View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14118_low_6 (Length: 505)
Name: NF14118_low_6
Description: NF14118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14118_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 469; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 1 - 497
Target Start/End: Original strand, 26472582 - 26473078
Alignment:
| Q |
1 |
gctagaacgaagcataaacaaggtcaaccatattcagcttataagttaattagttcactcatattcgagtataaaccagttggttggatgtatcaagaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
26472582 |
gctagaacgaagcataaacaaggtcaaccatattcagcttataagttaattagttcactcatattcgagtataaaccagtcggttggatgtatcaagaga |
26472681 |
T |
|
| Q |
101 |
gagcattgtacaatatgggaagagaaaaaggttttgatttggattttgcaactcaactcgatccttcactttcatttccgtataaatatagagcattgga |
200 |
Q |
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| T |
26472682 |
gagcattgtacaatatgggaagagaaaaaggttttgatttggattttgcaactcaactcgatccttcactttcatttccgtataaatatagagcattgga |
26472781 |
T |
|
| Q |
201 |
gaaagtcgaggagaagcaaataaaggaagggattatggagttagataagtttctaggatttaagctttcaccggattgtttagagttgagggcttggttg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| || |
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| T |
26472782 |
aaaagtcgaggagaagcaaataaaggaagggattatggagttagataagtttctaggatttaagctttcacctgattgtttagagttgagggcatggctg |
26472881 |
T |
|
| Q |
301 |
tatattgcattagatgattatgatagtgctataagagatattagagctttgttaaccatagaggctaattacataactttacatgggaggattaaaggcg |
400 |
Q |
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| T |
26472882 |
tatattgcattagatgactatgatagtgctataagagatattagagctttgttaaccatagaggctaattacataactttacatgggaggattaaaggcg |
26472981 |
T |
|
| Q |
401 |
aatgcttggttcaaattcttaaaagtaagattcacaagaagaatcaggcggattgttggatgcaattataccaacaatggtcttcagttgatgatgt |
497 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26472982 |
aatgcttggttcaaattcttaaaagtaagattcagaagaagaatcaggcggattgttggatgcaattataccaacaatggtcttcagttgatgatgt |
26473078 |
T |
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