View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_low_62 (Length: 325)
Name: NF14117_low_62
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_62 |
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Alignment Details
Target: chr6 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 30771908 - 30772206
Alignment:
| Q |
19 |
ttggtatgcctcaatttcatcatcaaccacaacatcctattaatgtagctcctcctagtggtactaattatggttatgaatatagtggtaatgtggaagg |
118 |
Q |
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| T |
30771908 |
ttggtatgcctcaatttcatcatcaaccacaacatcctattaatgtagctcctcctagtggtactaattatggttatgaatatagtggtaatgtggaagg |
30772007 |
T |
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| Q |
119 |
tcaagtgtactatactcaacagcaaaatagtgctcctttggttactcaataccaatccatgactcctgcagctgctgctgcagcattatcagatgcttcc |
218 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30772008 |
tcaagtgtactatactcaacagcaaaataatgctcctttggttactcaataccaatccatgactcctgcagctgctgctgcagcattatcagatgcttcc |
30772107 |
T |
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| Q |
219 |
caacaatttcctggagaaaatgttcagcagtcaaatagaacttcgcagccggtataaatcggatccagattccctgcagtcggaatttccaagtataat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
30772108 |
caacaatttcctggagaaaatgttcagcagtcaaatagaacttcgcagccagtataaatcggatccagattccctgcagtcggaatttccaggtataat |
30772206 |
T |
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