtattgcatggtg |
30647039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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