View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14118_low_47 (Length: 216)
Name: NF14118_low_47
Description: NF14118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14118_low_47 |
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Alignment Details
Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 36970413 - 36970240
Alignment:
| Q |
1 |
caattaaaatgaacaaacactaaacaataataatggaaacataattatcttaaaccaaaaggataaaacatacatcctgtaggattgtaggttggactca |
100 |
Q |
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| T |
36970413 |
caattaaaatgaacaaacactaaacaataataatggaaacataattatcttaaaccaaaaggataaa-catacatcctgtaggattgtaggttggactca |
36970315 |
T |
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| Q |
101 |
aagcaacaatacataataataaggaaaagtaaacaacaaaacactgacgaaagacataaaggaaacaaacataaa |
175 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
36970314 |
aagcaacaatacataataataaggaaaagtaaacaacaaaacaccgacgaaagacataaaggaaacaaacataaa |
36970240 |
T |
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