View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14118_high_34 (Length: 244)
Name: NF14118_high_34
Description: NF14118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14118_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 228
Target Start/End: Original strand, 5894932 - 5895147
Alignment:
| Q |
14 |
gaaacaatactactcaataattgtctacaacctaggct-ttgttaggaccagtcataacaaactcataaagcttaacagcatccttaagcattttcttca |
112 |
Q |
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| T |
5894932 |
gaaacaatactactcaatagatttctacaacctaggttcttgttaggaccagccataacaaactcataaagcttcacagcatccttaagcattttcttca |
5895031 |
T |
|
| Q |
113 |
aaataaagctttcatgaaaggaaagataggtattttctcctatcttgaatccagcactcctcatatcataaactaacttccaaaactgatcaatcaaata |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5895032 |
aaataaagctttcatgaaaggaaagataggtattttctcctatcttgaatccagcactcctcatatcataaactaacttccaaaactgatcaatcaaata |
5895131 |
T |
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| Q |
213 |
ctcgctttgaagaatc |
228 |
Q |
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|||||||||||||||| |
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| T |
5895132 |
ctcgctttgaagaatc |
5895147 |
T |
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