View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14117_low_73 (Length: 271)

Name: NF14117_low_73
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14117_low_73
NF14117_low_73
[»] chr8 (41 HSPs)
chr8 (1-261)||(22244617-22244883)
chr8 (1-261)||(23947414-23947679)
chr8 (1-261)||(17907540-17907807)
chr8 (1-240)||(22318527-22318772)
chr8 (59-258)||(23888942-23889141)
chr8 (62-261)||(22584372-22584572)
chr8 (1-261)||(17217802-17218068)
chr8 (22-242)||(31723202-31723428)
chr8 (4-261)||(19699280-19699544)
chr8 (1-242)||(45471030-45471277)
chr8 (6-255)||(20024860-20025113)
chr8 (1-137)||(9499-9640)
chr8 (1-162)||(36727726-36727894)
chr8 (160-261)||(39695267-39695367)
chr8 (160-261)||(42266331-42266432)
chr8 (121-261)||(22259063-22259203)
chr8 (153-254)||(20455218-20455318)
chr8 (153-254)||(20460196-20460296)
chr8 (153-261)||(20454454-20454561)
chr8 (78-254)||(19882187-19882365)
chr8 (82-224)||(36727984-36728126)
chr8 (160-237)||(25849185-25849262)
chr8 (153-232)||(15635910-15635989)
chr8 (82-242)||(31723458-31723618)
chr8 (160-215)||(18302707-18302762)
chr8 (143-232)||(19140013-19140102)
chr8 (1-56)||(23900675-23900730)
chr8 (157-261)||(20179251-20179355)
chr8 (20-56)||(22252992-22253028)
chr8 (1-56)||(25849018-25849072)
chr8 (203-261)||(20084409-20084467)
chr8 (160-258)||(23418545-23418642)
chr8 (143-232)||(39936725-39936814)
chr8 (1-56)||(23418753-23418808)
chr8 (63-133)||(3273282-3273351)
chr8 (143-212)||(5760842-5760910)
chr8 (19-52)||(20501927-20501960)
chr8 (19-48)||(22381560-22381589)
chr8 (78-141)||(8414365-8414429)
chr8 (78-141)||(11775055-11775119)
chr8 (13-49)||(21985098-21985134)
[»] chr6 (38 HSPs)
chr6 (27-261)||(31735521-31735761)
chr6 (61-261)||(22212144-22212346)
chr6 (65-261)||(13750995-13751191)
chr6 (101-240)||(19443959-19444099)
chr6 (1-212)||(23500890-23501107)
chr6 (153-261)||(610955-611062)
chr6 (101-232)||(16133349-16133481)
chr6 (153-261)||(29848235-29848342)
chr6 (153-256)||(18658426-18658528)
chr6 (1-162)||(6083360-6083528)
chr6 (94-261)||(24441140-24441304)
chr6 (160-242)||(19829691-19829773)
chr6 (63-259)||(24266982-24267178)
chr6 (143-261)||(15891418-15891537)
chr6 (1-139)||(22376485-22376630)
chr6 (157-261)||(17318852-17318956)
chr6 (153-261)||(13764565-13764672)
chr6 (1-56)||(24550853-24550908)
chr6 (61-139)||(18259824-18259902)
chr6 (82-242)||(23491974-23492134)
chr6 (82-242)||(23497572-23497732)
chr6 (115-259)||(5110466-5110598)
chr6 (160-261)||(24551020-24551117)
chr6 (157-259)||(27126207-27126309)
chr6 (115-259)||(5289825-5289957)
chr6 (143-261)||(31733926-31734045)
chr6 (19-115)||(20078000-20078102)
chr6 (143-221)||(23150981-23151059)
chr6 (13-48)||(16245612-16245647)
chr6 (13-56)||(25738637-25738680)
chr6 (3-49)||(15896200-15896246)
chr6 (63-139)||(16245514-16245592)
chr6 (143-232)||(18708748-18708836)
chr6 (132-212)||(19655892-19655972)
chr6 (143-212)||(23491846-23491914)
chr6 (143-212)||(23497444-23497512)
chr6 (143-218)||(7827234-7827309)
chr6 (78-141)||(23956195-23956259)
[»] scaffold0409 (2 HSPs)
scaffold0409 (4-258)||(444-704)
scaffold0409 (4-258)||(8699-8959)
[»] chr2 (29 HSPs)
chr2 (1-261)||(44071706-44071971)
chr2 (1-242)||(3538972-3539220)
chr2 (22-261)||(27851793-27852037)
chr2 (22-261)||(27860499-27860743)
chr2 (1-217)||(18390901-18391124)
chr2 (2-255)||(25141307-25141565)
chr2 (61-258)||(19358152-19358348)
chr2 (82-261)||(10897445-10897625)
chr2 (4-248)||(14693438-14693688)
chr2 (4-242)||(22259205-22259449)
chr2 (27-157)||(10897137-10897273)
chr2 (82-242)||(25141129-25141289)
chr2 (117-259)||(5985299-5985443)
chr2 (160-243)||(18389036-18389119)
chr2 (1-237)||(25045241-25045484)
chr2 (152-240)||(6478029-6478117)
chr2 (143-261)||(9975146-9975265)
chr2 (143-261)||(17306705-17306824)
chr2 (153-221)||(31520371-31520439)
chr2 (143-261)||(36839392-36839511)
chr2 (143-261)||(28653217-28653336)
chr2 (149-261)||(24515404-24515517)
chr2 (143-232)||(27485185-27485274)
chr2 (143-222)||(23969338-23969417)
chr2 (143-220)||(5031845-5031922)
chr2 (143-232)||(24781555-24781644)
chr2 (153-224)||(21368050-21368121)
chr2 (19-52)||(34137202-34137235)
chr2 (3-56)||(6576598-6576653)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-241)||(136189-136435)
scaffold0008 (153-261)||(12240-12347)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-261)||(66226-66491)
[»] chr7 (58 HSPs)
chr7 (61-261)||(11053845-11054045)
chr7 (1-255)||(15139343-15139603)
chr7 (1-242)||(14219585-14219832)
chr7 (1-255)||(19557897-19558156)
chr7 (1-242)||(15096257-15096504)
chr7 (1-261)||(15281477-15281742)
chr7 (115-259)||(3289513-3289657)
chr7 (1-242)||(13132939-13133186)
chr7 (1-210)||(16077586-16077801)
chr7 (1-224)||(48809102-48809330)
chr7 (5-256)||(4070945-4071201)
chr7 (63-258)||(37785001-37785196)
chr7 (153-261)||(4325271-4325378)
chr7 (153-261)||(8757126-8757233)
chr7 (153-261)||(40555473-40555580)
chr7 (152-258)||(17130473-17130578)
chr7 (160-261)||(36705407-36705507)
chr7 (160-243)||(17071026-17071109)
chr7 (121-261)||(18875617-18875759)
chr7 (121-261)||(43277517-43277659)
chr7 (153-259)||(832753-832858)
chr7 (153-259)||(1197933-1198038)
chr7 (153-240)||(12755436-12755523)
chr7 (78-254)||(14191741-14191919)
chr7 (1-56)||(36705240-36705295)
chr7 (82-255)||(13133216-13133388)
chr7 (61-243)||(21735137-21735322)
chr7 (143-261)||(33001175-33001291)
chr7 (121-232)||(3287164-3287276)
chr7 (160-232)||(59157-59229)
chr7 (143-261)||(46386802-46386921)
chr7 (78-254)||(14188947-14189125)
chr7 (143-261)||(20585574-20585693)
chr7 (165-261)||(47094293-47094387)
chr7 (59-138)||(8135757-8135836)
chr7 (153-240)||(13408007-13408094)
chr7 (143-232)||(12127879-12127968)
chr7 (160-218)||(13699627-13699685)
chr7 (143-261)||(12465975-12466094)
chr7 (153-237)||(13865116-13865200)
chr7 (185-243)||(10660023-10660081)
chr7 (143-232)||(11066716-11066805)
chr7 (143-232)||(13148187-13148276)
chr7 (3-115)||(11525374-11525491)
chr7 (157-261)||(44374164-44374268)
chr7 (157-261)||(44383029-44383133)
chr7 (173-221)||(11309537-11309585)
chr7 (143-222)||(32434305-32434384)
chr7 (19-52)||(16996483-16996516)
chr7 (143-261)||(19282310-19282429)
chr7 (13-56)||(13892849-13892892)
chr7 (149-255)||(1489952-1490056)
chr7 (19-52)||(130641-130674)
chr7 (3-48)||(42462215-42462260)
chr7 (28-56)||(10659564-10659592)
chr7 (164-232)||(12371526-12371593)
chr7 (1-49)||(22000837-22000885)
chr7 (78-141)||(32160857-32160921)
[»] chr4 (48 HSPs)
chr4 (1-258)||(21061743-21062007)
chr4 (61-261)||(4615703-4615903)
chr4 (115-259)||(2584902-2585046)
chr4 (115-259)||(6511791-6511935)
chr4 (63-261)||(27027950-27028148)
chr4 (66-259)||(13446669-13446862)
chr4 (153-261)||(15448141-15448248)
chr4 (63-261)||(14933080-14933278)
chr4 (160-261)||(9871305-9871405)
chr4 (63-258)||(20899399-20899594)
chr4 (63-261)||(14942285-14942484)
chr4 (160-255)||(9638226-9638320)
chr4 (121-261)||(37018816-37018958)
chr4 (82-242)||(14629915-14630075)
chr4 (160-261)||(51992736-51992836)
chr4 (61-253)||(18229880-18230074)
chr4 (121-261)||(19435469-19435611)
chr4 (84-261)||(16026749-16026924)
chr4 (157-261)||(16997745-16997849)
chr4 (143-222)||(25090911-25090990)
chr4 (160-232)||(32467046-32467118)
chr4 (1-56)||(32466880-32466935)
chr4 (143-259)||(42875019-42875136)
chr4 (1-139)||(50160331-50160475)
chr4 (161-261)||(20774-20874)
chr4 (143-259)||(3485134-3485248)
chr4 (81-212)||(9638080-9638211)
chr4 (1-88)||(51992911-51993002)
chr4 (152-223)||(15612227-15612298)
chr4 (184-259)||(49547986-49548060)
chr4 (165-255)||(10704719-10704808)
chr4 (165-255)||(10918489-10918578)
chr4 (143-259)||(14548846-14548963)
chr4 (143-261)||(11425172-11425292)
chr4 (157-232)||(19609572-19609646)
chr4 (143-261)||(33243971-33244089)
chr4 (205-259)||(19734514-19734568)
chr4 (3-49)||(19738511-19738557)
chr4 (3-48)||(26050285-26050330)
chr4 (3-56)||(40907329-40907382)
chr4 (143-261)||(10357151-10357270)
chr4 (13-49)||(15365334-15365370)
chr4 (6-56)||(46643090-46643141)
chr4 (3-48)||(27996177-27996222)
chr4 (19-56)||(32306821-32306858)
chr4 (143-212)||(53631148-53631216)
chr4 (28-60)||(15612399-15612431)
chr4 (78-141)||(28385576-28385640)
[»] scaffold1695 (1 HSPs)
scaffold1695 (6-255)||(583-837)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-242)||(127366-127614)
scaffold0002 (4-229)||(397740-397973)
[»] chr3 (64 HSPs)
chr3 (1-242)||(13179374-13179622)
chr3 (61-261)||(20417293-20417493)
chr3 (61-261)||(45531256-45531455)
chr3 (115-261)||(23395751-23395897)
chr3 (61-261)||(14818239-14818439)
chr3 (22-212)||(11562882-11563078)
chr3 (153-261)||(13523141-13523248)
chr3 (154-261)||(3394733-3394839)
chr3 (115-240)||(17548242-17548368)
chr3 (63-240)||(52338604-52338782)
chr3 (129-261)||(10550483-10550615)
chr3 (153-261)||(13520511-13520618)
chr3 (160-243)||(6158627-6158710)
chr3 (160-243)||(14642289-14642372)
chr3 (82-242)||(11192170-11192330)
chr3 (10-239)||(17258806-17259041)
chr3 (160-261)||(42324960-42325060)
chr3 (27-183)||(16044661-16044824)
chr3 (27-183)||(16059521-16059684)
chr3 (153-261)||(18367488-18367595)
chr3 (143-261)||(41173086-41173205)
chr3 (160-243)||(37038048-37038131)
chr3 (160-261)||(10562921-10563023)
chr3 (121-232)||(14153162-14153274)
chr3 (143-261)||(35065295-35065414)
chr3 (82-224)||(11562676-11562818)
chr3 (1-56)||(12512390-12512445)
chr3 (66-259)||(16728503-16728696)
chr3 (160-261)||(11886410-11886511)
chr3 (152-261)||(52213206-52213314)
chr3 (143-261)||(5206369-5206488)
chr3 (160-243)||(12512557-12512640)
chr3 (1-56)||(14250695-14250750)
chr3 (121-232)||(50348798-50348910)
chr3 (153-261)||(179437-179544)
chr3 (160-261)||(14250857-14250954)
chr3 (143-259)||(19884238-19884355)
chr3 (143-232)||(44273722-44273811)
chr3 (153-217)||(6819367-6819431)
chr3 (143-222)||(11258725-11258804)
chr3 (115-259)||(11850346-11850478)
chr3 (149-259)||(35353819-35353930)
chr3 (184-259)||(3803096-3803170)
chr3 (143-256)||(17693291-17693405)
chr3 (143-232)||(22307298-22307387)
chr3 (1-88)||(11886243-11886335)
chr3 (184-256)||(54520701-54520772)
chr3 (157-232)||(2842192-2842266)
chr3 (143-256)||(14508074-14508188)
chr3 (157-232)||(15932237-15932311)
chr3 (143-232)||(40807244-40807333)
chr3 (111-242)||(6155866-6155998)
chr3 (77-136)||(6805615-6805675)
chr3 (6-78)||(12269797-12269876)
chr3 (193-261)||(12275813-12275880)
chr3 (143-222)||(17538365-17538444)
chr3 (143-255)||(54876158-54876268)
chr3 (113-183)||(16050138-16050206)
chr3 (143-261)||(19569044-19569160)
chr3 (143-212)||(17046471-17046539)
chr3 (149-242)||(17691486-17691578)
chr3 (78-141)||(35961542-35961607)
chr3 (78-141)||(41860-41924)
chr3 (78-141)||(22652163-22652227)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-242)||(20596-20843)
[»] chr1 (39 HSPs)
chr1 (1-261)||(45754670-45754939)
chr1 (115-261)||(18275130-18275276)
chr1 (1-256)||(13302007-13302267)
chr1 (61-258)||(51476194-51476391)
chr1 (63-260)||(52983361-52983558)
chr1 (115-261)||(18270476-18270622)
chr1 (160-261)||(38057390-38057490)
chr1 (63-261)||(42696935-42697132)
chr1 (115-240)||(13528485-13528611)
chr1 (129-261)||(18823821-18823953)
chr1 (160-261)||(19761964-19762064)
chr1 (143-261)||(20587896-20588015)
chr1 (143-261)||(20592434-20592553)
chr1 (165-261)||(21181067-21181162)
chr1 (153-240)||(44822851-44822938)
chr1 (160-254)||(22349808-22349901)
chr1 (121-261)||(1642655-1642793)
chr1 (165-261)||(16400882-16400978)
chr1 (143-258)||(21046764-21046880)
chr1 (153-261)||(7792582-7792689)
chr1 (160-262)||(8276729-8276830)
chr1 (173-255)||(10813273-10813354)
chr1 (143-261)||(42912268-42912387)
chr1 (149-261)||(19675969-19676082)
chr1 (143-261)||(4596560-4596679)
chr1 (1-56)||(24726742-24726797)
chr1 (143-232)||(16059029-16059118)
chr1 (153-221)||(24815582-24815647)
chr1 (143-261)||(20634350-20634469)
chr1 (160-224)||(24726567-24726631)
chr1 (6-56)||(19761802-19761852)
chr1 (143-261)||(38887842-38887958)
chr1 (5-56)||(12328431-12328483)
chr1 (143-259)||(14238327-14238441)
chr1 (143-261)||(7052770-7052886)
chr1 (19-52)||(22124547-22124580)
chr1 (156-232)||(41227433-41227508)
chr1 (78-141)||(50000806-50000870)
chr1 (5-56)||(51327054-51327106)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-239)||(3661-3904)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-261)||(95499-95766)
[»] scaffold0453 (1 HSPs)
scaffold0453 (63-261)||(3250-3448)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-217)||(109423-109645)
scaffold0004 (115-254)||(59565-59704)
[»] scaffold0181 (1 HSPs)
scaffold0181 (61-243)||(34028-34211)
[»] scaffold0413 (1 HSPs)
scaffold0413 (61-261)||(10891-11091)
[»] scaffold0273 (1 HSPs)
scaffold0273 (63-261)||(6835-7033)
[»] scaffold2046 (1 HSPs)
scaffold2046 (65-261)||(325-521)
[»] scaffold0042 (2 HSPs)
scaffold0042 (4-261)||(28493-28753)
scaffold0042 (63-258)||(47205-47399)
[»] chr5 (22 HSPs)
chr5 (1-258)||(25250470-25250725)
chr5 (1-258)||(25314255-25314510)
chr5 (1-240)||(21618613-21618857)
chr5 (1-181)||(20469697-20469884)
chr5 (1-161)||(29914587-29914754)
chr5 (63-259)||(8952691-8952885)
chr5 (63-212)||(22357597-22357747)
chr5 (160-261)||(10953187-10953287)
chr5 (152-255)||(24277335-24277437)
chr5 (152-255)||(24384776-24384878)
chr5 (153-255)||(17812617-17812718)
chr5 (61-261)||(21406322-21406521)
chr5 (121-261)||(23200256-23200394)
chr5 (1-52)||(10953403-10953454)
chr5 (184-259)||(41876310-41876384)
chr5 (82-183)||(20565701-20565803)
chr5 (19-114)||(23469996-23470097)
chr5 (149-242)||(32608085-32608176)
chr5 (78-141)||(263190-263254)
chr5 (143-222)||(19920892-19920971)
chr5 (5-56)||(30615979-30616031)
chr5 (78-141)||(33473219-33473283)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-243)||(2503-2754)
[»] scaffold0338 (2 HSPs)
scaffold0338 (1-139)||(11397-11541)
scaffold0338 (78-261)||(3597-3782)
[»] scaffold0309 (2 HSPs)
scaffold0309 (129-261)||(6121-6253)
scaffold0309 (129-261)||(8273-8405)
[»] scaffold0490 (1 HSPs)
scaffold0490 (131-261)||(5039-5169)
[»] scaffold0328 (1 HSPs)
scaffold0328 (160-259)||(19383-19481)
[»] scaffold0010 (1 HSPs)
scaffold0010 (22-261)||(127010-127254)
[»] scaffold0630 (1 HSPs)
scaffold0630 (160-261)||(8277-8377)
[»] scaffold0149 (1 HSPs)
scaffold0149 (160-261)||(20862-20962)
[»] scaffold0429 (1 HSPs)
scaffold0429 (146-258)||(2713-2824)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-259)||(574-839)
[»] scaffold0628 (2 HSPs)
scaffold0628 (1-144)||(4101-4248)
scaffold0628 (1-144)||(8661-8808)
[»] scaffold0220 (3 HSPs)
scaffold0220 (160-254)||(13166-13259)
scaffold0220 (108-261)||(15977-16132)
scaffold0220 (155-258)||(17627-17730)
[»] scaffold0188 (1 HSPs)
scaffold0188 (129-261)||(342-474)
[»] scaffold0108 (1 HSPs)
scaffold0108 (160-261)||(5630-5730)
[»] scaffold0607 (1 HSPs)
scaffold0607 (153-261)||(2921-3028)
[»] scaffold0123 (1 HSPs)
scaffold0123 (61-243)||(1913-2098)
[»] scaffold1186 (1 HSPs)
scaffold1186 (82-242)||(800-960)
[»] scaffold0117 (1 HSPs)
scaffold0117 (129-261)||(40930-41062)
[»] scaffold0005 (1 HSPs)
scaffold0005 (82-242)||(187308-187468)
[»] scaffold0589 (2 HSPs)
scaffold0589 (157-261)||(3482-3586)
scaffold0589 (1-60)||(3693-3752)
[»] scaffold0371 (1 HSPs)
scaffold0371 (102-255)||(16825-16977)
[»] scaffold0107 (1 HSPs)
scaffold0107 (63-240)||(3113-3291)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-139)||(1216-1359)
[»] scaffold1662 (1 HSPs)
scaffold1662 (143-261)||(136-255)
[»] scaffold0737 (1 HSPs)
scaffold0737 (143-261)||(5428-5547)
[»] scaffold0126 (1 HSPs)
scaffold0126 (153-240)||(6034-6121)
[»] scaffold0065 (1 HSPs)
scaffold0065 (162-259)||(53376-53471)
[»] scaffold0007 (1 HSPs)
scaffold0007 (160-261)||(159689-159789)
[»] scaffold0070 (1 HSPs)
scaffold0070 (153-261)||(8272-8379)
[»] scaffold0529 (1 HSPs)
scaffold0529 (82-224)||(7594-7736)
[»] scaffold0375 (1 HSPs)
scaffold0375 (141-231)||(9016-9106)
[»] scaffold0520 (1 HSPs)
scaffold0520 (61-242)||(97-278)
[»] scaffold0308 (1 HSPs)
scaffold0308 (160-254)||(12554-12647)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-84)||(30409-30498)
[»] scaffold0083 (3 HSPs)
scaffold0083 (143-261)||(657-773)
scaffold0083 (143-261)||(5961-6077)
scaffold0083 (162-261)||(11446-11544)
[»] scaffold0825 (1 HSPs)
scaffold0825 (153-242)||(1545-1634)
[»] scaffold0077 (2 HSPs)
scaffold0077 (3-56)||(3139-3192)
scaffold0077 (143-259)||(33573-33687)
[»] scaffold0962 (1 HSPs)
scaffold0962 (166-258)||(1272-1363)
[»] scaffold0241 (3 HSPs)
scaffold0241 (81-224)||(4795-4938)
scaffold0241 (82-242)||(1624-1784)
scaffold0241 (143-255)||(4955-5065)
[»] scaffold0111 (2 HSPs)
scaffold0111 (143-261)||(13249-13368)
scaffold0111 (143-261)||(19516-19635)
[»] scaffold0509 (1 HSPs)
scaffold0509 (143-232)||(9473-9562)
[»] scaffold0064 (1 HSPs)
scaffold0064 (143-258)||(57969-58085)
[»] scaffold1633 (1 HSPs)
scaffold1633 (143-259)||(431-545)
[»] scaffold0326 (1 HSPs)
scaffold0326 (115-259)||(75-207)
[»] scaffold0075 (1 HSPs)
scaffold0075 (161-261)||(60473-60573)
[»] scaffold0026 (2 HSPs)
scaffold0026 (130-255)||(145960-146084)
scaffold0026 (77-136)||(21419-21479)
[»] scaffold1817 (1 HSPs)
scaffold1817 (143-258)||(112-228)
[»] scaffold0207 (1 HSPs)
scaffold0207 (143-259)||(15224-15338)
[»] scaffold0134 (1 HSPs)
scaffold0134 (143-221)||(9941-10019)
[»] scaffold0439 (2 HSPs)
scaffold0439 (143-261)||(11381-11497)
scaffold0439 (149-224)||(3716-3790)
[»] scaffold0379 (2 HSPs)
scaffold0379 (13-139)||(14432-14565)
scaffold0379 (3-48)||(4428-4473)
[»] scaffold1551 (1 HSPs)
scaffold1551 (13-49)||(106-142)
[»] scaffold0546 (1 HSPs)
scaffold0546 (204-259)||(7198-7253)
[»] scaffold0384 (1 HSPs)
scaffold0384 (165-232)||(8124-8190)
[»] scaffold0109 (1 HSPs)
scaffold0109 (204-259)||(6054-6109)
[»] scaffold0074 (1 HSPs)
scaffold0074 (19-54)||(8440-8475)
[»] scaffold0039 (1 HSPs)
scaffold0039 (210-261)||(10695-10746)
[»] scaffold0021 (1 HSPs)
scaffold0021 (149-255)||(168704-168808)
[»] scaffold1815 (1 HSPs)
scaffold1815 (204-261)||(1237-1294)
[»] scaffold1283 (1 HSPs)
scaffold1283 (143-212)||(1142-1210)
[»] scaffold0632 (1 HSPs)
scaffold0632 (143-258)||(386-502)
[»] scaffold0485 (1 HSPs)
scaffold0485 (19-52)||(10413-10446)
[»] scaffold0293 (1 HSPs)
scaffold0293 (19-56)||(17760-17797)
[»] scaffold0138 (1 HSPs)
scaffold0138 (78-141)||(33250-33315)
[»] scaffold0061 (2 HSPs)
scaffold0061 (143-212)||(15261-15329)
scaffold0061 (143-212)||(24319-24387)
[»] scaffold0001 (2 HSPs)
scaffold0001 (78-141)||(176125-176189)
scaffold0001 (13-49)||(446757-446793)


Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 22244883 - 22244617
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  22244883 ctcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttataattat 22244784  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtt 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22244783 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattaagctacatatattatgttgaaaatgtatgatatagaaaatattattgtt 22244684  T
Q  195 tatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  22244683 tatatctttcaagttgttattattaatgtttctatgttgcaagttgttttatgttgatgtctctgct 22244617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 23947679 - 23947414
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || ||      ||||||||||||||||||||||||||||||||||    
T  23947679 ctcagtggcagtcaaccttgtttagggttcttgggatctttgtcgcacgtgatgctcagagttggtctttggggtaggaatgaaagttgtttataattat 23947580  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtt 194  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  23947579 attgtggttcagtgagtctgaattaaaatgattaatgtttttggttaattgagctacatatattatg-tggaaatgtatgatatagaaaatattattgtt 23947481  T
Q  195 tatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  23947480 tatatcattcaagttgttattattaatgttgctatgttgcaagttgttttatgttgctgtctctgct 23947414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 17907540 - 17907807
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| |||||||||||||||||| ||| ||||||| |||      ||||||||||| |||| |||||||||||||   |    
T  17907540 ctcagtggcagtcagccttagttagagttcttgcgatctttgtcacacctgatgttatgagttggtctttggggtagaaatggaagttgtttataaaggt 17907639  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || |   |||||||| ||| ||||||||||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||||||||||||| ||||    
T  17907640 atagcctttcagtgaatctaaattaaaatgattaatgttgttggttaatgtgaaatacatatattatgtggaaaaagtatgatatagaaaatattgttgt 17907739  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  17907740 tcatatcattcaagttgatattattaatgttgctatgttgcaagttgttttatgttgttgtctctgct 17907807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22318527 - 22318772
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || | ||||| |||||||||||||||||||||||||| ||||||| ||      |||||||||||||||||||| |||||||| |    
T  22318527 ctcagtggcagtcagccttatttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtttttggggtaggaatgaaagttgcttataattgt 22318626  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    |||||  ||||||||||||||||||| |||| || ||||||||| ||| ||||| ||||||||||| || || | |||||||||||| ||||||| ||||    
T  22318627 attgtctttcagtgagtctgaattaatatgaatattgttgttggataatttgagatacatatattacgtggatattgtatgatatag-aaatattgttgt 22318725  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    | ||||| ||||||||||| || ||||||||  |||||| |||||||    
T  22318726 tcatatcattcaagttgttgttgttaatgttgttatgttgcaagttg 22318772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 258
Target Start/End: Complemental strand, 23889141 - 23888942
Alignment:
Q  59 gactttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatat 157  Q
    |||||||||||||||||| |||||||||||||   |||     |||||||| ||| || ||| ||||||||||||||||||||||| |||||||||||||    
T  23889141 gactttggggtaggaatggaagttgtttataaaagtataacctttcagtgaatctaaactaatatgattaatgttgttggttaatttgagctacatatat 23889042  T
Q  158 tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctc 257  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||  || |||| ||||||| ||||||||| ||||||    
T  23889041 tatgtggaaaatgtatgatatagaagatattgttgtttatatcgttcaagttgttattattaatgtagctgtgttgcaagttg-tttatgttgctgtctc 23888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 62 - 261
Target Start/End: Original strand, 22584372 - 22584572
Alignment:
Q  62 tttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaat-gattaatgttgttggttaat-tgagctacatatatta 159  Q
    ||||||||||||||| |||||||||||||   ||| ||  |||||||| ||| || ||| || | |||||||||||||||||| | ||||||||||||||    
T  22584372 tttggggtaggaatggaagttgtttataaaggtatagtctttcagtgaatctaaactaatatggtttaatgttgttggttaatctaagctacatatatta 22584471  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||  |||||||||||||| ||||||||  ||||||||||| ||||||| ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  22584472 tgtgaaaaatgtatgatattgaaaatatcgttgtttatatcattcaagtggttattattaatgttgctatgttgcaagttg-tttatgttgctgtctctg 22584570  T
Q  260 ct 261  Q
    ||    
T  22584571 ct 22584572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 17218068 - 17217802
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||  || |  ||||||||||| |||||||| |||||||||||||| |||      |||| ||||||||||| |||||||||  ||   |    
T  17218068 ctcagtggcagtcggccttacttagggttctttcgatctttatcgcacgtgatgttatgagttggtctttcgggtaggaatggaagttgttttcaaaggt 17217969  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||      |||| ||||||| ||| |||||||||||||||| ||||| || ||  |||||||||||||| |||| |||||||||||||||||| | ||||    
T  17217968 ataacctctcagagagtctgtatttaaatgattaatgttgtcggttattttgaattacatatattatgtggaaagtgtatgatatagaaaataatgttgt 17217869  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||| |  |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  17217868 t-atatcatctaagttgttattattaatgttgctatgttgcaagttgttttatgttgctgtctctgct 17217802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 242
Target Start/End: Original strand, 31723202 - 31723428
Alignment:
Q  22 ttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctga 115  Q
    |||| ||||||||||||||||||||||||||||||||||      |||||||||||||||  ||||||||||||| | ||| ||  ||||||||||||||    
T  31723202 ttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaattgaagttgtttataaatgtatagtatttcagtgagtctga 31723301  T
Q  116 attaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttat 214  Q
    ||||| |||| || |||||||   ||| ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| ||||||||||| |    
T  31723302 attaatatgaatattgttgttaaataatttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgt 31723400  T
Q  215 tattaatgtttctatgttacaagttgtt 242  Q
    | ||||||||  |||| | |||||||||    
T  31723401 tgttaatgttgttatgatgcaagttgtt 31723428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 19699544 - 19699280
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt-----tggggtaggaatgaaagttgtttataattatattg 98  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||     | || |||||||| ||||||||||| |   ||| |    
T  19699544 agtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgtgagttgatcttaggataggaatggaagttgtttattaagttatag 19699445  T
Q  99 tggttcagtgagtctgaattaaaatgattaatg-ttgttggttaattgagctac--atatattatgttgaaaatgtatgatatagaaaatattattgttt 195  Q
       | ||| |||  ||||| ||| ||||||||| |||||||||| ||||| ||   ||||||| ||||||||||||||||||| |||| | |||||||||    
T  19699444 atttacagagagcatgaatcaaa-tgattaatgattgttggttagttgagatatttatatattgtgttgaaaatgtatgatatggaaattgttattgttt 19699346  T
Q  196 atatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||  | |||||||||| |||||||||  ||||| |  |||||| ||||||||||||||||||||    
T  19699345 atattatccaagttgttagtattaatgtggctatgatgtaagttgctttatgttgttgtctctgct 19699280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 45471030 - 45471277
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| |||||||  |||||||||||||| ||| |||||| |||| || ||      |||| ||||||||||||||||| ||||||||    
T  45471030 ctcagtggcagtcaaccttgtttagttttcttgcgatctttttcggacgtgacgttccgagttggtccttgggataggaatgaaagttgttcataattat 45471129  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||| ||  |||||||||||||||| || | || || |||||| ||| ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||    
T  45471130 attgttgtgtagtgagtctgaattaatataaatattgatgttggataatttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgt 45471228  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| |||||||| || | ||||||||| |||| || | |||||||    
T  45471229 tcatatcattcaagttattgtgattaatgttgctatattgcgagttgtt 45471277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 255
Target Start/End: Original strand, 20024860 - 20025113
Alignment:
Q  6 tggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattatattgt 99  Q
    |||||||||||| ||||||| |||||||| |||||| |||||||||| |||| || ||      ||||||||||||| |||||||| ||||||||||| |    
T  20024860 tggcagtcaaccttgtttagtgttcttgcaatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatatttt 20024959  T
Q  100 ggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttata 198  Q
     ||  |||||||||||||||| |||| || || |||||| ||| ||||| ||||||||||||||  | | |||||| ||||| ||||||| ||||| |||    
T  20024960 tgtgtagtgagtctgaattaatatgaatattgatgttggataatttgagatacatatattatgtgaatattgtatg-tatag-aaatattgttgttcata 20025057  T
Q  199 tctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    || ||||||||  | | ||||||||| ||||||| ||||||||| | ||||||||||    
T  20025058 tcattcaagttaatgtgattaatgttgctatgttgcaagttgttat-tgttgttgtc 20025113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 9640 - 9499
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactttg------gggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| || |      ||||||||||||||||||||||||| |||    
T  9640 ctcagtggcagtcaaccttgtttagggttcttgcgatctt-gtcgcacatgatgttctgagttagtcgttagggtaggaatgaaagttgtttataactat 9542  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttg 137  Q
    ||||| ||||||||||||||||| |  |||  |||||||||||    
T  9541 attgtagttcagtgagtctgaatcagtatggataatgttgttg 9499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36727726 - 36727894
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||| |||||| || |  |||| |||||||||||||||||||||||||||||| |||      |||||||||||||||| ||||||||||||| | |    
T  36727726 ctcagtgacagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttatgagtttgtctttggggtaggaatggaagttgtttataaatgt 36727825  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgt 162  Q
    || ||  ||||||||||||||||||| |||| || ||||||||  ||| ||||| ||||||||||||||    
T  36727826 atagtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgt 36727894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 39695267 - 39695367
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||| ||||    
T  39695267 tgttgaaaatgtatgatataaaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgttgtttctg 39695365  T
Q  260 ct 261  Q
    ||    
T  39695366 ct 39695367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 42266331 - 42266432
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||  ||||| ||||||| |||| |||||||||||||||| ||||    
T  42266331 tgttgaaaatgtatgatatggaaatcattattgtttatatcattcaagttgttattatcgatgttgctatgttgcaagatgttttatgttgttgtttctg 42266430  T
Q  260 ct 261  Q
    ||    
T  42266431 ct 42266432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 22259063 - 22259203
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatta 219  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||| ||||||||||||||||| | ||| ||||| | ||||||||||||||||||    
T  22259063 aatgattaatgttgttggttaatgtgaaatacatatattatg-tgaaaaggtatgatatagaaaataatgttg-ttataccattcaagttgttattatta 22259160  T
Q  220 atgtttctatgtt-acaagttgttttatgttgttgtctctgct 261  Q
    ||| | | |||||   |||||||| ||||||||||||||||||    
T  22259161 atgatgccatgttgtgaagttgttgtatgttgttgtctctgct 22259203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 20455318 - 20455218
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    ||||||||| || |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  20455318 tatattatgatggaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 20455220  T
Q  253 gt 254  Q
    ||    
T  20455219 gt 20455218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 20460296 - 20460196
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    ||||||||| || |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  20460296 tatattatgatggaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 20460198  T
Q  253 gt 254  Q
    ||    
T  20460197 gt 20460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 20454561 - 20454454
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  | |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  20454561 tatattatgagggaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 20454463  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  20454462 gtccctgct 20454454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 254
Target Start/End: Complemental strand, 19882365 - 19882187
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctg-aattaaaatgattaatg-ttgttggttaattga-gctacatatattatgttgaaaatgtatg 174  Q
    ||||||||||||||  || ||| |||||| ||||||| |||||| |||||||||| ||||| |||| || | | ||  |||||||||  | |||| | ||    
T  19882365 aagttgtttataatattaatgttgttcagagagtctgcaattaagatgattaatgattgttagttagtttaagatatttatattatgagggaaatctgtg 19882266  T
Q  175 atatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||| | ||||||||||||    
T  19882265 atatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagtt-tcttatgttgttgt 19882187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 36727984 - 36728126
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  || |||||||||||||||| |||| || ||||||||  ||| ||||| ||||||||||||||  | | ||||||||||||    
T  36727984 tgtttataattgtattgtcttttagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 36728083  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
     ||||||| ||||| ||||| ||||||||||| || ||||||||    
T  36728084 -aaatattgttgttcatatcattcaagttgttgttgttaatgtt 36728126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 25849185 - 25849262
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaag 237  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||| || |||| ||||    
T  25849185 tgttgaaaatgtatgatatggaaattattattgtttatatcattcaagttgttattattgatgttgctgtgttgcaag 25849262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 15635910 - 15635989
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    |||||||||  |||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| ||| ||||||    
T  15635910 tatattatgaggaaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatatttttatgtt 15635989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 31723458 - 31723618
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  |||||||||| |||||||| |||| || ||||||||  ||| ||||| |||||||||||| |  | | ||||||||||||    
T  31723458 tgtttataattgtattgtctttcagtgagtatgaattaatatgaatattgttgttgaataatttgagatacatatattatctgaatattgtatgatatag 31723557  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
     ||||||| ||||| ||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  31723558 -aaatattgttgttcatatcattcaagttgttgctgttaatgttgttatgatgcaagttgtt 31723618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 18302707 - 18302762
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttatt 215  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  18302707 tgttgaaaatgtatgatatataaattattattgtttatatcattcaagttgttatt 18302762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 19140102 - 19140013
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||    
T  19140102 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgtt 19140013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23900675 - 23900730
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||| |  |||| ||||||||||||||||||||||||||||||    
T  23900675 ctcagtggcagtcaaccttacttagtgttcttgcgatctttgtcgcacgtgatgtt 23900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 20179251 - 20179355
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtc 255  Q
    |||||| ||||| ||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| |  ||||||   |||||||| ||||||||||||    
T  20179251 ttatgtggaaaaggtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgttatgttgtgaagttgttgtatgttgttgtc 20179349  T
Q  256 tctgct 261  Q
    | ||||    
T  20179350 tttgct 20179355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 22252992 - 22253028
Alignment:
Q  20 gtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    |||||||||||||||||||||||||||||||||||||    
T  22252992 gtttagggttcttgcgatctttgtcgcacgtgatgtt 22253028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25849018 - 25849072
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    |||||||||  |||||| |||| |||||||||||||||||||||||||||||||||    
T  25849018 ctcagtggccatcaaccttgtt-agggttcttgcgatctttgtcgcacgtgatgtt 25849072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 20084409 - 20084467
Alignment:
Q  203 tcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||| |||||||||||||||  |||| | ||||||||| ||||||||||||||||||    
T  20084409 tcaagtggttattattaatgttgttatgattcaagttgttgtatgttgttgtctctgct 20084467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 23418642 - 23418545
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    |||||||||  |||||||| |||| |||||||||||||||| |||||   ||| |||| ||||||  |||||| |||| || |||||||||||||||||    
T  23418642 tgttgaaaacatatgatatggaaattattattgtttatatcattcaaaccgttgttatcaatgttgttatgttgcaagatg-tttatgttgttgtctct 23418545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 39936725 - 39936814
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | | ||| ||| | ||||||||||||||||||||| | |||||||    
T  39936725 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgtggtt-ataccattcaagttgttattattaatgatgctatgtt 39936814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23418808 - 23418753
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||| || |||||| |||||||||||||||||||| ||||||||  |||||||    
T  23418808 ctcagtgacattcaaccttgtttagggttcttgcgatccttgtcgcatatgatgtt 23418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 3273351 - 3273282
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgtt 133  Q
    |||||||| |||||||||||||| || |||||| || ||||||| |||| |||| ||| ||||||||||||    
T  3273351 ttggggtatgaatgaaagttgttaatgattataatgaggttcagagagtatgaa-taagatgattaatgtt 3273282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 5760910 - 5760842
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  5760910 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 5760842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 20501927 - 20501960
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    |||||||||||||||||||| |||||||||||||    
T  20501927 tgtttagggttcttgcgatccttgtcgcacgtga 20501960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 22381560 - 22381589
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcac 48  Q
    ||||||||||||||||||||||||||||||    
T  22381560 tgtttagggttcttgcgatctttgtcgcac 22381589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 8414365 - 8414429
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  8414365 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 8414429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 11775119 - 11775055
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  11775119 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 11775055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 21985098 - 21985134
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  21985098 caaccttgtttagggtttttgcgatctttgtcgcacg 21985134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 261
Target Start/End: Original strand, 31735521 - 31735761
Alignment:
Q  27 gttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaa 120  Q
    ||||||||||||||||||||||||||||||||||      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31735521 gttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaa-gttgtttataattatattgtggttcagtgagtctgaattaa 31735619  T
Q  121 aatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatta 219  Q
    |||||||||||||||||||||||| ||  |||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  31735620 aatgattaatgttgttggttaatttgaaatacatatattatgtggaaaatgtttgatatagaaaatattgttgtttatatcattcaaattgttattatta 31735719  T
Q  220 atgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  31735720 atgttgctatgttacaagttgttttatgttgctgtctctgct 31735761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 261
Target Start/End: Original strand, 22212144 - 22212346
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaat-taaaatgattaatgttgttggttaatt-gagctacatatatt 158  Q
    ||||||||||||||||||||| ||||||||||  |||||  | |||||||||||||  ||| |||| |||||||||||||||||| ||| ||||||||||    
T  22212144 ctttggggtaggaatgaaagtcgtttataattgcattgtcttacagtgagtctgaaagtaatatgaataatgttgttggttaatttgagatacatatatt 22212243  T
Q  159 atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    ||||  ||| |||||||||||||||||| | ||||||||||| ||||||||||||||||| |||||  | |||| ||||||||||||||||| || ||||    
T  22212244 atgtgaaaattgtatgatatagaaaataattttgtttatatcattcaagttgttattattgatgttgttgtgttgcaagttgttttatgttgctgcctct 22212343  T
Q  259 gct 261  Q
    |||    
T  22212344 gct 22212346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 261
Target Start/End: Original strand, 13750995 - 13751191
Alignment:
Q  65 ggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatgtt 163  Q
    |||||||||||| |||||||||||||   ||| |   |||||| | ||| || ||| || ||| |||||||||||||||| | |||| |||||||||||     
T  13750995 ggggtaggaatggaagttgtttataaaggtatagcctttcagttaatctaaactaatataattgatgttgttggttaatttaagctatatatattatgtg 13751094  T
Q  164 gaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||||||||||||||||||  |||||||| || |||||||||||||||||||| || ||||||| |||||||  |||||||||||||||||||    
T  13751095 gaaaatgtatgatatagaaaatatcgttgtttatttcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtctctgct 13751191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 101 - 240
Target Start/End: Original strand, 19443959 - 19444099
Alignment:
Q  101 gttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatat 199  Q
    ||||||||| |||||  ||| || ||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  19443959 gttcagtgaatctgagctaatataattgatgttgttggttaattcaagctatatatattatgtggaaaatgtatgatatagaaaatatcgttgtttatat 19444058  T
Q  200 ctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    | ||||||||||| |||||||| || ||||||| |||||||    
T  19444059 cattcaagttgttgttattaatattgctatgttgcaagttg 19444099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 23501107 - 23500890
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||      | ||||||||||| |||||||| |||||| ||      
T  23501107 ctcagtggcagtcaaccttgtttagggttcttgcgatctctgtcgcacgtaacgttctgagttggtccttggggtaggagtgaaagttatttatagttgg 23501008  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    | |||  ||||||||  ||||||||| |||| || ||||||||| ||| ||||| ||| ||||||||||  | | |||||||||||| ||||||| ||||    
T  23501007 actgtctttcagtgatcctgaattaatatgaatattgttgttggataatttgagatacttatattatgtgaatattgtatgatatag-aaatattgttgt 23500909  T
Q  194 ttatatctttcaagttgtt 212  Q
    | ||||| |||||||||||    
T  23500908 tcatatcattcaagttgtt 23500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 611062 - 610955
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  611062 tatattatgaggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 610964  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  610963 gtccctgct 610955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 16133349 - 16133481
Alignment:
Q  101 gttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatat 199  Q
    ||||||||| |||||  ||| || ||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||| |  ||||||||||    
T  16133349 gttcagtgaatctgagctaatataattgatgttgttggttaattcaagctatatatattatgtggaaaatgtatgatatagaaaatgtcgttgtttatat 16133448  T
Q  200 ctttcaagttgttattattaatgtttctatgtt 232  Q
    | ||||||||||| |||||||| || |||||||    
T  16133449 cattcaagttgttgttattaatattgctatgtt 16133481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 29848235 - 29848342
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  29848235 tatattatgaggaaaatgtgtgatatagaaaatattgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 29848333  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  29848334 gtccctgct 29848342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 18658528 - 18658426
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| ||| |||  ||||||||||    
T  18658528 tatattatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaaattg-cttatgttgtt 18658430  T
Q  253 gtct 256  Q
    ||||    
T  18658429 gtct 18658426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6083360 - 6083528
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||| |||||||||||| || |||| ||||||||| |||||||||||||||  |||||||      |||| ||||||||||||||||||||||||||| |    
T  6083360 ctcaatggcagtcaaccttgcttagtgttcttgcgttctttgtcgcacgtgtcgttctgagttggtctttagggtaggaatgaaagttgtttataattgt 6083459  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttgg-ttaattgagctacatatattatgt 162  Q
    ||| |  |||| ||||||||||||||  ||| |||||||||||| | ||||||  | ||||||||||||    
T  6083460 attatctttcaatgagtctgaattaatctgaataatgttgttggataaattgaaatgcatatattatgt 6083528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 24441304 - 24441140
Alignment:
Q  94 tattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattg 192  Q
    ||||||| |||||||||||||||||||| ||||||| || |||| | | ||||| |||||||||| |||| ||||| ||||||||| ||| ||| | |||    
T  24441304 tattgtgtttcagtgagtctgaattaaa-tgattaa-gtagttgttaatttgagttacatatatttatgtggaaaaggtatgatattgaagataatgttg 24441207  T
Q  193 tttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    || ||| | |||||||||||||||||||| || ||||||| |||||||  |||||||||||||||||||    
T  24441206 tt-ataccattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtctctgct 24441140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 19829691 - 19829773
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||| ||||||| |||| ||||    
T  19829691 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgatattattgatgttgctatgttgcaagatgtt 19829773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 259
Target Start/End: Complemental strand, 24267178 - 24266982
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   |||     |||||||| ||| |  ||| || ||| |||||||||||||||| | |||| ||||||||||    
T  24267178 ttggggtaggaatggaagttgtttataaaggtataacctttcagtgaatctaagctaatataattgatgttgttggttaatttaagctatatatattatg 24267079  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |  ||||||||||||||| ||||| |  ||||||||||| ||||||||||| |||||||| ||  |||||| |||||||  |||||||| ||||||||    
T  24267078 tgaaaaatgtatgatataaaaaatgtccttgtttatatcattcaagttgttgttattaatattgttatgttgcaagttg-cttatgttgctgtctctg 24266982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 15891418 - 15891537
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   ||||||    
T  15891418 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataattttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttg 15891516  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  15891517 ttgtatgttgttgtctctgct 15891537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 22376485 - 22376630
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||| | | | ||||||||||||||||||||||||||||||  |||||| ||| ||      |||||||||||||| ||||||||| |||  |    
T  22376485 ctcagtggcagactatcttgtttagggttcttgcgatctttgtcgcacaagatgttatgagttggtccttggggtaggaatgagagttgtttaaaatatt 22376584  T
Q  95 attgtggttcagtgagtctga-attaaaatgattaatgttgttggt 139  Q
    ||||| |||||| |||||||| | ||| ||||||||||||||||||    
T  22376585 attgttgttcagagagtctgagactaagatgattaatgttgttggt 22376630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 17318852 - 17318956
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtc 255  Q
    |||||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   |||||||| ||||||||||||    
T  17318852 ttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatgttgttgtc 17318950  T
Q  256 tctgct 261  Q
    ||||||    
T  17318951 tctgct 17318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 13764672 - 13764565
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  | |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| | |||||  ||||||||||    
T  13764672 tatattatgagggaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgctagttg-cttatgttgtt 13764574  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  13764573 gtccctgct 13764565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24550853 - 24550908
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  24550853 ctcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcgcatgatgtt 24550908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 18259824 - 18259902
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggt 139  Q
    |||||||||| |||||||||||||||| | | ||||||| |||||| |||||||| |||| |||||||| |||||||||    
T  18259824 ctttggggtaagaatgaaagttgtttaaattaatattgttgttcagagagtctgagttaagatgattaacgttgttggt 18259902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 23491974 - 23492134
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||| |  ||||||||  ||| ||||| ||||||||||||||  | | |||||||||||     
T  23491974 tgtttataattgtattgtctttcagtgagtctgaattaatatgaattttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata- 23492072  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    |||| | | ||||| ||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  23492073 aaaagagtgttgttcatatcattcaagttgttgcttttaatgttgttatgatgcaagttgtt 23492134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 23497572 - 23497732
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||| |  ||||||||  ||| ||||| ||||||||||||||  | | |||||||||||     
T  23497572 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata- 23497670  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    |||| | | ||||| ||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  23497671 aaaagagtgttgttcatatcattcaagttgttgcttttaatgttgttatgatgcaagttgtt 23497732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 5110466 - 5110598
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||            ||| ||||||||||| ||| ||||||||    
T  5110466 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtat------------attgttgtttatatcattcgagttgtta 5110553  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||| ||| ||||||| ||||||| ||||||||| ||||||||    
T  5110554 ttattaacgttgctatgttgcaagttg-tttatgttgctgtctctg 5110598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 24551020 - 24551117
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||   | ||||||||| ||||| ||||||| |||| |  ||||||||| ||||||||    
T  24551020 tgttgaaaatgtatgatatggaaattattattgtttatatcattc---tagttattattgatgttgctatgttgcaagat-atttatgttgatgtctctg 24551115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 27126207 - 27126309
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtc 255  Q
    |||||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||   |||||||| ||||||| ||||    
T  27126207 ttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatgttgctgtc 27126305  T
Q  256 tctg 259  Q
    ||||    
T  27126306 tctg 27126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 5289825 - 5289957
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||            ||| ||||||||||| ||| ||||||||    
T  5289825 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtat------------attgttgtttatatcattcgagttgtta 5289912  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||  ||| ||||||| ||||||| ||||||||| ||||||||    
T  5289913 ttattaccgttgctatgttgcaagttg-tttatgttgctgtctctg 5289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 31734045 - 31733926
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttac-aagttg 240  Q
    ||||| |||||||||| ||||  |||| ||||||||||||||||| | ||||| ||| | || |||||||||||||||||| |  ||||||   ||||||    
T  31734045 ttgagttacatatatttatgtgaaaaaggtatgatatagaaaataatgttgtt-ataccatttaagttgttattattaatgatgttatgttgtgaagttg 31733947  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  31733946 ttgtatgttgttgtctctgct 31733926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 20078000 - 20078102
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtc 112  Q
    ||||||||||||||||||||||||||||||| |||||| |||      | |||||||||||||| | |||| |||||||  ||| |  ||||||||||||    
T  20078000 tgtttagggttcttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgattataatactatcgatgttcagtgagtc 20078099  T
Q  113 tga 115  Q
    |||    
T  20078100 tga 20078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 23150981 - 23151059
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaat 221  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| || || | ||||||||||||||||||||    
T  23150981 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttgtaccattcaagttgttattattaat 23151059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 48
Target Start/End: Complemental strand, 16245647 - 16245612
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcac 48  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16245647 caaccttgtttagggttcttgcgatctttgtcgcac 16245612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 25738680 - 25738637
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||    
T  25738680 caaccttgtttagggttcttgcgatctttgtcgcatgagatgtt 25738637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 15896246 - 15896200
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||| ||| ||||| || ||||||||||||||||||||||||||||    
T  15896246 cagtgacagacaaccttgattagggttcttgcgatctttgtcgcacg 15896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 16245592 - 16245514
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctg-aattaaaatgatt-aatgttgttggt 139  Q
    ||||||||||||||| |||||||||| ||  || ||| |||||| ||||||| |||||| |||||| ||||||||||||    
T  16245592 ttggggtaggaatgagagttgtttatgatattaatgtagttcagagagtctgaaattaagatgattaaatgttgttggt 16245514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 18708836 - 18708748
Alignment:
Q  143 ttgagctacatata-ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||| |||||| ||||| ||||||||||||||||| | ||| ||||| | |||||||| |||||||||||| | |||||||    
T  18708836 ttgagttacatatagttatgtggaaaaggtatgatatagaaaataatgttg-ttataccattcaagtt-ttattattaatgatgctatgtt 18708748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 19655892 - 19655972
Alignment:
Q  132 ttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||||| ||||| ||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  19655892 ttgttggataattcgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 19655972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 23491846 - 23491914
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| |||||||||| || ||||| |||||||||||    
T  23491846 ttgagatacatatattatgtgaatattgtatgatatag-aaatattatttttcatatcattcaagttgtt 23491914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 23497444 - 23497512
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| |||||||||| || ||||| |||||||||||    
T  23497444 ttgagatacatatattatgtgaatattgtatgatatag-aaatattatttttcatatcattcaagttgtt 23497512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 7827309 - 7827234
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||| |||||||||| ||||  |||| ||||||||||||||||| | ||| ||||| | |||||||||||||||||    
T  7827309 ttgagttacatatatttatgtgaaaaaggtatgatatagaaaataattttg-ttataccattcaagttgttattatt 7827234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 23956259 - 23956195
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  23956259 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 23956195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 4 - 258
Target Start/End: Complemental strand, 704 - 444
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatatt 97  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||      ||||||| || |||||||||||||||||||||||| |    
T  704 agtggcagttaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttgggataagaatgaaagttgtttataattatact 605  T
Q  98 gtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgttta 196  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  604 gtggttcagtgagtttgaattaaa-tgattaatgttgttggtaaatttgagctacatatattatgtggaaaatgtatgatatagaaaatattattgtgta 506  T
Q  197 tatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    |||| |  |||||||||||||| ||||| ||| |||  ||||||||||||||||||||||||    
T  505 tatcatctaagttgttattattcatgttgctacgttgtaagttgttttatgttgttgtctct 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 4 - 258
Target Start/End: Complemental strand, 8959 - 8699
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatatt 97  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||      ||||||| || |||||||||||||||||||||||| |    
T  8959 agtggcagttaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttgggataagaatgaaagttgtttataattatact 8860  T
Q  98 gtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgttta 196  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  8859 gtggttcagtgagtttgaattaaa-tgattaatgttgttggtaaatttgagctacatatattatgtggaaaatgtatgatatagaaaatattattgtgta 8761  T
Q  197 tatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    |||| |  |||||||||||||| ||||| ||| |||  ||||||||||||||||||||||||    
T  8760 tatcatctaagttgttattattcatgttgctacgttgtaagttgttttatgttgttgtctct 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 44071971 - 44071706
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| ||||||||||||||||||||||||||||||||||      |||||||||||||||| ||||||||||||||| |    
T  44071971 ctcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgtaagttgtttataattgt 44071872  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    |||||  ||||||||||||||||||| ||||||| ||||||||| ||| ||||| |||||||||||||| |||| |||||||||||| ||||||| ||||    
T  44071871 attgtctttcagtgagtctgaattaacatgattattgttgttggataatttgagatacatatattatgtggaaattgtatgatatag-aaatattgttgt 44071773  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||| |||||||||||||||||| ||||  |||||| ||||||| || |||||||||||| ||||    
T  44071772 tcatatcgttcaagttgttattattagtgttgttatgttgcaagttg-ttgatgttgttgtctttgct 44071706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3539220 - 3538972
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| |  ||||||      ||||||||||||||||||||||||||||||||||    
T  3539220 ctcagtggcagtcaaccttgtttagggttcttgcgatctctgtcgcacgtaacattctgagttggtctttggggtaggaatgaaagttgtttataattat 3539121  T
Q  95 attgtggttcagtg-agtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattg 192  Q
    ||||| |||||||| |||||||||||| |||| |  ||||||||| ||| ||||| ||||||||||||||  | | |||||||||||| ||||||| |||    
T  3539120 attgttgttcagtgaagtctgaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatag-aaatattgttg 3539022  T
Q  193 tttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    || ||||| ||||||||||| || || |||||  |||||| |||||||||    
T  3539021 ttcatatcattcaagttgttgttgttgatgttgttatgttgcaagttgtt 3538972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 22 - 261
Target Start/End: Complemental strand, 27852037 - 27851793
Alignment:
Q  22 ttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctga 115  Q
    |||| ||||||||||||||||||||||||||||||||||      |||||||||||||||| ||||| ||||||| | ||| ||  ||||||||||||||    
T  27852037 ttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatggaagttctttataaatgtatagtctttcagtgagtctga 27851938  T
Q  116 attaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttat 214  Q
    ||||| | |||||  |||||||||||| ||||  |||||||||||||| |||| |||||||||||| ||||||| ||||| ||||| |||||||||||||    
T  27851937 attaataagattatagttgttggttaatttgaaatacatatattatgtggaaattgtatgatatag-aaatattgttgttcatatcattcaagttgttat 27851839  T
Q  215 tattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||| | ||||  |||||| ||||||  || |||||||||||| ||||    
T  27851838 tatcagtgttgttatgttgcaagtt-attgatgttgttgtctttgct 27851793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 22 - 261
Target Start/End: Complemental strand, 27860743 - 27860499
Alignment:
Q  22 ttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctga 115  Q
    |||| ||||||||||||||| |||||||| ||||||||| ||      ||||||||||||| ||||||||| ||| | ||| ||  || |||||||||||    
T  27860743 ttagtgttcttgcgatctttatcgcacgtaatgttctgagttggtcattggggtaggaatggaagttgtttttaaatgtatagtctttaagtgagtctga 27860644  T
Q  116 attaaaatgattaatgttgttggtt-aattgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttat 214  Q
    ||||| ||||||||||||||||||| ||||||| || ||||||||||| |||| |||||||||||| ||||||| ||||| ||||| |||||||||||||    
T  27860643 attaatatgattaatgttgttggttaaattgagatagatatattatgtggaaattgtatgatatag-aaatattgttgttcatatcattcaagttgttat 27860545  T
Q  215 tattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||| | ||||  |||||| ||||||| || |||||||||||| ||||    
T  27860544 tatcagtgttgttatgttgcaagttg-ttgatgttgttgtctttgct 27860499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 18390901 - 18391124
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||| | || |  |||| ||| |||||||||||||||||||||||||| ||| ||      |||||||||||||||||||||||||||   |    
T  18390901 ctcagtggcagttagccttacttagtgttgttgcgatctttgtcgcacgtgatgttatgagttggtccttggggtaggaatgaaagttgtttataaaggt 18391000  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || |   |||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||||||| |||||| |||||||| | ||||||| ||||    
T  18391001 atagcctttcagtgagtctaaattaatatgattatttttgttggttaatttgagctacatatattatgtggaaaatatatgatatcggaaatattgttgt 18391100  T
Q  194 ttatatctttcaagttgttattat 217  Q
    | ||||| ||||||||||||||||    
T  18391101 tcatatcattcaagttgttattat 18391124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 255
Target Start/End: Complemental strand, 25141565 - 25141307
Alignment:
Q  2 tcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattata 95  Q
    ||||||||||||| || |  |||| |||||||||||||||||||||||||| |||||||      ||||||||||| |||||||||||||||||||| ||    
T  25141565 tcagtggcagtcagccttaattagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtagaaatgaaagttgtttataattgta 25141466  T
Q  96 ttgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtt 194  Q
    ||||  |||| |||||||||||||| || |||| ||||||||  ||| ||||| ||||||||||||||  | | | |||||||||| ||||||| |||||    
T  25141465 ttgtctttcactgagtctgaattaatataattattgttgttgaataatttgagatacatatattatgtgaatattttatgatatag-aaatattgttgtt 25141367  T
Q  195 tatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
     ||||| |||||||||||  | ||||||||  |||| | ||||||||| | ||||||||||    
T  25141366 catatcattcaagttgttgctgttaatgttgttatgatgcaagttgttat-tgttgttgtc 25141307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 19358348 - 19358152
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatata-tta 159  Q
    |||||||| | |||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||| ||||||| | | ||||| |||||||| |||    
T  19358348 ctttggggcatgaatgaaagttgttcataattatattgtgtttcagcgagtctgaatt-aaatgattaa-gttgttgttaatttgagttacatatattta 19358251  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtctct 258  Q
    ||| ||||| ||||||||||||||||| | ||| ||||||| ||||||||||||||||||||| | |||||||   |||||||| ||||||| |||||||    
T  19358250 tgtggaaaaggtatgatatagaaaataatgttg-ttatatcattcaagttgttattattaatgatgctatgttgtaaagttgttgtatgttgatgtctct 19358152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 261
Target Start/End: Original strand, 10897445 - 10897625
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatt-atgttgaaaatgtatgatata 179  Q
    ||||||||||||||| |||  |||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||| |||| |||||  |||| ||||    
T  10897445 tgtttataattatatcgtgtatcagagagtctgaattaaa-tgattaatgttgttggtaaatttgagctacatatatttatgtggaaaagatatgttata 10897543  T
Q  180 gaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
     ||||||||  |||||||| | | ||||| ||||||||||||||| ||||| | ||||||||| ||||||||||||||||||    
T  10897544 caaaatattcatgtttataccatccaagtggttattattaatgttgctatgattcaagttgttgtatgttgttgtctctgct 10897625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 14693688 - 14693438
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattatatt 97  Q
    |||| ||| ||||| |||||||||||||||||||| |  |||||  ||||||||||| ||      |||||||||||||||||||||| |  ||||||      
T  14693688 agtgacagacaaccttgtttagggttcttgcgatcctcttcgcatatgatgttctgagttggtccttggggtaggaatgaaagttgttgactattataag 14693589  T
Q  98 gtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatata-ttatgttgaaaatgtatgatatagaaaatattattgttt 195  Q
    ||| ||||| |||||||||||||  || ||||||| ||||||||||| |||||| ||| | |||||| |||||||||||||||||||||||||  ||||     
T  14693588 gtgtttcagagagtctgaattaagctg-ttaatgtggttggttaatttgagctatatacaattatgtggaaaatgtatgatatagaaaatattgatgtt- 14693491  T
Q  196 atatctttcaagttgttattattaatgtttctatgttacaagttgttttatgt 248  Q
    ||||| ||||||||||||| ||||||||| ||||| | ||||||||| |||||    
T  14693490 atatcattcaagttgttatgattaatgttgctatgattcaagttgttgtatgt 14693438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 22259449 - 22259205
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatatt 97  Q
    ||||||||||| || | ||||| ||||||||||||||| |||||||||  ||||| |      |||||||||||||||||||||||||||||||| ||||    
T  22259449 agtggcagtcagccttatttagcgttcttgcgatctttttcgcacgtggcgttctaagttggtctttggggtaggaatgaaagttgtttataattgtatt 22259350  T
Q  98 gtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgttta 196  Q
    ||  ||||||||||||||||||| |||| || ||||| | | ||| ||||| | ||||||||||||  | | |||||||||||| ||||||| ||||| |    
T  22259349 gtctttcagtgagtctgaattaatatgaatattgttgctagataatttgagatgcatatattatgtgaatattgtatgatatag-aaatattgttgttca 22259251  T
Q  197 tatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    |||  ||||||||||| || | ||||||  |||||| |||||||||    
T  22259250 tattattcaagttgttgttgtaaatgttgttatgttgcaagttgtt 22259205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 10897137 - 10897273
Alignment:
Q  27 gttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaa 120  Q
    ||||||||||||| ||||||||||||| ||||||      |||||||||| ||| ||||||||||||||||||||||    |||||||||||||||||||    
T  10897137 gttcttgcgatctgtgtcgcacgtgatattctgagttggtctttggggtaagaaggaaagttgtttataattatattagctttcagtgagtctgaattaa 10897236  T
Q  121 aatgattaatgttgttggttaattgagctacatatat 157  Q
     |||| || ||||||||  |||||||| || ||||||    
T  10897237 tatgaatattgttgttgaataattgagatatatatat 10897273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 25141289 - 25141129
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  |||||||||||| |||||| |||| || ||||||||  ||||| ||| ||||||||||||||  | | | ||||||||||    
T  25141289 tgtttataattgtattgtctttcagtgagtctaaattaacatgaatattgttgttgaataatttgagatacatatattatgtgaatattatatgatatag 25141190  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||| |||||||||| ||||| |||||||||||  | ||||||||  |||| |||||||||||    
T  25141189 aaa-tattattgttcatatcattcaagttgttgctgttaatgttgttatgatacaagttgtt 25141129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 259
Target Start/End: Complemental strand, 5985443 - 5985299
Alignment:
Q  117 ttaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttatt 215  Q
    ||||||||||||||||||||||||||| |||  | |||||||||||| ||||| ||||||||||||||||| | ||||| ||||| | ||||||||| ||    
T  5985443 ttaaaatgattaatgttgttggttaatgtgaaattcatatattatgt-gaaaaggtatgatatagaaaataatgttgtt-atatcatccaagttgttgtt 5985346  T
Q  216 atta---atgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||   ||||| ||||||  ||||||||||| ||||| ||||||||    
T  5985345 attattgatgttgctatgtggcaagttgttttctgttgctgtctctg 5985299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 18389036 - 18389119
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||  ||||| ||||||| |||| |||||    
T  18389036 tgttgaaaatgtatgatatggaaattattattgtttatatcattcaagttgttattatcgatgttgctatgttgcaagatgttt 18389119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25045484 - 25045241
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt-----tggggtaggaatgaaagttgtttataattata 95  Q
    |||||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||| ||     |||| |||||||| ||||||||||| |   ||    
T  25045484 ctcagtggcagtca-ccttgtttagggttcttgcgatctttgtcgtacgtgatgttgtgagttgatcttgggttaggaatgtaagttgtttattaagtta 25045386  T
Q  96 ttgtggttcagtgagtctgaattaaaatgattaatg-ttgttggttaattga-gctacatatattatgt--tgaaaatgtatgatatagaaaatattatt 191  Q
    | |  || |||  || |||||| ||| ||||||||| |||||||||  || | | ||  ||||| ||||  |||||||||| ||||| |||| |||||||    
T  25045385 tagacgtacagaaagcctgaatcaaa-tgattaatgattgttggttggtttaagttatttatataatgtgttgaaaatgtaagatatggaaattattatt 25045287  T
Q  192 gtttatatctttcaagttgttattattaatgtttctatgttacaag 237  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||| ||||    
T  25045286 gtttatatcattcaagttgttgttattgatgttgctatgttgcaag 25045241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 6478029 - 6478117
Alignment:
Q  152 atatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    ||||||||||| ||||||| |||||||||||||| |  ||||||||||| ||||||||||| |||||||| || ||||||| |||||||    
T  6478029 atatattatgtggaaaatggatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttg 6478117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 9975265 - 9975146
Alignment:
Q  143 ttgagctacatatat-tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaa-gttg 240  Q
    ||||| ||||||||| ||||| ||||||||||| ||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||  || ||||    
T  9975265 ttgagttacatatatatatgtggaaaatgtatggtatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtaaagttg 9975167  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  9975166 ttgtatgttgttgtctctgct 9975146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 17306824 - 17306705
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| ||||| |||||   ||||||||||||||||||||| | |||||||   ||||||    
T  17306824 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatattg-ttataaaattcaagttgttattattaatgatgctatgttgtgaagttg 17306726  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  17306725 ttgtatgttgttgtctctgct 17306705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 31520439 - 31520371
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaat 221  Q
    |||||||||| |||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  31520439 tatattatgtggaaaatgtatgatatagaaaatatcattgttattatcattcaagttgttattattaat 31520371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 36839511 - 36839392
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   ||||||    
T  36839511 ttgagttacatatatttatgtggaaaatgtatgatatagaaaatagtgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttg 36839413  T
Q  241 ttttatgttgttgtctctgct 261  Q
    |  ||||||||||||||||||    
T  36839412 tcgtatgttgttgtctctgct 36839392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 28653217 - 28653336
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| |||||||||||| |||| | ||||| ||| | ||||||||||||||||||||| | |||||||   ||||||    
T  28653217 ttgagttacatatatttatgtggaaaaggtatgatatagataataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttg 28653315  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  28653316 ttgtatgttgttgtctctgct 28653336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 24515517 - 24515404
Alignment:
Q  149 tacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttac-aagttgttttat 246  Q
    |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | || |||||||||| ||||||| | ||||||| | |||||||| |||    
T  24515517 tacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattgaagttgttatgattaatgatgctatgttgcgaagttgttgtat 24515419  T
Q  247 gttgttgtctctgct 261  Q
    |||||||||||||||    
T  24515418 gttgttgtctctgct 24515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 27485185 - 27485274
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||    
T  27485185 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgtt 27485274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 23969338 - 23969417
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatg 222  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | |||||||||||||||||||||    
T  23969338 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatg 23969417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 5031845 - 5031922
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaa 220  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||||| |||||||||||||||||||    
T  5031845 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaa 5031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 24781555 - 24781644
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| |||||  |||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||    
T  24781555 ttgagttacatatatttatgtggaaaagatatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtt 24781644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 21368121 - 21368050
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
    |||| ||||| ||| |||| ||||||| ||| |||||||||||||||| |||||| ||| ||||||| ||||    
T  21368121 tataatatgtggaagatgtttgatatataaattattattgtttatatcattcaagatgtcattattagtgtt 21368050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 34137235 - 34137202
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    ||||||||||||||||||||||||||||| ||||    
T  34137235 tgtttagggttcttgcgatctttgtcgcatgtga 34137202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6576653 - 6576598
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatc--tttgtcgcacgtgatgtt 56  Q
    ||||||||| ||||| |||||||| ||||||||||   ||||||||||||||||||    
T  6576653 cagtggcagacaaccttgtttaggtttcttgcgattattttgtcgcacgtgatgtt 6576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 136189 - 136435
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||| |||||| || | ||||| ||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||     
T  136189 ctcagtgacagtcatccttatttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttataattac 136288  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    |||||  ||||||||||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||||||  ||| |||||||||||| ||||||| ||||    
T  136289 attgtttttcagtgagtctgaattaatatgattattgtagttggataatttgagatacatatattatgtgaaaattgtatgatatag-aaatattgttgt 136387  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgt 241  Q
    | ||||| ||||||||||| |||||||||||  |||||| ||||||||    
T  136388 tcatatcattcaagttgttgttattaatgttattatgttgcaagttgt 136435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 12240 - 12347
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  | |||||| |||||||||||||||  ||||||||||| ||||| |||||||||||||| || ||||||| |||||||  ||||||||||    
T  12240 tatattatgagggaaatgtgtgatatagaaaatatcgttgtttatatcattcaaattgttattattaatattgctatgttgcaagttg-cttatgttgtt 12338  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  12339 gtccctgct 12347  T

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Target: scaffold0056 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 66491 - 66226
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| ||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||   |    
T  66491 ctcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttataaaagt 66392  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||  |  ||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||| |||| |||| |||||||||||| ||||||| ||||    
T  66391 ataatctttcagtgagtctgaattaatatgattattgttgttggttaatttgagatacatatatgatgtggaaattgtatgatatag-aaatattgttgt 66293  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||| || ||||||||||||||||||||  |||||| ||||||| || |||||||||||| ||||    
T  66292 tcatatcattaaagttgttattattaatgttgttatgttgcaagttg-ttgatgttgttgtctttgct 66226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 11054045 - 11053845
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatta 159  Q
    ||||||||||||||||||||||||||||||   ||| ||  | |||||| ||| || ||| |||| |||||||||||||||||| |||||||||||||||    
T  11054045 ctttggggtaggaatgaaagttgtttataaaggtatagtcttccagtgaatctaaactaatatgactaatgttgttggttaatttgagctacatatatta 11053946  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| || ||||||  ||||||||||||||| ||    
T  11053945 tgtggaaaatgtatgatatagaaaatattgttgtttatatcattcaagttgttattattaatgttgctatattgcaagtt-ctttatgttgttgtctatg 11053847  T
Q  260 ct 261  Q
    ||    
T  11053846 ct 11053845  T

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Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 15139603 - 15139343
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||||||||| ||||||| ||      ||||||||||||||||||||| ||||||| |    
T  15139603 ctcagtggcagtcaaccttgtttagtgctcttgcgatctttgtcgcacgtgacgttctgagttggtttttggggtaggaatgaaagttgtctataattgt 15139504  T
Q  95 attgtggttcagtgagtctgaattaaaatg-attaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattg 192  Q
    |||||  ||||||||||||||||||| ||| | || ||||||||| ||| ||||| ||||||||||||||  | | |||||||||||| ||||||| |||    
T  15139503 attgtctttcagtgagtctgaattaatatgaaatattgttgttggataatttgagatacatatattatgtgaacattgtatgatatag-aaatattgttg 15139405  T
Q  193 tttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    ||||||||  ||||||||||| | ||||||||  |||||| ||||||||| | ||||||||||    
T  15139404 tttatatcaatcaagttgttagtgttaatgttgttatgttgcaagttgttat-tgttgttgtc 15139343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 14219585 - 14219832
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| ||||| | ||||||||||      ||||||||||||||||||||||||||| |||    
T  14219585 ctcagtggcagtcaaccttgtttagggttcttgcgatctctgtcacacgtaacgttctgacttggtctttggggtaggaatgaaagttgtttataaatat 14219684  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||| |||||||||||||||||||| |||| |  ||||||||| ||| ||||| ||||||||||||||  | | |||||||||||| || |||| ||||    
T  14219685 attgttgttcagtgagtctgaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatag-aagtattgttgt 14219783  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| ||||||||||| || ||  ||||  |||||| |||||||||    
T  14219784 tcatatcattcaagttgttgttgttggtgttgttatgttgcaagttgtt 14219832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 19557897 - 19558156
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| |  ||||||||||||||||||||||| |||||||| | |||||||      |||||||||| |||||||||||||||||||||||    
T  19557897 ctcagtggcagtcagcattgtttagggttcttgcgatctttttcgcacgtaacgttctgagttggtctttggggtaagaatgaaagttgtttataattat 19557996  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||| |||| |||||||| |||||| |||| |  ||||||||| ||| ||||| ||||||||||||||  | | |||||||||||| ||||||  ||||    
T  19557997 attgttgttccgtgagtctaaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatag-aaatatagttgt 19558095  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    | ||||| ||||||||||| ||||| |||||  |||||| ||||||||| | ||||||||||    
T  19558096 tcatatcattcaagttgttgttattgatgttgttatgttgcaagttgttat-tgttgttgtc 19558156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 15096257 - 15096504
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| | ||||  |||||||||||||||||||||||||| ||||| | ||      ||||||||||||||||||||||||||||| |    
T  15096257 ctcagtggcagtcaaccttatttaatgttcttgcgatctttgtcgcacgtgacgttcttagttggtccttggggtaggaatgaaagttgtttataattgt 15096356  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    |||||  |||||||||| |||||||| |||| |  ||||||||| ||| ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||    
T  15096357 attgtctttcagtgagtttgaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgt 15096455  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| ||||||||||| || ||||||||  |||||| |||||||||    
T  15096456 tcatatcattcaagttgttgttgttaatgttgttatgttgcaagttgtt 15096504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 15281742 - 15281477
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  ||||  ||||||||||||||||||||||||||||| | |      ||||||| || ||||| |||||||||| ||   |    
T  15281742 ctcagtggcagtcagccttacttagatttcttgcgatctttgtcgcacgtgatgttataagttggtctttgggataagaatggaagttgtttacaaaggt 15281643  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggtta-attgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || |   ||||| ||||||||||| ||||||||||||||||||||||  ||||  |||||||||||||| |||| |||||||||||||||||| | |||     
T  15281642 atagcctttcagagagtctgaatttaaatgattaatgttgttggttattttgaattacatatattatgtggaaagtgtatgatatagaaaataatgttg- 15281544  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||| | ||||||||||||| ||||||| ||||||| |||||||||| ||| |||||||||||||    
T  15281543 ttatatcatccaagttgttatta-taatgttgctatgttgcaagttgtttaatggtgttgtctctgct 15281477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 3289513 - 3289657
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  3289513 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgtta 3289612  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||| | ||| ||||||| ||||||| ||||||||||||||||||    
T  3289613 ttattgacgttgctatgttgcaagttg-tttatgttgttgtctctg 3289657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 13132939 - 13133186
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| | ||||| ||||||||||||||| |||||||||| ||||||| ||      ||||||||||||| |||||||| ||||||||    
T  13132939 ctcagtggcagtcaaccttttttagtgttcttgcgatctttttcgcacgtgacgttctgagttgatccttggggtaggaatggaagttgttcataattat 13133038  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||| ||  |||||||||||||||| |||| ||  |||||||  ||| ||||| ||||||||||||||  | | |||||| ||||  ||||||| ||||    
T  13133039 attgttgtgtagtgagtctgaattaatatgaatatcgttgttgaataatttgagatacatatattatgtgaatattgtatggtata-taaatattgttgt 13133137  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| ||||||||||| || ||||||||  |||| | |||||||||    
T  13133138 tcatatcattcaagttgttgttgttaatgttgttatgatgcaagttgtt 13133186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 16077801 - 16077586
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| ||||||| ||      || ||||||||||||||||||||||||| ||    
T  16077801 ctcagtggcagtcaaccttgtttagtgttcttgagatctttttcgcacgtgacgttctgagttggtatttgtggtaggaatgaaagttgtttataatcat 16077702  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||| ||||||||||| |||||||| |||| |  ||||||||| ||| ||||  ||||| ||||||||  | | |||||||||||| ||||||| ||||    
T  16077701 attgttgttcagtgagtttgaattaatatgaatgttgttgttggataatttgaaatacatgtattatgtgaatattgtatgatatag-aaatattgttgt 16077603  T
Q  194 ttatatctttcaagttg 210  Q
    | ||||| |||||||||    
T  16077602 tcatatcattcaagttg 16077586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 48809102 - 48809330
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    |||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||      ||||||||||||  |||||||| ||||||||    
T  48809102 ctcagtggtagtcaaccttgtttagtgttcttgcgatcttt-tcgcacgtgatgttctgagttggtcattggggtaggaatagaagttgttcataattat 48809200  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||| ||  |||||||||||||||| |||| || || |||||| ||| |||||  |||||||| ||||  | | |||||||||||| ||||||| ||||    
T  48809201 attgttgtgtagtgagtctgaattaatatgaatattgatgttgggtaatttgagacacatatatgatgtgaatattgtatgatatag-aaatattgttgt 48809299  T
Q  194 ttatatctttcaagttgttattattaatgtt 224  Q
    | ||||| |||||||| || | |||||||||    
T  48809300 tcatatcattcaagttattgtgattaatgtt 48809330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 256
Target Start/End: Complemental strand, 4071201 - 4070945
Alignment:
Q  5 gtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattg 98  Q
    |||||||||| || |  |||| |||||||||||||||||||||||| ||||| |||      |||||||||  |||||||||||||||||||   ||| |    
T  4071201 gtggcagtcagccttacttagagttcttgcgatctttgtcgcacgtaatgttatgagttgatctttggggtgagaatgaaagttgtttataaaggtatag 4071102  T
Q  99 tggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgttta- 196  Q
       ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||| ||||||| |||| | |||||  |||| |     
T  4071101 cctttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgaggaaattgtatga-atag-agatattgatgttcat 4071004  T
Q  197 tatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtct 256  Q
    |||| |||||||||||||||| | |  || |||||| ||||||| || ||||||||||||    
T  4071003 tatcattcaagttgttattatcagttgttgtatgttgcaagttg-ttgatgttgttgtct 4070945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 37785001 - 37785196
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatata-ttatg 161  Q
    |||||||||||| |||||||||| |  ||||||||||| ||||| ||| ||||||||||| |||||| || | || | | ||||| |||||||| |||||    
T  37785001 ttggggtaggaaagaaagttgttgaggattatattgtgtttcagagagcctgaattaaaa-gattaaagtagctgttaatttgagttacatatatttatg 37785099  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtctct 258  Q
    | ||||| ||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   |||||||| ||||||| |||||||    
T  37785100 tggaaaaggtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatgttgctgtctct 37785196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 4325378 - 4325271
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||||||||||||||||||||||||||||  |||||  |||| |||||||||||||||||||| |||||||||| |||||||  ||||||| ||    
T  4325378 tatattatgttgaaaatgtatgatatagaaaatatcgttgttattatcattcaagttgttattattaatatttctatgttgcaagttg-cttatgttatt 4325280  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  4325279 gtccctgct 4325271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 8757126 - 8757233
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    ||||||||||  |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||| |    
T  8757126 tatattatgtgaaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgct 8757224  T
Q  253 gtctctgct 261  Q
    |||||||||    
T  8757225 gtctctgct 8757233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 40555473 - 40555580
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||| | ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||| |    
T  40555473 tatattatatggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgct 40555571  T
Q  253 gtctctgct 261  Q
    |||||||||    
T  40555572 gtctctgct 40555580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 258
Target Start/End: Original strand, 17130473 - 17130578
Alignment:
Q  152 atatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgt 251  Q
    ||||||| ||||||||||||||||||| |||| | |||||||||||||| | |||||||||| |||||||||  |||||||  |||||||||||||||||    
T  17130473 atatattgtgttgaaaatgtatgatat-gaaattgttattgtttatatcatccaagttgttagtattaatgtggctatgttgtaagttgttttatgttgt 17130571  T
Q  252 tgtctct 258  Q
    |||||||    
T  17130572 tgtctct 17130578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 36705407 - 36705507
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||  ||| |||||||||||||||| |||||||||||||| || ||||| ||||||| |||| || ||||||||||||||||||    
T  36705407 tgttgaaaatgtatgatatgaaaattattattgtttatatcattcaagttgttattgttcatgttgctatgttgcaagatg-tttatgttgttgtctctg 36705505  T
Q  260 ct 261  Q
    ||    
T  36705506 ct 36705507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 17071026 - 17071109
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||||    
T  17071026 tgttgaaaatgtatgatataaaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatgttt 17071109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 18875617 - 18875759
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatata-ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||||||||| |||  |||||||| |||||| ||||| ||||||||||||||||| | ||| |||||   |||||||||||||||||    
T  18875617 aatgattaatgttgttggttaatgtgaaatacatatatttatgtggaaaaggtatgatatagaaaataatgttg-ttatacaattcaagttgttattatt 18875715  T
Q  219 aatgtttctatgtt-acaagttgttttatgttgttgtctctgct 261  Q
    |||| | |||||||   |||||||| ||||||||||||||||||    
T  18875716 aatgatgctatgttgtgaagttgttgtatgttgttgtctctgct 18875759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 43277517 - 43277659
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||||||||| |||  |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | |||||||||||||||||    
T  43277517 aatgattaatgttgttggttaatgtgaaatacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattatt 43277615  T
Q  219 aatgtttctatgtt-acaagttgttttatgttgttgtctctgct 261  Q
    |||| | |||||||   |||||||| ||||||  ||||||||||    
T  43277616 aatgatgctatgttgtgaagttgttgtatgttactgtctctgct 43277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 832753 - 832858
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  |||||||||||||| |||||||||  || |||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  832753 tatattatgaggaaaatgtatgataaagaaaatatcgttttttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 832851  T
Q  253 gtctctg 259  Q
    |||||||    
T  832852 gtctctg 832858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 1197933 - 1198038
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  |||||||||||||| |||||||||  || |||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  1197933 tatattatgaggaaaatgtatgataaagaaaatatcgttttttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 1198031  T
Q  253 gtctctg 259  Q
    |||||||    
T  1198032 gtctctg 1198038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 12755436 - 12755523
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    ||||| |||| ||||||||||||||||||||||||  ||||||||||  ||||||||||||| |||||| |||||||||| |||||||    
T  12755436 tatatcatgtggaaaatgtatgatatagaaaatatcgttgtttatataattcaagttgttatgattaatatttctatgttgcaagttg 12755523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 14191741 - 14191919
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatg-ttgttggttaattga-gctacatatattatgttgaaaatgtatg 174  Q
    ||||||||||||||  || ||| |||||| ||||||||| |||| |||||||||| ||||| |||| || | | ||  |||||||||  | |||||| ||    
T  14191741 aagttgtttataatattaatgttgttcagagagtctgaaattaagatgattaatgattgttagttagtttaagatatctatattatgagggaaatgtgtg 14191840  T
Q  175 atatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||| || || |||| |||||||  ||||||||||||    
T  14191841 atatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctttgttgcaagttg-cttatgttgttgt 14191919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36705240 - 36705295
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36705240 ctcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgtt 36705295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 255
Target Start/End: Original strand, 13133216 - 13133388
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||| || ||||| ||  ||| ||||| ||||||||||||||  | | ||||||||||||    
T  13133216 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgctgaataatttgagatacatatattatgtgaatattgtatgatatag 13133315  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
     ||||||| ||||| ||||| |||||||||||  | ||||||||  |||| | ||||||||| | ||||||||||    
T  13133316 -aaatattgttgttcatatcattcaagttgttgctgttaatgttgttatgatgcaagttgttat-tgttgttgtc 13133388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 21735137 - 21735322
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatat-- 157  Q
    ||||| |||||||||| |||||||||||||   ||| |   |||||||| ||| || ||| |  ||| |||||||||||||| || |||||  |||||      
T  21735137 ctttgtggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaaactaataaaattgatgttgttggttaacttaagctatttatataa 21735236  T
Q  158 tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    ||||| |||||||||||| |||||||||||  |||||  |||| |||||||||||||||||||| || ||||||| ||||||||||    
T  21735237 tatgtggaaaatgtatgagatagaaaatatcgttgttattatcattcaagttgttattattaatattgctatgttgcaagttgttt 21735322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 33001291 - 33001175
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| |||||||||||||| ||||||||||||||||||||||  | |||||  |||| | |||||| || ||||||| ||| ||||||| |||||||||    
T  33001291 ttgagatacatatattatgt-gaaaatgtatgatatagaaaattatgttgttg-tatcatccaagttattgttattaacgttgctatgttgcaagttgtt 33001194  T
Q  243 ttatgttgttgtctctgct 261  Q
    |||||||| ||||||||||    
T  33001193 ttatgttgctgtctctgct 33001175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 3287276 - 3287164
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||| ||||| |||  |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | |||||||||||||||||    
T  3287276 aatgattaatgttgttgcttaatgtgaaatacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattatt 3287178  T
Q  219 aatgtttctatgtt 232  Q
    |||| | |||||||    
T  3287177 aatgatgctatgtt 3287164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 59157 - 59229
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    |||||||||||||||||||||||| |||||||||||||||| || || ||||||||||| ||||| |||||||    
T  59157 tgttgaaaatgtatgatatagaaattattattgtttatatcatttaaattgttattattgatgttgctatgtt 59229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 46386802 - 46386921
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   ||||||    
T  46386802 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttg 46386900  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||| ||||||||||    
T  46386901 ttgtatgttgctgtctctgct 46386921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 14188947 - 14189125
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatg-ttgttggttaattga-gctacatatattatgttgaaaatgtatg 174  Q
    ||||||||||||||  || ||| |||||| ||||||||| |||| |||||||||| ||||| |||| || | | ||  |||||||||  | |||||| ||    
T  14188947 aagttgtttataatattaatgttgttcagagagtctgaaattaagatgattaatgattgttagttagtttaagatatctatattatgagggaaatgtgtg 14189046  T
Q  175 atatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||| || || ||||  ||||||  ||||||||||||    
T  14189047 atatataaaatatcgttgtttatatctttcaagttgttattattaatattgctttgttgtaagttg-cttatgttgttgt 14189125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 20585693 - 20585574
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgt-tacaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | ||||||    ||||||    
T  20585693 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtcgtgaagttg 20585595  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  20585594 ttgtatgttgttgtctctgct 20585574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 47094387 - 47094293
Alignment:
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||  ||||| ||||||| |||| || ||||||||||||| ||||||    
T  47094387 aaaatgtatgatata-aaattattattgtttatatcattcaagttgttgttatcgatgttgctatgttgcaagatg-tttatgttgttgtttctgct 47094293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 8135757 - 8135836
Alignment:
Q  59 gactttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttgg 138  Q
    |||||||||||||||||||||||||| ||||||| ||||||  | |||||||| |||||||| |||| || |||||||||    
T  8135757 gactttggggtaggaatgaaagttgtatataattgtattgtcttacagtgagtatgaattaatatgaatattgttgttgg 8135836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 13408094 - 13408007
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    |||||||||  ||||||||||||||||||||||||  ||||   |||| |||||||||||||||||||| || ||||||| |||||||    
T  13408094 tatattatgaggaaaatgtatgatatagaaaatatcgttgtaattatcattcaagttgttattattaatattgctatgttgcaagttg 13408007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 12127879 - 12127968
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||    
T  12127879 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatactatgtt 12127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 13699627 - 13699685
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||    
T  13699627 tgttgaaaatgtatgatagggaaattattattgtttatatcattcaagttgttattatt 13699685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 12465975 - 12466094
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||| ||||| | ||| ||||| | ||||||||||||||||||||| |  ||||||   ||||||    
T  12465975 ttgagttacatatatttatgtggaaaatgtatgatatagtaaataatgttg-ttataccattcaagttgttattattaatgatgttatgttgttaagttg 12466073  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||| ||||||||||    
T  12466074 ttgtatgttgctgtctctgct 12466094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 13865116 - 13865200
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaag 237  Q
    |||||||||  ||||||||||||||||||||||||  |||||  |||| || ||||||||||||||||| || ||||||| ||||    
T  13865116 tatattatgaggaaaatgtatgatatagaaaatatcgttgttattatcattgaagttgttattattaatattgctatgttgcaag 13865200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 10660023 - 10660081
Alignment:
Q  185 tattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||||    
T  10660023 tattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatgttt 10660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 11066805 - 11066716
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||||||||||||| ||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||    
T  11066805 ttgagttacatatatttatgtggaaaatgtatgatatggaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtt 11066716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 13148187 - 13148276
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||  ||||| ||||||||||||||||| |||| |||||| | ||||||||||||||||||||| | |||||||    
T  13148187 ttgagttacatatatttatgcggaaaaggtatgatatagaaaataatatt-tttataccattcaagttgttattattaatgatgctatgtt 13148276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 11525374 - 11525491
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt-----ctgactttggggtaggaatgaaagttgtttataattatatt 97  Q
    |||||| || ||||| ||||||||||||||| |||||| ||||||||||| |||      ||||| ||||||||||||||| || | ||||||| || ||    
T  11525374 cagtggtagacaaccttgtttagggttcttgtgatcttcgtcgcacgtgaggttttgagttgactctggggtaggaatgaaggtggattataataatgtt 11525473  T
Q  98 gtggttcagtgagtctga 115  Q
    |  |||||||||||||||    
T  11525474 gatgttcagtgagtctga 11525491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 44374268 - 44374164
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtc 255  Q
    |||||| ||||| ||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| |  ||||||   |||||||| ||||||||||||    
T  44374268 ttatgtggaaaaggtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgttatgttgtgaagttgttgtatgttgttgtc 44374170  T
Q  256 tctgct 261  Q
    | ||||    
T  44374169 tttgct 44374164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 44383133 - 44383029
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtc 255  Q
    |||||| ||||| ||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| |  ||||||   |||||||| ||||||||||||    
T  44383133 ttatgtggaaaaggtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgttatgttgtgaagttgttgtatgttgttgtc 44383035  T
Q  256 tctgct 261  Q
    | ||||    
T  44383034 tttgct 44383029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 11309585 - 11309537
Alignment:
Q  173 tgatatagaaaatattattgtttatatctttcaagttgttattattaat 221  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  11309585 tgatatagaaaatattgttgtttatattattcaagttgttattattaat 11309537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 32434305 - 32434384
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatg 222  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||| |||||||||    
T  32434305 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttgttattaatg 32434384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 16996516 - 16996483
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    ||||||||||||||||||||||||||||||||||    
T  16996516 tgtttagggttcttgcgatctttgtcgcacgtga 16996483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 19282429 - 19282310
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttac-aagttg 240  Q
    ||||| |||||||||| || | |||||  ||| |||||||||||| | ||||| ||| | ||||||||||||||||||| | | |||||||   ||||||    
T  19282429 ttgagttacatatatttatatggaaaagatataatatagaaaataatgttgtt-ataccattcaagttgttattattaacgatgctatgttgtgaagttg 19282331  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  19282330 ttgtatgttgttgtctctgct 19282310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 13892892 - 13892849
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||    
T  13892892 caaccttgtttagggtttttgcgatctttgtcgcacgagatgtt 13892849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 1489952 - 1490056
Alignment:
Q  149 tacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgt 248  Q
    ||||||||||||||  | | ||||||||||||||| |||| ||||| ||||| ||||||||||| || ||||| ||  |||| | ||||||||| | |||    
T  1489952 tacatatattatgtgaatattgtatgatatagaaa-tattgttgttcatatcattcaagttgttgttgttaatattgttatgatgcaagttgttat-tgt 1490049  T
Q  249 tgttgtc 255  Q
    |||||||    
T  1490050 tgttgtc 1490056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 130641 - 130674
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    ||||||||||||||||||||||| ||||||||||    
T  130641 tgtttagggttcttgcgatctttatcgcacgtga 130674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 42462260 - 42462215
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcac 48  Q
    ||||| |||||| || |||||||||||||||| |||||||||||||    
T  42462260 cagtgccagtcagccttgtttagggttcttgcaatctttgtcgcac 42462215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 10659564 - 10659592
Alignment:
Q  28 ttcttgcgatctttgtcgcacgtgatgtt 56  Q
    |||||||||||||||||||||||||||||    
T  10659564 ttcttgcgatctttgtcgcacgtgatgtt 10659592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 12371593 - 12371526
Alignment:
Q  164 gaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||||||||||   || |||||| | ||||||||||||||||||||| | |||||||    
T  12371593 gaaaaagtatgatatagaaaataaagtt-tttataccattcaagttgttattattaatgatgctatgtt 12371526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22000837 - 22000885
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||    
T  22000837 ctcagtggcagtcaaccttgtttagtgtttttgcgtcctttgtcgcacg 22000885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 32160857 - 32160921
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  32160857 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 32160921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 21062007 - 21061743
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |||||||| || || ||||||||||||||| ||||||| |||      ||||||||||||| || |||||||||| ||   |    
T  21062007 ctcagtggcagtcagccttgtttaggattattacgatctttgtcgcacatgatgttatgagttggtctttggggtaggagtggaagttgtttacaaaggt 21061908  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattg-agctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    ||||   ||||| ||||||||||| ||||||| |||||||||||||| ||  |  ||||| |||||||| |||||||| ||||||||||||||||  |||    
T  21061907 attgcctttcagagagtctgaatttaaatgatcaatgttgttggttattttcaattacatttattatgtggaaaatgtttgatatagaaaatattgatgt 21061808  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    ||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  21061807 ttatatcattcaagttgttgttattaatgttgctatgttgcaagttgttttatgttgttgtctct 21061743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 261
Target Start/End: Original strand, 4615703 - 4615903
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatta 159  Q
    |||||||||||||||| |||||||||||||   ||| |    ||||||| ||| || | | || ||| |||||||||||||||| ||| |||||||||||    
T  4615703 ctttggggtaggaatggaagttgtttataaaggtatagcctctcagtgaatctaaactcatataattgatgttgttggttaatttgagttacatatatta 4615802  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||| ||||||||    
T  4615803 tgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgctgtctctg 4615901  T
Q  260 ct 261  Q
    ||    
T  4615902 ct 4615903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 2584902 - 2585046
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  2584902 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgtta 2585001  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||| |||  |||||| ||||||| ||||||||| ||||||||    
T  2585002 ttattaacgttgttatgttgcaagttg-tttatgttgctgtctctg 2585046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 115 - 259
Target Start/End: Complemental strand, 6511935 - 6511791
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  6511935 aattaatataattgatgttgttggttaattcaagctacatatattatgtagaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgtta 6511836  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||| ||| |||| || ||||||| |||||||||||| |||||    
T  6511835 ttattaacgttgctatatttcaagttg-tttatgttgttgcctctg 6511791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 63 - 261
Target Start/End: Complemental strand, 27028148 - 27027950
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgag-ctacatatattatg 161  Q
    |||||||||||||| |||||| ||||||   ||| |   |||||||| ||| || ||| || ||| |||||||||||||||| |  ||| ||||||||||    
T  27028148 ttggggtaggaatggaagttggttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggttaatttaaactatatatattatg 27028049  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | |||||||||||||||||||| |||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||||||| ||||||    
T  27028048 tggaaaatgtatgatatagaaagtatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtttctgct 27027950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 13446862 - 13446669
Alignment:
Q  66 gggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatgttg 164  Q
    |||||||||||||||||| ||||||   ||| |   |||||||| ||| || | | || ||| |||||||||||||||| | ||||||||||||||||      
T  13446862 gggtaggaatgaaagttgattataaaggtatagcctttcagtgaatctaaactgatataattgatgttgttggttaattcaagctacatatattatgtga 13446763  T
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||| ||| ||||||| |||||||  |||||||||||||||||    
T  13446762 aaaatgtatgagatagaaaatatcgttgtttatatcattcgagttgttattattaacgttgctatgttgcaagttg-cttatgttgttgtctctg 13446669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 15448141 - 15448248
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||| |||||||||| |||||||  ||||||||||    
T  15448141 tatattatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagtttttattattaatatttctatgttgcaagttg-cttatgttgtt 15448239  T
Q  253 gtctctgct 261  Q
    |||||||||    
T  15448240 gtctctgct 15448248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 261
Target Start/End: Original strand, 14933080 - 14933278
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   ||| |   |||||||| ||| |  ||| || ||| |||||||||||||||| | |||| |||| |||||    
T  14933080 ttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaatataattgatgttgttggttaatttaagctatatatgttatg 14933179  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||| || ||||||| |||||||  |||||||| ||| ||||||    
T  14933180 tggaaaatgtatgatatagaaaatatcgttgtttacatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgctgtttctgct 14933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 9871305 - 9871405
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||||| |||| || ||||||||||||| ||||    
T  9871305 tgttgaaaatgtatgatatagaaattattattgtttatatcagtcaagttgttattattgatgtttctatgttgcaagatg-tttatgttgttgtttctg 9871403  T
Q  260 ct 261  Q
    ||    
T  9871404 ct 9871405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 20899399 - 20899594
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    ||||||||||||||||||||||||||||   ||      |||||||| ||| |  ||| || ||| |||||||||||||||| | |||| ||||||||||    
T  20899399 ttggggtaggaatgaaagttgtttataaaggtacaacttttcagtgaatctaagctaatataattgatgttgttggttaatttaagctatatatattatg 20899498  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    | |||||||||||||||||||||| |  ||||||||||| ||||||||||| |||||||| ||  |||||| |||||||  ||||||||||||||||    
T  20899499 tggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgttatgttgcaagttg-cttatgttgttgtctct 20899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 261
Target Start/End: Original strand, 14942285 - 14942484
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctac-atatattat 160  Q
    |||||||||||||| |||||||||||||   ||| |   |||||||| ||| |  ||| || ||| |||||||||||||||| | ||||  |||| ||||    
T  14942285 ttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaatataattgatgttgttggttaatttaagctaatatatgttat 14942384  T
Q  161 gttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgc 260  Q
    || ||||||||||||| ||||||||||  ||||||| ||| |||||||||||||||||||| || ||||||| |||||||  |||||||||||| |||||    
T  14942385 gtggaaaatgtatgatctagaaaatatcgttgtttacatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtttctgc 14942483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 9638320 - 9638226
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||| | ||||||||||    
T  9638320 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatgttat-tgttgttgtc 9638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 37018958 - 37018816
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||||||||| |||  |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | |||||||||||||||||    
T  37018958 aatgattaatgttgttggttaatgtgaaatacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattatt 37018860  T
Q  219 aatgtttctatgttac-aagttgttttatgttgttgtctctgct 261  Q
    |||| | |||||||   |||||||| ||||||||||||||||||    
T  37018859 aatgatgctatgttgtgaagttgttgtatgttgttgtctctgct 37018816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 14630075 - 14629915
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||| | ||||||  ||||||||||||||||||| |||| || ||||||||  ||||| ||| ||||||||||||||  | | ||||||||||||    
T  14630075 tgtttataaatgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 14629976  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||| |||||||||||||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  14629975 aaa-tattattgtttatatcattcaagttgttcctgttaatgttgttatgatgcaagttgtt 14629915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 51992836 - 51992736
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||| || ||||| ||||||| |||| || ||||||||| ||||||||    
T  51992836 tgttgaaaatgtatgatatggaaattattattgtttatatcattcaagttgttattgttgatgttgctatgttgcaagatg-tttatgttgctgtctctg 51992738  T
Q  260 ct 261  Q
    ||    
T  51992737 ct 51992736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 253
Target Start/End: Complemental strand, 18230074 - 18229880
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatat-- 157  Q
    ||||||||||||||||||||||||||||||   ||| |   |||||||| ||| || ||| || ||| |||||||||||||| || |||||  ||||       
T  18230074 ctttggggtaggaatgaaagttgtttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggttaacttaagctatttataaaa 18229975  T
Q  158 tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttg 253  Q
    ||||| |||||||||||| |||||||||||  |||||  |||| |||||||||||| ||||||| || ||||||| ||||||| ||||||||||||    
T  18229974 tatgtggaaaatgtatgagatagaaaatatcgttgttattatcattcaagttgttaatattaatattgctatgttgcaagttg-tttatgttgttg 18229880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 19435469 - 19435611
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatata-ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||||||||| |||  |||||||| |||||| ||||| ||||||||||||||| | | ||| ||||| | |||||||||||||||||    
T  19435469 aatgattaatgttgttggttaatgtgaaatacatatatttatgtggaaaaggtatgatatagaaaacaatgttg-ttataccattcaagttgttattatt 19435567  T
Q  219 aatgtttctatgtt-acaagttgttttatgttgttgtctctgct 261  Q
    |||| | |||||||   |||||||| ||||||||||||||||||    
T  19435568 aatgatgctatgttgtgaagttgttgtatgttgttgtctctgct 19435611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 16026749 - 16026924
Alignment:
Q  84 tttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaa 182  Q
    ||||||||| |||||   ||||||||||||||||||| |||| || ||||||||  ||| ||||| ||||||||||||||  | | ||| |||||||| |    
T  16026749 tttataattgtattgcctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtgtgatatag-a 16026847  T
Q  183 aatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||| ||||| ||||| ||||||||| |||| ||||||||  |||| | |||||||  |||||||||||||| ||||    
T  16026848 aatattgttgttcatatcattcaagttgctattgttaatgttgttatgatgcaagttg--ttatgttgttgtctttgct 16026924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 16997849 - 16997745
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtc 255  Q
    |||||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   |||||||| ||||||||||||    
T  16997849 ttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatgttgttgtc 16997751  T
Q  256 tctgct 261  Q
    ||||||    
T  16997750 tctgct 16997745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 25090990 - 25090911
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatg 222  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||    
T  25090990 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttatatcattcaagttgttattattaatg 25090911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 32467046 - 32467118
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||| |||| |||| |||||| |||||||    
T  32467046 tgttgaaaacgtatgatatggaaaatattattgtttatatcattcaagctgttgttatcaatgttgctatgtt 32467118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32466880 - 32466935
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  32466880 ctcagtggcagtcaaccttgtgtagggttcttgctatctttgtcgcacgtgatgtt 32466935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 42875136 - 42875019
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||   ||||||    
T  42875136 ttgagttacatatatttatgtggaaaaagtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttg 42875038  T
Q  241 ttttatgttgttgtctctg 259  Q
    || ||||||| ||||||||    
T  42875037 ttgtatgttgctgtctctg 42875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 50160475 - 50160331
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    |||| ||||||| |||| ||||||||||| | ||||||||||||||||| |||||| ||| ||      |||||||||||||| |||||||||| ||  |    
T  50160475 ctcattggcagt-aaccttgtttagggttttggcgatctttgtcgcacgagatgttatgagttggtccttggggtaggaatgatagttgtttatgatatt 50160377  T
Q  95 attgtggttcagtgagtctgaattaaaatga-ttaatgttgttggt 139  Q
    | ||| |||||| ||||||||||||| |||| || |||||||||||    
T  50160376 aatgttgttcagagagtctgaattaagatgattttatgttgttggt 50160331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 20874 - 20774
Alignment:
Q  161 gttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgc 260  Q
    |||||||||||||||||| |||| | ||| |||||||||| | |||||||||| ||||||| |  ||||| |  |||||| ||||||||| |||||||||    
T  20874 gttgaaaatgtatgatatggaaattgttagtgtttatatcatccaagttgttagtattaatctggctatgatgtaagttgctttatgttgctgtctctgc 20775  T
Q  261 t 261  Q
    |    
T  20774 t 20774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 3485248 - 3485134
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || | ||||| ||| | | ||||| ||||||||||||||| ||||| | |||||||||    
T  3485248 ttgagatacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-ataccatccaagtggttattattaatgttgctatgattcaagttgtt 3485151  T
Q  243 ttatgttgttgtctctg 259  Q
     ||||||||||||||||    
T  3485150 gtatgttgttgtctctg 3485134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 9638211 - 9638080
Alignment:
Q  81 ttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatata 179  Q
    |||| ||||||| ||||||  |||| |||||||||||||| |||| |  ||||||||  ||||| ||| ||||||||||||||  | | |||||||||||    
T  9638211 ttgtgtataattgtattgtctttcaatgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 9638112  T
Q  180 gaaaatattattgtttatatctttcaagttgtt 212  Q
    | ||||||| ||||| ||||| |||||||||||    
T  9638111 g-aaatattgttgttcatatcattcaagttgtt 9638080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51993002 - 51992911
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgact-----ttggggtaggaatgaaagttgtttat 88  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||| |     ||||| |||||||| |||||||||||    
T  51993002 ctcagtggcagtca-ccttgtttagggttcttgtgatctttgtcgcacgtgatgttgtgagttgatcttgggttaggaatggaagttgtttat 51992911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 15612298 - 15612227
Alignment:
Q  152 atatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgt 223  Q
    ||||||| ||||||||||||||||||| |||| | |||||||||||||| | ||||||| || |||||||||    
T  15612298 atatattgtgttgaaaatgtatgatatggaaattgttattgtttatatcatccaagttgctagtattaatgt 15612227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 49547986 - 49548060
Alignment:
Q  184 atattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||| ||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||| ||||||||| ||||||||    
T  49547986 atattcttgtttatatcattcgagttgttattattaacgttgctatgttgcaagttg-tttatgttgctgtctctg 49548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 10704808 - 10704719
Alignment:
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    |||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||| ||  |||||| ||||||| ||| ||||||||||    
T  10704808 aaaatgtatggtataaaaaatatcgttgtttatataattcaagttgttattattaatattgttatgttgcaagttgcttt-tgttgttgtc 10704719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 10918578 - 10918489
Alignment:
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    |||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||| ||  |||||| ||||||| ||| ||||||||||    
T  10918578 aaaatgtatggtataaaaaatatcgttgtttatataattcaagttgttattattaatattgttatgttgcaagttgcttt-tgttgttgtc 10918489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 14548963 - 14548846
Alignment:
Q  143 ttgagctacatatat-tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| |  ||||||   ||||||    
T  14548963 ttgagttacatatatgtatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgttatgttgtgaagttg 14548865  T
Q  241 ttttatgttgttgtctctg 259  Q
    || ||||||| ||||||||    
T  14548864 ttgtatgttgctgtctctg 14548846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 11425292 - 11425172
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaa-tattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagtt 239  Q
    ||||| |||||||||| |||| ||| | ||||||||||||||| || ||||||| ||||| |||| |||||||||||||||| | |||||||   |||||    
T  11425292 ttgagttacatatatttatgtggaataggtatgatatagaaaaataatattgtt-atatcattcatgttgttattattaatgatgctatgttgtgaagtt 11425194  T
Q  240 gttttatgttgttgtctctgct 261  Q
    | | ||||||||||||||||||    
T  11425193 gatgtatgttgttgtctctgct 11425172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 19609646 - 19609572
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    |||||| ||||||||||||||||||||||| | ||| ||| | | ||||||||||||||||||||| | |||||||    
T  19609646 ttatgtggaaaatgtatgatatagaaaataatgttg-ttaaaccattcaagttgttattattaatgatgctatgtt 19609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 33243971 - 33244089
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgt 241  Q
    ||||| |||||||||| |||  | || ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||   ||||| |    
T  33243971 ttgagatacatatattgtgtgaataaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttat 33244069  T
Q  242 tttatgttgttgtctctgct 261  Q
    | ||||||| ||||||||||    
T  33244070 tgtatgttgatgtctctgct 33244089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 19734568 - 19734514
Alignment:
Q  205 aagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||| ||||||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  19734568 aagtggttattattaatgttgctatgattcaagttgttgtatgttgttgtctctg 19734514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 19738557 - 19738511
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  19738557 cagtgacagacaaccttgtttagggttcttgcgatctttgtcgcacg 19738511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 26050285 - 26050330
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcac 48  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  26050285 cagtgtcagacaaccttgtttagggttcttgcgatctttgtcgcac 26050330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 40907382 - 40907329
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||| ||| ||||| ||||||||||||||| ||||||||||||||| ||||||    
T  40907382 cagtgtcagacaaccttgtttagggttcttgtgatctttgtcgcacgagatgtt 40907329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 10357151 - 10357270
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| | || |||||  |||||||||||||||| | ||||| ||| | ||||||||||||||||||||| |  ||||||   ||||||    
T  10357151 ttgagttacatatatttacgtagaaaagatatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgttatgttgtgaagttg 10357249  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||| ||||    
T  10357250 ttgtatgttgttgtctttgct 10357270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 15365370 - 15365334
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15365370 caaccttgtttagggttcttgcgatctttgtcgcacg 15365334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 46643141 - 46643090
Alignment:
Q  6 tggcagtcaaccatgtttagggttcttgcgatc-tttgtcgcacgtgatgtt 56  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  46643141 tggcagacaaccttgtttaggtttcttgcgatcttttgtcgcacgtgatgtt 46643090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 27996222 - 27996177
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcac 48  Q
    ||||| ||| ||||| |||||||||||||||| |||||||||||||    
T  27996222 cagtgacagacaaccttgtttagggttcttgcaatctttgtcgcac 27996177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 32306821 - 32306858
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  32306821 tgtttagggttcttgcgatttttgtcgcacgagatgtt 32306858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 53631148 - 53631216
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  53631148 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 53631216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 15612431 - 15612399
Alignment:
Q  28 ttcttgcgatctttgtcgcacgtgatgttctga 60  Q
    ||||||||||||||||||||||||||||| |||    
T  15612431 ttcttgcgatctttgtcgcacgtgatgttatga 15612399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 28385640 - 28385576
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||| || |||  ||||| |||||| || |||| ||||||||||||||||||||    
T  28385640 aagttgtttataattttaatgttcttcagagagtctaaaattaagatgattaatgttgttggtta 28385576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 255
Target Start/End: Complemental strand, 837 - 583
Alignment:
Q  6 tggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgt 99  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| | |||||||      |||||||||||||||||||||||||||| ||||| ||||    
T  837 tggcagtcaaccttgtttagggttcttgcgatctttttcgcacgtaacgttctgagttggtctttggggtaggaatgaaagttgtttattattatgttgt 738  T
Q  100 ggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttata 198  Q
     |||||||||||||||||||  |||| |  ||||||||| ||| ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| |||    
T  737 tgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcata 639  T
Q  199 tctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    || ||||||||||| || || |||||  |||||||||||||||| | ||||||||||    
T  638 tcattcaagttgttgttgttgatgttgttatgttacaagttgttat-tgttgttgtc 583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 127366 - 127614
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| |||||||||||||||||||||||| ||||| ||| ||      |||| ||||||||||||||||||||||   |    
T  127366 ctcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtaatgttatgagttggtccttgggataggaatgaaagttgtttataaaggt 127465  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || |   |||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  127466 atagcctttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatatagaaaatattgttgt 127565  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| |||||||||||||||| | |  || |||||| |||||||||    
T  127566 tcatatcattcaagttgttattatcagttgttgtatgttgcaagttgtt 127614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 397973 - 397740
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt-----tggggtaggaatgaaagttgttta-taattatatt 97  Q
    |||||||||||| | | |||||||||||||||||  ||||||||||||||||| ||| ||     |||| |||||||||||| |||||| ||| | |||     
T  397973 agtggcagtcaaacttctttagggttcttgcgatacttgtcgcacgtgatgttgtgagttgattatgggataggaatgaaagctgtttaataagt-tata 397875  T
Q  98 gtggttcagtgagtctgaattaaaatgattaatg-ttgttggttaatt---gagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    |   ||||| ||| |||||||||| ||||||||| |||||||||| ||   ||  |  ||||| | ||||| |||||||||||||  ||| |||||||||    
T  397874 gactttcagagagcctgaattaaa-tgattaatgattgttggttagttcaagatatttatataatgtgttggaaatgtatgatatgaaaattattattgt 397776  T
Q  194 ttatatctttcaagttgttattattaatgtttctat 229  Q
    ||||||| |||||||||||||| || ||||| ||||    
T  397775 ttatatcattcaagttgttattcttgatgttgctat 397740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13179622 - 13179374
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| |||||||||||||||||||||||| ||||| ||| ||      |||| ||||||||||||||||||||||   |    
T  13179622 ctcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtaatgttatgagttggtccttgggataggaatgaaagttgtttataaaggt 13179523  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || |   |||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  13179522 atagcctttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatatagaaaatattgttgt 13179423  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| |||||||||||||||| | |  || |||||| |||||||||    
T  13179422 tcatatcattcaagttgttattatcagttgttgtatgttgcaagttgtt 13179374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 20417493 - 20417293
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatta 159  Q
    ||||||||||||  || ||||||||||||| | ||| |   |||||||| ||| || ||| ||||||||||||||||||||||| |||||||||||||||    
T  20417493 ctttggggtagggttggaagttgtttataaatgtatagcctttcagtgaatctaaactaatatgattaatgttgttggttaatttgagctacatatatta 20417394  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||| |||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| ||  |||||| ||||||| ||||||||||||||||||    
T  20417393 tgtggaaaatgtatgatataaaagatattgttgtttatatcattcaagttgttattattaatattgatatgttgcaagttg-tttatgttgttgtctctg 20417295  T
Q  260 ct 261  Q
    ||    
T  20417294 ct 20417293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 261
Target Start/End: Original strand, 45531256 - 45531455
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatata-tta 159  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| || |||| | | ||||| |||||||| |||    
T  45531256 ctttggggtaggaatgaaagttgttcataattatattgtgtttcagtgagtctgaatt-aaatgattaa-gtagttgttaatttgagttacatatattta 45531353  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtctct 258  Q
    ||| |||||||||||||||| || ||| | ||| ||||| | ||||||||||||||||||||| |  ||||||   |||||||| |||||| ||||||||    
T  45531354 tgtggaaaatgtatgatataaaagataatgttg-ttataccattcaagttgttattattaatgatgttatgttgtgaagttgttgtatgttattgtctct 45531452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 261
Target Start/End: Original strand, 23395751 - 23395897
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||| ||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  23395751 aattaatataattgatgttgttcgttaattcaagctacatatattatgtggaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgtta 23395850  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||| |||  ||| || ||||||| ||||||||||||||||||||    
T  23395851 ttattaacgttgttatattgcaagttg-tttatgttgttgtctctgct 23395897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 14818439 - 14818239
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatatta 159  Q
    ||||||||||||||||  ||||||||||||   ||| |   |||||||| ||| || ||| || ||| |||||||||||||||| | |||| ||||||||    
T  14818439 ctttggggtaggaatgggagttgtttataaaggtatagcttttcagtgaatctaaactaatataattgatgttgttggttaatttaagctatatatatta 14818340  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || || | || |||||||  |||||||| ||||||||    
T  14818339 tgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctgtattgcaagttg-cttatgttgctgtctctg 14818241  T
Q  260 ct 261  Q
    ||    
T  14818240 ct 14818239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 11563078 - 11562882
Alignment:
Q  22 ttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctga 115  Q
    |||| |||||||||||||||||||||||||| |||||||      |||||||||||||||||||||||||||||||  ||||    ||||||||||||||    
T  11563078 ttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtaggaatgaaagttgtttataatggtattagctttcagtgagtctga 11562979  T
Q  116 attaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| |||| || ||||||||  ||| ||||| ||||||||||||||  | | || ||||||||| ||||||| || || ||||| |||||||||||    
T  11562978 attaatatgaatattgttgttgactaatttgagatacatatattatgtgaatattgaatgatatag-aaatattgttattcatatcattcaagttgtt 11562882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 13523141 - 13523248
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| ||||||| ||||||||| |    
T  13523141 tatattatgaggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-tttatgttgct 13523239  T
Q  253 gtctctgct 261  Q
    |||||||||    
T  13523240 gtctctgct 13523248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 3394733 - 3394839
Alignment:
Q  154 atattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttg 253  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||||||    
T  3394733 atattatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttg 3394831  T
Q  254 tctctgct 261  Q
    | ||||||    
T  3394832 tttctgct 3394839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 17548242 - 17548368
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||| ||  ||||||||||| |||||||||||     
T  17548242 aattaatataattgatgttgttggttaattcaagctatatatattatgtggaaaatgtatgatatagaaaaaatcgttgtttatatcattcaagttgttg 17548341  T
Q  214 ttattaatgtttctatgttacaagttg 240  Q
    |||||||| || ||||||| |||||||    
T  17548342 ttattaatattgctatgttgcaagttg 17548368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 240
Target Start/End: Original strand, 52338604 - 52338782
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   ||| |   |||||||| ||| |  ||| || ||| |||||||||||||||| | |||| ||||||||||    
T  52338604 ttggggtaggaatggaagttgtttataaaggtatagcttttcagtgaatctaagctaatataattgatgttgttggttaatttaagctatatatattatg 52338703  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    | |||||||||||||||||||||| |  || |||||||| ||||||||||| |||||||| || ||||||| |||||||    
T  52338704 tggaaaatgtatgatatagaaaatgtcgttatttatatcattcaagttgttgttattaatattgctatgttgcaagttg 52338782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 10550615 - 10550483
Alignment:
Q  129 atgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttct 227  Q
    |||||||||||||||| | |||| |||| |||||| |||||||||||||||||||| |||  ||||||||||| |||||||||||||||||||| || ||    
T  10550615 atgttgttggttaatttaagctatatattttatgtggaaaatgtatgatatagaaattatcgttgtttatatcattcaagttgttattattaatattgct 10550516  T
Q  228 atgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| |||||||  |||||||| ||||| ||||    
T  10550515 atgttgcaagttg-cttatgttgctgtctttgct 10550483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 13520511 - 13520618
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||| || ||||||| |||||||  ||||||||||    
T  13520511 tatattatgaggaaaatgtatgatatagaaaatatcgttgtttatatcattcaaattgttattattaatattgctatgttgcaagttg-cttatgttgtt 13520609  T
Q  253 gtctctgct 261  Q
    |||||||||    
T  13520610 gtctctgct 13520618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 6158710 - 6158627
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||||    
T  6158710 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatgttt 6158627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 14642289 - 14642372
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||||    
T  14642289 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatgttt 14642372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 11192330 - 11192170
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||| || ||||||||  ||| ||||| ||||||||||||||  | | ||||||||||||    
T  11192330 tgtttataattttattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 11192231  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
     ||||||||||||| ||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  11192230 -aaatattattgttcatatcattcaagttgttgctgttaatgttgttatgatgcaagttgtt 11192170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 17258806 - 17259041
Alignment:
Q  10 agtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattatattgtggtt 103  Q
    |||||||  ||||||| ||||||||||||||| || ||||||| ||||||| ||      ||||||||||||| |||||||| |||||||||| ||  |     
T  17258806 agtcaactttgtttagtgttcttgcgatctttttcacacgtgaggttctgagttggtccttggggtaggaatgtaagttgttcataattatatagttttg 17258905  T
Q  104 cagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctt 202  Q
     |||||||||||||||| |||| || || |||| | ||| || || ||||| ||||||||  | | |||||||||||| ||||||| ||||| ||||| |    
T  17258906 tagtgagtctgaattaatatgaatattgatgttagataatttaagatacatgtattatgtgaatattgtatgatatag-aaatattgttgttcatatcat 17259004  T
Q  203 tcaagttgttattattaatgtttctatgttacaagtt 239  Q
    ||||||| || | ||||||||| ||||| ||||||||    
T  17259005 tcaagttattgtgattaatgttgctatgctacaagtt 17259041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 42324960 - 42325060
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||| ||| ||||    
T  42324960 tgttgaaaatgtatgatatggaaattattattgtttatatcattcaagttgttattattcatgttgctatgttgcaagatg-tttatgttgatgtttctg 42325058  T
Q  260 ct 261  Q
    ||    
T  42325059 ct 42325060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 16044824 - 16044661
Alignment:
Q  27 gttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaa 120  Q
    |||||||||||| ||||||||||||||||| |||      ||||||||||||||||||||||||||| ||   |||     ||||| |||| ||||||||    
T  16044824 gttcttgcgatcattgtcgcacgtgatgttatgaattggtctttggggtaggaatgaaagttgtttacaaaggtataacctttcagagagtttgaattaa 16044725  T
Q  121 aatgattaatgttgttggtta-attgagctacatatattatgttgaaaatgtatgatatagaaa 183  Q
    |||||||||||||||||||||  ||||  |||||||||||||  |||| |||||||||||||||    
T  16044724 aatgattaatgttgttggttattttgaaatacatatattatgcggaaagtgtatgatatagaaa 16044661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 16059684 - 16059521
Alignment:
Q  27 gttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaa 120  Q
    |||||||||||| ||||||||||||||||| |||      |||||||||||||||| |||||||||| ||   |||     ||||| |||| ||||||||    
T  16059684 gttcttgcgatcattgtcgcacgtgatgttatgagttggtctttggggtaggaatggaagttgtttacaaaggtataacctttcagagagtttgaattaa 16059585  T
Q  121 aatgattaatgttgttggtta-attgagctacatatattatgttgaaaatgtatgatatagaaa 183  Q
    |||||||||||||||||||||  ||||  |||||||||||||| |||| |||||||||||||||    
T  16059584 aatgattaatgttgttggttattttgaaatacatatattatgtggaaagtgtatgatatagaaa 16059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 18367488 - 18367595
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||| ||  |||||| |||||||  |||||||| |    
T  18367488 tatattatgtggaaaatgtatgatattgaaaatatcgttgtttatatcattcaagttgttattattaatattgttatgttgcaagttg-cttatgttgct 18367586  T
Q  253 gtctctgct 261  Q
    |||||||||    
T  18367587 gtctctgct 18367595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 41173086 - 41173205
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  41173086 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatgctatgttgtgaagttg 41173184  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  41173185 ttgtatgttgttgtctctgct 41173205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 37038131 - 37038048
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||| ||||||| |||| |||||    
T  37038131 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaaattgttattattgatgttgctatgttgcaagatgttt 37038048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 10563023 - 10562921
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtctct 258  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| |||||| | |||||||   |||||||| ||||||||| |||||    
T  10563023 tgttgaaaatgtatgatataaaaattattattgtttatatcgttcaagttgttatttttaatgatgctatgttgtgaagttgttgtatgttgttatctct 10562924  T
Q  259 gct 261  Q
    |||    
T  10562923 gct 10562921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 14153162 - 14153274
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    ||||||||||||||||||||||| |||  |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  14153162 aatgattaatgttgttggttaatgtgaaatacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-atatcattcaagttgttattatt 14153260  T
Q  219 aatgtttctatgtt 232  Q
    |||| | |||||||    
T  14153261 aatgatgctatgtt 14153274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 35065295 - 35065414
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  35065295 ttgagttacatatatttatgtggaaaaagtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatgctatgttgtgaagttg 35065393  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  35065394 ttgtatgttgttgtctctgct 35065414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 11562818 - 11562676
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||| || ||||||||  ||||| ||| ||||||||||||||  | | ||||||||||||    
T  11562818 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataattagagatacatatattatgtgaatattgtatgatatag 11562719  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
     ||||||| ||||| ||||| ||||| ||||| || ||||||||    
T  11562718 -aaatattgttgttcatatcattcaaattgttgttgttaatgtt 11562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12512390 - 12512445
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12512390 ctcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgtt 12512445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 16728696 - 16728503
Alignment:
Q  66 gggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatatatt-atgttg 164  Q
    |||||| || |||||||||| |  ||||||||||   |||| ||| ||||||||||| |||||| || |||| | | ||||| |||||||||| |||| |    
T  16728696 gggtagaaaagaaagttgttgaggattatattgtttatcagagagcctgaattaaaa-gattaaagtagttgttaatttgagttacatatatttatgtgg 16728598  T
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||| | | ||| ||||| | ||||||||||||||||||||| |  ||||||   |||||||| ||||||||||||||||    
T  16728597 aaaatgtatgatatagaaaacaatgttg-ttataccattcaagttgttattattaatgatgatatgttgtgaagttgttgtatgttgttgtctctg 16728503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 11886410 - 11886511
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||| |||||||||| |||| |||||||||||||||| |  ||||||||| |||||| ||  ||||||| ||||||| ||||||||| ||||||||    
T  11886410 tgttgaaattgtatgatatggaaattattattgtttatatcatctaagttgttagtattaacgtggctatgttgcaagttgctttatgttgctgtctctg 11886509  T
Q  260 ct 261  Q
    ||    
T  11886510 ct 11886511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 52213206 - 52213314
Alignment:
Q  152 atatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgt 251  Q
    ||||||||||| |||||||||| |||||||||||||  ||||||||||| ||||| ||||||||||| | ||| |||| || |||||||  |||||||||    
T  52213206 atatattatgtggaaaatgtattatatagaaaatatcgttgtttatatcattcaaattgttattattgaagttgctattttgcaagttg-cttatgttgt 52213304  T
Q  252 tgtctctgct 261  Q
    ||| ||||||    
T  52213305 tgtttctgct 52213314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 5206369 - 5206488
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   || |||    
T  5206369 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaaattg 5206467  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  5206468 ttgtatgttgttgtctctgct 5206488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 12512557 - 12512640
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    ||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||| || ||||| ||||||| |||| |||||    
T  12512557 tgttgaaaatgaatgatatggaaattattattgtttatatcattcaagttgttattgttgatgttgctatgttgcaagatgttt 12512640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14250695 - 14250750
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  14250695 ctcagtggcagtcaaccttgtttaaggttcttgcgatctttgtcgcacgtgatgtt 14250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 50348798 - 50348910
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatt 218  Q
    |||||||| |||||||||||||| |||  ||||| |||| |||| ||||| ||||||||||||||||| ||||| ||||| | |||||||||||||||||    
T  50348798 aatgattattgttgttggttaatgtgaaatacatgtatttatgtggaaaaggtatgatatagaaaataatattg-ttataccattcaagttgttattatt 50348896  T
Q  219 aatgtttctatgtt 232  Q
    |||| | |||||||    
T  50348897 aatgatgctatgtt 50348910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 179437 - 179544
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    ||||||||||  ||||||| |||||||||||||||  |||||  |||| |||||||||||| ||||||| || ||||||| |||||||  ||||||||||    
T  179437 tatattatgtgcaaaatgtttgatatagaaaatatcgttgttattatcattcaagttgttactattaatattgctatgttgcaagttg-cttatgttgtt 179535  T
Q  253 gtctctgct 261  Q
    || ||||||    
T  179536 gtttctgct 179544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 14250857 - 14250954
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| |||| |||||||||   |||  ||||||||||||||||| ||||| ||||||| |||| || ||||||||| ||||||||    
T  14250857 tgttgaaaatgtatgatatggaaattattattgt---tataattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgctgtctctg 14250952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 19884238 - 19884355
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtta-caagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | || |||||| | ||||||||||||||||||||| |  |||||||   |||||    
T  19884238 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgtt-tttataccattcaagttgttattattaatgatgttatgttatggagttg 19884336  T
Q  241 ttttatgttgttgtctctg 259  Q
    || ||||||| ||||||||    
T  19884337 ttgtatgttgatgtctctg 19884355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 44273811 - 44273722
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||    
T  44273811 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgtt 44273722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 6819431 - 6819367
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattat 217  Q
    |||||||||| ||||||||||||||||||||||||  |||||  |||| ||||||||||||||||    
T  6819431 tatattatgtggaaaatgtatgatatagaaaatatcgttgttattatcattcaagttgttattat 6819367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 11258804 - 11258725
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatg 222  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | |||||||||||||||||||||    
T  11258804 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatg 11258725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 11850346 - 11850478
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||            ||| ||||||||||| ||| ||||||||    
T  11850346 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtat------------attgttgtttatatcattctagttgtta 11850433  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||| ||| ||||||| ||||||| ||||||||| ||||||||    
T  11850434 ttattaacgttgctatgttgcaagttg-tttatgttgctgtctctg 11850478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 35353930 - 35353819
Alignment:
Q  149 tacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttat 246  Q
    |||||||||| |||| ||||||||||| ||||||||||| | ||| ||||| |||| |||||||||||||||||  | |||||||   |||||||| |||    
T  35353930 tacatatatttatgtggaaaatgtatgttatagaaaataatgttg-ttataccttttaagttgttattattaattatgctatgttgtgaagttgttgtat 35353832  T
Q  247 gttgttgtctctg 259  Q
    |||||||||||||    
T  35353831 gttgttgtctctg 35353819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 3803170 - 3803096
Alignment:
Q  184 atattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||| ||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||| ||||||||| ||||||||    
T  3803170 atattgttgtttatatcattcgagttgttattattaacgttgctatgttgcaagttg-tttatgttgctgtctctg 3803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 17693405 - 17693291
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | |||  |||| | ||||||||||||||||||||| | |||||||   ||||||    
T  17693405 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-atataccattcaagttgttattattaatgatgctatgttgtgaagttg 17693307  T
Q  241 ttttatgttgttgtct 256  Q
    || ||||||| |||||    
T  17693306 ttgtatgttgatgtct 17693291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 22307298 - 22307387
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||    
T  22307298 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtt 22307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11886243 - 11886335
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgact-----ttggggtaggaatgaaagttgtttat 88  Q
    |||||||| |||||||| |||||||||| |||||||| || ||||||||||||||| ||| |     ||||| |||||||| |||||||||||    
T  11886243 ctcagtggtagtcaaccttgtttagggtccttgcgatgttcgtcgcacgtgatgttgtgagttgatcttgggataggaatggaagttgtttat 11886335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 54520772 - 54520701
Alignment:
Q  184 atattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtct 256  Q
    ||||| ||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||| ||||||||| |||||    
T  54520772 atattcttgtttatatcattcgagttgttattattaacgttgctatgttgcaagttg-tttatgttgctgtct 54520701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 2842192 - 2842266
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    |||||| ||||| ||||||||||||||||| | ||||| ||||| |||||||| |||||||||||| | |||||||    
T  2842192 ttatgtggaaaaggtatgatatagaaaataatgttgtt-atatcattcaagtttttattattaatgatgctatgtt 2842266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 14508188 - 14508074
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| |||| |||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||   ||||||    
T  14508188 ttgagttacatatatttatgtggaaaaggtattatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttg 14508090  T
Q  241 ttttatgttgttgtct 256  Q
    || |||||| ||||||    
T  14508089 ttgtatgtttttgtct 14508074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 15932237 - 15932311
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    |||||| |||| |||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||    
T  15932237 ttatgtggaaattgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtt 15932311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 40807333 - 40807244
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | || ||||| |||||||||||| | |||||||    
T  40807333 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattaaagttattattattaatgatgctatgtt 40807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 6155998 - 6155866
Alignment:
Q  111 tctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagtt 209  Q
    |||||||||| |||| || ||||||||  ||||| ||| ||||||| ||||||  | | ||||||||||||||| |||| ||||| ||||| ||||||||    
T  6155998 tctgaattaatatgaatattgttgttgaataatttgagatacatatgttatgtgaatattgtatgatatagaaa-tattgttgttcatatcattcaagtt 6155900  T
Q  210 gtt-attattaatgtttctatgttacaagttgtt 242  Q
    ||| ||| ||||||||  || ||| |||||||||    
T  6155899 gttgattgttaatgttgttaagttgcaagttgtt 6155866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 6805615 - 6805675
Alignment:
Q  77 aaagttgtttataattatattgtggttcagtgagtctg-aattaaaatgattaatgttgtt 136  Q
    ||||||||||||||| ||| ||| |||||| ||||||| |||||| |||||||||||||||    
T  6805615 aaagttgtttataataataatgttgttcagagagtctgaaattaagatgattaatgttgtt 6805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 12269876 - 12269797
Alignment:
Q  6 tggcagtcaaccatgtttagggttcttgcgatc-tttgtcgcacgtgatgttctga------ctttggggtaggaatgaa 78  Q
    |||||| ||||| |||||||| ||||||||||| |||||||||||||||||| |||      ||||||||||||||||||    
T  12269876 tggcagacaaccttgtttaggtttcttgcgatcttttgtcgcacgtgatgttatgaactgacctttggggtaggaatgaa 12269797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 12275880 - 12275813
Alignment:
Q  193 tttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||| ||| ||||||    
T  12275880 tttatatcattcaagttgttattattaatattgctatgtttcaagttg-cttatgttgctgtttctgct 12275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 17538444 - 17538365
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatg 222  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||| ||||| | || ||||||||||||||||||    
T  17538444 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttg-ttataccattaaagttgttattattaatg 17538365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 54876158 - 54876268
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| ||||||||||| || ||||| ||  |||| | |||||||||    
T  54876158 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaatattgttatgatgcaagttgtt 54876256  T
Q  243 ttatgttgttgtc 255  Q
     | ||||||||||    
T  54876257 at-tgttgttgtc 54876268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 16050206 - 16050138
Alignment:
Q  113 tgaattaaaatgattaatgttgttggttaattgagctacatatattatgttgaaaatgtatgatatagaaa 183  Q
    |||||||||||||||||||||| |  ||  ||||  |||||||||||||| |||| |||||||||||||||    
T  16050206 tgaattaaaatgattaatgttggttatt--ttgatatacatatattatgtggaaagtgtatgatatagaaa 16050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 19569044 - 19569160
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||| ||  | ||||||||  |||| | |||||||||    
T  19569044 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttattgctgttaatgttgttatgatgcaagttgtt 19569142  T
Q  243 ttatgttgttgtctctgct 261  Q
     | ||||| ||||||||||    
T  19569143 at-tgttgctgtctctgct 19569160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 17046539 - 17046471
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  17046539 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 17046471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 17691486 - 17691578
Alignment:
Q  149 tacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||||||||||||  | | ||||||||||||||| |||| ||||| ||||| ||||||||||| || ||||| ||  |||| | |||||||||    
T  17691486 tacatatattatgtgaatattgtatgatatagaaa-tattgttgttcatatcattcaagttgttgttgttaatattgttatgatgcaagttgtt 17691578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 35961542 - 35961607
Alignment:
Q  78 aagttgtttataattat-attgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||||| | |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  35961542 aagttgtttataattattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 35961607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 41924 - 41860
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  41924 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 41860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 22652227 - 22652163
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  22652227 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 22652163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20596 - 20843
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||  | | ||||| |||||||||||||||||||||| |||||||||||      ||||||||||||||||||||||||||||||||      
T  20596 ctcagtggcagtcaggcttatttagtgttcttgcgatctttgtcgcacatgatgttctgagttggtctttggggtaggaatgaaagttgtttataattgc 20695  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    |||||  ||||||||||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||||||||  ||| |||||||||||| ||||||| | ||    
T  20696 attgtctttcagtgagtctgaattaatatgattattgtagttggataatttgagatacatatattatgtgaaaattgtatgatatag-aaatattgtcgt 20794  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    | ||||| |||||||| || || | ||||||  |||||| |||||||||    
T  20795 tcatatcattcaagttattgttgtcaatgttgttatgttgcaagttgtt 20843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 45754939 - 45754670
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt-----tggggtaggaatgaaagttgtttataattata 95  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||     |||| |||||||| ||||||||||| |   ||    
T  45754939 ctcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcatgtgatgttgtgagttgatcttgggataggaatggaagttgtttattaagtta 45754840  T
Q  96 ttgtggttcagtgagtctgaattaaaatgattaatg-ttgttggttaatt-gagctac--atatattatgttgaaaatgtatgatatagaaaatattatt 191  Q
    | |   | ||| ||| ||||| |||||||||||||| |||||||||| || ||| ||   ||||||||| ||||||||||||||||| |||| | |||||    
T  45754839 tagatttacagagagcctgaaataaaatgattaatgattgttggttagtttgagatatttatatattatattgaaaatgtatgatatggaaattgttatt 45754740  T
Q  192 gtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||| | |||||||||| |||||||||  ||||||||||||||| |||||||||  |||||||||    
T  45754739 gtttatatcatccaagttgttagtattaatgtggctatgttacaagttgatttatgttgcagtctctgct 45754670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 115 - 261
Target Start/End: Complemental strand, 18275276 - 18275130
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18275276 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtatgatatagaaaatattgttgtttatatcattcaagttgtta 18275177  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||| ||| ||||||| ||||||| |||||||||||||| |||||    
T  18275176 ttattaacgttgctatgttgcaagttg-tttatgttgttgtccctgct 18275130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 13302267 - 13302007
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| |||||||||||||||||||||| |||| ||||||      |||||||||| ||||| |||||| |||||| | |    
T  13302267 ctcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacttgattttctgagttggtctttggggtatgaatggaagttgattataaatgt 13302168  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || ||  ||||||||||||||||||| ||||||  |||||||| |||| ||||| |  ||||||||||| |||| |||||||||||| ||||||| ||||    
T  13302167 atagtctttcagtgagtctgaattaatatgattgttgttgttgtttaatttgagatctatatattatgtggaaattgtatgatatag-aaatattgttgt 13302069  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtct 256  Q
    | ||||| |||||||||||||||| | ||||  |||||| |||||| ||| ||||||||||||    
T  13302068 tcatatcattcaagttgttattatcagtgttgttatgttgcaagtt-tttgatgttgttgtct 13302007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 51476391 - 51476194
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatatta 159  Q
    |||||||||| ||||||| |||||||||||   |||     |||||||| ||| || ||| ||||||||||||||||||||||| | |||||||||||||    
T  51476391 ctttggggtaagaatgaatgttgtttataaaggtataacctttcagtgaatctaaactaatatgattaatgttgttggttaatttaagctacatatatta 51476292  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    ||| |||||||||||||||||| ||||   ||||||||||  ||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||||    
T  51476291 tgtggaaaatgtatgatatagataataccgttgtttatattattcaagttgttattattaatgttgctatgttgcaagttg-tttatgttgttctctct 51476194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 52983558 - 52983361
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   ||| |   |||| ||| ||| |  ||| || ||| |||||||||||||||| | |||||||||||||||    
T  52983558 ttggggtaggaatggaagttgtttataaaggtatagcttttcactgaatctaagctaatataattgatgttgttggttaatttaagctacatatattatg 52983459  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgc 260  Q
    | ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||  |||||| |||||||  |||||||| |||||||||    
T  52983458 tggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatgttgttatgttgcaagttg-cttatgttgatgtctctgc 52983361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 115 - 261
Target Start/End: Complemental strand, 18270622 - 18270476
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| || |||||||| ||| ||||||||    
T  18270622 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtatgatatagaaaatattgttttttatatcattctagttgtta 18270523  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| | |||  |||||| ||||||| |||||||||||||| |||||    
T  18270522 ttatttacgttgttatgttgcaagttg-tttatgttgttgtccctgct 18270476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 38057390 - 38057490
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||| ||||    
T  38057390 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgttgtttctg 38057488  T
Q  260 ct 261  Q
    ||    
T  38057489 ct 38057490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 261
Target Start/End: Complemental strand, 42697132 - 42696935
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaat-tgagctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   | | |   ||||| || ||| |||| || ||||||||||| ||| ||||| |||  |||||||||||||    
T  42697132 ttggggtaggaatggaagttgtttataaaggtttagcctttcagagaatctaaattgaactgattaatgttcttgattaatgtgaaatacatatattatg 42697033  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||| ||||||||||||||||| | ||||| ||||| | |||| |||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  42697032 t-gaaaaggtatgatatagaaaataatgttgtt-atatcatccaagatgttgttattaatgttgctacgttgcaagttgttttatgttgttgtctctgct 42696935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 13528485 - 13528611
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||| |  ||||||||||| |||||||||||     
T  13528485 aattaatataattgatgttgttggttaattcaagctatatatattatgtggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttg 13528584  T
Q  214 ttattaatgtttctatgttacaagttg 240  Q
    |||||||| || ||||||| |||||||    
T  13528585 ttattaatattgctatgttgcaagttg 13528611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 18823953 - 18823821
Alignment:
Q  129 atgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttct 227  Q
    |||||||||||||||| | |||| ||||||||||| |||||| ||||||||||||||| |  ||||||||||| ||||||||||| |||||||| ||  |    
T  18823953 atgttgttggttaatttaagctatatatattatgtggaaaatatatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgtt 18823854  T
Q  228 atgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| |||||||  |||||||| ||||||||||    
T  18823853 atgttgcaagttg-cttatgttgctgtctctgct 18823821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 19761964 - 19762064
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||| ||||||||    
T  19761964 tgttgaaaatgtatgatatggaaattattattgattatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgatgtctctg 19762062  T
Q  260 ct 261  Q
    ||    
T  19762063 ct 19762064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 20588015 - 20587896
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  20588015 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatactatgttgtgaagttg 20587917  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||| ||||||||||    
T  20587916 ttgtatgttgctgtctctgct 20587896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 20592553 - 20592434
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  20592553 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatactatgttgtgaagttg 20592455  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||| ||||||||||    
T  20592454 ttgtatgttgctgtctctgct 20592434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 21181067 - 21181162
Alignment:
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||||| |||||    
T  21181067 aaaatatatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtccctgct 21181162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 44822851 - 44822938
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| |  ||||||| |||||||    
T  44822851 tatattatgaggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatatcactatgttgcaagttg 44822938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 22349901 - 22349808
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||  ||||| ||||||| |||| || |||||||||||||    
T  22349901 tgttgaaaatgtatgatatggaaattattattgtttatatcattcaagttattattatcgatgttgctatgttgcaagatg-tttatgttgttgt 22349808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 1642793 - 1642655
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatta 219  Q
    |||||||||||||||| |||||| |||  |||||||||||||| ||||||||||| ||||||||||| | ||||| ||||| |||||| ||||||| ||     
T  1642793 aatgattaatgttgttagttaatgtgaaatacatatattatgt-gaaaatgtatgttatagaaaataatgttgtt-atatcattcaagatgttattgttg 1642696  T
Q  220 atgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||| | |||||||  ||| ||||| |||||||||||||||||    
T  1642695 atgctgctatgttgtaagatgttt-atgttgttgtctctgct 1642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 16400978 - 16400882
Alignment:
Q  165 aaaatgtatgatatagaaaatattattgtttata-tctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||||| |||||||||||  ||||||||| || |||||||||||||||||||| |||||||||| |||||||  ||||||||||||| |||||    
T  16400978 aaaatgtatgagatagaaaatatcgttgtttatagtcattcaagttgttattattaatatttctatgttgcaagttg-cttatgttgttgtccctgct 16400882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 21046764 - 21046880
Alignment:
Q  143 ttgagctacatatat-tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  21046764 ttgagttacatatatctatgtggaaaaggtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatgctatgttgtgaagttg 21046862  T
Q  241 ttttatgttgttgtctct 258  Q
    || |||||||||||||||    
T  21046863 ttgtatgttgttgtctct 21046880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 7792582 - 7792689
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  ||||||||||||||||||||||||  ||||  ||||| |||||||||||||||||||| || ||||||| |||||||  |||||||| |    
T  7792582 tatattatgaggaaaatgtatgatatagaaaatatcgttgtaaatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgct 7792680  T
Q  253 gtctctgct 261  Q
    |||| ||||    
T  7792681 gtctttgct 7792689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 8276729 - 8276830
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||| |||||  |||||| |||| |  ||||||||| ||| ||||    
T  8276729 tgttgaaaatgtatgatatagaaattattattgtatatatcattcaagttgttgttattgatgttgttatgttgcaagat-atttatgttgatgtttctg 8276827  T
Q  260 ctc 262  Q
    |||    
T  8276828 ctc 8276830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 10813273 - 10813354
Alignment:
Q  173 tgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  |||||||||||||    
T  10813273 tgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtc 10813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 42912387 - 42912268
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| | |||||||   ||||||    
T  42912387 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtgaagttg 42912289  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||| ||||| ||||    
T  42912288 ttgtatgttgctgtctttgct 42912268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 19676082 - 19675969
Alignment:
Q  149 tacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttac-aagttgttttat 246  Q
    |||||||||| ||||  |||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||   |||||||| |||    
T  19676082 tacatatatttatgtgcaaaaggtatgatatagaaaataattttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtat 19675984  T
Q  247 gttgttgtctctgct 261  Q
    |||||||||||||||    
T  19675983 gttgttgtctctgct 19675969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 4596560 - 4596679
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| |||||||||||||| || | ||||| ||| | ||||||||||||||||||||| | |||||||   || |||    
T  4596560 ttgagttacatatatttatgtggaaaaggtatgatatagaaactaatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaaattg 4596658  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  4596659 ttgtatgttgttgtctctgct 4596679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24726797 - 24726742
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||    
T  24726797 ctcagtgccagttaaccttgtttagggttcttgcgatccttgtcgcacgtgatgtt 24726742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 16059029 - 16059118
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||    
T  16059029 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtt 16059118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 24815582 - 24815647
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaat 221  Q
    |||||||||  |||||||||||||||||||||   ||| ||||||||| ||||||||||||||||||||    
T  24815582 tatattatgaggaaaatgtatgatatagaaaa---tatcgtttatatcattcaagttgttattattaat 24815647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 20634350 - 20634469
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| | |||||||| |||||| | ||||| ||| | ||||||||||||||||||||| | |||||||   ||||||    
T  20634350 ttgagttacatatatttatgtggaaaaggcatgatataaaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtgaagttg 20634448  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||| ||||||||||    
T  20634449 ttgtatgttgctgtctctgct 20634469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 24726631 - 24726567
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
    ||||||||| ||||||||| |||| |||||||||||||||| |||||| |||| |||| ||||||    
T  24726631 tgttgaaaacgtatgatatggaaattattattgtttatatcattcaagctgttgttatcaatgtt 24726567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 19761802 - 19761852
Alignment:
Q  6 tggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    |||||||||||| |||||| | ||||||||||||||||||||| |||||||    
T  19761802 tggcagtcaaccttgtttaagattcttgcgatctttgtcgcacatgatgtt 19761852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 38887842 - 38887958
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || | ||||| ||| | | ||||| ||||||||||||||| ||||| | |||||||||    
T  38887842 ttgaggtacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-ataccatccaagtggttattattaatgttgctatgattcaagttgtt 38887939  T
Q  243 ttatgttgttgtctctgct 261  Q
     ||||||| ||| ||||||    
T  38887940 gtatgttgctgtttctgct 38887958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 12328431 - 12328483
Alignment:
Q  5 gtggcagtcaaccatgtttagggttcttgcgatc-tttgtcgcacgtgatgtt 56  Q
    ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  12328431 gtggcagacaaccttgtttaggtttcttgcgatcttttgtcgcacgtgatgtt 12328483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 14238327 - 14238441
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || | ||||| ||| | | ||||| |||||||||||||||  |||| | |||||||||    
T  14238327 ttgagatacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-ataccatccaagtggttattattaatgttgttatgattcaagttgtt 14238424  T
Q  243 ttatgttgttgtctctg 259  Q
     ||||||| ||||||||    
T  14238425 gtatgttgctgtctctg 14238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 7052770 - 7052886
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||| ||  | | ||||||||||||||| || | ||||| ||| | | ||||| ||||||||||||||| ||||| | |||||||||    
T  7052770 ttgagatacatatattaggtgaatattgtatgatatagaaa-taatgttgtt-ataccatccaagtggttattattaatgttgctatgattcaagttgtt 7052867  T
Q  243 ttatgttgttgtctctgct 261  Q
     ||||||| ||||| ||||    
T  7052868 gtatgttgctgtctgtgct 7052886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 22124580 - 22124547
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    |||||||||||||||||||| |||||||||||||    
T  22124580 tgtttagggttcttgcgatccttgtcgcacgtga 22124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 41227433 - 41227508
Alignment:
Q  156 attatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||||| ||||| ||||||||||||||||| | ||| ||||| | ||||| ||||||| ||||||| | |||||||    
T  41227433 attatgtggaaaaggtatgatatagaaaataatgttg-ttataccattcaatttgttatcattaatgatgctatgtt 41227508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 50000870 - 50000806
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  50000870 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 50000806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 51327106 - 51327054
Alignment:
Q  5 gtggcagtcaaccatgtttagggttcttgcgatcttt-gtcgcacgtgatgtt 56  Q
    ||||||| ||||| |||||||| ||||||| |||||| |||||||||||||||    
T  51327106 gtggcagacaaccttgtttaggtttcttgcaatcttttgtcgcacgtgatgtt 51327054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 3661 - 3904
Alignment:
Q  2 tcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattata 95  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||||      ||||||||||||||||||||| ||||| || | ||    
T  3661 tcagtggcagtcagccttgtttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtaggaatgaaagtcgtttacaaatgta 3760  T
Q  96 ttgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtt 194  Q
    ||||  |||||||| |||||||||| ||||  ||||||||||| ||| ||||| ||||||||||||||  | ||| |||||||||| ||||||| |||||    
T  3761 ttgtctttcagtgaatctgaattaatatgaagaatgttgttggataatttgagatacatatattatgtgaataatatatgatatag-aaatattgttgtt 3859  T
Q  195 tatatctttcaagttgttattattaatgtttctatgttacaagtt 239  Q
     ||||| |||| |||||| || ||||||||  |||||| ||||||    
T  3860 catatcattcaggttgttgttgttaatgttgttatgttgcaagtt 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 95766 - 95499
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||  || |||      ||||||| ||||||| |||||||||||  |||||    
T  95766 ctcagtggcagtcaaccttgtttagggttcttgcgatcattgtcgcacgtgagcttatgagttggtctttgggataggaatcaaagttgtttaagattat 95667  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    | || ||||||| |||  |||||||| |||||||||||||||  ||||| |||  ||| |||||||||| ||| |||  ||||||||||| ||||||||     
T  95666 aatgaggttcagagagcgtgaattaagatgattaatgttgttacttaatgtgaaatacttatattatgtggaagatggttgatatagaaattattattgc 95567  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||| |||||| |||||||||| || || ||||| | || ||| ||| |||||| ||||||||||    
T  95566 ttatatcattcaagatgttattatttatattgctatgctgcatgttatttaatgttgatgtctctgct 95499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 261
Target Start/End: Complemental strand, 3448 - 3250
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    ||||||||||||||||||||||||||||   ||| |   || ||||| ||| |||||| || ||| | |||||||||||||| | |||||||||||||||    
T  3448 ttggggtaggaatgaaagttgtttataaaggtatagccttttagtgaatctaaattaatataattgacgttgttggttaatttaagctacatatattatg 3349  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||||||||||||||||||||||  ||||||||| | |||||||||||||| ||||| || ||||||| ||||||| ||||||||||||||||||||    
T  3348 tggaaaatgtatgatatagaaaatatcgttgtttataacattcaagttgttattgttaatattgctatgttgcaagttg-tttatgttgttgtctctgct 3250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 109645 - 109423
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  ||||||||||||||||||||||| ||||||||||| |||      ||||||||||| |||| |||||||||||||   |    
T  109645 ctcagtggcagtcagccttacttagggttcttgcgatctttgtcacacgtgatgttatgagttggcctttggggtagaaatggaagttgtttataaaggt 109546  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
    || |   | ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||| ||| | |||||| |||    
T  109545 atagccttacagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgtggaaattgtatgatgtag-agatattaatgt 109447  T
Q  194 ttatatctttcaagttgttattat 217  Q
    | ||||| ||||||||||||||||    
T  109446 tcatatcattcaagttgttattat 109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 254
Target Start/End: Complemental strand, 59704 - 59565
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| || |||||||| ||| ||||||||    
T  59704 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtatgatatagaaaatattgttttttatatcattcgagttgtta 59605  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    ||||||| |||  |||||| ||||||| |||||||||||||    
T  59604 ttattaacgttgttatgttgcaagttg-tttatgttgttgt 59565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 34028 - 34211
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatta 159  Q
    |||| ||||||||||| |||||||||||||   ||| ||  |||||||| ||| || | | || ||| |||||||||||||||| ||| |||||||||||    
T  34028 ctttcgggtaggaatggaagttgtttataaaggtatagtctttcagtgaatctaaactgatataattgatgttgttggttaatttgagttacatatatta 34127  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    ||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||    
T  34128 tgtggaaaatgtatgatatagaagatattgttgtttatatcattcaagttgttattattaatgttgctatgttgctagttgttt 34211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 11091 - 10891
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatta 159  Q
    |||||||||||||||| |||||||||||||   ||| |   ||| |||| ||| || | | || ||| |||||||||||||||| ||| |||||||||||    
T  11091 ctttggggtaggaatggaagttgtttataaaggtatagcctttccgtgaatctaaactgatataattgatgttgttggttaatttgagttacatatatta 10992  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||| |||||||||||||||| |  ||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  10991 tgtggaaaatgtatgatatatatgatattgttctttatatcattcaagttgttattattaatgtttctatgttgcaagttg-tctatgttgttgtctctg 10893  T
Q  260 ct 261  Q
    ||    
T  10892 ct 10891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 261
Target Start/End: Complemental strand, 7033 - 6835
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   ||| |   |||||||| | | |  ||| || ||| |||||||||||||||| | |||||||||||||||    
T  7033 ttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatttaagctaatataattgatgttgttggttaatttaagctacatatattatg 6934  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    | ||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||| ||||||| |||||||  |||||||| ||||||||||    
T  6933 tggaaaatgtatgatatagaaaatattgttgtttatatcatttgagttgttattattaatgttgctatgttgcaagttg-cttatgttgctgtctctgct 6835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 261
Target Start/End: Complemental strand, 521 - 325
Alignment:
Q  65 ggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatgtt 163  Q
    |||||||||||| |||||||||||||   ||| |   |||||| | ||| || ||| || ||| |||||||||||||||| | |||| |||||||||||     
T  521 ggggtaggaatggaagttgtttataaaggtatagcctttcagttaatctaaactaatataattgatgttgttggttaatttaagctatatatattatgtg 422  T
Q  164 gaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||||||||||||||||||  |||||||| || |||||||||||||||||||| || ||||||| |||||||  |||||||||||||||||||    
T  421 gaaaatgtatgatatagaaaatatcgttgtttatttcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgttgtctctgct 325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 28753 - 28493
Alignment:
Q  4 agtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacg-tga---tgttctga-ctttggggtaggaatgaaagttgtttataattatattg 98  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| | |||   ||   ||  |||||||||||||||| |||||||||||||   | | |    
T  28753 agtggcagtcaaccttgtttagggttcttgcgatctttatcgcatgatgacaatgagttggtctttggggtaggaatggaagttgtttataaaggtttag 28654  T
Q  99 tggttcagtgagtctgaattaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttat 197  Q
       ||||| || ||| ||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||| ||||| || | ||||| ||    
T  28653 cctttcagaga-tctaaattaaaatgattaatgttgttggttaatgtgaaatacatatattatgt-gaaaatgtatgatacagaaactaatgttgtt-at 28557  T
Q  198 atctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||| ||||||||||||||||||||||  ||||| | ||||||||||||||||| | ||||||||    
T  28556 atcattcaagttgttattattaatgtgactatgctgcaagttgttttatgttgctatctctgct 28493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 47205 - 47399
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattgagctacatata-ttatg 161  Q
    |||||||||||| |||||||||| || ||||||||||| ||||| ||| ||||||||||| ||||||  | |||| | | ||| | |||||||| |||||    
T  47205 ttggggtaggaaagaaagttgttgatgattatattgtgtttcagagagcctgaattaaaa-gattaagatagttgttaatttgggttacatatatttatg 47303  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttgttttatgttgttgtctct 258  Q
    | ||||| ||||||||||||||| | | ||| ||||| | ||||||||||||| ||||||| | |||||||   |||||||| |||||||||||||||    
T  47304 tggaaaaggtatgatatagaaaa-aatgttg-ttataccattcaagttgttataattaatgatgctatgttgtgaagttgttgtatgttgttgtctct 47399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 25250470 - 25250725
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || || |||| |||||||| ||||||||||||||||||||| |||      ||||||||||||||||||||||||||||||   |    
T  25250470 ctcagtggcagtcagccctgcttagtgttcttgcaatctttgtcgcacgtgatgttatgagttggtctttggggtaggaatgaaagttgtttataaaggt 25250569  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
     | |   ||| | || ||| |||||||||||||| ||||| |||||||| |||       ||||||||| ||||||||||||||||||||||| | |||     
T  25250570 ttagcctttcggagaatctaaattaaaatgattattgttgatggttaatgtga-------atattatgt-gaaaatgtatgatatagaaaataatgttga 25250661  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    | ||||| | ||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  25250662 t-atatcatccaatttgttgttattaatgttgctatgttgcaagttgttttatgttgttgtctct 25250725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 25314255 - 25314510
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || || |||| |||||||| ||||||||||||||||||||| |||      ||||||||||||||||||||||||||||||   |    
T  25314255 ctcagtggcagtcagccctgcttagtgttcttgcaatctttgtcgcacgtgatgttatgagttggtctttggggtaggaatgaaagttgtttataaaggt 25314354  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgt 193  Q
     | |   ||| | || ||| |||||||||||||| ||||| |||||||| |||       ||||||||| ||||||||||||||||||||||| | |||     
T  25314355 ttagcctttcggagaatctaaattaaaatgattattgttgatggttaatgtga-------atattatgt-gaaaatgtatgatatagaaaataatgttga 25314446  T
Q  194 ttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    | ||||| | ||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  25314447 t-atatcatccaatttgttgttattaatgttgctatgttgcaagttgttttatgttgttgtctct 25314510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21618613 - 21618857
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactttg-----gggtaggaatgaaagttgtttataattata 95  Q
    |||||||| | |||||  ||||||||||||||||||||||| |||||||| | ||||| | || |     ||||||||||| |||||||||||||||||     
T  21618613 ctcagtggaattcaactttgtttagggttcttgcgatctttttcgcacgtaacgttctaagttggtctttgggtaggaatggaagttgtttataattatg 21618712  T
Q  96 ttgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtt 194  Q
    |||| |||||||||||||||||||  |||| || | ||||||| ||| ||||| || |||||||||||  | | |||||||||||| ||||||| |||||    
T  21618713 ttgttgttcagtgagtctgaattattatgaatattcttgttggataatttgagataaatatattatgtgaatattgtatgatatag-aaatattgttgtt 21618811  T
Q  195 tatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
     ||||| |||||||| || || || |||||  ||||||||||||||    
T  21618812 catatcattcaagttattgttgttgatgttgttatgttacaagttg 21618857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 20469697 - 20469884
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| ||    |||| ||||||||||||||||||||||||||| || |||      |||||||| ||||| | ||||||||||||| | |    
T  20469697 ctcagtggcagtcagcctcacttagagttcttgcgatctttgtcgcacgtgatattatgagttggtctttggggcaggaaaggaagttgtttataaatgt 20469796  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatataga 181  Q
    || |   ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||    
T  20469797 atagcctttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgtggaaattgtatgatataga 20469884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29914754 - 29914587
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||||||||| ||||||| ||||||| |||| ||||||||||||| ||||| |      ||||  ||||||||||||||| ||||||||||||    
T  29914754 ctcagtggcagtcaaccttgtttagtgttcttgtgatccttgtcgcacgtgacgttctaagttagtctttcaggtaggaatgaaagtggtttataattat 29914655  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttgg-ttaattgagctacatatattatg 161  Q
    ||||| |||||||||||||||||||| |||| |  |||| |||| | | ||||| |||||||||||||    
T  29914654 attgttgttcagtgagtctgaattaatatgaatgttgtttttggatgatttgagatacatatattatg 29914587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 259
Target Start/End: Original strand, 8952691 - 8952885
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   ||| |   |||||||| ||| |  ||| || ||| |||||||||||||||| | |||| ||||||| ||    
T  8952691 ttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaatataattgatgttgttggttaatttaagctatatatattgtg 8952790  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
      |||||||||||||||||||||| |  ||||||||||| ||||||||||| |||||||| || ||||||| |||||||  |||||||||||||||||    
T  8952791 --gaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttg-cttatgttgttgtctctg 8952885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 22357597 - 22357747
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||||||||||   ||| |   |||||||| ||| || ||| || ||| |||||||||||||||| | |||| ||||||||||    
T  22357597 ttggggtaggaatggaagttgtttataaaggtatagcttttcagtgaatctaaactaatataattgatgttgttggttaatttaagctatatatattatg 22357696  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    | |||||||||||||||||||||| || ||||||||||| |||||||||||    
T  22357697 tggaaaatgtatgatatagaaaatgttgttgtttatatcattcaagttgtt 22357747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 10953287 - 10953187
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||||| |||| |||||||||||||| | |||||||||||||| || ||||| ||||||| |||| || ||||||||||||||||||    
T  10953287 tgttgaaaatgtatgatatggaaattattattgtttataccattcaagttgttattgttgatgttgctatgttgcaagatg-tttatgttgttgtctctg 10953189  T
Q  260 ct 261  Q
    ||    
T  10953188 ct 10953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 255
Target Start/End: Original strand, 24277335 - 24277437
Alignment:
Q  152 atatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgt 251  Q
    ||||||||||  ||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||| || ||||||| |||||||  |||||||||    
T  24277335 atatattatgaggaaaatgtatgatatagaaaatatcgttgtttataccattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgt 24277433  T
Q  252 tgtc 255  Q
    ||||    
T  24277434 tgtc 24277437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 24384878 - 24384776
Alignment:
Q  152 atatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgt 251  Q
    ||||||||||  ||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||| || ||||||| |||||||  |||||||||    
T  24384878 atatattatgaggaaaatgtatgatatagaaaatatcgttgtttataccattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgt 24384780  T
Q  252 tgtc 255  Q
    ||||    
T  24384779 tgtc 24384776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 17812718 - 17812617
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  | |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  17812718 tatattatgagggaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttg-cttatgttgtt 17812620  T
Q  253 gtc 255  Q
    |||    
T  17812619 gtc 17812617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 261
Target Start/End: Original strand, 21406322 - 21406521
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatatta 159  Q
    |||||||||| ||||||||||||| ||||||| ||||||  | || ||| |||||||||| ||||   |||||||||| ||||| ||| |  ||||||||    
T  21406322 ctttggggtatgaatgaaagttgtatataattgtattgtcttacaatgaatctgaattaatatgaagtatgttgttgggtaatttgagatgtatatatta 21406421  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
     ||  | | ||||||||||| ||| || | ||||| ||| | | ||||| ||||||||||||||| ||||| | ||||||||| ||||||| ||||||||    
T  21406422 cgtgaatattgtatgatatacaaa-taatgttgtt-ataccatccaagtggttattattaatgttgctatgattcaagttgttgtatgttgctgtctctg 21406519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 23200256 - 23200394
Alignment:
Q  121 aatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattatta 219  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||||| ||||| ||||||||||| | ||| ||||||| |||||| ||||||| ||     
T  23200256 aatgattaatgttgttggttaatgtgaaatacatatattatg-tgaaaaggtatgttatagaaaataatgttg-ttatatcattcaagatgttattgttg 23200353  T
Q  220 atgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||| | |||||||  ||| || ||||||||||||||| ||||    
T  23200354 atgctgctatgttgtaagatg-tttatgttgttgtctatgct 23200394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10953454 - 10953403
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  10953454 ctcagcggcagtcaatcttgtttagggttcttgcgatctttgtcgcacgtga 10953403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 41876310 - 41876384
Alignment:
Q  184 atattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||| ||||||||||| ||| ||||||||||||||| ||| ||||||| ||||||| ||||||||| ||||||||    
T  41876310 atattgttgtttatatcattcgagttgttattattaacgttgctatgttgcaagttg-tttatgttgctgtctctg 41876384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 20565803 - 20565701
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  |||| |||||||||||||| |||| |  ||||||||  ||| ||||| ||||||||||||||  | | ||||||||||||    
T  20565803 tgtttataattgtattgtctttcaatgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 20565704  T
Q  181 aaa 183  Q
    |||    
T  20565703 aaa 20565701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 23470097 - 23469996
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtc 112  Q
    ||||||||||||||||||||||||||||| | |||||| |||      | |||||||||||||| | |||| ||||| | || |||  ||||||||||||    
T  23470097 tgtttagggttcttgcgatctttgtcgcaggagatgttatgagttgatcattggggtaggaatggaggttgattatagtaatgttgatgttcagtgagtc 23469998  T
Q  113 tg 114  Q
    ||    
T  23469997 tg 23469996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 32608085 - 32608176
Alignment:
Q  149 tacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||||||||||||  | | ||||||||||||||| || | ||||| ||||| | ||||| ||||||||||||||| ||||| | |||||||||    
T  32608085 tacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-atatcatccaagtggttattattaatgttgctatgattcaagttgtt 32608176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 263254 - 263190
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  263254 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 263190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 19920971 - 19920892
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatg 222  Q
    ||||| |||||||||| |||| |||||  |||||||||||||||| | ||| ||||| | |||||||| ||||||||||||    
T  19920971 ttgagttacatatatttatgtggaaaaactatgatatagaaaataatgttg-ttataccattcaagttattattattaatg 19920892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 30616031 - 30615979
Alignment:
Q  5 gtggcagtcaaccatgtttagggttcttgcgatc-tttgtcgcacgtgatgtt 56  Q
    ||||||| ||| | |||||||| ||||||||||| ||||||||||||||||||    
T  30616031 gtggcagacaatcttgtttaggtttcttgcgatcttttgtcgcacgtgatgtt 30615979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 33473219 - 33473283
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  33473219 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 33473283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 2503 - 2754
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactttg------gggtaggaatgaaagttgtttataattat 94  Q
    |||||||||||||| || |  |||| ||||||||||||||||||||| ||||||||  || || |      ||||| ||||| |||||||||||||   |    
T  2503 ctcagtggcagtcagccttacttagagttcttgcgatctttgtcgcatgtgatgttacgagttggtctgtagggtatgaatggaagttgtttataaaggt 2602  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt--gagctacatatattatgttgaaaatgtatgatatagaaaatattattg 192  Q
    || |   ||||| |||||||||||||||| ||||||| ||||||||||||  ||| |||||||||||||| |||| |||||||||||||||||||| |||    
T  2603 atagcctttcagagagtctgaattaaaatcattaatgatgttggttaattttgagatacatatattatgtggaaattgtatgatatagaaaatattgttg 2702  T
Q  193 tttatatctttcaagttgttattatta-atgtttctatgttacaagttgttt 243  Q
    || ||||| ||||| | |||||||| |  |||| ||||||| ||||||||||    
T  2703 ttcatatcattcaaatcgttattatcagttgttgctatgttgcaagttgttt 2754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 11397 - 11541
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||||||| ||||| |||||||| |||||||||| ||||||||||| |||||| |||      ||||||||||| |||||||||||||||||||  |    
T  11397 ctcagtggcagacaaccttgtttaggattcttgcgatatttgtcgcacgagatgttatgagttggtctttggggtagaaatgaaagttgtttataatatt 11496  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggt 139  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||    
T  11497 attgttgttcagagagtctgaattaagatgattaatgttgttggt 11541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 261
Target Start/End: Original strand, 3597 - 3782
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatg-ttgttggttaattga-gctacatatattatgttgaaaatgtatg 174  Q
    ||||||||||||||  || ||| |||||| ||||||||| |||| |||||||||| ||||| |||| || | | ||  |||||||||  | |||||| ||    
T  3597 aagttgtttataatattaatgttgttcagggagtctgaaattaagatgattaatgattgttagttagtttaagatatttatattatgagggaaatgtgtg 3696  T
Q  175 atatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||||||||||  ||||||||||| || |||||||||||| |||| || ||||||| |||||||  ||||||||||||| |||||    
T  3697 atatagaaaatatcgttgtttatatcatttaagttgttattactaatattgctatgttgcaagttg-cttatgttgttgtccctgct 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 6253 - 6121
Alignment:
Q  129 atgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttct 227  Q
    |||||||||||||||| | |||| |||| |||||| |||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| || ||    
T  6253 atgttgttggttaatttaagctatatattttatgtggaaaatgtatgatatagaaagtattgttgtttatatcattcaagttattattattaatattgct 6154  T
Q  228 atgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| ||||||| ||||||||||||||||||||    
T  6153 atgttgcaagttg-tttatgttgttgtctctgct 6121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 8405 - 8273
Alignment:
Q  129 atgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttct 227  Q
    |||||||||||||||| | |||| |||| |||||| |||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| || ||    
T  8405 atgttgttggttaatttaagctatatattttatgtggaaaatgtatgatatagaaagtattgttgtttatatcattcaagttattattattaatattgct 8306  T
Q  228 atgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| ||||||| ||||||||||||||||||||    
T  8305 atgttgcaagttg-tttatgttgttgtctctgct 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 5169 - 5039
Alignment:
Q  131 gttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctat 229  Q
    |||||||||||||| | |||| |||| |||||| |||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| || ||||    
T  5169 gttgttggttaatttaagctatatattttatgtggaaaatgtatgatatagaaagtattgttgtttatatcattcaagttattattattaatattgctat 5070  T
Q  230 gttacaagttgttttatgttgttgtctctgct 261  Q
    ||| |||||||  |||||||||||||||||||    
T  5069 gttgcaagttg-cttatgttgttgtctctgct 5039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 19383 - 19481
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| |||| || ||||||||||||| ||||    
T  19383 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgtttctatgttgcaagatg-tttatgttgttgtttctg 19481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 261
Target Start/End: Original strand, 127010 - 127254
Alignment:
Q  22 ttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctga 115  Q
    |||| |||| ||||||||||||||||||||||||| ||| ||      || |||||||||| |||||||||||||   | | |   ||||| || ||| |    
T  127010 ttagtgttcctgcgatctttgtcgcacgtgatgttatgagttggtccttgcggtaggaatggaagttgtttataaaggtttagcctttcagagaatctaa 127109  T
Q  116 attaaaatgattaatgttgttggttaat-tgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttat 214  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||| ||||  ||||||||  ||||||| | || || ||||| | ||||||||| |    
T  127110 attaaaatgattaatgttgttggttaatgtgaaatacatatattatgtggaaag-gtatgatagggaaaataatgttatt-atatcatccaagttgttgt 127207  T
Q  215 tattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    |||||| ||| ||||||| |||| |||||||||||||||||||||||    
T  127208 tattaaagttgctatgttgcaagctgttttatgttgttgtctctgct 127254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 8377 - 8277
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||| ||||    
T  8377 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgttgtttctg 8279  T
Q  260 ct 261  Q
    ||    
T  8278 ct 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 20962 - 20862
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||| ||||    
T  20962 tgttgaaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgttgtttctg 20864  T
Q  260 ct 261  Q
    ||    
T  20863 ct 20862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 2713 - 2824
Alignment:
Q  146 agctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtttta 245  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| || ||||||| |||||||  |||    
T  2713 agctatatatattatgtggaaaatgtatgatatagaaaatatcattgtttatatcattcaagttgttatttttaatattgctatgttgcaagttg-ctta 2811  T
Q  246 tgttgttgtctct 258  Q
    ||||| |||||||    
T  2812 tgttgctgtctct 2824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 574 - 839
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt-----tggggtaggaatgaaagttgtttataattata 95  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||     |||| |||||||||||||| ||||| |   ||    
T  574 ctcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgaagttgtgagttgatcttgggataggaatgaaagttatttattaagtta 673  T
Q  96 ttgtggttcagtgagtctgaattaaaatgattaatg-ttgttggttaatt-gagctacatatattatgt--tgaaaatgtatgatatagaaaatattatt 191  Q
    | |   | ||  ||| |||||| ||| ||||||||| |||||||||  || ||| ||  | ||| ||||  || |||||||||||||  ||| |||||||    
T  674 tagatttacaaagagcctgaatcaaa-tgattaatgattgttggttggtttgagatatttgtataatgtgttggaaatgtatgatatgaaaattattatt 772  T
Q  192 gtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||||||||    
T  773 gtttatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgttgtctctg 839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4101 - 4248
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||  ||||||      |||||||||||||||||||||||||||||||| |    
T  4101 ctcagtgtcagtcaaccttgtttagtgttcttgcgatctttgtcgcacgtgacattctgagttggtctttggggtaggaatgaaagttgtttataattgt 4200  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt 144  Q
    |  ||  ||||||||||||||||||| ||||  | ||||||||| |||||    
T  4201 a--gtctttcagtgagtctgaattaatatgaagattgttgttggataatt 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8661 - 8808
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattat 94  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||  ||||||      |||||||||||||||||||||||||||||||| |    
T  8661 ctcagtgtcagtcaaccttgtttagtgttcttgcgatctttgtcgcacgtgacattctgagttggtctttggggtaggaatgaaagttgtttataattgt 8760  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt 144  Q
    |  ||  ||||||||||||||||||| ||||  | ||||||||| |||||    
T  8761 a--gtctttcagtgagtctgaattaatatgaagattgttgttggataatt 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 13259 - 13166
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| |||| || |||||||||||||    
T  13259 tgttgcaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgtttctatgttgcaagatg-tttatgttgttgt 13166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 261
Target Start/End: Complemental strand, 16132 - 15977
Alignment:
Q  108 gagtctgaattaaaatgattaatg-ttgttggttaattga-gctacatatatta--tgttgaaaatgtatgatatagaaaatattattgtttatatcttt 203  Q
    |||||||||||||| ||||||||| ||||||||||||| | | ||  ||||| |  ||||| |||||||||||||||||| |||||||||||||||| ||    
T  16132 gagtctgaattaaa-tgattaatgattgttggttaatttaagatatttatataaggtgttgtaaatgtatgatatagaaattattattgtttatatcatt 16034  T
Q  204 caagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||||||||| ||||| ||||||| |||| || ||||||||| ||| ||||||    
T  16033 caagttgttattattgatgttgctatgttgcaagatg-tttatgttgatgtttctgct 15977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 17730 - 17627
Alignment:
Q  155 tattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    |||||| |||||| |||||||||| |||| | |||||||||||||| | |||| ||||| |||||||||  ||||||| ||||||||||||||||| |||    
T  17730 tattatattgaaattgtatgatatggaaattgttattgtttatatcatccaaggtgttagtattaatgtggctatgttgcaagttgttttatgttgctgt 17631  T
Q  255 ctct 258  Q
    ||||    
T  17630 ctct 17627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 342 - 474
Alignment:
Q  129 atgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttct 227  Q
    |||||||||||||||| | |||| |||| ||||||  ||||||||||||||||||| |||  ||||||||||| |||||||||||||||||||| || ||    
T  342 atgttgttggttaatttaagctatatattttatgtgaaaaatgtatgatatagaaagtatcgttgtttatatcattcaagttgttattattaatattgct 441  T
Q  228 atgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| |||||||  |||||||| ||||||||||    
T  442 atgttgcaagttg-cttatgttgctgtctctgct 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 5730 - 5630
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||||| ||||||| |||| || ||||||||||||| ||||    
T  5730 tgttgaaaatgtatgatatagaaattattattgtttatataattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgttgtttctg 5632  T
Q  260 ct 261  Q
    ||    
T  5631 ct 5630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 3028 - 2921
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||||| |||||||  ||||||||||    
T  3028 tatattatgaggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattactatgttgcaagttg-cttatgttgtt 2930  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  2929 gtccctgct 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 1913 - 2098
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatat-- 157  Q
    |||||||||||||||| |||||||||||||   ||| |   |||||||| ||| || ||| || ||| |||||||||||||| || |||||  |||||      
T  1913 ctttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggttaacttaagctatttatataa 2012  T
Q  158 tatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttt 243  Q
    ||||| |||||||||||| |||||||||||  |||||  |||| |||||||||||||||||||| || ||||||| ||||||||||    
T  2013 tatgtggaaaatgtatgagatagaaaatatcgttgttattatcattcaagttgttattattaatattgctatgttgcaagttgttt 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 960 - 800
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||| | ||||||  ||||||||||||||||||| |||| || ||||||||  ||||| ||| ||||||||||||||  | | ||||||||||||    
T  960 tgtttataaatgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 861  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||| |||||||||||||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  860 aaa-tattattgtttatatcattcaagttgttcctgttaatgttgttatgatgcaagttgtt 800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 40930 - 41062
Alignment:
Q  129 atgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttct 227  Q
    |||||||||||||||| | |||| |||| |||||| |||||||||||||||||||| |||  ||||||||||| |||||||||||||||||||| ||  |    
T  40930 atgttgttggttaatttaagctatatattttatgtggaaaatgtatgatatagaaagtatcgttgtttatatcattcaagttgttattattaatattgat 41029  T
Q  228 atgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| |||||||  |||||||| |||| |||||    
T  41030 atgttgcaagttg-cttatgttgctgtcactgct 41062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 187308 - 187468
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||| | ||||||  ||||||||||||||||||| |||| || ||||||||  ||||| ||| ||||||||||||||  | | ||||||||||||    
T  187308 tgtttataaatgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 187407  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||| |||||||||||||||| |||||||||||  | ||||||||  |||| | |||||||||    
T  187408 aaa-tattattgtttatatcattcaagttgttcctgttaatgttgttatgatgcaagttgtt 187468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 3586 - 3482
Alignment:
Q  157 ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtct 256  Q
    |||||||||||||||||||||| |||| | |||||||||||||| | |||||||||| ||| |||||  ||||||| ||||||| |||||||| ||||||    
T  3586 ttatgttgaaaatgtatgatatggaaattgttattgtttatatcatccaagttgttagtatcaatgtgactatgttgcaagttgctttatgtttttgtct 3487  T
Q  257 ctgct 261  Q
    |||||    
T  3486 ctgct 3482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3752 - 3693
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga 60  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||    
T  3752 ctcagtggcagtcaaccttgtttaggattcttgcaatctttgtcgcacgtgatgttgtga 3693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 255
Target Start/End: Complemental strand, 16977 - 16825
Alignment:
Q  102 ttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatc 200  Q
    ||||||||||| ||||||| ||||||| ||||||||| ||| ||||| ||||||||||||||  ||| ||| |||||||| ||||||| ||||| |||||    
T  16977 ttcagtgagtcggaattaatatgattattgttgttggataatttgagatacatatattatgtgaaaattgtttgatatag-aaatattcttgttcatatc 16879  T
Q  201 tttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtc 255  Q
     || |||||||| |||||||||||  |||||| ||| ||||| | ||||||||||    
T  16878 atttaagttgttgttattaatgttgttatgttgcaaattgttat-tgttgttgtc 16825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 240
Target Start/End: Complemental strand, 3291 - 3113
Alignment:
Q  63 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaattga-gctacatatattatg 161  Q
    |||||||||||||| |||||| ||||||   ||| |   |||||||| ||| |  ||| || ||| ||| |||||||||||| | |||| ||||||||||    
T  3291 ttggggtaggaatggaagttgattataaaggtatagcttttcagtgaatctaagctaatataattgatgatgttggttaatttaagctatatatattatg 3192  T
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
      |||||||||||||||||||||| |  ||||||||||| ||||||||||| |||||||| || ||||||| |||||||    
T  3191 gggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttg 3113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 1359 - 1216
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctgactt------tggggtaggaatgaaagttgtttataattat 94  Q
    ||||||| ||| ||||| |||| ||||||||||||||| |||||| ||| |||||| ||| ||      |||||||||||||||||||||| | |||  |    
T  1359 ctcagtgacagacaaccttgtt-agggttcttgcgatcgttgtcgtacgagatgttatgagttggtccttggggtaggaatgaaagttgttcaaaatatt 1261  T
Q  95 attgtggttcagtgagtctgaattaaaatgattaatgttgttggt 139  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||    
T  1260 attgttgttcagagagtctgaattaagatgattaatgttgttggt 1216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 136 - 255
Alignment:
Q  143 ttgagctacatata-ttatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||| || ||| ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  136 ttgagttacatataattttgtggaaaatgtatgatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatgctatgttgtgaagttg 234  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  235 ttgtatgttgttgtctctgct 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 5428 - 5547
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||| |||||||   ||||||    
T  5428 ttgagttacatatatttatgtggaaaaagtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgttgctatgttgtgaagttg 5526  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || ||||||||||||||||||    
T  5527 ttgtatgttgttgtctctgct 5547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 6121 - 6034
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttg 240  Q
    |||||||||| |||||||| |||||||||||||||  |||||  |||| |||||||||||||||||||| |||||||||| |||||||    
T  6121 tatattatgtggaaaatgtgtgatatagaaaatatcgttgttattatcattcaagttgttattattaatatttctatgttgcaagttg 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 53376 - 53471
Alignment:
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||| ||||| ||||||| |||| || ||||||||| ||||||||    
T  53376 ttgaaaatgtatgatatggaaattattatt-tttatatcattcaagttgttattattgatgttgctatgttgcaagatg-tttatgttgctgtctctg 53471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 159689 - 159789
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    |||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||  ||||| ||||||| |||| || |||||| || ||||||||    
T  159689 tgttgaaaatgtatgatatgaaaattattattgtttatatcattcaagttgttattatcgatgttgctatgttgcaagatg-tttatgctgctgtctctg 159787  T
Q  260 ct 261  Q
    ||    
T  159788 ct 159789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 261
Target Start/End: Complemental strand, 8379 - 8272
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgtt 252  Q
    |||||||||| ||||||||||||||||||||||||  |||||  |||| |||||||||||||||||||| ||  |||||| |||||||  |||||||| |    
T  8379 tatattatgtggaaaatgtatgatatagaaaatatcgttgttattatcattcaagttgttattattaatattgatatgttgcaagttg-cttatgttgct 8281  T
Q  253 gtctctgct 261  Q
    ||| |||||    
T  8280 gtccctgct 8272  T

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Target: scaffold0529 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 7736 - 7594
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||| |  ||||||||  ||||| ||| ||||||||||||||  | | ||||||||||||    
T  7736 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgaataattcgagatacatatattatgtgaatattgtatgatatag 7637  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
     ||||||| ||||| ||||| ||||| ||||| || ||||||||    
T  7636 -aaatattgttgttcatatcattcaaattgttgttgttaatgtt 7594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 9016 - 9106
Alignment:
Q  141 aattgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgt 231  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||| | ||||||    
T  9016 aattgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttatatcattcaagttgttattattaatgatgctatgt 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 97 - 278
Alignment:
Q  61 ctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttgg-ttaattgagctacatatatta 159  Q
    |||||||||||||  |||| |||| ||||||| ||||||  | ||||||||||||||||| |||| || ||||||||| | |||| |  ||||| |||||    
T  97 ctttggggtaggatcgaaaattgtatataattgtattgtcttacagtgagtctgaattaatatgaatattgttgttggataaatttaaatacatctatta 196  T
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||| |||| |||||| | ||| ||||||| ||||| ||||  ||||||||||| || ||||||||  || ||| |||||||||    
T  197 tgtggaaattgtatgttgtag-aaatattgttgttcatattattcaagttgttgttgttaatgttgttaagttgcaagttgtt 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 12647 - 12554
Alignment:
Q  160 tgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgt 254  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||  |||||  |||||| |||| || |||||||||||||    
T  12647 tgttgaaaatgtatgatatggaaattattattgtttatatcattcaagttattattatcgatgttgatatgttgcaagatg-tttatgttgttgt 12554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 30498 - 30409
Alignment:
Q  1 ctcagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgt 84  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||      |||||||||||||||| |||||||    
T  30498 ctcattggcagacaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgtgagttggtctttggggtaggaatggaagttgt 30409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 657 - 773
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||| | ||||| ||||| | ||||||||  ||||||| ||| |||||||  ||||||||    
T  657 ttgagatacatatattatgt-gaaaaggtatgatatagaaaataatgttgtt-atatcatccaagttgtagttattaacgttgctatgttggaagttgtt 754  T
Q  243 ttatgttgttgtctctgct 261  Q
    |||||||| | ||||||||    
T  755 ttatgttgctctctctgct 773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 5961 - 6077
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||| | ||||| ||||| | ||||||||  ||||||| ||| |||||||  ||||||||    
T  5961 ttgagatacatatattatgt-gaaaaggtatgatatagaaaataatgttgtt-atatcatccaagttgtagttattaacgttgctatgttggaagttgtt 6058  T
Q  243 ttatgttgttgtctctgct 261  Q
    |||||||| | ||||||||    
T  6059 ttatgttgctctctctgct 6077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 11446 - 11544
Alignment:
Q  162 ttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||| ||||||||||||||||| | |||||  |||| | |||| | || | ||||| ||| ||||||| ||| ||||||||||||||||||||||||    
T  11446 ttgaaaaagtatgatatagaaaataattttgttg-tatcatccaaggttttgtcattaacgttgctatgttgcaatttgttttatgttgttgtctctgct 11544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 1545 - 1634
Alignment:
Q  153 tatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    |||||||||| |||||||| |||||||||||||||  |||||  |||| |||||||||||||||||||| ||  |||||| |||||||||    
T  1545 tatattatgtggaaaatgtttgatatagaaaatatcgttgttattatcattcaagttgttattattaatattgatatgttgcaagttgtt 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 3192 - 3139
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  3192 cagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacatgatgtt 3139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 33687 - 33573
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || | ||||| ||| | | ||||| ||||||||||||||| ||||| | |||||||||    
T  33687 ttgagatacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-ataccatccaagtggttattattaatgttgctatgattcaagttgtt 33590  T
Q  243 ttatgttgttgtctctg 259  Q
     ||||||| ||||||||    
T  33589 gtatgttgatgtctctg 33573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 1272 - 1363
Alignment:
Q  166 aaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctct 258  Q
    |||||||||||||| |||||||  ||||||||||| |||||||||||||||||||| || |||||||  ||||||  |||||||| |||||||    
T  1272 aaatgtatgatatataaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgtaagttg-cttatgttgctgtctct 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 4938 - 4795
Alignment:
Q  81 ttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatata 179  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||| |  |||||||| |||| ||||| ||||||||||||||  | | ||||| |||||    
T  4938 ttgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgattaatttgagatacatatattatgtgaatattgtataatata 4839  T
Q  180 gaaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
      ||||||| ||||||||||| || || ||||| || ||||||||    
T  4838 -taaatattgttgtttatatcatttaaattgttgttgttaatgtt 4795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 1784 - 1624
Alignment:
Q  82 tgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttgagctacatatattatgttgaaaatgtatgatatag 180  Q
    ||||||||||| ||||||  || |||||||||||||||| |||| |  ||||||||  ||| ||||| |||||||| |||||  | | ||||||||||||    
T  1784 tgtttataattgtattgtcttttagtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatactatgtgaatattgtatgatatag 1685  T
Q  181 aaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
     ||||||| ||||| ||||| ||||| |||||  | ||||||||  |||| | |||||||||    
T  1684 -aaatattgttgttcatatcattcaaattgttgctgttaatgttgttatgatgcaagttgtt 1624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 5065 - 4955
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||| || || ||||||||  |||| | |||||||||    
T  5065 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttattgttgttaatgttgttatgatgcaagttgtt 4967  T
Q  243 ttatgttgttgtc 255  Q
     | ||||||||||    
T  4966 at-tgttgttgtc 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 13249 - 13368
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| |||| |||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  13249 ttgagttacatatatttatgtggaaaaggtataatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatgctatgttgtgaagttg 13347  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || |||||| |||||||||||    
T  13348 ttgtatgttattgtctctgct 13368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 19516 - 19635
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| |||| |||||||||||| | ||||| ||||| ||||||||||||||||||||| | |||||||   ||||||    
T  19516 ttgagttacatatatttatgtggaaaaggtataatatagaaaataatgttgtt-atatcattcaagttgttattattaatgatgctatgttgtgaagttg 19614  T
Q  241 ttttatgttgttgtctctgct 261  Q
    || |||||| |||||||||||    
T  19615 ttgtatgttcttgtctctgct 19635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 9473 - 9562
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| ||||||||||||||||||||||| | |||||||    
T  9473 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-atacctttcaagttgttattattaatgatgctatgtt 9562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 58085 - 57969
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgt-tacaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | ||||||    ||||||    
T  58085 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtcgtgaagttg 57987  T
Q  241 ttttatgttgttgtctct 258  Q
    || |||||||||||||||    
T  57986 ttgtatgttgttgtctct 57969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 545 - 431
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || ||||||| ||| | | ||||| ||||||||||||||||||||| | |||||||||    
T  545 ttgagatacatatattatgtgaatattgtatgatatagaaa-taatattgtt-ataccatccaagtggttattattaatgtttctatgattcaagttgtt 448  T
Q  243 ttatgttgttgtctctg 259  Q
     ||| ||| ||||||||    
T  447 gtatattggtgtctctg 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 259
Target Start/End: Original strand, 75 - 207
Alignment:
Q  115 aattaaaatgattaatgttgttggttaattga-gctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtta 213  Q
    |||||| || ||| |||||||||||||||| | |||||||||||||||| ||||||||||            ||| ||||||||||| ||| ||||||||    
T  75 aattaatataattgatgttgttggttaattcaagctacatatattatgtggaaaatgtat------------attgttgtttatatcattcgagttgtta 162  T
Q  214 ttattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||||| ||| ||||||| ||||||| ||||||||| ||||||||    
T  163 ttattaacgttgctatgttgcaagttg-tttatgttgctgtctctg 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 60573 - 60473
Alignment:
Q  161 gttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgc 260  Q
    |||||||||||||||||| |||| | ||| |||||||||| | |||||||||| ||||||| |  ||||| |  |||||| ||||||||| |||||||||    
T  60573 gttgaaaatgtatgatatggaaattgttagtgtttatatcatccaagttgttagtattaatctggctatgatgtaagttgctttatgttgctgtctctgc 60474  T
Q  261 t 261  Q
    |    
T  60473 t 60473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 146084 - 145960
Alignment:
Q  130 tgttgttggttaatt-gagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttcta 228  Q
    |||||||| |||||| ||| ||||||||||||||  | | ||||||||||||||| || | ||||| ||||| | ||||| ||||||||||||||| |||    
T  146084 tgttgttgattaatttgagatacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-atatcatccaagtggttattattaatgttgcta 145987  T
Q  229 tgttacaagttgttttatgttgttgtc 255  Q
     | | ||||||||| ||||||||||||    
T  145986 cggttcaagttgttgtatgttgttgtc 145960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 21479 - 21419
Alignment:
Q  77 aaagttgtttataattatattgtggttcagtgagtctg-aattaaaatgattaatgttgtt 136  Q
    |||||||||||||||  || ||| |||||| ||||||| |||||| |||||||||||||||    
T  21479 aaagttgtttataatagtaatgttgttcagagagtctgaaattaagatgattaatgttgtt 21419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 112 - 228
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||| | ||| ||||| | || |||||||||||||||||| | |||||||   || |||    
T  112 ttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttg-ttataccatttaagttgttattattaatgatgctatgttgtgaaattg 210  T
Q  241 ttttatgttgttgtctct 258  Q
    || |||||||||||||||    
T  211 ttgtatgttgttgtctct 228  T

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Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 15224 - 15338
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || | || |||||| | | ||||| ||||||||||||||| ||||| | |||||||||    
T  15224 ttgagatacatatattatgtgaatattgtatgatatagaaa-taatgtt-tttataccatccaagtggttattattaatgttgctatgattcaagttgtt 15321  T
Q  243 ttatgttgttgtctctg 259  Q
     ||||||| ||||||||    
T  15322 gtatgttgatgtctctg 15338  T

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Target: scaffold0134 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 9941 - 10019
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaat 221  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||| | ||| || || | ||||||||||||||||||||    
T  9941 ttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttg-ttgtaccattcaagttgttattattaat 10019  T

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Target: scaffold0439 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 11497 - 11381
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgtt 242  Q
    ||||| ||||||||||||||  | | ||||||||||||||| || | ||||| ||| | | ||| | ||||||||||||||| ||||| | |||||||||    
T  11497 ttgaggtacatatattatgtgaatattgtatgatatagaaa-taatgttgtt-ataccatccaaatggttattattaatgttgctatggttcaagttgtt 11400  T
Q  243 ttatgttgttgtctctgct 261  Q
     ||||||||||||| ||||    
T  11399 gtatgttgttgtctgtgct 11381  T

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Target: scaffold0439; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 3790 - 3716
Alignment:
Q  149 tacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtt 224  Q
    ||||||||||||||  | | ||||||||||||||| |||| ||||| ||||| ||||||||||| || ||||||||    
T  3790 tacatatattatgtgaatattgtatgatatagaaa-tattgttgttcatatcattcaagttgttgttgttaatgtt 3716  T

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Target: scaffold0379 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 14432 - 14565
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacgtgatgttctga------ctttggggtaggaatgaaagttgtttataattatattgtggttcag 106  Q
    ||||| |||||||||||||||||||||||||||||||    ||| |||      | ||||||||||||||| ||||||||||| |  || ||| ||||||    
T  14432 caaccttgtttagggttcttgcgatctttgtcgcacgaagagttatgagttggtccttggggtaggaatgagagttgtttatattattaatgttgttcag 14531  T
Q  107 tgagtctgaattaaaatga-ttaatgttgttggt 139  Q
     ||||||| ||||| |||| |||| |||||||||    
T  14532 agagtctggattaagatgatttaaagttgttggt 14565  T

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Target: scaffold0379; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 4428 - 4473
Alignment:
Q  3 cagtggcagtcaaccatgtttagggttcttgcgatctttgtcgcac 48  Q
    ||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  4428 cagtgtcagacaaccttgttttgggttcttgcgatctttgtcgcac 4473  T

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Target: scaffold1551 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1551
Description:

Target: scaffold1551; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 142 - 106
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||| |||||||||||||||||||||||||||||||    
T  142 caaccttgtttagggttcttgcgatctttgtcgcacg 106  T

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Target: scaffold0546 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 7253 - 7198
Alignment:
Q  204 caagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||| ||||||||||||||| ||||| | ||||||||| ||||||| ||||||||    
T  7253 caagtggttattattaatgttgctatgattcaagttgttgtatgttgctgtctctg 7198  T

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Target: scaffold0384 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 232
Target Start/End: Original strand, 8124 - 8190
Alignment:
Q  165 aaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt 232  Q
    |||| ||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | |||||||    
T  8124 aaaaggtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgtt 8190  T

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Target: scaffold0109 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 6054 - 6109
Alignment:
Q  204 caagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctg 259  Q
    ||||| ||||||||||||||| ||||| | ||||||||| ||||||| ||||||||    
T  6054 caagtggttattattaatgttgctatgattcaagttgttgtatgttgctgtctctg 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 8475 - 8440
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtgatg 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8475 tgtttagggttcttgcgatctttgtcgcacgagatg 8440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 10695 - 10746
Alignment:
Q  210 gttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||||||||||||| ||||| |  |||||||| ||||||||||||||||||    
T  10695 gttattattaatgttgctatgattgaagttgttgtatgttgttgtctctgct 10746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 168808 - 168704
Alignment:
Q  149 tacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttacaagttgttttatgt 248  Q
    ||||||||||||||| | | |||||||||| |||| |||| ||||| ||||  ||||||||||| || ||||||||  |||||| ||| ||||| | |||    
T  168808 tacatatattatgttaatattgtatgatattgaaa-tattgttgttcatattattcaagttgttgttgttaatgttgttatgttgcaatttgttat-tgt 168711  T
Q  249 tgttgtc 255  Q
    |||||||    
T  168710 tgttgtc 168704  T

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Target: scaffold1815 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 1294 - 1237
Alignment:
Q  204 caagttgttattattaatgtttctatgttacaagttgttttatgttgttgtctctgct 261  Q
    ||||| ||||||||||||||| ||||| | ||||||||| ||||||| ||||| ||||    
T  1294 caagtggttattattaatgttgctatgattcaagttgttgtatgttgctgtctgtgct 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 1142 - 1210
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  1142 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 502 - 386
Alignment:
Q  143 ttgagctacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgtt-acaagttg 240  Q
    ||||| |||||||||| || | ||||| |||||||||||||||||   || |||||| | ||||||||||||||||||||| |  ||||||   ||||||    
T  502 ttgagttacatatatttatatggaaaaggtatgatatagaaaataacgtt-tttataccattcaagttgttattattaatgatgatatgttgtgaagttg 404  T
Q  241 ttttatgttgttgtctct 258  Q
    || || ||||||||||||    
T  403 ttgtacgttgttgtctct 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 10446 - 10413
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtga 52  Q
    ||||||||||||||| ||||||||||||||||||    
T  10446 tgtttagggttcttgtgatctttgtcgcacgtga 10413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 17797 - 17760
Alignment:
Q  19 tgtttagggttcttgcgatctttgtcgcacgtgatgtt 56  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  17797 tgtttagagttcttgcgatctttgtcgcacgagatgtt 17760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 33315 - 33250
Alignment:
Q  78 aagttgtttataattat-attgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||||| | |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  33315 aagttgtttataattattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 33250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 15261 - 15329
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  15261 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 15329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 24319 - 24387
Alignment:
Q  143 ttgagctacatatattatgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgtt 212  Q
    ||||| ||||||||||||||  | | |||||||||||| ||||||| ||||| ||||| |||||||||||    
T  24319 ttgagatacatatattatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 24387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 176189 - 176125
Alignment:
Q  78 aagttgtttataattatattgtggttcagtgagtctgaa-ttaaaatgattaatgttgttggtta 141  Q
    ||||||||||||||  || |||  ||||| ||||||||| |||| ||||||||||||||||||||    
T  176189 aagttgtttataatattaatgttcttcagagagtctgaaattaagatgattaatgttgttggtta 176125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 446793 - 446757
Alignment:
Q  13 caaccatgtttagggttcttgcgatctttgtcgcacg 49  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  446793 caaccttgtttaggattcttgcgatctttgtcgcacg 446757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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