View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14117_low_93 (Length: 234)
Name: NF14117_low_93
Description: NF14117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14117_low_93 |
 | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
| [»] scaffold0100 (1 HSPs) |
| | |
|
| [»] scaffold1240 (1 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 8220495 - 8220290
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8220495 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
8220396 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8220395 |
ggtaccggatgcaaaagtacgttttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
8220296 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
8220295 |
tatatc |
8220290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 633065 - 632860
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
633065 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
632966 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
632965 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
632866 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
632865 |
tatatc |
632860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 6379021 - 6379226
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6379021 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
6379120 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6379121 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
6379220 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
6379221 |
tatatc |
6379226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 17959782 - 17959987
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17959782 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
17959881 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17959882 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
17959981 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
17959982 |
tatatc |
17959987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 34840132 - 34839927
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34840132 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
34840033 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34840032 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
34839933 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
34839932 |
tatatc |
34839927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 24931782 - 24931986
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
24931782 |
agaaaatattttaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctaaatacgacgatgcaatgtttcgtcgtc |
24931881 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
24931882 |
ggtaccggatgcaaaaacacgttttccttcgaatcgtttgagacctttcaagtagtgataactacttcacccaacgagttgatgcaaccaataaagaagg |
24931981 |
T |
|
| Q |
212 |
tatat |
216 |
Q |
| |
|
||||| |
|
|
| T |
24931982 |
tatat |
24931986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 18640954 - 18640810
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
18640954 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgacgactacttggccaatgagcctacatacgacgattcaatgtttcgtcgtc |
18640855 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacc |
156 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
18640854 |
ggtaccggatgcaaaaacacgttttccttcgaattgttggagacc |
18640810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 8469864 - 8469664
Alignment:
| Q |
17 |
atatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgatac |
116 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8469864 |
atatttaaatagagatcatgcagtggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgatac |
8469765 |
T |
|
| Q |
117 |
cggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaaggtatat |
216 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
8469764 |
cagatgcaaaaacacgttttccttcgaatcgttgaagacctttcaagtagtgataactacttcacctaacgagttgatgccgccaacaaagaaggtatat |
8469665 |
T |
|
| Q |
217 |
c |
217 |
Q |
| |
|
| |
|
|
| T |
8469664 |
c |
8469664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 2476847 - 2477052
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2476847 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
2476946 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2476947 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
2477046 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
2477047 |
tatatc |
2477052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 31469676 - 31469471
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31469676 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
31469577 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31469576 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
31469477 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
31469476 |
tatatc |
31469471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 45240689 - 45240484
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45240689 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
45240590 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45240589 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
45240490 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
45240489 |
tatatc |
45240484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 48386626 - 48386831
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48386626 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
48386725 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48386726 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
48386825 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
48386826 |
tatatc |
48386831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 48405873 - 48405668
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48405873 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
48405774 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48405773 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
48405674 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
48405673 |
tatatc |
48405668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 31 - 217
Target Start/End: Original strand, 47299038 - 47299224
Alignment:
| Q |
31 |
atcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgataccggatgcaaaaaca |
130 |
Q |
| |
|
|||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
47299038 |
atcatgtagcagcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcggtactggatgcaaaaaca |
47299137 |
T |
|
| Q |
131 |
cgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaaggtatatc |
217 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47299138 |
cgttttccttcgaatcgttggagaactttcaattagtgataactacttcacccagcgagttgatgccgccaacaaagaaggtatatc |
47299224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 17679784 - 17679989
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
17679784 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgatgttgcaatgtttcgtcgtc |
17679883 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||| |||| ||||||| |||| | |||||||||||||| | ||||||| ||||||||||| |||| |
|
|
| T |
17679884 |
ggtaccggatgcaaaaacacgttttccttcgaattgttagagaactttcaattagtcataactacttcacccaacaagttgattccgccaacaaaaaagg |
17679983 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
17679984 |
tatatc |
17679989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 17784912 - 17784707
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
17784912 |
agaaaatatttcaatagagatcatgcagcagcaaaccgaagactaattgacgactactttgccaatgagcctacatacgacgatgcaatgtttcgtcatc |
17784813 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
17784812 |
ggtaccggatgcaaaaatctgttttcctttgaatcgttggagacctttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
17784713 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
17784712 |
tatatc |
17784707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 51521736 - 51521536
Alignment:
| Q |
17 |
atatttaaatagagatcatgcagcgg-caaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgata |
115 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
51521736 |
atatttcaatagagatcatg-agcgggcaaaccaaagactaattgacgactacttttccaatgagcctacatatgacgatgcaatctttcgtcgtcggta |
51521638 |
T |
|
| Q |
116 |
ccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaaggtata |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||| |
|
|
| T |
51521637 |
ccggatgcaaaaacacgttttccttcgaattattggagaccattcaagtagtgataactacttcacctagcgagttgatgcagccaataaagaaggtata |
51521538 |
T |
|
| Q |
216 |
tc |
217 |
Q |
| |
|
|| |
|
|
| T |
51521537 |
tc |
51521536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 33165919 - 33165714
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
33165919 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatacgacgatgcaatgtttcgttgtc |
33165820 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||| ||| |||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||| ||||||||||| ||| | |||||| |
|
|
| T |
33165819 |
ggtacctgatacaaaaacacgttttccttcgaatcattggagacctttcgagtggtgataactacttcacccaacgagttgatgcaaacaaaatagaagg |
33165720 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
33165719 |
tatatc |
33165714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 15055184 - 15054979
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15055184 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
15055085 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15055084 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
15054985 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
15054984 |
tatatc |
15054979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 1956741 - 1956946
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1956741 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatggcgatgcaatgtttcgtcgtc |
1956840 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1956841 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
1956940 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
1956941 |
tatatc |
1956946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 13816486 - 13816281
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
13816486 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatacgatgatgcaatgtttcgtcgtc |
13816387 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
13816386 |
ggtaccggatgcaaaaacatgttttccttcgaatcgttggagacctttcatgtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
13816287 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
13816286 |
tatatc |
13816281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 17743236 - 17743031
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17743236 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
17743137 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || | ||||||||| ||||| ||| |||| |
|
|
| T |
17743136 |
ggtactggatgcaaaaacacgttttccttcgaatcgttggagatctttcaagtagtgataactacttcactcaactagttgatgcagccaataaataagg |
17743037 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
17743036 |
tatatc |
17743031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 30531068 - 30531273
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30531068 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgatgactactttgccaatgagcctacatacgacgatgcaatgtttcgtcgtc |
30531167 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
30531168 |
ggtaccggatgcgaaaacacgttttccttcgaatcgttggagacctatcaagtattgataactacttcacccaacgagttgatgcagccaataaagaagg |
30531267 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
30531268 |
tatatc |
30531273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 174; Significance: 9e-94; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 22192758 - 22192553
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22192758 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
22192659 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22192658 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
22192559 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
22192558 |
tatatc |
22192553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 36520057 - 36519852
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36520057 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
36519958 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36519957 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
36519858 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
36519857 |
tatatc |
36519852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 22658225 - 22658020
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
22658225 |
agaaaatatttaaatagagatcatgcagcgacaaaccaaagactcattgacgactactttgccaacgagcctacatatgacgatccaatgtttcgtcgtc |
22658126 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22658125 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
22658026 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
22658025 |
tatatc |
22658020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 26813686 - 26813481
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
26813686 |
agaaaatattttaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacataggacgatacaatgtttcgtcgtc |
26813587 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||| |
|
|
| T |
26813586 |
tgtaccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgataactacttcacccaacgagttgatgcagccaataaataagg |
26813487 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
26813486 |
tatatc |
26813481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 32128765 - 32128970
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||| |
|
|
| T |
32128765 |
agaaaatattttaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgctaatgagcctacatacgacaatgcaatatttcgtcgtc |
32128864 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
32128865 |
ggtaccggatgcaaaaacatgttttccttcgaatcgttggagacctttcaagtagtgataactacttcacccaacgagttgatgcagccaataaagaagg |
32128964 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
32128965 |
tatatc |
32128970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 32975088 - 32975293
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32975088 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
32975187 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32975188 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
32975287 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
32975288 |
tatatc |
32975293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 29618120 - 29618325
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29618120 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
29618219 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||| ||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29618220 |
ggtaccgggtgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
29618319 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
29618320 |
tatatc |
29618325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 40890448 - 40890243
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40890448 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
40890349 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
40890348 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccaacgagttgatgccgccaacaaagaagg |
40890249 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
40890248 |
tatatc |
40890243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 27944043 - 27943838
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27944043 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtctcgtcgtc |
27943944 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27943943 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgctaacaaagaagg |
27943844 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
27943843 |
tatatc |
27943838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 9273792 - 9273997
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9273792 |
agaaaatatttcaatagagatcatggagcggcaaaccaaagaataattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
9273891 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| ||||| | |||||| |
|
|
| T |
9273892 |
ggtaccggatgcaaaaacacgttttccttcgaatcgttaaagacctttcaagtagtgataactatttcacccagcgagttgatgcagccaatatagaagg |
9273991 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
9273992 |
tatatc |
9273997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 4578544 - 4578339
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||||| |||||||||||| | ||||| |||||||||||| ||| |||||||| |||||||||||||||||||||| |
|
|
| T |
4578544 |
agaaaatatttcaatagagatcatgcagctgcaaaccaaagactaattgatgactactttgccgatgcacctacatacgacgatgcaatgtttcgtcgtc |
4578445 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
4578444 |
ggtatcggatgcaaaaacatgttttccttcgaatcgttggagatctttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
4578345 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
4578344 |
tatatc |
4578339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 30647013 - 30647143
Alignment:
| Q |
87 |
tatgacgatgcaatgtttcgtcgtcgataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||| |
|
|
| T |
30647013 |
tatgacgatgcaatgtttcgtcgtcggtaccggatgcaaaagcacgttttcattcgaatcgttgtagacctttcaattagtgataactacttcacccaat |
30647112 |
T |
|
| Q |
187 |
gagttgatgccgccaacaaagaaggtatatc |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |
|
|
| T |
30647113 |
gagttgatgctgccaacaaagaaggtatatc |
30647143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 31012486 - 31012583
Alignment:
| Q |
120 |
atgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaaggtatatc |
217 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31012486 |
atgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaaggtatatc |
31012583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 2213807 - 2214012
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2213807 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
2213906 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2213907 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
2214006 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
2214007 |
tatatc |
2214012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 3616972 - 3617177
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3616972 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
3617071 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3617072 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
3617171 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
3617172 |
tatatc |
3617177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 8993337 - 8993132
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8993337 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
8993238 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8993237 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
8993138 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
8993137 |
tatatc |
8993132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 13112115 - 13111910
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13112115 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
13112016 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13112015 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
13111916 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
13111915 |
tatatc |
13111910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 46916034 - 46916239
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46916034 |
agaaaatatttaaatagagatcatgcaggggcaaaccaaagactcattgccgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
46916133 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46916134 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
46916233 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
46916234 |
tatatc |
46916239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 3531827 - 3532032
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3531827 |
agaaaatatctaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
3531926 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || |||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3531927 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggaggcctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
3532026 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
3532027 |
tatatc |
3532032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 16173538 - 16173743
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16173538 |
agaaaatatttaaatagagatcatgcagaagcaaaccaaagactcattgacgactactttgccaatgagcctatatatgacgatgcaatgtttcgtcgtc |
16173637 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
16173638 |
ggtaccggatgcaaaaacacgttttcattcgaatcgttggagacctttcaattagtgataactacttcacctagcgagttgatgccgccaacaaaaaagg |
16173737 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
16173738 |
tatatc |
16173743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 33605684 - 33605479
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||| | |||||||||| |||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
33605684 |
agaaaatatttaaatagagatcatgcagcggaaaaccaaagactaattgacgactgctttgccaatgagcgtacatacgacgatgcaatgtttcgtcgtc |
33605585 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||| ||||||| ||||| |||||||| |
|
|
| T |
33605584 |
ggtaccggatgcaaaaacatgttttccttcgaatcgttggagaccattcaagtagtgataactacttcgcccaacgatttgatgcagccaataaagaagg |
33605485 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
33605484 |
tatatc |
33605479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 34436662 - 34436867
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||||| |||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
34436662 |
agaaaatatttcaatagagatcatgcagcagcaaaccaaagactaattgacggctactttgccaatgagcctacatacgacgatgcaatgtttcgtcacc |
34436761 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||| ||||||| |||||||||| ||||| |||||||| |
|
|
| T |
34436762 |
ggtaccggatgcaaaaacacgttttcctttaaattgttggagacctttcaagttgtgataactacctcacccaacgagttgatgtagccaataaagaagg |
34436861 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
34436862 |
tatatc |
34436867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 53182734 - 53182834
Alignment:
| Q |
117 |
cggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaaggtatat |
216 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||||| ||||||||||||| |
|
|
| T |
53182734 |
cggatgcaaaaacatgttttccttcgaatagttggagatctttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaaggtatat |
53182833 |
T |
|
| Q |
217 |
c |
217 |
Q |
| |
|
| |
|
|
| T |
53182834 |
c |
53182834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 174; Significance: 9e-94; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 17468065 - 17467860
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17468065 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
17467966 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17467965 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
17467866 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
17467865 |
tatatc |
17467860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 25789299 - 25789504
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25789299 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
25789398 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25789399 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
25789498 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
25789499 |
tatatc |
25789504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 25831256 - 25831461
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25831256 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
25831355 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25831356 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
25831455 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
25831456 |
tatatc |
25831461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 30416948 - 30417153
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30416948 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
30417047 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30417048 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
30417147 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
30417148 |
tatatc |
30417153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 47145716 - 47145511
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47145716 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
47145617 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47145616 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
47145517 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
47145516 |
tatatc |
47145511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 6047214 - 6047419
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6047214 |
agaaaatatctaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
6047313 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6047314 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatcccgccaacaaagaagg |
6047413 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
6047414 |
tatatc |
6047419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 33189364 - 33189569
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33189364 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
33189463 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33189464 |
ggtaccggatgcaaaatcatgttttccttcgaatctttggagatctttcaattattgataactacttcacccagcgagttgatgccgccaacaaagaagg |
33189563 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
33189564 |
tatatc |
33189569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 30689639 - 30689844
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
30689639 |
agaaaatatttcaatagagatcatgcaacggcaaaccaaagactaattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcatc |
30689738 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
30689739 |
ggtacctgatgcaaaaacacgttttccttcgaatcattggagacctttcaagtagtgataactacttcacccagcgagttgatgcagccaataaagaagg |
30689838 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
30689839 |
tatatc |
30689844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 42562452 - 42562247
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
42562452 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcgttgatgactactttgccaatgagcctacatacgacgatgcaatgtttcgtcgtc |
42562353 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||| |||| || |||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
42562352 |
ggtaccggatgtaaaagcatcttttccttcgaatcgttggagacctttcaattactgataactacttcacccaacgagttgatgccgccaacaaagaagg |
42562253 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
42562252 |
tatatc |
42562247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 51428641 - 51428436
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
51428641 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatacgaagatgcaatgtttcgtcgtc |
51428542 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
51428541 |
ggtaccggatgcaaaaacatgttttccttcgaaacgttggagatctttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
51428442 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
51428441 |
tatatc |
51428436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 50018540 - 50018335
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
50018540 |
agaaaatatttcaatagagatcatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatacaacgatataatgtttcgtcgtc |
50018441 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||||| |||| |||||||| |
|
|
| T |
50018440 |
ggtaccggatacaaaaacacgttttccttcgaatcgttggagaccttttaagtagtgataactacttcacccaacgaattgatgcaaccaataaagaagg |
50018341 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
50018340 |
tatatc |
50018335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 33750230 - 33750026
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33750230 |
agaaaatatttcaatagagatcatgcagcggaaaaccaaagactaattaacgactactttgccaatgagcctacatacgacgatgcaatgtttcgtcgtc |
33750131 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
33750130 |
ggtaccggatgcaaaaatacgtttttcttcgaatcgttggaga-ttttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
33750032 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
33750031 |
tatatc |
33750026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 42600037 - 42600242
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||||| |||||||||||| | ||||| |||||||||||| ||| |||||||| |||||||||||||||||||||| |
|
|
| T |
42600037 |
agaaaatatttcaatagagatcatgcagctgcaaaccaaagactaattgatgactactttgccgatgcacctacatacgacgatgcaatgtttcgtcgtc |
42600136 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
42600137 |
ggtatcggatgcaaaaacatgttttccttcgaatcgttggagatctttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
42600236 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
42600237 |
tatatc |
42600242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 21226802 - 21226657
Alignment:
| Q |
24 |
aatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgataccggatgc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
21226802 |
aatagagatcatgcagcggcaaaccaaagactaattaacgactactttgccaataagcctacatatgacgatgcaatgtttcgtcgtcggtaccaaatgc |
21226703 |
T |
|
| Q |
124 |
aaaaacacgttttccttcgaatcgttggagacctttcaagtagtga |
169 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
21226702 |
aaaaacatgttttccttcgaatcgttggggacatttcaagaagtga |
21226657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 21230966 - 21231111
Alignment:
| Q |
24 |
aatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgataccggatgc |
123 |
Q |
| |
|
|||||| || |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
21230966 |
aatagatattatgcagcggcgaaccaaagactaattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcatcgtcagtaccggatgt |
21231065 |
T |
|
| Q |
124 |
aaaaacacgttttccttcgaatcgttggagacctttcaagtagtga |
169 |
Q |
| |
|
||||||| |||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
21231066 |
aaaaacatgttttccttcaaatcgttggggacctttcaagtagtga |
21231111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 7587021 - 7587226
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7587021 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
7587120 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7587121 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
7587220 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
7587221 |
tatatc |
7587226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 12856568 - 12856363
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12856568 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
12856469 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12856468 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
12856369 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
12856368 |
tatatc |
12856363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 30821101 - 30821306
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30821101 |
agaaaatatttaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
30821200 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30821201 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgccgccaacaaagaagg |
30821300 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
30821301 |
tatatc |
30821306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 8853606 - 8853401
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8853606 |
agaaaatatttaaagagagatcatgcaggggcaaaccaaagactcattgacgactactttaccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
8853507 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8853506 |
ggtaccggatgcaaaaacatgtcttccttcgaatcgttggagacctttcaagtagtgataactacttcacccagcgagttgatgccgccaacaaagaagg |
8853407 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
8853406 |
tatatc |
8853401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 22350132 - 22350337
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22350132 |
agaaaatatctaaatagagatcatgcagcggcaaaccaaagactcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
22350231 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22350232 |
ggtaccggatgcaaaagcatgttttccttcgaatcgttggagacctttcaattactgataactacttcacccagcgagttgatgcctccaacaaagaagg |
22350331 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
22350332 |
tatatc |
22350337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 40880257 - 40880462
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
40880257 |
agaaaatatttcaatagagatcatgtagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatacgatgatgcaatgtttcgtcgtc |
40880356 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||| ||| |||| |
|
|
| T |
40880357 |
ggtaccggatgcaaaaacatgttttccttcgaatcgttggagacctttcaagtagtgataactacttcacccaacaagttgatgcagccaataaaaaagg |
40880456 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
40880457 |
tatatc |
40880462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 31206430 - 31206634
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31206430 |
agaaaatatttcaatagagatcatgtagcggaaaactaaagactaattgacgactactttgccaatgagcctacatatgacgatgcaatgttttgtcgtc |
31206529 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| || ||||||| ||||| |||||||| |
|
|
| T |
31206530 |
ggtacctgatgcaaaaatacgttttccatcgaatcgttggagacctttcaagtagtgataactagttcacccaacg-gttgatgaagccaataaagaagg |
31206628 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
31206629 |
tatatc |
31206634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 104392 - 104187
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
104392 |
agaaaatattttaatagagattatgcagcggcaaaccaaagactaattgacgactactttgccaatgagcctacatacgacgatgcaatgtttcgtcgtc |
104293 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
104292 |
ggtacctgatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgataactacttcacccaacgagttgatgcagccaataaagaagg |
104193 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
104192 |
tatatc |
104187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 29067 - 29272
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| ||||||||||||||||||| |||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29067 |
agaaaatatttcaatagagatcatgcagcggaaaaccaaagactaattgacgactaatttgccaatgagcctacatacgacgatgcaatgtttcgtcgtc |
29166 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
29167 |
ggtaccggatgcaaaaacacgtttttcttcgaatcgttggagacctttcaagtagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
29266 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
29267 |
tatatc |
29272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1240 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold1240
Description:
Target: scaffold1240; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 1291 - 1496
Alignment:
| Q |
12 |
agaatatatttaaatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtc |
111 |
Q |
| |
|
|||| |||||| |||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1291 |
agaaaatatttcaatagagatcatgcagtggcaaaccaaagactaattgacgactactttgccaatgagcctacatacgacgatgcaatgtttcgtcgtc |
1390 |
T |
|
| Q |
112 |
gataccggatgcaaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaagg |
211 |
Q |
| |
|
| ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
|
|
| T |
1391 |
ggtaccggaggcaaaaacacgttttccttcaaatcgttggagacctttcaagcagtgataactacttcacccaacgaattgatgcagccaataaagaagg |
1490 |
T |
|
| Q |
212 |
tatatc |
217 |
Q |
| |
|
|||||| |
|
|
| T |
1491 |
tatatc |
1496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 167773 - 167966
Alignment:
| Q |
24 |
aatagagatcatgcagcggcaaaccaaagaatcattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgtcgataccggatgc |
123 |
Q |
| |
|
||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
167773 |
aatagagatcatgcagcggaaaaccaaagactaattgacgactactttgccaatgagcctacatatgacgatgcaatgtttcgtcgttggtaccggatgc |
167872 |
T |
|
| Q |
124 |
aaaaacacgttttccttcgaatcgttggagacctttcaagtagtgacaactacttcacccagcgagttgatgccgccaacaaagaaggtatatc |
217 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||| |
|
|
| T |
167873 |
aaaaacatgttttccttcgaatcgttggggacctttcaagtagtgatgactacttcacccagcaagttgatgcagccaataaagaaggtatatc |
167966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University