View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14117_low_72 (Length: 278)
Name: NF14117_low_72
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_72 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 30881541 - 30881805
Alignment:
| Q |
1 |
agcacagaaagttagagcaatacgcattgaac--acnnnnnnnggaagctagacatcaccgggaaagaacttcgatgacaattggggttgctagaaggat |
98 |
Q |
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| T |
30881541 |
agcacacaaagttagagcaatacgcattgaacgcacaaaaaaaggaagctagacatcaccggaaaagaacttcgatgacaattggggttgctagaaagat |
30881640 |
T |
|
| Q |
99 |
ttagtttagagcatcgatccccaatctctgctgtaattgtagctaaatattgttgagcttatttccagtgtcatggtgataaatgcatgtataatcaatg |
198 |
Q |
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| T |
30881641 |
ttagtttagagcatcgatccccaatctctgctgtaattgtagctaaataatgttgagcttatttccagtgtcgtggtgataaatgcatgtacaatcaatg |
30881740 |
T |
|
| Q |
199 |
tttcgtcaattttttaatttgatcccaaaacaagttttgtggttgttaagaacgacgttatattt |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30881741 |
tttcgtcaattttttaatttgatcccaaaacaagttttgtggttgttaagaacgacgttatattt |
30881805 |
T |
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