View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1411_low_10 (Length: 346)

Name: NF1411_low_10
Description: NF1411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1411_low_10
NF1411_low_10
[»] chr6 (35 HSPs)
chr6 (7-345)||(35015036-35015374)
chr6 (7-345)||(19983171-19983508)
chr6 (32-346)||(18583380-18583694)
chr6 (27-324)||(26089793-26090091)
chr6 (27-324)||(18002395-18002693)
chr6 (27-324)||(23994981-23995279)
chr6 (27-324)||(15742120-15742417)
chr6 (82-323)||(4991186-4991427)
chr6 (59-328)||(15889601-15889871)
chr6 (82-328)||(22585441-22585688)
chr6 (82-328)||(22590272-22590519)
chr6 (59-324)||(25640456-25640720)
chr6 (58-300)||(15004831-15005072)
chr6 (85-231)||(32276756-32276902)
chr6 (8-103)||(13014822-13014917)
chr6 (8-98)||(25744331-25744421)
chr6 (8-103)||(22440973-22441068)
chr6 (8-103)||(32898829-32898924)
chr6 (85-216)||(19629447-19629578)
chr6 (87-212)||(26512260-26512385)
chr6 (87-212)||(26517376-26517501)
chr6 (82-194)||(16300010-16300122)
chr6 (82-194)||(18823417-18823529)
chr6 (82-194)||(18839272-18839384)
chr6 (98-194)||(21931333-21931429)
chr6 (125-219)||(17374924-17375018)
chr6 (43-103)||(18570353-18570413)
chr6 (27-103)||(18777204-18777280)
chr6 (32-103)||(31628331-31628402)
chr6 (43-103)||(18432717-18432777)
chr6 (292-325)||(1650020-1650053)
chr6 (129-194)||(19175311-19175376)
chr6 (129-193)||(16136423-16136487)
chr6 (292-324)||(16232199-16232231)
chr6 (292-324)||(19610325-19610357)
[»] chr2 (40 HSPs)
chr2 (7-345)||(22274760-22275098)
chr2 (7-345)||(22283993-22284331)
chr2 (43-324)||(9652796-9653077)
chr2 (27-324)||(21273949-21274246)
chr2 (82-323)||(25213162-25213403)
chr2 (82-341)||(15633327-15633586)
chr2 (59-324)||(7321607-7321872)
chr2 (8-129)||(23836791-23836913)
chr2 (8-129)||(25876006-25876127)
chr2 (8-103)||(32465897-32465992)
chr2 (8-129)||(6879476-6879597)
chr2 (129-246)||(20279571-20279688)
chr2 (82-232)||(28031230-28031380)
chr2 (82-232)||(33128158-33128308)
chr2 (82-194)||(24826748-24826860)
chr2 (292-345)||(19794608-19794661)
chr2 (292-345)||(20627217-20627270)
chr2 (82-187)||(17204445-17204550)
chr2 (292-345)||(43642860-43642913)
chr2 (32-103)||(271233-271304)
chr2 (32-103)||(36890798-36890869)
chr2 (32-103)||(4448246-4448317)
chr2 (32-103)||(25602087-25602158)
chr2 (8-103)||(28974088-28974183)
chr2 (287-328)||(19666843-19666884)
chr2 (292-325)||(19689314-19689347)
chr2 (117-194)||(25595168-25595245)
chr2 (292-324)||(463043-463075)
chr2 (292-324)||(3798520-3798552)
chr2 (292-324)||(8944153-8944185)
chr2 (292-324)||(12635785-12635817)
chr2 (292-324)||(12641559-12641591)
chr2 (292-324)||(12728699-12728731)
chr2 (292-324)||(14906354-14906386)
chr2 (292-324)||(16935900-16935932)
chr2 (292-324)||(17006560-17006592)
chr2 (292-324)||(22863235-22863267)
chr2 (292-324)||(23820388-23820420)
chr2 (292-324)||(36982364-36982396)
chr2 (292-324)||(42177886-42177918)
[»] chr7 (45 HSPs)
chr7 (7-345)||(126453-126791)
chr7 (8-346)||(111147-111485)
chr7 (8-345)||(32493925-32494262)
chr7 (7-341)||(1936900-1937217)
chr7 (17-324)||(42056188-42056496)
chr7 (34-324)||(2028986-2029276)
chr7 (43-324)||(2190085-2190367)
chr7 (27-324)||(3049641-3049937)
chr7 (185-320)||(15516765-15516901)
chr7 (85-276)||(39291457-39291648)
chr7 (82-322)||(13352065-13352306)
chr7 (8-99)||(39046740-39046831)
chr7 (125-245)||(15977820-15977940)
chr7 (8-127)||(35094856-35094974)
chr7 (27-129)||(44865288-44865391)
chr7 (20-129)||(47289832-47289942)
chr7 (33-129)||(143703-143800)
chr7 (20-103)||(12759038-12759121)
chr7 (82-187)||(371203-371308)
chr7 (293-346)||(7283934-7283987)
chr7 (27-103)||(3895083-3895159)
chr7 (129-269)||(18151259-18151399)
chr7 (95-194)||(8563369-8563468)
chr7 (8-103)||(11287456-11287551)
chr7 (292-345)||(3060271-3060324)
chr7 (32-103)||(15822544-15822615)
chr7 (145-219)||(17984753-17984827)
chr7 (290-335)||(13377849-13377894)
chr7 (32-103)||(7284173-7284244)
chr7 (32-103)||(12369953-12370024)
chr7 (32-103)||(26070377-26070448)
chr7 (32-103)||(26094164-26094235)
chr7 (145-191)||(15575874-15575920)
chr7 (287-324)||(25124445-25124482)
chr7 (292-324)||(7293333-7293365)
chr7 (292-324)||(11516544-11516576)
chr7 (292-324)||(13758677-13758709)
chr7 (292-324)||(14113903-14113935)
chr7 (292-324)||(15441478-15441510)
chr7 (292-324)||(15862226-15862258)
chr7 (292-324)||(15927875-15927907)
chr7 (292-324)||(16212071-16212103)
chr7 (292-324)||(18979938-18979970)
chr7 (292-324)||(30262043-30262075)
chr7 (292-324)||(36052971-36053003)
[»] scaffold0184 (1 HSPs)
scaffold0184 (7-345)||(31159-31497)
[»] scaffold0078 (2 HSPs)
scaffold0078 (7-345)||(41347-41685)
scaffold0078 (292-324)||(36980-37012)
[»] scaffold0034 (3 HSPs)
scaffold0034 (8-346)||(79903-80241)
scaffold0034 (32-103)||(46228-46299)
scaffold0034 (7-103)||(40696-40792)
[»] chr3 (72 HSPs)
chr3 (7-345)||(17955863-17956201)
chr3 (7-324)||(30152980-30153297)
chr3 (8-346)||(7854021-7854359)
chr3 (8-345)||(45581670-45582008)
chr3 (8-346)||(54038002-54038340)
chr3 (8-323)||(54685202-54685517)
chr3 (8-324)||(33341920-33342236)
chr3 (27-345)||(3992608-3992926)
chr3 (27-324)||(53771099-53771397)
chr3 (27-345)||(2844249-2844567)
chr3 (27-324)||(23492431-23492728)
chr3 (27-324)||(16261511-16261809)
chr3 (27-324)||(38167972-38168269)
chr3 (69-324)||(28558271-28558526)
chr3 (105-345)||(55513006-55513246)
chr3 (82-324)||(18970034-18970277)
chr3 (85-335)||(15550714-15550964)
chr3 (82-247)||(48421690-48421855)
chr3 (8-103)||(16996172-16996267)
chr3 (8-103)||(317621-317716)
chr3 (8-103)||(19570801-19570896)
chr3 (8-103)||(50112164-50112259)
chr3 (8-103)||(12349843-12349938)
chr3 (8-129)||(22144358-22144480)
chr3 (8-127)||(6154419-6154539)
chr3 (82-232)||(19946812-19946962)
chr3 (8-103)||(13817554-13817646)
chr3 (129-217)||(14177017-14177105)
chr3 (11-129)||(6146832-6146951)
chr3 (125-269)||(17393590-17393735)
chr3 (131-277)||(11402752-11402898)
chr3 (82-232)||(14285075-14285225)
chr3 (8-129)||(16182032-16182153)
chr3 (82-194)||(8275874-8275986)
chr3 (82-194)||(9303129-9303241)
chr3 (129-219)||(12539066-12539156)
chr3 (50-108)||(34439451-34439509)
chr3 (82-187)||(16934010-16934115)
chr3 (292-345)||(19232089-19232142)
chr3 (82-194)||(8268774-8268886)
chr3 (32-103)||(12349652-12349723)
chr3 (43-129)||(53898541-53898628)
chr3 (33-103)||(54424076-54424146)
chr3 (292-345)||(15857142-15857195)
chr3 (43-103)||(17100727-17100787)
chr3 (43-103)||(17101412-17101472)
chr3 (27-103)||(19260952-19261028)
chr3 (32-103)||(35123759-35123830)
chr3 (148-219)||(37915290-37915361)
chr3 (33-103)||(14298485-14298555)
chr3 (33-103)||(14304112-14304182)
chr3 (292-345)||(16744020-16744073)
chr3 (114-194)||(38375718-38375798)
chr3 (32-103)||(17523002-17523073)
chr3 (85-194)||(10913001-10913111)
chr3 (287-328)||(13301360-13301401)
chr3 (287-328)||(13312016-13312057)
chr3 (292-325)||(15615137-15615170)
chr3 (290-335)||(38810898-38810943)
chr3 (82-123)||(39656453-39656494)
chr3 (287-324)||(51961031-51961068)
chr3 (292-324)||(2050115-2050147)
chr3 (292-324)||(2449152-2449184)
chr3 (292-324)||(8268650-8268682)
chr3 (292-324)||(8275750-8275782)
chr3 (82-194)||(11477220-11477332)
chr3 (292-324)||(14842487-14842519)
chr3 (292-324)||(16933869-16933901)
chr3 (292-324)||(17912398-17912430)
chr3 (292-324)||(18911300-18911332)
chr3 (292-324)||(19260749-19260781)
chr3 (81-129)||(38527841-38527889)
[»] scaffold0686 (2 HSPs)
scaffold0686 (7-345)||(5962-6300)
scaffold0686 (178-345)||(5756-5923)
[»] chr8 (42 HSPs)
chr8 (7-345)||(24716741-24717079)
chr8 (8-324)||(41506709-41507025)
chr8 (8-346)||(39115314-39115652)
chr8 (33-345)||(274507-274819)
chr8 (33-345)||(641030-641342)
chr8 (33-345)||(826836-827148)
chr8 (64-324)||(24385652-24385912)
chr8 (83-233)||(22321437-22321587)
chr8 (85-324)||(21259391-21259630)
chr8 (27-189)||(16038916-16039078)
chr8 (82-328)||(17502274-17502521)
chr8 (82-300)||(23217990-23218208)
chr8 (82-276)||(4233968-4234162)
chr8 (8-129)||(22234890-22235011)
chr8 (8-129)||(19993141-19993262)
chr8 (8-103)||(41246697-41246792)
chr8 (20-129)||(37611719-37611829)
chr8 (129-246)||(18118259-18118376)
chr8 (92-232)||(21494452-21494592)
chr8 (82-232)||(22886440-22886590)
chr8 (85-194)||(22147555-22147664)
chr8 (83-189)||(2545061-2545167)
chr8 (292-345)||(16404879-16404932)
chr8 (85-194)||(18612523-18612632)
chr8 (85-194)||(18619428-18619537)
chr8 (10-103)||(20481646-20481739)
chr8 (85-194)||(16002113-16002223)
chr8 (82-187)||(3431317-3431422)
chr8 (32-103)||(20573305-20573376)
chr8 (43-107)||(20561740-20561804)
chr8 (43-107)||(20647938-20648002)
chr8 (43-103)||(20654018-20654078)
chr8 (59-136)||(22981281-22981358)
chr8 (290-324)||(31194217-31194251)
chr8 (292-324)||(5238404-5238436)
chr8 (292-324)||(13662182-13662214)
chr8 (292-324)||(13720845-13720877)
chr8 (292-324)||(16872968-16873000)
chr8 (292-324)||(22907128-22907160)
chr8 (292-324)||(24661162-24661194)
chr8 (292-324)||(43373392-43373424)
chr8 (292-324)||(43685863-43685895)
[»] chr1 (21 HSPs)
chr1 (7-345)||(21860049-21860387)
chr1 (7-345)||(44034850-44035188)
chr1 (7-323)||(15861327-15861641)
chr1 (7-247)||(22367057-22367296)
chr1 (231-346)||(41218667-41218782)
chr1 (8-129)||(22403196-22403318)
chr1 (8-103)||(49967689-49967784)
chr1 (27-103)||(41212130-41212206)
chr1 (292-345)||(41394527-41394580)
chr1 (85-194)||(20254430-20254539)
chr1 (82-187)||(21650076-21650181)
chr1 (32-103)||(35522432-35522503)
chr1 (27-103)||(27329868-27329944)
chr1 (27-103)||(35054814-35054890)
chr1 (32-103)||(21718291-21718362)
chr1 (118-194)||(40436291-40436367)
chr1 (294-335)||(27675120-27675161)
chr1 (292-325)||(45051726-45051759)
chr1 (85-176)||(20194140-20194232)
chr1 (292-324)||(37844374-37844406)
chr1 (292-324)||(46523695-46523727)
[»] chr5 (30 HSPs)
chr5 (7-323)||(11342722-11343039)
chr5 (8-324)||(2031849-2032165)
chr5 (27-311)||(21204984-21205268)
chr5 (27-324)||(21650753-21651050)
chr5 (82-324)||(16105757-16105999)
chr5 (94-246)||(22662653-22662805)
chr5 (82-320)||(25004929-25005165)
chr5 (20-103)||(28261572-28261655)
chr5 (20-129)||(21646826-21646935)
chr5 (33-129)||(21397156-21397253)
chr5 (8-103)||(11584090-11584188)
chr5 (8-103)||(4865302-4865397)
chr5 (82-232)||(7529014-7529164)
chr5 (8-129)||(24475622-24475738)
chr5 (8-103)||(1168317-1168412)
chr5 (85-194)||(17909622-17909731)
chr5 (10-103)||(20712117-20712210)
chr5 (82-187)||(9730419-9730524)
chr5 (293-346)||(11584374-11584427)
chr5 (82-194)||(108862-108974)
chr5 (43-103)||(24183245-24183305)
chr5 (32-103)||(11337299-11337370)
chr5 (32-103)||(21906780-21906851)
chr5 (292-324)||(7425631-7425663)
chr5 (292-324)||(20623286-20623318)
chr5 (292-324)||(21233442-21233474)
chr5 (292-324)||(23507270-23507302)
chr5 (292-324)||(25900320-25900352)
chr5 (292-324)||(35791015-35791047)
chr5 (292-324)||(37053061-37053093)
[»] chr4 (46 HSPs)
chr4 (7-324)||(14951800-14952117)
chr4 (7-346)||(5682406-5682744)
chr4 (11-345)||(25119086-25119420)
chr4 (27-324)||(15272211-15272509)
chr4 (93-328)||(19559483-19559719)
chr4 (222-324)||(15135907-15136010)
chr4 (82-276)||(49071800-49071994)
chr4 (82-247)||(34177617-34177781)
chr4 (8-103)||(53704846-53704941)
chr4 (82-232)||(14500208-14500358)
chr4 (8-103)||(8872584-8872682)
chr4 (32-103)||(820029-820100)
chr4 (8-103)||(21959576-21959671)
chr4 (20-103)||(30457954-30458037)
chr4 (32-129)||(34395320-34395418)
chr4 (30-103)||(53907812-53907885)
chr4 (23-103)||(44346881-44346961)
chr4 (8-103)||(44055954-44056049)
chr4 (8-129)||(23270020-23270142)
chr4 (82-194)||(14996241-14996353)
chr4 (82-194)||(16522932-16523044)
chr4 (27-99)||(55376714-55376786)
chr4 (133-198)||(21417471-21417536)
chr4 (111-232)||(32460699-32460820)
chr4 (292-345)||(54118147-54118200)
chr4 (82-194)||(8045058-8045170)
chr4 (82-194)||(9295808-9295920)
chr4 (8-103)||(16732208-16732303)
chr4 (82-194)||(9795330-9795442)
chr4 (139-199)||(12133626-12133686)
chr4 (27-103)||(30232609-30232685)
chr4 (27-103)||(12837313-12837389)
chr4 (85-176)||(16225211-16225301)
chr4 (82-188)||(19697408-19697514)
chr4 (82-188)||(19707993-19708099)
chr4 (292-325)||(14996445-14996478)
chr4 (290-335)||(41165838-41165883)
chr4 (292-324)||(7131982-7132014)
chr4 (292-324)||(13246737-13246769)
chr4 (292-324)||(15287162-15287194)
chr4 (292-324)||(15294271-15294303)
chr4 (292-324)||(16327840-16327872)
chr4 (292-324)||(16609013-16609045)
chr4 (292-324)||(17145574-17145606)
chr4 (292-324)||(20001030-20001062)
chr4 (292-324)||(26680517-26680549)
[»] scaffold0016 (4 HSPs)
scaffold0016 (7-345)||(162057-162396)
scaffold0016 (32-345)||(166143-166456)
scaffold0016 (10-103)||(164256-164349)
scaffold0016 (290-335)||(116440-116485)
[»] scaffold0342 (1 HSPs)
scaffold0342 (7-346)||(330-668)
[»] scaffold0032 (2 HSPs)
scaffold0032 (27-324)||(55639-55936)
scaffold0032 (221-324)||(108075-108179)
[»] scaffold0116 (1 HSPs)
scaffold0116 (8-346)||(30130-30471)
[»] scaffold0597 (1 HSPs)
scaffold0597 (27-324)||(878-1175)
[»] scaffold0039 (2 HSPs)
scaffold0039 (8-324)||(12418-12736)
scaffold0039 (8-76)||(19049-19117)
[»] scaffold0251 (2 HSPs)
scaffold0251 (27-324)||(13285-13583)
scaffold0251 (27-152)||(21432-21557)
[»] scaffold0234 (1 HSPs)
scaffold0234 (27-324)||(17304-17601)
[»] scaffold0706 (1 HSPs)
scaffold0706 (43-324)||(6443-6724)
[»] scaffold0004 (2 HSPs)
scaffold0004 (27-325)||(193396-193684)
scaffold0004 (27-190)||(186560-186722)
[»] scaffold0303 (2 HSPs)
scaffold0303 (78-324)||(4346-4593)
scaffold0303 (43-247)||(5-209)
[»] scaffold0465 (1 HSPs)
scaffold0465 (27-324)||(9882-10163)
[»] scaffold0175 (2 HSPs)
scaffold0175 (27-256)||(15007-15236)
scaffold0175 (292-324)||(882-914)
[»] scaffold0028 (2 HSPs)
scaffold0028 (82-323)||(130670-130911)
scaffold0028 (32-107)||(89578-89653)
[»] scaffold0132 (1 HSPs)
scaffold0132 (183-345)||(42568-42727)
[»] scaffold0063 (1 HSPs)
scaffold0063 (82-328)||(44009-44256)
[»] scaffold0507 (1 HSPs)
scaffold0507 (82-335)||(1393-1643)
[»] scaffold0574 (1 HSPs)
scaffold0574 (27-194)||(9537-9704)
[»] scaffold1295 (1 HSPs)
scaffold1295 (82-247)||(219-384)
[»] scaffold0037 (2 HSPs)
scaffold0037 (32-194)||(95038-95204)
scaffold0037 (27-103)||(24841-24917)
[»] scaffold0079 (1 HSPs)
scaffold0079 (84-328)||(3732-3981)
[»] scaffold0057 (1 HSPs)
scaffold0057 (82-219)||(5996-6133)
[»] scaffold0091 (2 HSPs)
scaffold0091 (8-129)||(32242-32363)
scaffold0091 (8-129)||(41940-42061)
[»] scaffold0207 (1 HSPs)
scaffold0207 (82-232)||(17812-17962)
[»] scaffold0083 (1 HSPs)
scaffold0083 (8-129)||(14916-15034)
[»] scaffold0077 (3 HSPs)
scaffold0077 (27-103)||(15584-15660)
scaffold0077 (293-343)||(15348-15398)
scaffold0077 (292-325)||(36836-36869)
[»] scaffold0673 (2 HSPs)
scaffold0673 (8-129)||(6932-7056)
scaffold0673 (32-103)||(935-1006)
[»] scaffold0396 (1 HSPs)
scaffold0396 (8-103)||(11821-11916)
[»] scaffold0021 (2 HSPs)
scaffold0021 (8-103)||(132363-132458)
scaffold0021 (43-103)||(88349-88409)
[»] scaffold0001 (5 HSPs)
scaffold0001 (8-103)||(70735-70830)
scaffold0001 (82-194)||(164995-165107)
scaffold0001 (32-96)||(60869-60933)
scaffold0001 (292-324)||(172210-172242)
scaffold0001 (292-324)||(177913-177945)
[»] scaffold0480 (1 HSPs)
scaffold0480 (8-103)||(5359-5454)
[»] scaffold0240 (1 HSPs)
scaffold0240 (8-103)||(7608-7703)
[»] scaffold0173 (1 HSPs)
scaffold0173 (85-232)||(5338-5485)
[»] scaffold0044 (1 HSPs)
scaffold0044 (8-103)||(38337-38432)
[»] scaffold0008 (2 HSPs)
scaffold0008 (8-103)||(22730-22825)
scaffold0008 (292-324)||(128095-128127)
[»] scaffold0335 (1 HSPs)
scaffold0335 (82-224)||(5580-5722)
[»] scaffold0011 (2 HSPs)
scaffold0011 (32-129)||(254900-254998)
scaffold0011 (32-129)||(261506-261604)
[»] scaffold0118 (1 HSPs)
scaffold0118 (82-194)||(34442-34554)
[»] scaffold0359 (2 HSPs)
scaffold0359 (32-129)||(11740-11838)
scaffold0359 (32-103)||(1380-1451)
[»] scaffold0023 (3 HSPs)
scaffold0023 (82-232)||(61218-61368)
scaffold0023 (292-324)||(48903-48935)
scaffold0023 (292-324)||(153924-153956)
[»] scaffold0740 (1 HSPs)
scaffold0740 (30-129)||(4346-4445)
[»] scaffold0162 (2 HSPs)
scaffold0162 (86-194)||(11862-11970)
scaffold0162 (292-324)||(26340-26372)
[»] scaffold0029 (1 HSPs)
scaffold0029 (82-194)||(49877-49989)
[»] scaffold0025 (2 HSPs)
scaffold0025 (27-103)||(146659-146735)
scaffold0025 (292-324)||(146906-146938)
[»] scaffold0014 (2 HSPs)
scaffold0014 (8-103)||(85371-85466)
scaffold0014 (32-107)||(159362-159438)
[»] scaffold0012 (2 HSPs)
scaffold0012 (8-103)||(253102-253197)
scaffold0012 (292-324)||(247366-247398)
[»] scaffold1164 (1 HSPs)
scaffold1164 (293-346)||(1701-1754)
[»] scaffold0876 (1 HSPs)
scaffold0876 (293-346)||(94-147)
[»] scaffold0122 (2 HSPs)
scaffold0122 (293-346)||(19828-19881)
scaffold0122 (293-346)||(24132-24185)
[»] scaffold0049 (1 HSPs)
scaffold0049 (293-346)||(20493-20546)
[»] scaffold0103 (1 HSPs)
scaffold0103 (7-107)||(33700-33800)
[»] scaffold1867 (1 HSPs)
scaffold1867 (32-103)||(207-278)
[»] scaffold0610 (1 HSPs)
scaffold0610 (8-103)||(689-784)
[»] scaffold0190 (1 HSPs)
scaffold0190 (32-103)||(10000-10071)
[»] scaffold0615 (1 HSPs)
scaffold0615 (82-187)||(6252-6357)
[»] scaffold0310 (2 HSPs)
scaffold0310 (293-346)||(6282-6335)
scaffold0310 (293-333)||(1-41)
[»] scaffold0367 (1 HSPs)
scaffold0367 (82-182)||(17355-17455)
[»] scaffold0068 (2 HSPs)
scaffold0068 (8-108)||(48186-48286)
scaffold0068 (8-108)||(61634-61734)
[»] scaffold0035 (2 HSPs)
scaffold0035 (8-96)||(109582-109670)
scaffold0035 (8-103)||(118076-118171)
[»] scaffold0195 (1 HSPs)
scaffold0195 (32-103)||(631-702)
[»] scaffold0158 (2 HSPs)
scaffold0158 (32-103)||(25021-25092)
scaffold0158 (32-103)||(25274-25345)
[»] scaffold0120 (2 HSPs)
scaffold0120 (8-103)||(21551-21646)
scaffold0120 (8-103)||(31250-31345)
[»] scaffold0075 (1 HSPs)
scaffold0075 (8-103)||(4980-5075)
[»] scaffold0317 (1 HSPs)
scaffold0317 (85-182)||(12637-12734)
[»] scaffold0022 (2 HSPs)
scaffold0022 (11-103)||(112658-112750)
scaffold0022 (85-176)||(67997-68089)
[»] scaffold0601 (1 HSPs)
scaffold0601 (115-194)||(902-981)
[»] scaffold0338 (1 HSPs)
scaffold0338 (8-103)||(9026-9121)
[»] scaffold0160 (1 HSPs)
scaffold0160 (32-103)||(84-155)
[»] scaffold0090 (1 HSPs)
scaffold0090 (139-269)||(34404-34535)
[»] scaffold0047 (1 HSPs)
scaffold0047 (139-269)||(19881-20012)
[»] scaffold0413 (1 HSPs)
scaffold0413 (290-324)||(5990-6024)
[»] scaffold0058 (1 HSPs)
scaffold0058 (290-324)||(57392-57426)
[»] scaffold0468 (1 HSPs)
scaffold0468 (142-191)||(10992-11041)
[»] scaffold0013 (1 HSPs)
scaffold0013 (129-182)||(7112-7165)
[»] scaffold0009 (2 HSPs)
scaffold0009 (130-195)||(244855-244920)
scaffold0009 (292-324)||(272330-272362)
[»] scaffold1500 (1 HSPs)
scaffold1500 (292-324)||(1431-1463)
[»] scaffold0761 (1 HSPs)
scaffold0761 (292-324)||(1492-1524)
[»] scaffold0498 (1 HSPs)
scaffold0498 (292-324)||(9183-9215)
[»] scaffold0383 (1 HSPs)
scaffold0383 (292-324)||(2700-2732)
[»] scaffold0302 (1 HSPs)
scaffold0302 (292-324)||(12418-12450)
[»] scaffold0266 (1 HSPs)
scaffold0266 (292-324)||(1430-1462)
[»] scaffold0141 (2 HSPs)
scaffold0141 (292-324)||(22857-22889)
scaffold0141 (292-324)||(27112-27144)
[»] scaffold0124 (1 HSPs)
scaffold0124 (292-324)||(1496-1528)
[»] scaffold0117 (1 HSPs)
scaffold0117 (43-103)||(11681-11741)


Alignment Details
Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 35015374 - 35015036
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35015374 catcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 35015275  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35015274 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataa 35015175  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015174 gcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 35015075  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35015074 actaacccccttaccttaattatctccaactattagctc 35015036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 19983508 - 19983171
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| |||||||||||| | |  ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||    
T  19983508 catcatcaacaatatgactaaacaacaacaacaaccactaaccatgaaacatatcacaattcatcaacaatcatgcataattcactaattgagcatagtt 19983409  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19983408 tt-aaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataa 19983310  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983309 gcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 19983210  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19983209 actaacccccttaccttaattatctccaactattagctc 19983171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 32 - 346
Target Start/End: Original strand, 18583380 - 18583694
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatc 131  Q
    |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18583380 caacaacatcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatc 18583479  T
Q  132 atgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttca 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  18583480 atgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttca 18583579  T
Q  232 tgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatca 331  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18583580 tgataatcacttattcccataatcaatgatgcatagaacaggagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatca 18583679  T
Q  332 ccaactattagctca 346  Q
    |||||||||| ||||    
T  18583680 ccaactattaactca 18583694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 26089793 - 26090091
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26089793 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 26089892  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26089893 acattatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 26089992  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  26089993 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaatcaaatgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 18002693 - 18002395
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18002693 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcataatttacaaactacccattttcat 18002594  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18002593 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 18002494  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18002493 gttcatgataatcacttatgcccataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 23994981 - 23995279
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23994981 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 23995080  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||    
T  23995081 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaattccaaatattgg 23995180  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  23995181 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 15742417 - 15742120
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  15742417 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatatacaaattacccattttcat 15742318  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaa-catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattg 225  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  15742317 acatcatgaacttgcaatttcatcatcaacaattcatttaatcatcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattg 15742218  T
Q  226 ggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  15742217 ggttcatgataatcacttattctcataatcaattatgcat-gaacaagagaaaaagaattaaccaaaggattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 82 - 323
Target Start/End: Original strand, 4991186 - 4991427
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||||| |||||    
T  4991186 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaaat-aacat 4991284  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 280  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  4991285 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataaaatcaagagaaaaa 4991384  T
Q  281 gaattaactaaatgattatgataaaaactaacccccttacctt 323  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  4991385 gaattaaacaaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 59 - 328
Target Start/End: Complemental strand, 15889871 - 15889601
Alignment:
Q  59 atcaaaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 157  Q
    |||| |||||||||||||| ||| ||||||||| || |||| ||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  15889871 atcacaattcatcaacaac-atgtcataattcatcagttgaacataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaca 15889773  T
Q  158 attcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 257  Q
    | ||| ||| ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||| |||||||||  |||||||| |||||  |||| ||     
T  15889772 aatcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacac 15889673  T
Q  258 ttatgcatagaacaagagaaaaagaattaactaaatgattatga-taaaaactaacccccttaccttaatta 328  Q
    |||||||||||| |||||| ||  |||||||||| ||||||||| | ||| ||||||||||||||| |||||    
T  15889672 ttatgcatagaaaaagagagaagaaattaactaagtgattatgattgaaatctaacccccttacctcaatta 15889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 328
Target Start/End: Complemental strand, 22585688 - 22585441
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||    
T  22585688 cataattcttcaattgagcataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaat 22585589  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  22585588 actcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagagagaaga 22585489  T
Q  282 aattaactaaatgattatg-ataaaaactaacccccttaccttaatta 328  Q
    || ||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  22585488 aactaactaagtgattatgcttgaaatctaacccccttacctcaatta 22585441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 328
Target Start/End: Complemental strand, 22590519 - 22590272
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||  ||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||    
T  22590519 cataattcttcaattgagcataattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaat 22590420  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  22590419 actcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatagaaaaagagagaaga 22590320  T
Q  282 aattaactaaatgattatg-ataaaaactaacccccttaccttaatta 328  Q
    || ||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  22590319 aactaactaagtgattatgcttgaaatctaacccccttacctcaatta 22590272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 25640720 - 25640456
Alignment:
Q  59 atcaaaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 157  Q
    ||||||||||| ||||||| ||| || |||||| |||||||||| |||| |||||||||||||||   |||||||||||| ||||||||||||||||| |    
T  25640720 atcaaaattcaacaacaac-atgtcacaattcatcaattgagcacaattcacaaactacccatttatctacatcatgaacatgcaatttcatcatcaaaa 25640622  T
Q  158 attcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 257  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  |||||||||  ||||||||||||||  |||| ||     
T  25640621 attcaattatcatcaaattaacatactcaaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcac 25640523  T
Q  258 ttatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||| ||||||  |  ||||| |||| |||||||||| ||  |||||||||||||||||    
T  25640522 ttatgcatagaaaaagagagtagaaattacctaagtgattatgatgaattctaacccccttacctta 25640456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 58 - 300
Target Start/End: Complemental strand, 15005072 - 15004831
Alignment:
Q  58 tatcaaaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaac 156  Q
    ||||| |||||| ||||||| ||| ||||||||| ||||||| ||||||| |||||||||||||||  ||||||||| ||| ||||||||| ||||||||    
T  15005072 tatcacaattcaacaacaac-atgtcataattcatcaattgaacataattcacaaactacccatttatatacatcataaacatgcaatttcctcatcaac 15004974  T
Q  157 aattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatca 256  Q
    |||||| | ||||||||||| ||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||  |||||| |||||||  |||| ||    
T  15004973 aattcaatcaacatcaaatt-acatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagca 15004875  T
Q  257 attatgcatagaacaagagaaaaagaattaactaaatgattatg 300  Q
     |||||||||||| |||||| ||  || ||||||| ||||||||    
T  15004874 cttatgcatagaaaaagagagaagaaactaactaagtgattatg 15004831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 32276902 - 32276756
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  32276902 aattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 32276803  T
Q  185 caaacatatctctaccacataagcacgaatttcaaagattgggttca 231  Q
    ||||| |||| | |  |||  |||||||| |||||||||||||||||    
T  32276802 caaacttatcaccaaaacaagagcacgaaattcaaagattgggttca 32276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 13014917 - 13014822
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| ||||||| ||||||| ||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  13014917 atcatcaacaacatgacttaacatcagcaacaacaattgatcttgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 13014822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 25744421 - 25744331
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 98  Q
    |||||||| || ||||||||||| ||||||||||  ||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  25744421 atcatcaacaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 22440973 - 22441068
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| |||| |||||||||| |||||| ||||||| ||||| || |||| |||||| |||||||||||||||||||||||||    
T  22440973 atcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaaatcatgaacaacaatgcataattcaccaattgagcata 22441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 32898829 - 32898924
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||  | |||||| ||||||| ||||| |||||||||||||  |||||||||||||||||||||||||    
T  32898829 atcatcaacaacatgactaaacaacaacaacttcaattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 32898924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 19629447 - 19629578
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  19629447 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 19629546  T
Q  185 caaacatatctctaccacataagcacgaattt 216  Q
    ||||| |||| | || |||  |||||||||||    
T  19629547 caaacttatcaccacaacaagagcacgaattt 19629578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 26512260 - 26512385
Alignment:
Q  87 ttcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattca 186  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||| ||| || ||||||| || ||||||||||  || |||||||||    ||  ||    
T  26512260 ttcatcaattgagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaattcttgtaccca 26512359  T
Q  187 aacatatctctaccacataagcacga 212  Q
    ||||||||||||| | ||||||||||    
T  26512360 aacatatctctacaagataagcacga 26512385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 26517376 - 26517501
Alignment:
Q  87 ttcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattca 186  Q
    |||| ||||||||||||||| |||||||||||||||  ||| ||||| ||| || ||||||| || ||||||||||  || |||||||||    ||  ||    
T  26517376 ttcatcaattgagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaattcttgtaccca 26517475  T
Q  187 aacatatctctaccacataagcacga 212  Q
    ||||||||||||| | ||||||||||    
T  26517476 aacatatctctacaagataagcacga 26517501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 16300122 - 16300010
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||| | |||||  |||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  16300122 cataatttatcaattaggcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16300023  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  16300022 actcaaacttatc 16300010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 18823529 - 18823417
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||| ||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  18823529 cataagtcatcaattaagcataacttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 18823430  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  18823429 actcaaacttatc 18823417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 18839384 - 18839272
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  | |||||||    
T  18839384 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcagttaacat 18839285  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  18839284 actcaaacttatc 18839272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 194
Target Start/End: Original strand, 21931333 - 21931429
Alignment:
Q  98 agcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    ||||||||| ||||  |||||||||  | | ||||||||| ||||||||||||| |||||||||| ||| |||||| || | |||||||||||||||    
T  21931333 agcataattcacaatatacccatttatacatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaatttcatatattcaaacatatc 21931429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 17375018 - 17374924
Alignment:
Q  125 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaa 219  Q
    ||||| ||||||| || |||||||||||||| |||||| ||| || ||||||| |||| ||||||||||| |||| ||   ||||||||||||||    
T  17375018 atacaccatgaacatgtaatttcatcatcaataattcaattatcaacaaattagcatactcaaacatatcactacaactagagcacgaatttcaa 17374924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 18570353 - 18570413
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  18570353 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 18570413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 18777204 - 18777280
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| ||||||||  ||||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||| ||||    
T  18777204 aacaacaacaacattcattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacata 18777280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 31628331 - 31628402
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||| ||||||    
T  31628331 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 31628402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 18432717 - 18432777
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||| ||||||    
T  18432717 attgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 18432777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaa 325  Q
    |||||||||||||| |||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19175311 - 19175376
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    ||||||||| |||||||| |||| |||||||||| ||| |||||| || | ||| |||||||||||    
T  19175311 atcatgaacatgcaattttatcaacaacaattcaattatcatcaattttatatactcaaacatatc 19175376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 16136423 - 16136487
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatat 193  Q
    ||||||||| |||||||||||||  ||| ||||| ||| |||||| || | ||||||||||||||    
T  16136423 atcatgaacatgcaatttcatcaaaaactattcaattatcatcaatttcatatattcaaacatat 16136487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16232199 - 16232231
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  16232199 atgattatgataataactaacccccttacctta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 19610325 - 19610357
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  19610325 atgattatgataataactaacccccttacctta 19610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 7 - 345
Target Start/End: Original strand, 22274760 - 22275098
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  22274760 catcatcaacaatatgactaaacatcaacaacaaccattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 22274859  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22274860 tacaaacaacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 22274959  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22274960 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaag 22275059  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
     ||||||||||||||||||||||| ||||||||||||||    
T  22275060 gctaacccccttaccttaattatctccaactattagctc 22275098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 7 - 345
Target Start/End: Original strand, 22283993 - 22284331
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||| ||||||||||||| |||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  22283993 catcatcaacaataagactaaacatcaaaaacaacgattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 22284092  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22284093 tactaactattcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacattaaattaacatattcaaacatatctctaccacataa 22284192  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  22284193 gcacgaatttcaaagattgagttcatgataatcacttattctcataatcaaatatgcatagaacaagagaaaaagaattaactaaatgattatgataaag 22284292  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22284293 actaacccccttaccttaattatctccaactattagctc 22284331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 43 - 324
Target Start/End: Complemental strand, 9653077 - 9652796
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgca 142  Q
    |||||| |||||| |||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9653077 attgatcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgagtataatttacaaactacccattttcatacatcatgaacttgca 9652978  T
Q  143 atttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcact 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  9652977 atttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgggttcatgataatcact 9652878  T
Q  243 tattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9652877 tattcccataatcaattatgcatagaacaagaaaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 21274246 - 21273949
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21274246 aacaacaacaacatctattgatcatgaaacatattacaattcatcaacaaccatgcataattcaccaattgagtataatttacaaactacccattttcat 21274147  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  21274146 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 21274047  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||    
T  21274046 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaatcaaatgattatgataaagactaa-ccccttacctta 21273949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 82 - 323
Target Start/End: Original strand, 25213162 - 25213403
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| |||||||    
T  25213162 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacat 25213260  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 280  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25213261 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 25213360  T
Q  281 gaattaactaaatgattatgataaaaactaacccccttacctt 323  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  25213361 gaattaatcaaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 82 - 341
Target Start/End: Original strand, 15633327 - 15633586
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  15633327 cataattcatcaattaagcataatttcacaactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 15633426  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | |||||| |||| | |  |||  |||||||| |||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15633427 actcaaacttatcaccaaaacaagagcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaagagaaaaag 15633526  T
Q  282 aattaactaaatgattatgataaaaactaacccccttaccttaattatcaccaactatta 341  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  15633527 aattaactaagtgattatgataaagactaacctccttaccttaattatctccaactatta 15633586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 59 - 324
Target Start/End: Original strand, 7321607 - 7321872
Alignment:
Q  59 atcaaaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaaca 157  Q
    ||||||||||| ||||||| ||| || |||||| |||||||||| |||| |||||||||||||||  ||||||||| ||| || ||||||||||| || |    
T  7321607 atcaaaattcaacaacaac-atgtcacaattcatcaattgagcacaattcacaaactacccatttatatacatcataaacatgaaatttcatcataaaaa 7321705  T
Q  158 attcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaa 257  Q
    ||||| ||| ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  |||||||||  ||| ||||||||||  |||| ||     
T  7321706 attcaattatcatcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcac 7321805  T
Q  258 ttatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
     ||||||||| | ||||||  |  |||||||||| ||||||| || ||  |||||||||||||||||    
T  7321806 gtatgcataggaaaagagagtagaaattaactaagtgattataatgaattctaacccccttacctta 7321872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 23836913 - 23836791
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  23836913 atcatcaacaaaatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 23836814  T
Q  108 acaaac-tacccattttcataca 129  Q
     || || ||||||||||||||||    
T  23836813 tcacacatacccattttcataca 23836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 25876127 - 25876006
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || |||||||||||  |||||||||  ||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  25876127 atcatcaacaacatgactaaacaataacaacaacatttgatcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 25876028  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  25876027 cacaca-tacccattttcataca 25876006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 32465897 - 32465992
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||| | |||||| ||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||    
T  32465897 atcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaagaacaatgcataattcaccaattgagcata 32465992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 6879476 - 6879597
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||| | |||||||||| |||||| || |||||||||| |||||||||| ||| ||||||||||||||||||||| ||| |||    
T  6879476 atcatcaacaacatgactaaataacaacaacaacaattgatcattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtatatttt 6879575  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  6879576 cacaca-tacccattttcataca 6879597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 20279571 - 20279688
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggt 228  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||  ||||||||||||||  |||| |||||||||||||| ||||  ||    
T  20279571 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatacccaaacatatctctataacatgagcacgaatttcaacgattaagt 20279670  T
Q  229 tcatgataatcacttatt 246  Q
    |||  |||||||||||||    
T  20279671 tcaccataatcacttatt 20279688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 28031380 - 28031230
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||    
T  28031380 cataattcatcaattaagcataatttcacaactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacat 28031281  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | | |||| |||| | |  |||  |||||||| ||||||||||||||||||    
T  28031280 actaaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 28031230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 33128158 - 33128308
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  33128158 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 33128257  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||| | |  |||  ||||||||  | |||||||||||||||    
T  33128258 actcaaacttatcaccaaaacaagagcacgaaaattaaagattgggttcat 33128308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 24826860 - 24826748
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  24826860 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 24826761  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  24826760 actcaaacttatc 24826748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 19794661 - 19794608
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  19794661 atgattatgatgaagactaacccccttaccttaattatctccaactattagctc 19794608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 20627270 - 20627217
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  20627270 atgattatgataaagactaaccccgttaccttaattatctccaactattagctc 20627217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 17204445 - 17204550
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| ||||||||||||||  ||  |||||||||    
T  17204445 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatgatgcaattaacat 17204544  T
Q  182 attcaa 187  Q
    | ||||    
T  17204545 actcaa 17204550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 43642913 - 43642860
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||    
T  43642913 atgattatgataaagactaacctccttcccttaattatctccaactattagctc 43642860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 271233 - 271304
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| |  ||||||||||||||||||||||    
T  271233 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 36890869 - 36890798
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||||| |||||| ||||||| ||||| |||| |||||||||   |||||||||||||||| ||||||    
T  36890869 caacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaattaagcata 36890798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 4448317 - 4448246
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||| ||||||||||||| ||||    
T  4448317 caacaacatcaattgatcatgaaacttatcataattcaacaacaacaaagcatcattcaccaattgaacata 4448246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 25602087 - 25602158
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||| ||   |||||| ||||||||||||||||    
T  25602087 caacaacatcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgagcata 25602158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 28974088 - 28974183
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| || || ||||||||||||||   ||||||||| |||| ||||||||    
T  28974088 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttaccacaattcatcaacaacatagcataattcgccaaatgagcata 28974183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 19666843 - 19666884
Alignment:
Q  287 actaaatgattatgataaaaactaacccccttaccttaatta 328  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  19666843 actaaatgattatgatgaattctaacccccttaccttaatta 19666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaa 325  Q
    |||||||||||||| |||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 25595168 - 25595245
Alignment:
Q  117 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    ||||||||| | || ||| || ||||||||||||| |||||||||||||| || |||||| |  || |||||||||||    
T  25595168 ccattttcacatattatggacatgcaatttcatcaacaacaattcatttatcaccaaattcatgtactcaaacatatc 25595245  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 463043 - 463075
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 3798552 - 3798520
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  3798552 atgattatgataataactaacccccttacctta 3798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 8944153 - 8944185
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttacctta 8944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 12635817 - 12635785
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttacctta 12635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 12641591 - 12641559
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttacctta 12641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 12728699 - 12728731
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttacctta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16935900 - 16935932
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  16935900 atgattatgataataactaacccccttacctta 16935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 17006560 - 17006592
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  17006560 atgattatgataataactaacccccttacctta 17006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 22863235 - 22863267
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  22863235 atgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 36982396 - 36982364
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  36982396 atgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 42177918 - 42177886
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  42177918 atgattatgataataactaacccccttacctta 42177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 7 - 345
Target Start/End: Original strand, 126453 - 126791
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  126453 catcatcaacagtatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 126552  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  126553 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctgcaacataa 126652  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  126653 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaatagaaaaagaattaactaaatgattatgataaaa 126752  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  126753 actaacccccttaccttaattatctccaactattagctc 126791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 8 - 346
Target Start/End: Complemental strand, 111485 - 111147
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  111485 atcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 111386  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  111385 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatattcaaacatatctctacaacataag 111286  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  111285 cacgaatttcaaatattgggttcatgataatcacttattttcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaa 111186  T
Q  308 ctaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  111185 ctaacccccttaccttaattatcaccaacttttagctca 111147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 8 - 345
Target Start/End: Complemental strand, 32494262 - 32493925
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32494262 atcatcaatcatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 32494163  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||     
T  32494162 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctacaacataaa 32494063  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494062 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 32493963  T
Q  308 ctaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32493962 ctaacccccttaccttaattatctccaactattagctc 32493925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 7 - 341
Target Start/End: Complemental strand, 1937217 - 1936900
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||            ||||||||||||||||| |||||||||||||||||||||||||    
T  1937217 catcatcaacaatatgactaaacatcaacaacaaccattgatcat------------aattcatcaacaaccatacataattcaccaattgagcataatt 1937130  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||||||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1937129 tacaaactacccatttt-----atcatgaacttgcaatttcatcatgaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 1937035  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1937034 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 1936935  T
Q  307 actaacccccttaccttaattatcaccaactatta 341  Q
    ||||||| |||||||||||||||| ||||||||||    
T  1936934 actaacctccttaccttaattatctccaactatta 1936900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 17 - 324
Target Start/End: Complemental strand, 42056496 - 42056188
Alignment:
Q  17 aatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactac 116  Q
    ||||| ||| |||| |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42056496 aatatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattcacaaactac 42056397  T
Q  117 ccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaattt 216  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  42056396 ccattttcatacatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaattt 42056297  T
Q  217 caaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  42056296 caaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccc 42056197  T
Q  316 cttacctta 324  Q
    |||||||||    
T  42056196 cttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 34 - 324
Target Start/End: Original strand, 2028986 - 2029276
Alignment:
Q  34 acaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcat 133  Q
    |||||| | |||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2028986 acaacatctattgatcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcataatttacaaactacccattttcgtacatcat 2029085  T
Q  134 gaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  2029086 gaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatg 2029185  T
Q  234 ataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2029186 ataatcacttattctcataatcaattatgcatagaacaagagaaaaaaaattaactaaatgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 43 - 324
Target Start/End: Complemental strand, 2190367 - 2190085
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgca 142  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2190367 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactatccattttcatacatcatgaacttgca 2190268  T
Q  143 atttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcact 242  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  2190267 atttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtacatgataatcact 2190168  T
Q  243 tattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  2190167 tattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaaaactaaccgccttacctta 2190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 3049641 - 3049937
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||    
T  3049641 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcataatttacaaactacccatattcat 3049740  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  3049741 acatcatgaacttgcaatttcatcatcc-caattcatttaacatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaagattgg 3049839  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3049840 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 185 - 320
Target Start/End: Complemental strand, 15516901 - 15516765
Alignment:
Q  185 caaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaa 283  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 15516802  T
Q  284 ttaactaaatgattatgataaaaactaacccccttac 320  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  15516801 ttaaccaaatgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 85 - 276
Target Start/End: Complemental strand, 39291648 - 39291457
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  39291648 aattcaccaattgagcataattcacaaactacccatttatatacatcatcaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatact 39291549  T
Q  185 caaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 276  Q
    |||||||||| |||| |||| |||||||||||||||  || ||||||  ||||||||||||||  ||||  | |||||||||||| ||||||    
T  39291548 caaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatagaaaaagaga 39291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 82 - 322
Target Start/End: Original strand, 13352065 - 13352306
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||||||||||||| | | |||||||||||  ||||||||||||| |||||||||| ||||||||| |||  || ||||||||||||||    
T  13352065 cataattcatcaattgagcataattaaaatactacccatttatatacatcatgaacatgcaatttcaccatcaacaaatcaaatatcatcaaattaacat 13352164  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | | ||||||||| |||| |||| |||||||||||||| | |||||||||  ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  13352165 actgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatagaaaaagagagaaga 13352264  T
Q  282 aattaactaaatgattatg-ataaaaactaacccccttacct 322  Q
    || ||| ||| ||||||||  | ||| |||||||||||||||    
T  13352265 aactaattaagtgattatgcttgaaatctaacccccttacct 13352306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 39046831 - 39046740
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 99  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39046831 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 39046740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 15977940 - 15977820
Alignment:
Q  125 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagatt 224  Q
    ||||| ||||||| ||||||||||||||||| |||||| ||| || |||||||||||| ||||||||||| |||| ||   |||| |||||||||| |||    
T  15977940 atacaccatgaacatgcaatttcatcatcaataattcaattatcaacaaattaacatactcaaacatatcactacaactagagcatgaatttcaaacatt 15977841  T
Q  225 gggttcatgataatcacttat 245  Q
      |||||| ||||||||||||    
T  15977840 tagttcataataatcacttat 15977820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 35094856 - 35094974
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| ||||| |||| |||||| ||||||||| | | ||||||||||||||  |||||||||||||||||||||||| |||    
T  35094856 atcatcaacaacatgactaaacaacaacagcaac-attgatcatgaaacatttaacaattcatcaacaacagtgcataattcaccaattgagcatatttt 35094954  T
Q  108 -acaaactacccattttcata 127  Q
     ||| | ||||||||||||||    
T  35094955 cacaca-tacccattttcata 35094974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 44865288 - 44865391
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttca 125  Q
    |||| |||||||||| ||| || ||||||| ||||| |||||||||||||  ||||||||||||||||||||||||| |||  | || ||||||||||||    
T  44865288 aacaacaacaacaacaattaatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcatattttcaacacatacccattttca 44865387  T
Q  126 taca 129  Q
    ||||    
T  44865388 taca 44865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 47289832 - 47289942
Alignment:
Q  20 atgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-taccc 118  Q
    |||||| |||| ||||| |||| |||||| ||||||| | ||| |||||||||||||| | ||||||||||||||||||||||| |||  | || |||||    
T  47289832 atgacttaacagcaacagcaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccc 47289931  T
Q  119 attttcataca 129  Q
    |||||||||||    
T  47289932 attttcataca 47289942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 143703 - 143800
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    ||||||||| |||||| ||||||| | ||| |||||||||||||| | ||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  143703 aacaacaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacatacccattttcataca 143800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 12759038 - 12759121
Alignment:
Q  20 atgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| |||| |||||||||| |||||| ||||||| ||||| |||||| |||||||   |||||||||||||||||||||||    
T  12759038 atgacttaacaacaacaacaacaattgatcatgaaacttatcataattcaccaacaacatagcataattcaccaattgagcata 12759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 371203 - 371308
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  371203 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 371302  T
Q  182 attcaa 187  Q
    | ||||    
T  371303 actcaa 371308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 7283987 - 7283934
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactca 7283934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 3895083 - 3895159
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  3895083 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 3895159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 18151399 - 18151259
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggt 228  Q
    ||||||||| | ||| ||| |||||||||||||| ||| || ||||||||||||   || |||||| |||| |||| |||||||||||||| | ||  ||    
T  18151399 atcatgaacatacaaattcgtcatcaacaattcaattatcaacaaattaacatacctaatcatatcactacaacatgagcacgaatttcaacggttaagt 18151300  T
Q  229 tcatgataatcacttattctcataatcaattatgcatagaa 269  Q
    |||  ||||||||||||||  ||||  | ||||||||||||    
T  18151299 tcacaataatcacttattcaaataagaatttatgcatagaa 18151259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 8563468 - 8563369
Alignment:
Q  95 ttgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    |||||||||| | ||||  ||| |||||  ||| ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | ||| |||||||||||    
T  8563468 ttgagcataactcacaatatactcatttatatatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatc 8563369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 11287456 - 11287551
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | | |||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  11287456 atcatcaacaacatgacttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 11287551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 3060271 - 3060324
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||    
T  3060271 atgattatgataaagacttacccccttaccttcattatctccaactattagctc 3060324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 15822615 - 15822544
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | ||||||||||||| |||||||||    
T  15822615 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccatttgagcata 15822544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 17984827 - 17984753
Alignment:
Q  145 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaa 219  Q
    |||||||||||||||||| ||| || ||||||||||||  |||||||||| |||  |||  ||||||||||||||    
T  17984827 ttcatcatcaacaattcaattatcaacaaattaacatacccaaacatatcactaaaacaagagcacgaatttcaa 17984753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 13377849 - 13377894
Alignment:
Q  290 aaatgattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  13377849 aaatgattatgatgaattctaacccccttaccttaattatcaccaa 13377894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 7284244 - 7284173
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | | |||||||||||||| ||||||    
T  7284244 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattaagcata 7284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 12370024 - 12369953
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | ||| || ||||||  ||||| |||||| ||||||| | |||||||||||||||||||||||    
T  12370024 caacaacatcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgagcata 12369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 26070448 - 26070377
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||||||    ||||||||||||||| ||||||    
T  26070448 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcata 26070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 26094235 - 26094164
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||||||    ||||||||||||||| ||||||    
T  26094235 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaattaagcata 26094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 15575920 - 15575874
Alignment:
Q  145 ttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 191  Q
    |||||||||||||| | | |||||||||||||||||||| |||||||    
T  15575920 ttcatcatcaacaacttaattaacatcaaattaacatatccaaacat 15575874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 25124445 - 25124482
Alignment:
Q  287 actaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25124445 actaaatgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 13758677 - 13758709
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttacctta 13758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 15862226 - 15862258
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  15862226 atgattatgataataactaacccccttacctta 15862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 15927875 - 15927907
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  15927875 atgattatgataataactaacccccttacctta 15927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16212071 - 16212103
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  16212071 atgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 18979970 - 18979938
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  18979970 atgattatgataataactaacccccttacctta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 36052971 - 36053003
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  36052971 atgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 31497 - 31159
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31497 catcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 31398  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  31397 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataa 31298  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  31297 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaa 31198  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31197 actaacccccttaccttaattatctccaactattagctc 31159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 299; Significance: 1e-168; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 7 - 345
Target Start/End: Original strand, 41347 - 41685
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41347 catcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 41446  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  41447 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacacatgtctacaacataa 41546  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41547 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaatgaattaactaaatgattgtgataaaa 41646  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41647 actaacccccttaccttaattatctccaactattagctc 41685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 295; Significance: 1e-166; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 8 - 346
Target Start/End: Original strand, 79903 - 80241
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  79903 atcatcaaccatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataattt 80002  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  80003 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttaacatcaaattaacatattcaaacatatctctaccacataag 80102  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  80103 cacaaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaga 80202  T
Q  308 ctaacccccttaccttaattatcaccaactattagctca 346  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  80203 ctaacccccttaccttaattatctccaactattagctca 80241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 46228 - 46299
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| |||||||| ||||||| ||||| |||| | |||||||   |||||||||||||||||||||||    
T  46228 caacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 46299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 40696 - 40792
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    ||||| ||| ||||| ||| | || |||||||| |||||||| ||||||| ||||| |||  | ||||||    |||||||||||||||||||||||    
T  40696 catcaacaacaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaacaatatagcataattcaccaattgagcata 40792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 17956201 - 17955863
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  17956201 catcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgagtataatt 17956102  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17956101 tacaaactactcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcagacatatctctaccacataa 17956002  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  17956001 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcgattatgcatagaacaagagaaaaagaattaactaaatgattatgataaag 17955902  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17955901 actaacccccttaccttaattatctccaactattagctc 17955863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 7 - 324
Target Start/End: Original strand, 30152980 - 30153297
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30152980 catcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 30153079  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30153080 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataa 30153179  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30153180 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaattaaatgattatgataaaa 30153279  T
Q  307 actaacccccttacctta 324  Q
    ||||||||||||||||||    
T  30153280 actaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 8 - 346
Target Start/End: Original strand, 7854021 - 7854359
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  7854021 atcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaacataattt 7854120  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7854121 accaattatccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataag 7854220  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7854221 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaa 7854320  T
Q  308 ctaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7854321 ctaacccccttaccttaattatcaccaactattagctca 7854359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 8 - 345
Target Start/End: Original strand, 45581670 - 45582008
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  45581670 atcatcaaccatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataattt 45581769  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  45581770 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcattaatcatcaaattaacatattcaaacatatctctacaacataag 45581869  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45581870 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 45581969  T
Q  308 ctaa-cccccttaccttaattatcaccaactattagctc 345  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  45581970 ctaaccccccttaccttaattatctccaactattagctc 45582008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 346
Target Start/End: Complemental strand, 54038340 - 54038002
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| |||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  54038340 atcatcaactatatgactaaacaacaacaacaaccattaatcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcataattt 54038241  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||    
T  54038240 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaatataag 54038141  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    ||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54038140 cacgaatgtcaaacattgagttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 54038041  T
Q  308 ctaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54038040 ctaacccccttaccttaattatcaccaactattagctca 54038002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 323
Target Start/End: Complemental strand, 54685517 - 54685202
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54685517 atcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 54685418  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54685417 accaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataag 54685318  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |    
T  54685317 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatcataaaga 54685218  T
Q  308 ctaacccccttacctt 323  Q
    ||||||| ||||||||    
T  54685217 ctaacccacttacctt 54685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 8 - 324
Target Start/End: Original strand, 33341920 - 33342236
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33341920 atcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgagcataattt 33342019  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  33342020 accaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatctctaccacattag 33342119  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  33342120 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaga 33342219  T
Q  308 ctaacccccttacctta 324  Q
    ||||||| |||||||||    
T  33342220 ctaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 27 - 345
Target Start/End: Original strand, 3992608 - 3992926
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3992608 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcct 3992707  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||     
T  3992708 acatcatgaacctgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaaggttga 3992807  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 326  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992808 gttcatgataattacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 3992907  T
Q  327 tatcaccaactattagctc 345  Q
    |||| ||||||||||||||    
T  3992908 tatctccaactattagctc 3992926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 53771099 - 53771397
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771099 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 53771198  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  53771199 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 53771298  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  53771299 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 27 - 345
Target Start/End: Original strand, 2844249 - 2844567
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2844249 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaagaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 2844348  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||||||||||||||    
T  2844349 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgg 2844448  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaat 326  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2844449 gttcatgataatcgcttattcccataatcaattatgcatagaataagagaaaaagaatcaactaaatgattatgataaaaactaacccccttaccttaat 2844548  T
Q  327 tatcaccaactattagctc 345  Q
    |||| | ||||||||||||    
T  2844549 tatctcaaactattagctc 2844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 23492431 - 23492728
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  23492431 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcataatttacaaactacccattttcat 23492530  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  23492531 acatcatgaacttgcaatttcataatcaacaattcatttaacatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaaagattgg 23492630  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23492631 gttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 16261511 - 16261809
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16261511 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcgt 16261610  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  16261611 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 16261710  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16261711 gttcatgataatcacttattctcataatcaattacgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 38167972 - 38168269
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||| | ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  38167972 aacaacaacaacatctattgatcatgaaacttattacaattcatcaacaacatagcataattcaccaattgagcataatttacaaactacccattttcat 38168071  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  38168072 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaaagattgg 38168171  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  38168172 gttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 69 - 324
Target Start/End: Original strand, 28558271 - 28558526
Alignment:
Q  69 atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaac 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  28558271 atcaacaaccatgcataattcaccaattgagcatcatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaatttatttatc 28558370  T
Q  169 atcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 268  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  28558371 atcaaattaacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatgga 28558470  T
Q  269 acaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28558471 acaagagaaaaagaattaactaaatgattatgataaaaactaaccctcttacctta 28558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 105 - 345
Target Start/End: Original strand, 55513006 - 55513246
Alignment:
Q  105 tttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacat 204  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  55513006 tttacaaactacccattttcatacatcattaacttgcaatttcatcatcaacaattcatttaacatcgaattaacatattcaaacatatctctacaacat 55513105  T
Q  205 aagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataa 304  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55513106 aagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataa 55513205  T
Q  305 aaactaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  55513206 aaactaacccccttaccttaattatctccaactattagctc 55513246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 82 - 324
Target Start/End: Original strand, 18970034 - 18970277
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  18970034 cataattcatcaattgagcataattcacaaactacccatttacatacatcatgaacatgaaatttcatcatcaacaattcaattaacatcaaattaacat 18970133  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | | ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||||      
T  18970134 acttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcatagaaaaagagaaaaga 18970233  T
Q  282 aattaactaaatgattatga-taaaaactaacccccttacctta 324  Q
    || ||||||| || |||||| | ||| |||||||||||||||||    
T  18970234 aactaactaagtggttatgattgaaatctaacccccttacctta 18970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 85 - 335
Target Start/End: Original strand, 15550714 - 15550964
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| |    
T  15550714 aattcatcaattgagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 15550813  T
Q  185 caaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaat 284  Q
    |||||||||| |||| |||| |||||||||||||||  |||||||||  ||||||||||||||  || | || ||||||||| ||  |||||  |  |||    
T  15550814 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaattagcacttatgcataaaaagagagagtagaaat 15550913  T
Q  285 taactaaatgattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    ||||||| |||||||||| ||  |||||||||||| |||||||||||||||    
T  15550914 taactaagtgattatgatgaattctaacccccttatcttaattatcaccaa 15550964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 48421690 - 48421855
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||||||||||| |||||||  ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||    
T  48421690 cataattcaccaattgaacataattctcaaactacccatttatatacatcatgaacatgcaatttcatcaccaacaattcaattatcatcaaattaacat 48421789  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattc 247  Q
    | ||||||||||| |||| |||| |||| |||||||||||||||||||||  ||||||||||||||    
T  48421790 actcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 16996267 - 16996172
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16996267 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 16996172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 317716 - 317621
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  317716 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaatttagcata 317621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 19570896 - 19570801
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  19570896 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata 19570801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 50112259 - 50112164
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||| | |||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  50112259 atcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 50112164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 12349938 - 12349843
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| |||| |||||||||| |||||| ||||||| ||||| ||||||||||| || |||||||||||||||||||||||||    
T  12349938 atcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaactacgatgcataattcaccaattgagcata 12349843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 22144480 - 22144358
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||| || |||| |||||||||| |||||| ||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||| |||    
T  22144480 atcatcaacaacatggcttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgagcatatttt 22144381  T
Q  108 acaaac-tacccattttcataca 129  Q
      | || ||||||||||||||||    
T  22144380 caacacatacccattttcataca 22144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 6154539 - 6154419
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || |||||| ||||  ||||||||| |||||| ||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||| |||    
T  6154539 atcatcaacaacatgacttaacaataacaacaacaattgatcatgaaacttatcacaattcatcaataacaatgcataattcaccaattgagcatatttt 6154440  T
Q  108 acaaac-tacccattttcata 127  Q
      | || ||||||||||||||    
T  6154439 caacacatacccattttcata 6154419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 19946812 - 19946962
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   |||||| ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  19946812 cataaatcatcaattaagcataatttcacaactactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 19946911  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||  |||| | |  |||  |||||||| ||||||||||||||||||    
T  19946912 actcaaatttatcaccaaaacaagagcacgaaattcaaagattgggttcat 19946962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 13817554 - 13817646
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||||   ||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  13817554 atcatcaacaacatgactaaacaacaacaacaa---ttgatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgagcata 13817646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 14177105 - 14177017
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttc 217  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||| |||||| | ||||||||| |||| |||| || |||||||||    
T  14177105 atcatgaacatgcaatttcatcatcaacaattcaattatcatcaaatgaacatactgaaacatatcactacaacatgaggacgaatttc 14177017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 6146951 - 6146832
Alignment:
Q  11 atcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttaca 110  Q
    ||||| || |||||| |||| ||||| |||| |||||  ||||||| ||||| |||||||||||||| |||||| |||||||||||||||||| |||  |    
T  6146951 atcaacaacatgacttaacaacaacagcaacaattgaccatgaaacttatcacaattcatcaacaacaatgcatgattcaccaattgagcatattttcaa 6146852  T
Q  111 aac-tacccattttcataca 129  Q
     || ||||||||||||||||    
T  6146851 cacatacccattttcataca 6146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 269
Target Start/End: Original strand, 17393590 - 17393735
Alignment:
Q  125 atacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagatt 224  Q
    ||||| ||||||| |||||||||||| |||| |||||| ||| || ||||||||||||  |||||||||| |||| ||   ||||||||||||||  |||    
T  17393590 atacagcatgaacatgcaatttcatcgtcaataattcaattatcaacaaattaacatacccaaacatatcactacaactagagcacgaatttcaacaatt 17393689  T
Q  225 gggttcatgataatcacttattctca--taatcaattatgcatagaa 269  Q
      |||||| ||||||||||| |||||  ||| |||||||||||||||    
T  17393690 aagttcataataatcactta-tctcaattaagcaattatgcatagaa 17393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 11402752 - 11402898
Alignment:
Q  131 catgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttc 230  Q
    ||||||| || |||||||||| |||||||||| ||| ||||||||| | ||| ||||||||||| |||  | || ||||||||||||||  |||  ||||    
T  11402752 catgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcactataatatgagcacgaatttcaacaattaagttc 11402851  T
Q  231 atgataatcacttattctcataatcaattatgcatagaacaagagaa 277  Q
    |  ||||||||||||||  |||| || || |||||||||| ||||||    
T  11402852 acaataatcacttattcaaataagcacttgtgcatagaactagagaa 11402898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 14285075 - 14285225
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| |||||| |||   |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  14285075 cataattcatcaattaagcatattttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 14285174  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||| | |  |||  |||||||| ||||| | ||||||||||    
T  14285175 actcaaacttatcaccaaaacaagagcacgaaattcaagggttgggttcat 14285225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 16182153 - 16182032
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||| | |||||||||| |||||| || |||| ||||| ||||||||||| || ||||||||||||||||||  ||||| |||    
T  16182153 atcatcaacaacatgactaaaaaacaacaacaacaattgatcattaaacttatcacaattcatcaacgacaatgcataattcaccaatttggcatatttt 16182054  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  16182053 cacaca-tacccattttcataca 16182032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 8275986 - 8275874
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| | |  |||||||||    
T  8275986 cataattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcgttcaattaacat 8275887  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  8275886 actcaaacttatc 8275874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 9303241 - 9303129
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  9303241 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 9303142  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  9303141 actcaaacttatc 9303129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 12539156 - 12539066
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaa 219  Q
    ||||||||| |||||||||||||||||||||||| ||| || |||||| ||||| |||| |||||| |||  |||  ||||||||||||||    
T  12539156 atcatgaacatgcaatttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatcactaaaacaagagcacgaatttcaa 12539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 34439509 - 34439451
Alignment:
Q  50 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattta 108  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  34439509 atgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatatttta 34439451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 16934115 - 16934010
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  16934115 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16934016  T
Q  182 attcaa 187  Q
    | ||||    
T  16934015 actcaa 16934010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 19232089 - 19232142
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  19232089 atgattaagataaagactaacccccttaccttaattatctccaactattagctc 19232142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 8268886 - 8268774
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||| ||| |||||||||||| |||||| ||  ||||||||| |||||||||||||| | |  |||||||||    
T  8268886 cataattcatcaattaagcataatttcataacaaccaattttcatacattatgaacatgttatttcatcaccaacaattcatttatcgttcaattaacat 8268787  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  8268786 actcaaacttatc 8268774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 12349723 - 12349652
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||||||||||    
T  12349723 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 12349652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 53898628 - 53898541
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    |||||| ||||||| ||||| ||| || ||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  53898628 attgatcatgaaacttatcacaatgcaacaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 53898541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 54424076 - 54424146
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    ||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  54424076 aacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 54424146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 15857195 - 15857142
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||| || |||||||||||||||||||||||| |||| |||||||||    
T  15857195 atgattatgatgaagactaacccccttaccttaattatctccaagtattagctc 15857142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 17100727 - 17100787
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  17100727 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 17100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 17101412 - 17101472
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  17101412 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 17101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 19261028 - 19260952
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||   | |||||||||||||||||||||    
T  19261028 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacttagtataattcaccaattgagcata 19260952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 35123759 - 35123830
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||  |||||| | |||||||||||||||||||||||    
T  35123759 caacaacatcaattgatcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgagcata 35123830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 37915361 - 37915290
Alignment:
Q  148 atcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaa 219  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||||| |||| ||   ||||||||||||||    
T  37915361 atcatcaacaattcaattaacaacaaattaacatacccaaacatatcactacaactagagcacgaatttcaa 37915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 14298485 - 14298555
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    ||||||| | |||||| ||||||| ||||| |||||  ||||||| | |||||||||||||||||||||||    
T  14298485 aacaacatcaattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcata 14298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 14304112 - 14304182
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    ||||||| | |||||| ||||||| ||||| |||||  ||||||| | |||||||||||||||||||||||    
T  14304112 aacaacatcaattgatcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgagcata 14304182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 16744073 - 16744020
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||| |||| ||||||| | |||||||||||||| ||||||||||||||    
T  16744073 atgattatggtaaagactaacctcgttaccttaattatctccaactattagctc 16744020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 38375798 - 38375718
Alignment:
Q  114 tacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    |||||||||||| | || |||||| ||||||||||||  |||||||||| ||| ||||||||| |  || |||||||||||    
T  38375798 tacccattttcacaaattatgaacatgcaatttcatctacaacaattcaattatcatcaaattcatgtactcaaacatatc 38375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 17523073 - 17523002
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||| | ||||||| ||||| |||||||||| |||   |||||||||||||||||||||||    
T  17523073 caacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgagcata 17523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 10913001 - 10913111
Alignment:
Q  85 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatat 183  Q
    |||||| ||||| ||||| |||| ||||  |||||||||||| | || ||| || ||||||||||||| |||||||||| ||| || |||||| |  ||     
T  10913001 aattcaacaattagagcacaattcacaatatacccattttcacatattatggacatgcaatttcatcaacaacaattcaattatcaccaaattcatgtac 10913100  T
Q  184 tcaaacatatc 194  Q
    |||||||||||    
T  10913101 tcaaacatatc 10913111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 13301401 - 13301360
Alignment:
Q  287 actaaatgattatgataaaaactaacccccttaccttaatta 328  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  13301401 actaaatgattatgatgaattctaacccccttaccttaatta 13301360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 13312057 - 13312016
Alignment:
Q  287 actaaatgattatgataaaaactaacccccttaccttaatta 328  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  13312057 actaaatgattatgatgaattctaacccccttaccttaatta 13312016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaa 325  Q
    |||||||||||||| |||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 38810943 - 38810898
Alignment:
Q  290 aaatgattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    ||||||||||||| ||  ||||||||||||||||| ||||||||||    
T  38810943 aaatgattatgatgaattctaacccccttaccttagttatcaccaa 38810898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 39656453 - 39656494
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccatttt 123  Q
    |||||||||||||||||  |||||| ||||||||||||||||    
T  39656453 cataattcaccaattgaatataattcacaaactacccatttt 39656494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 51961068 - 51961031
Alignment:
Q  287 actaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||| || ||||||||||||||||||    
T  51961068 actaaatgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 2050115 - 2050147
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  2050115 atgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 8268682 - 8268650
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttacctta 8268650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 8275782 - 8275750
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttacctta 8275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 11477332 - 11477220
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||| ||| |||||| ||  |||| || | | |||| ||||||| |||  |||||||||    
T  11477332 cataattcatcaattaagcataatttcacaacaacccattttcatgcattatgaacatgttattttattaaccacaaatcatttatcattcaattaacat 11477233  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  11477232 actcaaacttatc 11477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 14842519 - 14842487
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  14842519 atgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 18911300 - 18911332
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  18911300 atgattatgataataactaacccccttacctta 18911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 19260781 - 19260749
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  19260781 atgattatgataaagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 38527841 - 38527889
Alignment:
Q  81 gcataattcaccaattgagcataatttacaaactacccattttcataca 129  Q
    ||||||||||||||||||||||| ||| | |  ||||||||||||||||    
T  38527841 gcataattcaccaattgagcatattttcccacatacccattttcataca 38527889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 291; Significance: 1e-163; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 6300 - 5962
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6300 catcatcaacaatattactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 6201  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  6200 tacaaactacccattttcatacatcatgaacttgcaatttcatcattaacaaatcatttaacatcaaattaacatattcaaacacatctctacaacataa 6101  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  6100 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactatatgattatgatgaaa 6001  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6000 actaacccccttaccttaattatctccaactattagctc 5962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 178 - 345
Target Start/End: Complemental strand, 5923 - 5756
Alignment:
Q  178 acatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 277  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  278 aaagaattaactaaatgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactattagctc 5756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 24717079 - 24716741
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  24717079 catcatcaacaatatgactaaacatcaacaacaaccattgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 24716980  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24716979 tacaaactatccattttcatacatcgtgaacttgcaatttcattatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccatataa 24716880  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24716879 ccacgaatttcaaagatcgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaag 24716780  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24716779 actaacccccttaccttaattatcaccaactattagctc 24716741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 8 - 324
Target Start/End: Complemental strand, 41507025 - 41506709
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41507025 atcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 41506926  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41506925 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataag 41506826  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41506825 cacggatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaa 41506726  T
Q  308 ctaacccccttacctta 324  Q
    |||||||||||||||||    
T  41506725 ctaacccccttacctta 41506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 346
Target Start/End: Original strand, 39115314 - 39115652
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  39115314 atcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacgattcatcaacaactatgcataattcaccaattgagcataattt 39115413  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  39115414 acaaattacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctttacaacataag 39115513  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39115514 cacgaatgtcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgatgaaaa 39115613  T
Q  308 ctaacccccttaccttaattatcaccaactattagctca 346  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  39115614 ctaacacccttaccttaattattaccaactattagctca 39115652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 33 - 345
Target Start/End: Original strand, 274507 - 274819
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatca 132  Q
    ||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  274507 aacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcatacatca 274606  T
Q  133 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  274607 tgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcat 274706  T
Q  233 gataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatcac 332  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  274707 gataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctc 274806  T
Q  333 caactattagctc 345  Q
    |||||||||||||    
T  274807 caactattagctc 274819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 33 - 345
Target Start/End: Complemental strand, 641342 - 641030
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatca 132  Q
    ||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  641342 aacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcatacatca 641243  T
Q  133 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  641242 tgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcat 641143  T
Q  233 gataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatcac 332  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  641142 gataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctc 641043  T
Q  333 caactattagctc 345  Q
    |||||||||||||    
T  641042 caactattagctc 641030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 33 - 345
Target Start/End: Complemental strand, 827148 - 826836
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatca 132  Q
    ||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  827148 aacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttacaaactacacattttcatacatca 827049  T
Q  133 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  827048 tgaacttgcaatttcatcatcaacaattcatttagcatcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcat 826949  T
Q  233 gataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatcac 332  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  826948 gataataacttattctcataatcaattatgcataggacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctc 826849  T
Q  333 caactattagctc 345  Q
    |||||||||||||    
T  826848 caactattagctc 826836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 24385912 - 24385652
Alignment:
Q  64 aattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcat 163  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24385912 aattcatcaacaacaatgcttaattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcat 24385813  T
Q  164 ttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgc 263  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24385812 ttaacatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattatgc 24385713  T
Q  264 atagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  24385712 atagaacaagagaaaaggaattaactaaatgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 22321587 - 22321437
Alignment:
Q  83 ataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22321587 ataattcaccaattgagcataatttacaaactacccattttcatacgtcatgaacttgcaatttcatcatcaacaattcaattaacatcaaattaacata 22321488  T
Q  183 ttcaaacatatctctaccacataagcacgaatttcaaagattgggttcatg 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  22321487 ttcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 324
Target Start/End: Complemental strand, 21259630 - 21259391
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| |||||||||| |||| |||||||||||||||  ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| |    
T  21259630 aattcatcaattgagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatact 21259531  T
Q  185 caaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaat 284  Q
    |||||||||| |||| |||| |||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| ||||||  |  |||    
T  21259530 caaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagtagaaat 21259431  T
Q  285 taactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||| |||||||||| ||  |||||||||||||||||    
T  21259430 taactaagtgattatgatgaattctaacccccttacctta 21259391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 27 - 189
Target Start/End: Complemental strand, 16039078 - 16038916
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16039078 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttacaaactacccattttcat 16038979  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaac 189  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||    
T  16038978 acatcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacatactcaaac 16038916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 328
Target Start/End: Original strand, 17502274 - 17502521
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||||| ||||||| ||||||||||| |||  ||||||||||||| |||||||||||||| ||||||||| | | ||||||||||||||    
T  17502274 cataattcatcaattgaacataattcacaaactacccttttatatacatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 17502373  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  17502374 actcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatagaaaaagagagaaga 17502473  T
Q  282 aattaactaaatgattatg-ataaaaactaacccccttaccttaatta 328  Q
    || ||||||| ||||||||  | ||| |||||||||||| || |||||    
T  17502474 aactaactaagtgattatgcttgaaatctaacccccttatctcaatta 17502521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 82 - 300
Target Start/End: Original strand, 23217990 - 23218208
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||||| ||||||| |||||||| ||||||  ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||    
T  23217990 cataattcatcaattgaacataattcacaaactagccatttatatacatcattaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 23218089  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| |||||||||||||||||||||||||  |||||||||  ||||||||||||||  |||| || |||||||||||| |||||| ||      
T  23218090 actcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaaga 23218189  T
Q  282 aattaactaaatgattatg 300  Q
    || ||||||| ||||||||    
T  23218190 aactaactaagtgattatg 23218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 276
Target Start/End: Original strand, 4233968 - 4234162
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| |||||||  |||||| |||||||||||||||  ||||||||| ||| |||||||||||||| ||||||||| | | ||||||||||||||    
T  4233968 cataattcatcaattgaaaataattcacaaactacccatttatatacatcataaacatgcaatttcatcattaacaattcaatcatcatcaaattaacat 4234067  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 276  Q
    | ||||||||||| || | |||| ||||| ||||||||||||||||||||  ||||||||||||||  |||| || |||||||||||| ||||||    
T  4234068 actcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatagaaaaagaga 4234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 22235011 - 22234890
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  22235011 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 22234912  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  22234911 cacaca-tacccattttcataca 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 19993262 - 19993141
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||  ||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  19993262 atcatcaacaacatgactaaacaacaacaacaacaattgatgatgaaatttatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 19993163  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  19993162 cacaca-tacccattttcataca 19993141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 41246697 - 41246792
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| |||| |||||||| | |||||| ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  41246697 atcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattaagcata 41246792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 37611719 - 37611829
Alignment:
Q  20 atgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-taccc 118  Q
    |||||| |||| |||||||||| |||||| ||||||| | ||| |||||||||||||| | ||||||||||||||||||||||| |||  | || |||||    
T  37611719 atgacttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgagcatattttcaacacataccc 37611818  T
Q  119 attttcataca 129  Q
    |||||||||||    
T  37611819 attttcataca 37611829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 18118376 - 18118259
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggt 228  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||||||| | |||  ||||||||||||||  |||  |||||||||||||| ||||  ||    
T  18118376 atcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatttatatacgcaaacatatctctataacacgagcacgaatttcaacgattaagt 18118277  T
Q  229 tcatgataatcacttatt 246  Q
    |||  |||||||||||||    
T  18118276 tcacaataatcacttatt 18118259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 21494592 - 21494452
Alignment:
Q  92 caattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 191  Q
    ||||| ||||||||||   |||||||| ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||  |    
T  21494592 caattaagcataatttcacaactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaatt 21494493  T
Q  192 atctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    ||| | |  |||  |||||||| ||||||||||||||||||    
T  21494492 atcaccaaaacaagagcacgaaattcaaagattgggttcat 21494452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 22886440 - 22886590
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    |||| |||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  22886440 catagttcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 22886539  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||  | |  |||  |||||||| |||||||||||| |||||    
T  22886540 actcaaacttattaccaaaacaagagcacgaaattcaaagattggattcat 22886590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 22147555 - 22147664
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  22147555 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 22147654  T
Q  185 caaacatatc 194  Q
    ||||| ||||    
T  22147655 caaacttatc 22147664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 2545061 - 2545167
Alignment:
Q  83 ataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 182  Q
    |||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||  ||  ||||||||| |||||||||||||| |||  ||||||||||    
T  2545061 ataattcatcaattaagcataattttacaactacccattttcacacattatgaatatgttatttcatcaccaacaattcatttatcattcaattaacata 2545160  T
Q  183 ttcaaac 189  Q
     ||||||    
T  2545161 ctcaaac 2545167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 16404932 - 16404879
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  16404932 atgattatgatgaagactaacccccttaccttaattatctccaactattagctc 16404879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 18612523 - 18612632
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  18612523 aattcatcaattaagcataatttcataacaatccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 18612622  T
Q  185 caaacatatc 194  Q
    ||||| ||||    
T  18612623 caaacttatc 18612632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 18619428 - 18619537
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  18619428 aattcatcaattaagcataatttcataacaatccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 18619527  T
Q  185 caaacatatc 194  Q
    ||||| ||||    
T  18619528 caaacttatc 18619537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 20481646 - 20481739
Alignment:
Q  10 catcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| || |||||| |||| |||||||| | |||||| ||| ||| ||||| |||||||||||||| | | |||||||||||||||||||||    
T  20481646 catcaacaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgagcata 20481739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 16002113 - 16002223
Alignment:
Q  85 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatat 183  Q
    |||||| ||||| ||||| |||||||||  ||| |||||||| | ||||||||| | ||||||||||| |||||||| | ||| ||||||||| | |||     
T  16002113 aattcaacaattagagcacaatttacaatatactcattttcacatatcatgaacatacaatttcatcaacaacaattaaattatcatcaaattcatatac 16002212  T
Q  184 tcaaacatatc 194  Q
    |||||||||||    
T  16002213 tcaaacatatc 16002223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 3431422 - 3431317
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| || ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  3431422 cataagtcatcaattaagcataatttcacaacaactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 3431323  T
Q  182 attcaa 187  Q
    | ||||    
T  3431322 actcaa 3431317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 20573376 - 20573305
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | | |||||||||||||||||||||    
T  20573376 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattgagcata 20573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 20561804 - 20561740
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||| | ||||||||    
T  20561804 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataattt 20561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 20648002 - 20647938
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||| | ||||||||    
T  20648002 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattaaacataattt 20647938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 20654078 - 20654018
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||| ||||||    
T  20654078 attgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaattaagcata 20654018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 22981281 - 22981358
Alignment:
Q  59 atcaaaattcatcaacaaccatg-cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaa 136  Q
    ||||||||||| ||||||| ||| || |||||| |||||||| | |||| |||||||||||||||  ||||||||||||    
T  22981281 atcaaaattcaacaacaac-atgtcacaattcatcaattgagtacaattcacaaactacccatttatatacatcatgaa 22981358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 31194251 - 31194217
Alignment:
Q  290 aaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||||    
T  31194251 aaatgattatgatgaaaactaacccccttacctta 31194217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 13662214 - 13662182
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  13662214 atgattatgataataactaacccccttacctta 13662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 13720877 - 13720845
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  13720877 atgattatgataataactaacccccttacctta 13720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16873000 - 16872968
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  16873000 atgattatgataataactaacccccttacctta 16872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 43373424 - 43373392
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  43373424 atgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 345
Target Start/End: Original strand, 21860049 - 21860387
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21860049 catcatcaacaatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 21860148  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860149 tacaaactactcattttcattcatcatgaacttgcaatttcatcattaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 21860248  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21860249 gtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaa 21860348  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  21860349 actaacccccttaccttaattatctccaactattagctc 21860387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 44035188 - 44034850
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    |||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  44035188 catcatcaactatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcataatt 44035089  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  44035088 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcattaaacatcaaattaacatattcaaacatatatctacaacataa 44034989  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034988 acaagaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 44034889  T
Q  307 actaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44034888 actaacccccttaccttaattatctccaactattagctc 44034850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 7 - 323
Target Start/End: Complemental strand, 15861641 - 15861327
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15861641 catcatcaacaatatgactaaaca--aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 15861544  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15861543 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataa 15861444  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  15861443 gcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaag 15861344  T
Q  307 actaacccccttacctt 323  Q
    |||||||||||||||||    
T  15861343 actaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 22367057 - 22367296
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  22367057 catcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcata-ttcaccaattgagcataatt 22367155  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22367156 tacaaactactcattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataa 22367255  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattc 247  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22367256 gcacgaatttcaaagattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 231 - 346
Target Start/End: Original strand, 41218667 - 41218782
Alignment:
Q  231 atgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatc 330  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttaccttaattatc 41218766  T
Q  331 accaactattagctca 346  Q
    ||||||||||||||||    
T  41218767 accaactattagctca 41218782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 22403318 - 22403196
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || |||||| |||| ||||||||||  || || ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  22403318 atcatcaacaacatgacttaacaacaacaacaacagttaatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 22403219  T
Q  108 acaaac-tacccattttcataca 129  Q
      | || ||||||||||||||||    
T  22403218 caacacatacccattttcataca 22403196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 49967689 - 49967784
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| |||| |||||||| | |||||| ||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||    
T  49967689 atcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgagcata 49967784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 41212130 - 41212206
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||||| |||||| ||||||||||||| ||||||||||||||  |||||||||||| |||||||||||    
T  41212130 aacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgagcata 41212206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 41394527 - 41394580
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  41394527 atgattatgataaagactaacccccttaccttaattatctccaactattagctc 41394580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 20254430 - 20254539
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| || ||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  20254430 aattcatcaattaagcataatttcataacaactcattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 20254529  T
Q  185 caaacatatc 194  Q
    ||||| ||||    
T  20254530 caaacttatc 20254539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 21650181 - 21650076
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  21650181 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 21650082  T
Q  182 attcaa 187  Q
    | ||||    
T  21650081 actcaa 21650076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 35522503 - 35522432
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||||||||||    
T  35522503 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 35522432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 27329944 - 27329868
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| |||||||| ||||||| ||||| |||| | |||||||   |||||||||||||||||||||||    
T  27329944 aacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 27329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 35054814 - 35054890
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| |||||||| ||||||| ||||| | ||||||||| ||   |||||||||||||||||||||||    
T  35054814 aacaacaacaacatccattgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgagcata 35054890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 21718291 - 21718362
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| || |||||||||||   |||||||||||||||||||||||    
T  21718291 caacaacatcaattgatcatgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcata 21718362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 40436367 - 40436291
Alignment:
Q  118 cattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    |||||||| | || |||||| ||||||||||||| |||||||||| ||| || ||| || | |||||||||||||||    
T  40436367 cattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatatattcaaacatatc 40436291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 27675120 - 27675161
Alignment:
Q  294 gattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    
T  27675120 gattatgataaattctaacccccttaccttaattatctccaa 27675161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaa 325  Q
    |||||||||||||| |||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 20194140 - 20194232
Alignment:
Q  85 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 176  Q
    |||||| ||||| ||||| |||| ||||  |||||||| ||| | || |||||| ||||||||||||| |||||||||| ||| || ||||||    
T  20194140 aattcaacaattagagcacaattcacaatatacccattatcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaatt 20194232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 37844406 - 37844374
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  37844406 atgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 46523695 - 46523727
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  46523695 atgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 290; Significance: 1e-163; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 7 - 323
Target Start/End: Original strand, 11342722 - 11343039
Alignment:
Q  7 catcatcaaaaatatgactaaacat-caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataat 105  Q
    ||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11342722 catcatcaacaatatgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 11342821  T
Q  106 ttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacata 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11342822 ttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacata 11342921  T
Q  206 agcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342922 agcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaa 11343021  T
Q  306 aactaacccccttacctt 323  Q
    ||||||||||||||||||    
T  11343022 aactaacccccttacctt 11343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 8 - 324
Target Start/End: Original strand, 2031849 - 2032165
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2031849 atcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataattt 2031948  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataag 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2031949 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataag 2032048  T
Q  208 cacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaa 307  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  2032049 cacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaacgattatgatgaaaa 2032148  T
Q  308 ctaacccccttacctta 324  Q
    |||||||||||||||||    
T  2032149 ctaacccccttacctta 2032165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 27 - 311
Target Start/End: Original strand, 21204984 - 21205268
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21204984 aacaacaacaacaaatattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 21205083  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  21205084 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 21205183  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  21205184 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaa 21205268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 21650753 - 21651050
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21650753 aacaacaacaacatctattgatcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 21650852  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21650853 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 21650952  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  21650953 gttcatgataatcacttattcccataatcaactatgcacagaacaagagaaaaagaattaaccaaatgattatgataaatattaacccccttacctta 21651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 82 - 324
Target Start/End: Original strand, 16105757 - 16105999
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| |||||||    
T  16105757 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacat 16105855  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 280  Q
    || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16105856 atccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 16105955  T
Q  281 gaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||  |||||||||||||||| ||||||||||||||||||    
T  16105956 gaattaatcaaatgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 94 - 246
Target Start/End: Complemental strand, 22662805 - 22662653
Alignment:
Q  94 attgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatat 193  Q
    ||||| |||||||  ||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  22662805 attgaacataattctcaaactacccatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatattcaaatatat 22662706  T
Q  194 ctctaccacataagcacgaatttcaaagattgggttcatgataatcacttatt 246  Q
    | |||| |||| ||||||||||||||||||||||||||  |||||||||||||    
T  22662705 cactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 82 - 320
Target Start/End: Original strand, 25004929 - 25005165
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| |||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| ||| | | |||||||||     
T  25004929 cataaatcaccaattgagcataattctcaaactacccatttacatacatcatgaacatgcaatttcataattaacaattcaattatccttaaattaacac 25005028  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| || | |||| ||||||||||||||||||||||||||  ||||||||||||||   | | || |||| |||| |||||  |||||      
T  25005029 actcaaacatatcacttcaacatgagcacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcatacaacaattgaaaa-- 25005126  T
Q  282 aattaactaaatgattatgataaaaactaacccccttac 320  Q
    | | ||||||||||||||||| || ||||||||||||||    
T  25005127 actaaactaaatgattatgatgaagactaacccccttac 25005165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 28261572 - 28261655
Alignment:
Q  20 atgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    ||||||||||| |||||||||| |||||| || |||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  28261572 atgactaaacaacaacaacaacaattgatcataaaacatatcacaatttatcaacaacaatgcataattcaccaattgagcata 28261655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 21646935 - 21646826
Alignment:
Q  20 atgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-taccc 118  Q
    ||||||||||| ||||| |||| |||||| ||||||||||||| |||||||||||||| || ||||||||||||||||| ||| |||| || || |||||    
T  21646935 atgactaaacaacaacagcaacaattgatcatgaaacatatcacaattcatcaacaacgatacataattcaccaattgaacat-attttcatacataccc 21646837  T
Q  119 attttcataca 129  Q
    |||||||||||    
T  21646836 attttcataca 21646826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 21397156 - 21397253
Alignment:
Q  33 aacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    ||||||||| |||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  21397156 aacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 21397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 11584090 - 11584188
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccat---gcataattcaccaattgagcata 103  Q
    ||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||| |    |||||||||||||||||||||||    
T  11584090 atcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaattgagcata 11584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 4865302 - 4865397
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||| |||||| | | |||||| |||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  4865302 atcatcaacaacatgaataaacaaccataacaacaattgatcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgagcata 4865397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 7529014 - 7529164
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  7529014 cataattcatcaattaagcataatttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 7529113  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||| | |  |||  |||||||| ||||| | ||||||||||    
T  7529114 actcaaacttatcaccaaaacaagagcacgaaattcaagggttgggttcat 7529164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 24475622 - 24475738
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||   ||||| |||||||||| |||  |||||||||||| ||||||||||||||||||||||||| |||    
T  24475622 atcatcaacaacatgactaaacaacaacaacaa---ttgatcatgaaacataacaa--ttcatcaacaacaatgcataattcaccaattgagcatatttt 24475716  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  24475717 cacaca-tacccattttcataca 24475738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 1168412 - 1168317
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||    
T  1168412 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgagcata 1168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 17909622 - 17909731
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |    
T  17909622 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatact 17909721  T
Q  185 caaacatatc 194  Q
    ||||| ||||    
T  17909722 caaacttatc 17909731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 20712117 - 20712210
Alignment:
Q  10 catcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| || |||||| |||| |||||||| | |||||| ||| ||| ||||| |||||||||||||| | |||||||||||||||||||||||    
T  20712117 catcaacaacatgacttaacaacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgagcata 20712210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 9730524 - 9730419
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  9730524 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 9730425  T
Q  182 attcaa 187  Q
    | ||||    
T  9730424 actcaa 9730419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 11584374 - 11584427
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||| ||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactca 11584427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 108974 - 108862
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| | |||||||||||||| |||||| ||  | ||||||| |||||||||||||| |||  |||||||||    
T  108974 cataagtcatcaattaagcataatttcacaacaatccattttcatacattatgaacatgttaattcatcaccaacaattcatttatcattcaattaacat 108875  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  108874 actcaaacttatc 108862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 24183305 - 24183245
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| |||||||  |||| |||||| ||||||| | |||||||||||||||||||||||    
T  24183305 attgatcatgaaactcatcacaattcaacaacaacaaagcataattcaccaattgagcata 24183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 11337370 - 11337299
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||||||    ||||||||||||| ||||||||    
T  11337370 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattcaccaaatgagcata 11337299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 21906780 - 21906851
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||| ||||||| ||||    
T  21906780 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcatcaattgaacata 21906851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 7425631 - 7425663
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  7425631 atgattatgataataactaacccccttacctta 7425663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 23507270 - 23507302
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  23507270 atgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 35791047 - 35791015
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  35791047 atgattatgataataactaacccccttacctta 35791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 7 - 324
Target Start/End: Original strand, 14951800 - 14952117
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14951800 catcatcaacaatatgactaaataacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 14951899  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14951900 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataa 14951999  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14952000 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaag 14952099  T
Q  307 actaacccccttacctta 324  Q
    ||||||||||||||||||    
T  14952100 actaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 7 - 346
Target Start/End: Complemental strand, 5682744 - 5682406
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| ||||||| |||| | |||||||||||| | || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5682744 catcatcaacaatatgaataaaaaacaacaacaaccaataatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 5682645  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682644 tacaaactacccaatttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 5682545  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  5682544 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaggaaaa-aattaactaaatgattatgataaaa 5682446  T
Q  307 actaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  5682445 actaacccacttaccttaattatcaccaactattagctca 5682406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 11 - 345
Target Start/End: Complemental strand, 25119420 - 25119086
Alignment:
Q  11 atcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttaca 110  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  25119420 atcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcataatttaca 25119321  T
Q  111 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcac 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25119320 aactatccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcac 25119221  T
Q  211 gaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaacta 310  Q
    ||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25119220 gaattttcaagattgggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaaaacta 25119121  T
Q  311 acccccttaccttaattatcaccaactattagctc 345  Q
    || ||||||||||||||||| ||||||||||||||    
T  25119120 actcccttaccttaattatctccaactattagctc 25119086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 15272509 - 15272211
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272509 aacaacaacaacatctattgatcatggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 15272410  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  15272409 acatcatgaacttgcaatttcatcatcaaccattcgtttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 15272310  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  15272309 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 93 - 328
Target Start/End: Original strand, 19559483 - 19559719
Alignment:
Q  93 aattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacata 192  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  19559483 aattgagcataattcacaaactacccatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaacatcaaattaacatgctcaaacata 19559582  T
Q  193 tctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaa 292  Q
    || |||| |||| |||| ||||||||||  |||||| ||| ||||||||||||||  |||| || |||||||||||| |||||| ||  ||||||||||     
T  19559583 tcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcatagaaaaagagagaagaaattaactaat 19559682  T
Q  293 tgattatg-ataaaaactaacccccttaccttaatta 328  Q
    ||||||||  | ||| ||||||||||||||| |||||    
T  19559683 tgattatgcttgaaatctaacccccttacctcaatta 19559719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 15136010 - 15135907
Alignment:
Q  222 attgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttac 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  321 ctta 324  Q
    ||||    
T  15135910 ctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 82 - 276
Target Start/End: Original strand, 49071800 - 49071994
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| |||||||||||| || |  || ||  ||| | |||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  49071800 cataattcatcaattgagcatatttcatcaagtattcatatacatatatcatgaacatgcaatttcatcatcaataattcaattaacatcaaattaacat 49071899  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagaga 276  Q
    | ||||||||||| |||| | || |||||||||||||| | |||||||||  || |||||||||||  |||| || |||||||||||| ||||||    
T  49071900 actcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcatagaaaaagaga 49071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 247
Target Start/End: Complemental strand, 34177781 - 34177617
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||||||||||| |||||||  ||| ||||||||||  ||||||||||||| |||||||| ||||||||||||||| ||| |||  |||||||||    
T  34177781 cataattcaccaattgaacataattctcaa-ctacccatttatatacatcatgaacatgcaattttatcatcaacaattcaattatcatgtaattaacat 34177683  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattc 247  Q
    | ||||||||||| |||| |||| |||||||||||  |||||||| ||||  ||||||||||||||    
T  34177682 actcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 53704941 - 53704846
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53704941 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcata 53704846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 14500358 - 14500208
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  ||||||||| ||| |||||||||| ||| ||||||||||    
T  14500358 cataattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaataattcatttatcattaaattaacat 14500259  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||| | |  |||  |||||||| ||||||||||||||||||    
T  14500258 actcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 14500208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 8872682 - 8872584
Alignment:
Q  8 atcatcaaaaatatgacta---aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||||   |||| |||||||||| |||||| ||||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  8872682 atcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaacgcataattcaccaattgagcata 8872584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 820100 - 820029
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  820100 caacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcata 820029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 21959671 - 21959576
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  21959671 atcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 21959576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 30457954 - 30458037
Alignment:
Q  20 atgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| |||| |||||||||| |||||| ||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||    
T  30457954 atgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcgtaattcaccaattgagcata 30458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 34395320 - 34395418
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    |||||||| | |||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  34395320 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 34395418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 53907885 - 53907812
Alignment:
Q  30 atcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||||||| |||||| ||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||    
T  53907885 atcaacaacaacaattgatcatgaaacatttcacaattcatcaacaacaatgcataattcaccaattgggcata 53907812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 44346881 - 44346961
Alignment:
Q  23 actaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| ||||||||||  ||||| ||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||    
T  44346881 actaaacaacaacaacaacatttgatcatgaaacatatcacaattcatgaacaacaatgtataattcaccaattgagcata 44346961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 44055954 - 44056049
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||| ||||||  |||||||| | |||||| ||||||| ||||| |||||||||||||  |||||||||||||||||||||||||    
T  44055954 atcatcaacaacatggctaaaccacaacaacatcaattgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 44056049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 23270142 - 23270020
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || |||||| |||| |||||||| | |||||| |||| || ||||| |||||||||||||| |||||||||||| |||||||| ||| |||    
T  23270142 atcatcaacaacatgacttaacaacaacaacatcaattgatcatgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtatatttt 23270043  T
Q  108 acaaac-tacccattttcataca 129  Q
      | || ||||||||||||||||    
T  23270042 caacacatacccattttcataca 23270020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 14996241 - 14996353
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| ||||||||| |||| |||  |||||||||    
T  14996241 cataattcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcttttatcattcaattaacat 14996340  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  14996341 actcaaacttatc 14996353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 16522932 - 16523044
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  16522932 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 16523031  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  16523032 actcaaacttatc 16523044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 55376786 - 55376714
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 99  Q
    |||| |||||||||| |||||| ||||||| ||||| |||||||||||||| ||| |||||||||||||||||    
T  55376786 aacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgtataattcaccaattgag 55376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 21417471 - 21417536
Alignment:
Q  133 tgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctcta 198  Q
    ||||| || ||||||||||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  21417471 tgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacatatctcta 21417536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 32460820 - 32460699
Alignment:
Q  111 aactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcac 210  Q
    |||||||| ||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| |||||  |||  | |  |||  |||||    
T  32460820 aactaccccttttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactcaaaattataaccaaaacaagagcac 32460721  T
Q  211 gaatttcaaagattgggttcat 232  Q
    ||| ||||||||||||||||||    
T  32460720 gaaattcaaagattgggttcat 32460699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 54118200 - 54118147
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  54118200 atgattatgatgaagactaacccccttaccttaattatctccaactattagctc 54118147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 8045058 - 8045170
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| ||||||| |||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  8045058 cataagtcatcaattaagcataatttcacaacaacccattctcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 8045157  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  8045158 actcaaacttatc 8045170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 9295808 - 9295920
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||| | |||||||||||||| |||  |||||||||    
T  9295808 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcattaccaacaattcatttatcattcaattaacat 9295907  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  9295908 actcaaacttatc 9295920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16732208 - 16732303
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||| ||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  16732208 atcatcaacaacatgacttagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 16732303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 9795330 - 9795442
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||||||||| | ||||||||   |||||| |||||| | |||| |||||| ||  ||||||||| ||| |||||||||| |||  |||||||||    
T  9795330 cataattcaccaattaaacataatttcacaactactcattttgacacattatgaacatgttatttcatcaccaagaattcatttatcattcaattaacat 9795429  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  9795430 actcaaacttatc 9795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 12133686 - 12133626
Alignment:
Q  139 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctac 199  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||  |||||||||| ||||    
T  12133686 tgcaatttcatcattaacaattcaattaacaacaaattaacatacccaaacatatcactac 12133626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 30232685 - 30232609
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| |||||||| ||||||| ||||| |||| | |||||||   |||||||||||||||||||||||    
T  30232685 aacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 30232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 12837389 - 12837313
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| |||||||  ||||||| ||||| |||| | |||||||   |||||||||||||||||||||||    
T  12837389 aacaacaacaacatccattgaccatgaaacttatcacaatttaacaacaacatagcataattcaccaattgagcata 12837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 16225301 - 16225211
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 176  Q
    |||||| ||||||||||||||| |||||||||||||||  |||  |||||||| || ||||| | || ||||||||||  || |||||||||    
T  16225301 aattcatcaattgagcataattcacaaactacccatttatata-ttcatgaacatgtaatttaaacaacaacaattcaaataccatcaaatt 16225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 19697514 - 19697408
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||| || |||| |||||||| |||||| ||  ||||||| |  ||||||||||||| |||  |||||||||    
T  19697514 cataattcatcaattaagcataatttcataacaactcattctcatacattatgaacatgttatttcataactaacaattcatttatcattcaattaacat 19697415  T
Q  182 attcaaa 188  Q
    | |||||    
T  19697414 actcaaa 19697408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 19708099 - 19707993
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||| || |||| |||||||| |||||| ||  ||||||| |  ||||||||||||| |||  |||||||||    
T  19708099 cataattcatcaattaagcataatttcataacaactcattctcatacattatgaacatgttatttcataactaacaattcatttatcattcaattaacat 19708000  T
Q  182 attcaaa 188  Q
    | |||||    
T  19707999 actcaaa 19707993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 14996445 - 14996478
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaa 325  Q
    ||||||||||||| ||||||||||||||||||||    
T  14996445 atgattatgataataactaacccccttaccttaa 14996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 41165883 - 41165838
Alignment:
Q  290 aaatgattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    ||||||||||||| ||  ||||||||||||| ||||||||||||||    
T  41165883 aaatgattatgatgaattctaacccccttacgttaattatcaccaa 41165838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 7132014 - 7131982
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  7132014 atgattatgataataactaacccccttacctta 7131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 13246737 - 13246769
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  13246737 atgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15287194 - 15287162
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  15287194 atgattatgataataactaacccccttacctta 15287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 15294303 - 15294271
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  15294303 atgattatgataataactaacccccttacctta 15294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 17145606 - 17145574
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  17145606 atgattatgataataactaacccccttacctta 17145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 20001030 - 20001062
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttacctta 20001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 280; Significance: 1e-157; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 162396 - 162057
Alignment:
Q  7 catcatcaaaaatatgactaaacat-caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataat 105  Q
    ||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  162396 catcatcaacaatatgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataat 162297  T
Q  106 ttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacata 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||||    
T  162296 ttacaaactacccatttacatacatcatgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacata 162197  T
Q  206 agcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  162196 agcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaa 162097  T
Q  306 aactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  162096 aactaacccccttaccttaattatctccaactattagctc 162057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 32 - 345
Target Start/End: Complemental strand, 166456 - 166143
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatc 131  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  166456 caacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttacaaactacccatttacatacatc 166357  T
Q  132 atgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttca 231  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  166356 atgaacttgcaatttcatcatcaacaaatcatttaatatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttca 166257  T
Q  232 tgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatca 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  166256 tgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactagatgattatgatgaaaactaacccccttaccttaattatct 166157  T
Q  332 ccaactattagctc 345  Q
    ||||||||||||||    
T  166156 ccaactattagctc 166143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 164256 - 164349
Alignment:
Q  10 catcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| || ||||||||||| ||||||||||  ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  164256 catcaacaacatgactaaacaacaacaacaacatttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 164349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 116485 - 116440
Alignment:
Q  290 aaatgattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  116485 aaatgattatgatgaaatctaacccccttaccttaattatcaccaa 116440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 7 - 346
Target Start/End: Complemental strand, 668 - 330
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||||||| ||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  668 catcatcaacaatatgagtaaatatcaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 569  T
Q  107 tacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataa 206  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  568 tacaaactattcattttcatacatcatgaacttgcaatttcatcatctacaattcatttaacatcaaattaacatattcaaatatatctctacaacataa 469  T
Q  207 gcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaa 306  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||     
T  468 gcacaaatttcaaatattgggttcatgataatcacttattctcataatcaattatgcatagaacaagag-aaaagaattaactagatgattatgataaag 370  T
Q  307 actaacccccttaccttaattatcaccaactattagctca 346  Q
    | ||||||| ||||||||||||||||||||||||||||||    
T  369 aataaccccgttaccttaattatcaccaactattagctca 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 258; Significance: 1e-143; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 27 - 324
Target Start/End: Original strand, 55639 - 55936
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55639 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcct 55738  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  55739 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgg 55838  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55839 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 221 - 324
Target Start/End: Complemental strand, 108179 - 108075
Alignment:
Q  221 gattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  320 cctta 324  Q
    |||||    
T  108079 cctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 346
Target Start/End: Original strand, 30130 - 30471
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgca---taattcaccaattgagcataa 104  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||   | |  || |||||||||||||    
T  30130 atcatcaacaatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatacaatttcaaacaacaattgagcataa 30229  T
Q  105 tttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30230 tttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacat 30329  T
Q  205 aagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataa 304  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  30330 aagcatgaatttcaaagatagggttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaataattaactaaatgattatgatga 30429  T
Q  305 aaactaacccccttaccttaattatcaccaactattagctca 346  Q
    ||| ||||||||||||||||||||||||||| ||||| ||||    
T  30430 aaaataacccccttaccttaattatcaccaattattaactca 30471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 1175 - 878
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1175 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 1076  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||||    
T  1075 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaaagattgg 976  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  975 gttcatgataatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 252; Significance: 1e-140; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 324
Target Start/End: Complemental strand, 12736 - 12418
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    ||||||||  ||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  12736 atcatcaaccatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataattt 12637  T
Q  108 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattca--tttaacatcaaattaacatattcaaacatatctctaccacata 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||| |||||    
T  12636 acaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcacattaatcatcaaattaacatattcaaacatatctctacaacata 12537  T
Q  206 agcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaa 305  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12536 agcacaaatttcaaagattgggttcatgataataacttattcccataatcaattatgcatagaacaaaagaaaaagaattaactaaatgattatgataaa 12437  T
Q  306 aactaacccccttacctta 324  Q
    |||||||||||||||||||    
T  12436 aactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 19117 - 19049
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaa 76  Q
    ||||||||  ||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||||    
T  19117 atcatcaaccatatgactaaacaacaacaacaaccattaatcatgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 251; Significance: 1e-139; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 13583 - 13285
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13583 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 13484  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  13483 acatcatgaacttgcaatttcatcatcaaccattcatttaacatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgg 13384  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  13383 gttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 21557 - 21432
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21557 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 21458  T
Q  127 acatcatgaacttgcaatttcatcat 152  Q
    ||||||||||||||||||||||||||    
T  21457 acatcatgaacttgcaatttcatcat 21432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 17601 - 17304
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17601 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 17502  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17501 acatcatgaacttgcaatttcatcatcaacaattcatttaaaatcaaattaacatattcaaacatatctctaccacataagcactaatttcaaagattgg 17402  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  17401 gttcatgataatcaattattctcataatcaattatgcatagaacaagagaaaaagaattacctaaatgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 43 - 324
Target Start/End: Complemental strand, 6724 - 6443
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgca 142  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6724 attgatcatcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgca 6625  T
Q  143 atttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcact 242  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||     
T  6624 atttcatcatcaacaattcatttgacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataagcacc 6525  T
Q  243 tattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6524 tattatcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 223; Significance: 1e-123; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 27 - 325
Target Start/End: Complemental strand, 193684 - 193396
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193684 aacaacaacaacatctattgatcatgaaacatatcacaata-atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 193586  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||    
T  193585 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctct---------gcacgaatttcaatgattgg 193495  T
Q  227 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaa 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  193494 gttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 27 - 190
Target Start/End: Complemental strand, 186722 - 186560
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186722 aacaacaacaacatctattgatcatgaaacatatcacaata-atcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 186624  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaaca 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186623 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaaca 186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 78 - 324
Target Start/End: Complemental strand, 4593 - 4346
Alignment:
Q  78 catgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatta 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4593 catgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatta 4494  T
Q  178 acatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagaga 276  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||    
T  4493 acatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatagaatgaagaga 4394  T
Q  277 aaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||    
T  4393 aaaagaattaaccaaatgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 43 - 247
Target Start/End: Complemental strand, 209 - 5
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgca 142  Q
    |||||| ||||||| ||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  209 attgatcatgaaacttatcataattcatcaattattatgcataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgca 110  T
Q  143 atttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcact 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  109 atttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcact 10  T
Q  243 tattc 247  Q
    |||||    
T  9 tattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 10163 - 9882
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| |||||||| ||||||| ||||| |||||||||||||||| ||||||||| ||||||                 |||||||||||||    
T  10163 aacaacaacaacatccattgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt-----------------tacccattttcat 10081  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10080 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 9981  T
Q  227 gttcatgataatcacttattctcataatcaa-ttatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9980 gttcatgataatcacttattttcataatcaatttatgcatagaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 15007 - 15236
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  15007 aacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttacaaaataaacattttcat 15106  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgg 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15107 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgg 15206  T
Q  227 gttcatgataatcacttattctcataatca 256  Q
    ||||||||||||||||||||| ||||||||    
T  15207 gttcatgataatcacttattcccataatca 15236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 914 - 882
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  914 atgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 82 - 323
Target Start/End: Original strand, 130670 - 130911
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| |   |||||||||||||| |||||||||||||||| ||||| |    
T  130670 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatattatttcatcatcaaccattcatttaacatcaa-ttaacgt 130768  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaa-caagagaaaaa 280  Q
    || ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  130769 atccaaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaa 130868  T
Q  281 gaattaactaaatgattatgataaaaactaacccccttacctt 323  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  130869 gaattaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 89653 - 89578
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| | |||| | ||||||| ||||| |||| | ||||||| | ||||||||||||||||||||| |||||    
T  89653 caacaacatcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgagcacaattt 89578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 183 - 345
Target Start/End: Original strand, 42568 - 42727
Alignment:
Q  183 ttcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 282  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 42667  T
Q  283 attaactaaatgattatgataaaaactaacccccttaccttaattatcaccaactattagctc 345  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||    
T  42668 attaactaaatgattatgataaaaactaacccccttacct---ttatctccaactattagctc 42727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 328
Target Start/End: Complemental strand, 44256 - 44009
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||  ||||||||||||| | |||||||||  |||| |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  44256 cataattcgtcaattgagcataactcacaaactacttatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaccatcaaattaacat 44157  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| |||| |||| ||||||||||||||||||| ||||||  ||||||||||||||  ||||||| |||||||||| | |||||| ||      
T  44156 actcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcacttatgcatagcaaaagagagaaga 44057  T
Q  282 aattaactaaatgattatga-taaaaactaacccccttaccttaatta 328  Q
    |||||||||| ||||||||| | ||| |||||||| |||||| |||||    
T  44056 aattaactaagtgattatgattgaaatctaaccccgttacctcaatta 44009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 335
Target Start/End: Complemental strand, 1643 - 1393
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| |||||||||||||||  |||||||| |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  1643 cataattcatcaattgagcataattctcaaactactcatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacat 1544  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaag 281  Q
    | ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||| ||||||   ||| || |||| |||| |||||  ||||       
T  1543 actcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattcaattaagcacttattcatacaacaaatgaaa--- 1447  T
Q  282 aattaactaaatgattatgataaaaactaacccccttaccttaattatcaccaa 335  Q
    | |  |||||||||||||||| ||  ||||||||||||||| ||||||||||||    
T  1446 actacactaaatgattatgatgaattctaacccccttacctcaattatcaccaa 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 9704 - 9537
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaactacccattttcat 126  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  9704 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcataatttacaaactacccattttcat 9605  T
Q  127 acatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    ||||||| |||||||||||||||||||||||||||||||| ||   |||||||||| |||||| ||||    
T  9604 acatcataaacttgcaatttcatcatcaacaattcatttagcaatcaattaacatactcaaacttatc 9537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 219 - 384
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||||||||||||| ||||||||| |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  219 cataattcaacaattgagcataattcacaaactacacatttatatacatcatgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacat 318  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattc 247  Q
    | ||||||||||| |||| |||| |||| |||||||||||||||||||||  ||||||||||||||    
T  319 actcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattc 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 95038 - 95204
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttac----aaactacccattttcata 127  Q
    |||||||| | |||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    |||||| | |||||||||    
T  95038 caacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttacaaataaactatctattttcata 95137  T
Q  128 catcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||| ||||    
T  95138 catcatgaacttgcaatttcatcatcaacaattcatttatcattcaattaacatactcaaacttatc 95204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 24917 - 24841
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  24917 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 24841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 84 - 328
Target Start/End: Complemental strand, 3981 - 3732
Alignment:
Q  84 taattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatat 183  Q
    ||||||| ||||||| ||||||| |||||||||||||||  ||| ||||||||| |||||||||||||| ||||||||| | | |||||||||||||||     
T  3981 taattcatcaattgaacataattcacaaactacccatttatatatatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatac 3882  T
Q  184 tcaaac----atatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaa 279  Q
    ||||||    ||||| |||| |||| |||||||||||||||  |||| ||||  ||||||||||||||  |||| || |||||||||||| |||||| ||    
T  3881 tcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgcatagaaaaagagagaa 3782  T
Q  280 agaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 328  Q
      || ||||||| ||||||||  | ||| |||||||| |||||| |||||    
T  3781 gaaactaactaagtgattatgcttgaaatctaacccctttacctcaatta 3732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 5996 - 6133
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| |||||||||| |||| ||||||||||||||| | || ||||||||| |||||||||||||||||||||||| ||| |||||| |||||||    
T  5996 cataaatcatcaattgagcacaattcacaaactacccatttacttatatcatgaacatgcaatttcatcatcaacaattcaattatcatcaatttaacat 6095  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaa 219  Q
    | ||||||||||| |||| |||| ||||| ||||||||    
T  6096 actcaaacatatcactacaacatgagcacaaatttcaa 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 32242 - 32363
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||    
T  32242 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcat-attt 32340  T
Q  108 acaaac-tacccattttcataca 129  Q
     ||||| ||||||||||||||||    
T  32341 tcaaacatacccattttcataca 32363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 42061 - 41940
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||    
T  42061 atcatcaacaacatgactaaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgagcatatttt 41962  T
Q  108 acaaac-tacccattttcataca 129  Q
     ||||| ||||||||||||||||    
T  41961 -caaacatacccattttcataca 41940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 17812 - 17962
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   |||||||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  17812 cataattcatcaattaagcataatttcacaactacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 17911  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||| | |  |||  |||||||| ||||||||||||||||||    
T  17912 actcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 17962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 14916 - 15034
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||||||||||| |||||||||   ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  14916 atcatcaacaacatgactaaacaacaacaacaa---ttgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcatatttt 15012  T
Q  108 -acaaactacccattttcataca 129  Q
     ||| | ||||||||||||||||    
T  15013 cacaca-tacccattttcataca 15034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 15660 - 15584
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  15660 aacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgagcata 15584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 15398 - 15348
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagc 343  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagc 15348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 36869 - 36836
Alignment:
Q  292 atgattatgataaaaactaacccccttaccttaa 325  Q
    |||||||||||||| |||||||||||||||||||    
T  36869 atgattatgataaagactaacccccttaccttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 7056 - 6932
Alignment:
Q  8 atcatcaaaaatatgacta---aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataa 104  Q
    |||||||| || |||||||   |||| |||||||||| |||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||     
T  7056 atcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatat 6957  T
Q  105 ttt-acaaactacccattttcataca 129  Q
    ||| ||| | ||||||||||||||||    
T  6956 tttcacaca-tacccattttcataca 6932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 1006 - 935
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||||| |||||| ||||||| ||||| || ||||||| ||| |||||||||||||||||||||||||    
T  1006 caacaacaacaattgatcatgaaacttatcacaaatcatcaataacaatgcataattcaccaattgagcata 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 11916 - 11821
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  11916 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacaatgcataattcaccaattgagcata 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 132458 - 132363
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| |||| |||||||| | |||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  132458 atcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacgatgcataattcaccaattgagcata 132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 88349 - 88409
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| ||||||| ||||| ||||||||||||||   |||||||||||||||||| ||||    
T  88349 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgatcata 88409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 4e-23; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 70830 - 70735
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||| ||| |||| ||||||| ||||| |||||||||||||  |||||||||||||||||||||||||    
T  70830 atcatcaacaacatgactaaacaacaacaacatccaatgatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgagcata 70735  T

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Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 165107 - 164995
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||  |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  165107 cataattcatcaattaagcataatttcataagaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 165008  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  165007 actcaaacttatc 164995  T

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Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 60869 - 60933
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 96  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | ||||||||||||||||    
T  60869 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaatt 60933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 172210 - 172242
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  172210 atgattatgataaagactaacccccttacctta 172242  T

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Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 177913 - 177945
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  177913 atgattatgataaagactaacccccttacctta 177945  T

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Target: scaffold0480 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 5454 - 5359
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  5454 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgagcata 5359  T

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Target: scaffold0240 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 7608 - 7703
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| |||| |||||||| | |||||| ||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||    
T  7608 atcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcataatttatcaacaacaatgcataattcaccaattgagcata 7703  T

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Target: scaffold0173 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 5338 - 5485
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatatt 184  Q
    |||||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| ||   |||||||||| |    
T  5338 aattcatcaattaagcataatttcataacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcaatcaattaacatact 5437  T
Q  185 caaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    ||||| |||| | |  |||  |||||||| ||||||||||||||||||    
T  5438 caaacttatcaccaaaacaagagcacgaaattcaaagattgggttcat 5485  T

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Target: scaffold0044 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 38337 - 38432
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||||||||| |||||||  | |||||| ||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||    
T  38337 atcatcaacaacatgactaaacaacaacaacgtcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcgccaattgagcata 38432  T

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Target: scaffold0008 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 22730 - 22825
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || ||||| ||||| |||||||| | |||||| ||||||| ||||| |||||||||||||  |||||||||||||||||||||||||    
T  22730 atcatcaacaacatgacaaaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgagcata 22825  T

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Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 128127 - 128095
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  128127 atgattatgataaagactaacccccttacctta 128095  T

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Target: scaffold0335 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 5722 - 5580
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    |||||||||  |||| ||||||||||  |||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  5722 cataattcattaattaagcataatttcaaaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 5623  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagatt 224  Q
    | |||||| |||| | |  |||  |||||||| ||||||||||    
T  5622 actcaaacttatcaccaaaacaagagcacgaaattcaaagatt 5580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 254998 - 254900
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    |||||||| | |||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  254998 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 254900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 261604 - 261506
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    |||||||| | |||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  261604 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgagcatattttcaacacatacccattttcataca 261506  T

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Target: scaffold0118 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 34554 - 34442
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  34554 cataattcatcaattaagcataatttcacaactacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 34455  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  34454 actcaaacttatc 34442  T

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Target: scaffold0359 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 11838 - 11740
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatttacaaac-tacccattttcataca 129  Q
    |||||||||| |||||| ||||||| | ||| |||||||||||||| ||||||||||||| ||||||||||| |||  | || ||||||||||||||||    
T  11838 caacaacaacaattgatcatgaaacttttcacaattcatcaacaacaatgcataattcactaattgagcatattttcaacacatacccattttcataca 11740  T

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Target: scaffold0359; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 1380 - 1451
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||| ||||||    
T  1380 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagcata 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 47; Significance: 9e-18; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 61368 - 61218
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  61368 cataagtcatcaattaagcataatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 61269  T
Q  182 attcaaacatatctctaccacataagcacgaatttcaaagattgggttcat 232  Q
    | |||||| |||| | |  |||  ||||||||  | |||||||||||||||    
T  61268 actcaaacttatcaccaaaacaagagcacgaaaattaaagattgggttcat 61218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 48903 - 48935
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  48903 atgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 153956 - 153924
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  153956 atgattatgataataactaacccccttacctta 153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 4346 - 4445
Alignment:
Q  30 atcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt-acaaactacccattttcatac 128  Q
    |||| ||||||| |||||| || |||| ||||| |||||||||||||| |||||||||||||||||||| |||| ||| ||| | |||||||||||||||    
T  4346 atcatcaacaacaattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattgaacatattttcacaca-tacccattttcatac 4444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 11862 - 11970
Alignment:
Q  86 attcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattc 185  Q
    ||||| ||||| ||||||||||   ||||||||||||||| |||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||| ||    
T  11862 attcatcaattaagcataatttcacaactacccattttcaaacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacatactc 11961  T
Q  186 aaacatatc 194  Q
    |||| ||||    
T  11962 aaacttatc 11970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 26372 - 26340
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 49989 - 49877
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||||||| ||||| || |||||||   |||||||||||||||||||  |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  49989 cataattcatcaattaagtataatttcacaactacccattttcatacactatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 49890  T
Q  182 attcaaacatatc 194  Q
    | |||||| ||||    
T  49889 actcaaacttatc 49877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 146659 - 146735
Alignment:
Q  27 aacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||| |||||||| | |||||| ||||||| ||||| |||||||||||||||  |||||||||||||||||||||||    
T  146659 aacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgagcata 146735  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 146906 - 146938
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  146906 atgattatgataaagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 85371 - 85466
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| ||||| |||||||||||||||  |||||||||||||||| ||||||    
T  85371 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattaagcata 85466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 159362 - 159438
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattca-ccaattgagcataattt 107  Q
    |||||||| | |||||| ||||||| ||||| |||||| || ||||   |||||||||| |||||||||||||||||    
T  159362 caacaacatcaattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataattt 159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 253197 - 253102
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| ||||  ||||||||| |||||| ||||||| ||||| |||||| ||||||| | |||| ||||||||||||||||||    
T  253197 atcatcaacaacatgacttaacaaaaacaacaacaattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgagcata 253102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 247398 - 247366
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  247398 atgattatgataaagactaacccccttacctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 1701 - 1754
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactca 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 94 - 147
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactca 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 19881 - 19828
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactca 19828  T

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Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 24185 - 24132
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactca 24132  T

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Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 20493 - 20546
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactca 20546  T

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Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 33700 - 33800
Alignment:
Q  7 catcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataatt 106  Q
    ||||| ||| ||||| ||| | || |||||||| | |||||| ||||||| ||||||||||||||||||||   |||||||||||||||| | |||||||    
T  33700 catcaacaacaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacatagcataattcaccaattaaacataatt 33799  T
Q  107 t 107  Q
    |    
T  33800 t 33800  T

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Target: scaffold1867 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 207 - 278
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||||||||||    
T  207 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 278  T

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Target: scaffold0610 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 784 - 689
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||| ||||||||    
T  784 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcata 689  T

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Target: scaffold0190 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 10000 - 10071
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| |||||| ||||||| | |||||||||||||||||||||||    
T  10000 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgagcata 10071  T

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Target: scaffold0615 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 6357 - 6252
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||| ||||||   ||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  6357 cataagtcatcaattaagcttaatttcacaacaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 6258  T
Q  182 attcaa 187  Q
    | ||||    
T  6257 actcaa 6252  T

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Target: scaffold0310 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 6335 - 6282
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcaccaactattagctca 346  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||| ||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactca 6282  T

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Target: scaffold0310; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 41 - 1
Alignment:
Q  293 tgattatgataaaaactaacccccttaccttaattatcacc 333  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatcacc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 182
Target Start/End: Complemental strand, 17455 - 17355
Alignment:
Q  82 cataattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacat 181  Q
    ||||| ||| ||||| ||||||||||   | | |||||||||||||||| |||||| ||  ||||||||| |||||||||||||| |||  |||||||||    
T  17455 cataagtcatcaattaagcataatttcacagcaacccattttcatacattatgaacatgttatttcatcaccaacaattcatttatcattcaattaacat 17356  T
Q  182 a 182  Q
    |    
T  17355 a 17355  T

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Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 48186 - 48286
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||| || |||| ||| || ||| |||||| ||||||| | ||| |||||||||||||| |  |||||||||||||||||||||| |||    
T  48186 atcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttt 48285  T
Q  108 a 108  Q
    |    
T  48286 a 48286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 61634 - 61734
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcataattt 107  Q
    |||||||| || ||| || |||| ||| || ||| |||||| ||||||| | ||| |||||||||||||| |  |||||||||||||||||||||| |||    
T  61634 atcatcaacaacatggcttaacaacaataataacaattgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttt 61733  T
Q  108 a 108  Q
    |    
T  61734 a 61734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 109670 - 109582
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 96  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| ||||| ||||||||||||||   ||||||||||||||||    
T  109670 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatt 109582  T

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Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 118171 - 118076
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | | |||| ||||||| ||||| ||||||||||||||   |||||||||||||||||| ||||    
T  118171 atcatcaacaacatgacttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgaacata 118076  T

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Target: scaffold0195 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 702 - 631
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||||||   |||||||||||||| ||||||||    
T  702 caacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgagcata 631  T

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Target: scaffold0158 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 25021 - 25092
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||||| ||||||  |||||| ||||| |||||| ||||||| |  ||||||||||||||||||||||    
T  25021 caacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 25092  T

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Target: scaffold0158; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 25274 - 25345
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||||| ||||||  |||||| ||||| |||||| ||||||| |  ||||||||||||||||||||||    
T  25274 caacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgagcata 25345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 21551 - 21646
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | | | || ||||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  21551 atcatcaacaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcata 21646  T

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Target: scaffold0120; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 31250 - 31345
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || ||| |||| | |||||||||||||| ||||| ||||||||||||||   | |||||| ||||||||||||||    
T  31250 atcatcaacaacatgacttagcaacaaaaacatcaattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattgagcata 31345  T

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Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 4980 - 5075
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | |||||| ||||||| ||||| |||||| ||||||| |  ||||||||||||||| ||||||    
T  4980 atcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaattaagcata 5075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 12734 - 12637
Alignment:
Q  85 aattcaccaattgagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 182  Q
    |||||| |||||||||||||||||  || ||  |||||  ||| | ||||||| ||||||||||||||||| |||||| ||| || ||| ||||||||    
T  12734 aattcatcaattgagcataatttatcaattattcatttatatataacatgaacatgcaatttcatcatcaataattcaattatcaacaagttaacata 12637  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 112750 - 112658
Alignment:
Q  11 atcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    ||||| || |||||| |||| ||||||||   |||||| ||||||| ||||| ||||||||||| ||   ||||||||||| |||||||||||    
T  112750 atcaacaacatgacttaacaacaacaacataaattgatcatgaaacttatcacaattcatcaaccacatagcataattcactaattgagcata 112658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 68089 - 67997
Alignment:
Q  85 aattcaccaatt-gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaatt 176  Q
    |||||| ||||| ||||| |||| ||||  |||||||||||| | || |||||| ||||||||||||  |||||||||| ||| || ||||||    
T  68089 aattcaacaattagagcacaattcacaatatacccattttcacatattatgaacatgcaatttcatctacaacaattcaattatcaccaaatt 67997  T

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Target: scaffold0601 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 981 - 902
Alignment:
Q  115 acccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 194  Q
    ||||||||||| | || |||||| ||||||||||||| |||||||||| ||| || |||||| |  || |||||||||||    
T  981 acccattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaattcatttactcaaacatatc 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 9026 - 9121
Alignment:
Q  8 atcatcaaaaatatgactaaacatcaacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| || |||||| | || |||||||| | | ||||  |||||| ||||| || |||||||||||   |||||||||||||||||||||||    
T  9026 atcatcaacaacatgacttagcaacaacaacatcaagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgagcata 9121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 84 - 155
Alignment:
Q  32 caacaacaaccattgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||||| | |||||| ||||||| ||||| ||||||||||| ||   ||||||||||| |||||||||||    
T  84 caacaacatcaattgatcatgaaacttatcacaattcatcaaccacgtagcataattcacgaattgagcata 155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 34535 - 34404
Alignment:
Q  139 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataat 238  Q
    |||||||||  |||||||| |||| ||| |||||| || ||||| ||||||||||| |||| ||   ||||||||||||||  |||  |||||  |||||    
T  34535 tgcaatttccacatcaacagttcagttatcatcaatttcacatactcaaacatatcactacaactagagcacgaatttcaacaattaagttcacaataat 34436  T
Q  239 cacttat-tctcataatcaattatgcatagaa 269  Q
    ||||||| ||  |||| || ||||||||||||    
T  34435 cacttatctcaaataagcacttatgcatagaa 34404  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 20012 - 19881
Alignment:
Q  139 tgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataat 238  Q
    |||||||||  ||||||||||||| ||| |||||| || |||||  |||||||| | |||  |||| ||||||||||||||  |||  |||||  |||||    
T  20012 tgcaatttccacatcaacaattcaattatcatcaatttcacatacccaaacataacactaaaacatgagcacgaatttcaacaattaagttcacaataat 19913  T
Q  239 cacttat-tctcataatcaattatgcatagaa 269  Q
    ||||||| ||  |||| || ||||||||||||    
T  19912 cacttatctcaaataaacacttatgcatagaa 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 6024 - 5990
Alignment:
Q  290 aaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||| ||||||||||||||||||    
T  6024 aaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 57426 - 57392
Alignment:
Q  290 aaatgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||||| ||||||||||||||||||    
T  57426 aaatgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0468 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 11041 - 10992
Alignment:
Q  142 aatttcatcatcaacaattcatttaacatcaaattaacatattcaaacat 191  Q
    ||||||||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  11041 aatttcatcatcaacaactcaatcaacatcaaattcacatactcaaacat 10992  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 7165 - 7112
Alignment:
Q  129 atcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacata 182  Q
    ||||||||| ||||| |||||||||||||||||| ||| || ||| ||||||||    
T  7165 atcatgaacatgcaaattcatcatcaacaattcaattatcaacaagttaacata 7112  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 244920 - 244855
Alignment:
Q  130 tcatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatct 195  Q
    |||||||| | ||||||||||||| | |||||| ||| || ||||||||||||  |||||||||||    
T  244920 tcatgaacatacaatttcatcatccataattcaattatcaacaaattaacatacccaaacatatct 244855  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 272330 - 272362
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  272330 atgattatgataaagactaacccccttacctta 272362  T

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Target: scaffold1500 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 1463 - 1431
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  1463 atgattatgataataactaacccccttacctta 1431  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 1524 - 1492
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  1524 atgattatgataataactaacccccttacctta 1492  T

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Target: scaffold0498 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 9183 - 9215
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  9183 atgattatgataaagactaacccccttacctta 9215  T

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Target: scaffold0383 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 2700 - 2732
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    ||||||||||||| |||||||||||||||||||    
T  2700 atgattatgataataactaacccccttacctta 2732  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  12418 atgattatgataaagactaacccccttacctta 12450  T

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Target: scaffold0266 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 1430 - 1462
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  1430 atgattatgataaagactaacccccttacctta 1462  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  292 atgattatgataaaaactaacccccttacctta 324  Q
    |||||||||||||| ||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 11741 - 11681
Alignment:
Q  43 attgataatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagcata 103  Q
    |||||| |||||||  |||| |||||| ||||||| | |||||||||||||||| ||||||    
T  11741 attgatcatgaaactgatcacaattcaacaacaacaaagcataattcaccaattaagcata 11681  T

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