View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14118_low_44 (Length: 235)
Name: NF14118_low_44
Description: NF14118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14118_low_44 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 14304264 - 14304043
Alignment:
| Q |
1 |
gtgacaacacggtggagaatactccggcgtttacatttacgaattaaagttaaagcgcgatcaagattcttggcggcttcagcggcgacacggcggacgg |
100 |
Q |
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| T |
14304264 |
gtgacaacacggtggagaatactccggcgtttacatttacgaattaaagttaaagcgcgttcaagattcttggcggcttcagcggcgacacggcggacgg |
14304165 |
T |
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| Q |
101 |
gacgttcgtaaagcggcggaggagcggtggcggcgaatcggacgagtgtacggagcatttgaaggaggcgttcgacgtgtttccagacttcggagcattc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
14304164 |
gacgttcgtaaagcggcggaggagcggtggcggcgaatcggacgagtgtacggagcatttgaaggagacgttcgacgtgtttccagacttcggagcattc |
14304065 |
T |
|
| Q |
201 |
gagtttgaaggaatcggtttct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
14304064 |
gagtttgaaggaatcggtttct |
14304043 |
T |
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