View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1411_low_21 (Length: 232)

Name: NF1411_low_21
Description: NF1411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1411_low_21
NF1411_low_21
[»] chr8 (35 HSPs)
chr8 (2-221)||(28997998-28998219)
chr8 (1-56)||(10717121-10717176)
chr8 (1-56)||(10718452-10718507)
chr8 (1-54)||(3483635-3483688)
chr8 (1-56)||(1420446-1420501)
chr8 (1-56)||(22534726-22534781)
chr8 (1-56)||(36588222-36588277)
chr8 (1-56)||(45517964-45518019)
chr8 (2-56)||(14197825-14197879)
chr8 (1-55)||(28996835-28996889)
chr8 (1-56)||(22272274-22272329)
chr8 (1-56)||(22533317-22533372)
chr8 (1-55)||(4182623-4182677)
chr8 (1-56)||(4183983-4184038)
chr8 (1-56)||(30124227-30124282)
chr8 (1-56)||(38456734-38456789)
chr8 (1-56)||(38658481-38658536)
chr8 (1-55)||(39440426-39440480)
chr8 (4-56)||(36589394-36589446)
chr8 (2-54)||(38455449-38455501)
chr8 (1-56)||(1376935-1376990)
chr8 (1-56)||(1385559-1385614)
chr8 (1-56)||(22270943-22270998)
chr8 (9-56)||(30123152-30123199)
chr8 (1-56)||(39439924-39439979)
chr8 (1-56)||(41847184-41847239)
chr8 (5-54)||(45516399-45516448)
chr8 (8-56)||(10292816-10292864)
chr8 (1-56)||(3031547-3031602)
chr8 (1-56)||(20984146-20984201)
chr8 (6-53)||(41357375-41357422)
chr8 (1-51)||(34904513-34904563)
chr8 (1-55)||(41354472-41354526)
chr8 (16-53)||(3484806-3484843)
chr8 (4-56)||(6783578-6783630)
[»] chr5 (20 HSPs)
chr5 (1-56)||(3936578-3936633)
chr5 (1-56)||(4565393-4565448)
chr5 (1-56)||(27571133-27571188)
chr5 (1-56)||(3954052-3954107)
chr5 (1-56)||(31540496-31540551)
chr5 (2-56)||(34911833-34911887)
chr5 (1-56)||(3938064-3938119)
chr5 (1-56)||(6894014-6894069)
chr5 (3-54)||(27570058-27570109)
chr5 (3-56)||(15599765-15599818)
chr5 (2-54)||(14809165-14809217)
chr5 (2-54)||(15604063-15604114)
chr5 (1-56)||(31541626-31541681)
chr5 (1-54)||(3205106-3205159)
chr5 (1-54)||(25254135-25254188)
chr5 (1-54)||(25317925-25317978)
chr5 (16-56)||(25252641-25252681)
chr5 (16-56)||(25316426-25316466)
chr5 (8-56)||(35604419-35604467)
chr5 (5-56)||(34910593-34910643)
[»] chr7 (39 HSPs)
chr7 (1-56)||(24195607-24195662)
chr7 (4-55)||(31489942-31489993)
chr7 (1-56)||(31848148-31848203)
chr7 (1-56)||(35212068-35212123)
chr7 (2-56)||(5611512-5611566)
chr7 (3-53)||(38742184-38742234)
chr7 (1-53)||(12385711-12385763)
chr7 (4-56)||(32197916-32197968)
chr7 (1-56)||(13418950-13419005)
chr7 (1-56)||(17066425-17066480)
chr7 (1-56)||(41693645-41693700)
chr7 (1-56)||(41694959-41695014)
chr7 (1-55)||(32196685-32196739)
chr7 (3-56)||(554245-554298)
chr7 (2-55)||(31853549-31853602)
chr7 (4-53)||(32544781-32544830)
chr7 (3-56)||(36748198-36748250)
chr7 (1-53)||(11217075-11217127)
chr7 (1-56)||(12933419-12933474)
chr7 (1-56)||(24197107-24197162)
chr7 (1-56)||(42254958-42255013)
chr7 (6-56)||(39619800-39619850)
chr7 (1-50)||(43869916-43869965)
chr7 (6-53)||(43066004-43066051)
chr7 (2-56)||(36749252-36749306)
chr7 (8-53)||(32543483-32543528)
chr7 (4-56)||(25046247-25046299)
chr7 (25-56)||(12932752-12932783)
chr7 (1-56)||(29198303-29198358)
chr7 (5-56)||(40576766-40576817)
chr7 (1-56)||(44568326-44568381)
chr7 (1-55)||(30512046-30512100)
chr7 (1-54)||(28462632-28462685)
chr7 (1-42)||(42255906-42255947)
chr7 (9-53)||(5610159-5610203)
chr7 (4-56)||(6589021-6589073)
chr7 (4-56)||(9454115-9454167)
chr7 (4-56)||(30513287-30513339)
chr7 (1-53)||(31846989-31847041)
[»] chr4 (43 HSPs)
chr4 (1-56)||(22204055-22204110)
chr4 (1-56)||(42359350-42359405)
chr4 (2-56)||(3880501-3880555)
chr4 (2-56)||(32699319-32699373)
chr4 (1-56)||(33137232-33137287)
chr4 (1-56)||(45618285-45618340)
chr4 (4-56)||(41933818-41933870)
chr4 (5-53)||(41935078-41935126)
chr4 (1-56)||(3879086-3879141)
chr4 (1-56)||(19674414-19674469)
chr4 (1-56)||(19675624-19675679)
chr4 (1-56)||(45619735-45619790)
chr4 (1-56)||(34659706-34659761)
chr4 (1-56)||(42358032-42358087)
chr4 (1-56)||(54121704-54121759)
chr4 (6-56)||(38166495-38166545)
chr4 (6-56)||(44705299-44705349)
chr4 (1-56)||(40198577-40198629)
chr4 (1-53)||(17371849-17371901)
chr4 (4-56)||(29060889-29060941)
chr4 (5-53)||(35054665-35054713)
chr4 (17-56)||(5259171-5259210)
chr4 (2-53)||(16574373-16574424)
chr4 (1-56)||(17281571-17281626)
chr4 (1-56)||(17370073-17370128)
chr4 (1-56)||(55542583-55542638)
chr4 (2-56)||(33134891-33134945)
chr4 (1-56)||(4211561-4211616)
chr4 (1-56)||(12152438-12152493)
chr4 (1-56)||(14487802-14487857)
chr4 (5-56)||(16573378-16573429)
chr4 (1-56)||(22205226-22205281)
chr4 (1-56)||(26412529-26412584)
chr4 (1-56)||(29059713-29059768)
chr4 (9-56)||(32697999-32698046)
chr4 (1-56)||(46292392-46292447)
chr4 (1-55)||(6353583-6353637)
chr4 (2-56)||(17326739-17326793)
chr4 (3-53)||(38167779-38167829)
chr4 (1-51)||(54120759-54120809)
chr4 (5-54)||(16916069-16916118)
chr4 (1-54)||(47359516-47359569)
chr4 (24-56)||(13074093-13074125)
[»] chr3 (52 HSPs)
chr3 (1-56)||(39820608-39820663)
chr3 (1-56)||(52401017-52401072)
chr3 (1-56)||(53121302-53121357)
chr3 (2-56)||(46026076-46026130)
chr3 (1-56)||(20585648-20585703)
chr3 (1-56)||(52403128-52403183)
chr3 (5-56)||(52708625-52708676)
chr3 (1-55)||(20489362-20489416)
chr3 (5-55)||(40476222-40476272)
chr3 (2-56)||(40477379-40477433)
chr3 (1-55)||(45267306-45267360)
chr3 (2-56)||(54437472-54437526)
chr3 (5-56)||(42446526-42446577)
chr3 (1-56)||(45268574-45268629)
chr3 (1-56)||(46104343-46104398)
chr3 (1-56)||(47433813-47433868)
chr3 (1-54)||(20488368-20488421)
chr3 (4-53)||(22508738-22508787)
chr3 (1-53)||(52707539-52707591)
chr3 (1-56)||(4705681-4705736)
chr3 (1-56)||(32635594-32635649)
chr3 (1-56)||(43641143-43641198)
chr3 (1-56)||(46027421-46027476)
chr3 (1-56)||(48033058-48033113)
chr3 (2-56)||(9855178-9855232)
chr3 (1-55)||(32637192-32637246)
chr3 (6-56)||(44507808-44507858)
chr3 (1-55)||(48035736-48035790)
chr3 (10-55)||(15782216-15782261)
chr3 (3-56)||(38505585-38505638)
chr3 (1-54)||(39819314-39819367)
chr3 (4-56)||(977853-977905)
chr3 (8-56)||(20802848-20802896)
chr3 (1-56)||(3416495-3416550)
chr3 (10-53)||(42444040-42444083)
chr3 (2-56)||(41780813-41780867)
chr3 (3-56)||(51004142-51004195)
chr3 (9-53)||(15782721-15782765)
chr3 (4-56)||(35639507-35639559)
chr3 (1-56)||(976780-976835)
chr3 (1-52)||(11914837-11914888)
chr3 (1-56)||(30106165-30106220)
chr3 (6-53)||(37845408-37845455)
chr3 (5-56)||(43734049-43734100)
chr3 (9-56)||(44506582-44506629)
chr3 (6-53)||(50562924-50562971)
chr3 (1-56)||(53122475-53122530)
chr3 (18-56)||(3417813-3417851)
chr3 (25-55)||(14788441-14788471)
chr3 (1-30)||(46106768-46106797)
chr3 (24-56)||(20405191-20405223)
chr3 (5-53)||(50563819-50563867)
[»] chr2 (34 HSPs)
chr2 (1-56)||(1777469-1777524)
chr2 (1-56)||(2412432-2412487)
chr2 (1-56)||(25977870-25977925)
chr2 (1-56)||(25979255-25979310)
chr2 (1-53)||(36837782-36837834)
chr2 (1-56)||(23861752-23861807)
chr2 (4-56)||(1778797-1778849)
chr2 (1-56)||(8809596-8809652)
chr2 (2-54)||(23863055-23863107)
chr2 (1-56)||(25283276-25283331)
chr2 (4-56)||(11087049-11087101)
chr2 (1-56)||(11088684-11088739)
chr2 (2-53)||(12067000-12067051)
chr2 (1-56)||(19604923-19604978)
chr2 (10-53)||(24754171-24754214)
chr2 (1-56)||(29794321-29794375)
chr2 (1-56)||(30215816-30215871)
chr2 (1-56)||(30843644-30843699)
chr2 (5-56)||(30844556-30844607)
chr2 (2-53)||(43824166-43824217)
chr2 (2-52)||(588543-588593)
chr2 (9-54)||(8810715-8810760)
chr2 (6-55)||(25282408-25282457)
chr2 (1-53)||(4040220-4040272)
chr2 (4-56)||(19603738-19603790)
chr2 (1-56)||(20245309-20245365)
chr2 (5-56)||(1590907-1590958)
chr2 (1-56)||(2411262-2411317)
chr2 (1-56)||(10671630-10671685)
chr2 (1-56)||(18113089-18113144)
chr2 (26-56)||(15531029-15531059)
chr2 (1-54)||(1137983-1138036)
chr2 (8-56)||(3924877-3924925)
chr2 (20-56)||(12068368-12068404)
[»] chr1 (42 HSPs)
chr1 (1-56)||(9774892-9774947)
chr1 (1-56)||(27262908-27262963)
chr1 (1-56)||(27264220-27264275)
chr1 (1-56)||(46075054-46075109)
chr1 (2-56)||(24609919-24609973)
chr1 (1-56)||(23469973-23470028)
chr1 (1-56)||(35721101-35721156)
chr1 (1-56)||(37395633-37395688)
chr1 (1-56)||(47038866-47038921)
chr1 (1-53)||(9774040-9774092)
chr1 (1-56)||(11711258-11711312)
chr1 (1-56)||(20722472-20722527)
chr1 (1-56)||(20723692-20723747)
chr1 (1-56)||(24427373-24427428)
chr1 (1-56)||(26863860-26863915)
chr1 (1-56)||(39163028-39163083)
chr1 (1-56)||(48588965-48589020)
chr1 (1-56)||(48594052-48594107)
chr1 (1-56)||(48598663-48598718)
chr1 (7-56)||(45979506-45979555)
chr1 (4-56)||(17977566-17977618)
chr1 (4-56)||(34934754-34934806)
chr1 (4-56)||(35911895-35911947)
chr1 (4-56)||(37396847-37396899)
chr1 (4-56)||(50164403-50164455)
chr1 (1-56)||(11710553-11710608)
chr1 (1-56)||(17976761-17976816)
chr1 (1-56)||(24611121-24611176)
chr1 (5-56)||(35722293-35722344)
chr1 (1-51)||(27816724-27816774)
chr1 (1-54)||(51240121-51240174)
chr1 (8-56)||(2604138-2604186)
chr1 (1-56)||(13074578-13074633)
chr1 (1-56)||(26865188-26865243)
chr1 (1-56)||(27815441-27815496)
chr1 (1-56)||(46073885-46073940)
chr1 (1-56)||(48334136-48334191)
chr1 (1-56)||(10631473-10631528)
chr1 (1-56)||(30724019-30724074)
chr1 (4-56)||(39162823-39162876)
chr1 (4-56)||(13074121-13074173)
chr1 (4-56)||(30722116-30722168)
[»] scaffold0002 (4 HSPs)
scaffold0002 (2-56)||(345902-345956)
scaffold0002 (2-56)||(374335-374389)
scaffold0002 (1-56)||(344937-344992)
scaffold0002 (9-56)||(376381-376428)
[»] scaffold0517 (2 HSPs)
scaffold0517 (1-56)||(11526-11581)
scaffold0517 (4-56)||(10315-10367)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-56)||(435-490)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-56)||(30911-30966)
scaffold0106 (1-56)||(29729-29784)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-56)||(120989-121044)
scaffold0001 (1-56)||(119593-119648)
[»] chr6 (27 HSPs)
chr6 (1-56)||(17517313-17517368)
chr6 (1-56)||(18810532-18810587)
chr6 (1-56)||(21165246-21165301)
chr6 (1-56)||(34998145-34998200)
chr6 (1-54)||(17516164-17516217)
chr6 (1-56)||(16995451-16995506)
chr6 (1-56)||(20897501-20897556)
chr6 (1-56)||(21953206-21953261)
chr6 (1-56)||(29291359-29291414)
chr6 (2-56)||(3276367-3276421)
chr6 (1-53)||(1171655-1171707)
chr6 (9-56)||(1972400-1972447)
chr6 (1-56)||(1974156-1974211)
chr6 (1-56)||(17000281-17000336)
chr6 (2-53)||(20391217-20391268)
chr6 (9-54)||(20895960-20896005)
chr6 (5-54)||(30253547-30253596)
chr6 (1-53)||(3279503-3279555)
chr6 (1-56)||(20393272-20393327)
chr6 (1-56)||(26421847-26421902)
chr6 (1-56)||(34995114-34995169)
chr6 (8-54)||(25439650-25439696)
chr6 (1-44)||(26419525-26419568)
chr6 (1-56)||(31198615-31198670)
chr6 (1-54)||(13617531-13617584)
chr6 (1-54)||(25440677-25440730)
chr6 (24-56)||(15442937-15442969)
[»] scaffold0562 (1 HSPs)
scaffold0562 (1-56)||(9922-9977)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-56)||(202579-202632)
[»] scaffold0765 (1 HSPs)
scaffold0765 (2-53)||(1863-1914)
[»] scaffold0516 (1 HSPs)
scaffold0516 (2-56)||(1140-1194)
[»] scaffold0095 (1 HSPs)
scaffold0095 (1-55)||(42759-42813)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-52)||(6588-6639)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-56)||(16724-16779)


Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 28997998 - 28998219
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccnnnnnnnnn--tcactctattatgtagatgatgaattgatcatca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||    
T  28997998 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagccaaaaaaaaaaatcactctattatgtagatgatgaattgatcatca 28998097  T
Q  100 agattttcattcaagtctctttaaattcaatcgtcatttcaattcatgtccttctattttatagtgaatcatctagcaaactatttttagccaattattt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28998098 agattttcattcaagtctctttaaattcaatcgtcatttcaattcatgtccttctattttatagtgaatcatctagcaaactatttttagccaattattt 28998197  T
Q  200 taaaagtgtctaccacttgatt 221  Q
    ||||||||||||||||||||||    
T  28998198 taaaagtgtctaccacttgatt 28998219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10717176 - 10717121
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10717176 cagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 10717121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10718452 - 10718507
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10718452 cagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 10718507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3483688 - 3483635
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3483688 cagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1420446 - 1420501
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1420446 cagggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttagcc 1420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22534726 - 22534781
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  22534726 cagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagcc 22534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36588277 - 36588222
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  36588277 cagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttagcc 36588222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45517964 - 45518019
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  45517964 cagggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttagcc 45518019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 14197879 - 14197825
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  14197879 agggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttagcc 14197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28996889 - 28996835
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  28996889 cagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 28996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22272274 - 22272329
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  22272274 cagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttagcc 22272329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22533372 - 22533317
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  22533372 cagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttagcc 22533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4182677 - 4182623
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  4182677 cagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttagc 4182623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4183983 - 4184038
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||    
T  4183983 cagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttagcc 4184038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30124227 - 30124282
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||    
T  30124227 cagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttagcc 30124282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38456734 - 38456789
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||    
T  38456734 cagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttagcc 38456789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38658536 - 38658481
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| |||||||||||||| |||||| || ||||||||||||    
T  38658536 cagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttagcc 38658481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39440426 - 39440480
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||    
T  39440426 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 39440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 36589394 - 36589446
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| |||||||||||||||||||| || |||| ||||||||||||    
T  36589394 ggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttagcc 36589446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 38455501 - 38455449
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||||||||| |||| || ||||||||||| ||||||||||||||||||||    
T  38455501 agggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttag 38455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1376990 - 1376935
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||| | |||||||||||||||||||||| ||||||| ||||    
T  1376990 cagggaccaaaatccaaattggctatatttgcagggaccaaaatcatatttaagcc 1376935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1385559 - 1385614
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||| | |||||||||||||||||||||| ||||||| ||||    
T  1385559 cagggaccaaaatccaaattggctatatttgcagggaccaaaaccatatttaagcc 1385614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22270998 - 22270943
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||| ||||| |||||||||||||||||| ||||| ||||||||||||    
T  22270998 cagggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttagcc 22270943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 30123199 - 30123152
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||    
T  30123199 aaaacccaaattcgctatatttgtatggaccaaaaacatattttagcc 30123152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39439979 - 39439924
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||| ||||||| |||||| || ||||||||||||||||||| ||||||||||||    
T  39439979 cagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttagcc 39439924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41847184 - 41847239
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||| ||||||||||||    
T  41847184 cagggaccaaaactcaaattcgctatatttgcagagactaaaagcatattttagcc 41847239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 45516448 - 45516399
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||||||||||| ||||||||||| || |||| |||||||||||||||    
T  45516448 gaccaaaacccaaattcgctatatttacatggactaaaaacatattttag 45516399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 10292864 - 10292816
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||||||||    
T  10292864 caaaacgcaaattcgctatatttgaagggaccaaaatcatattttagcc 10292816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3031547 - 3031602
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| |||   || |||||| |||||||||||||||||||||||||    
T  3031547 cagggaccaaaacctaaatgagccatatttacagggaccaaaaacatattttagcc 3031602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20984201 - 20984146
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  || ||||||||||||||||||| ||||||||||||    
T  20984201 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 20984146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 41357375 - 41357422
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||||| | ||||||||  |||||||||||||||||||    
T  41357375 accaaaacccaaactcaccatatttgcgaggaccaaaaacatatttta 41357422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34904513 - 34904563
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattt 51  Q
    |||| ||||||||||||| |||||||||||| |||||| |||| |||||||    
T  34904513 caggaaccaaaacccaaattcgctatatttgaagggactaaaatcatattt 34904563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41354526 - 41354472
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||| |||||||  ||||||||||||||||  | |||||||||||||||||||||    
T  41354526 caggaaccaaaattcaaactcgctatatttataaggaccaaaaacatattttagc 41354472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 3484806 - 3484843
Alignment:
Q  16 aaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  3484806 aaactcgctatatttgcaggaaccaaaagcatatttta 3484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 6783630 - 6783578
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||  |||| || | |||||||||| |||||||||||||||||||||    
T  6783630 ggaccaaaattcaaattcaccatatttgcagtgaccaaaaacatattttagcc 6783578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3936633 - 3936578
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3936633 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 3936578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4565448 - 4565393
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  4565448 cagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttagcc 4565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27571133 - 27571188
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27571133 cagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcc 27571188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3954107 - 3954052
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  3954107 cagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttagcc 3954052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31540551 - 31540496
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  31540551 caggtaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcc 31540496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 34911833 - 34911887
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  34911833 agggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttagcc 34911887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3938064 - 3938119
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||    
T  3938064 cagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttagcc 3938119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6894014 - 6894069
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||    
T  6894014 cagggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttagcc 6894069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 27570109 - 27570058
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  27570109 gggaacaaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 15599818 - 15599765
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||    
T  15599818 gggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttagcc 15599765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 14809217 - 14809165
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||    
T  14809217 agggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 15604063 - 15604114
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  15604063 agggaccaaaacccaaactcgccatatttgca-ggaccaaaaacacattttag 15604114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31541626 - 31541681
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||| ||| |||||||||||||| ||||||||||||||||||    
T  31541626 cagggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttagcc 31541681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3205106 - 3205159
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||||||||||||||||||   ||||||||||||| ||||| ||||||||||    
T  3205106 cagggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttag 3205159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25254135 - 25254188
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||| |||||| |||||||  |||||||||||||||||||| ||||||||||    
T  25254135 cagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25317925 - 25317978
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||| |||||| |||||||  |||||||||||||||||||| ||||||||||    
T  25317925 cagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 25252681 - 25252641
Alignment:
Q  16 aaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  25252681 aaactcgctatatttgcagagatcaaaaacatattttagcc 25252641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 25316466 - 25316426
Alignment:
Q  16 aaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  25316466 aaactcgctatatttgcagagatcaaaaacatattttagcc 25316426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 35604467 - 35604419
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||||| |||||||||||  ||||||||||||||||||||    
T  35604467 caaaactcaaactcgttatatttgcagaaaccaaaaacatattttagcc 35604419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 34910643 - 34910593
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| |||||| ||||||||||||||||  |||||||||||||||||    
T  34910643 gaccaaaactcaaacttgctatatttgcaggga-taaaaacatattttagcc 34910593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24195662 - 24195607
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24195662 cagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 24195607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 31489942 - 31489993
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31489942 ggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttagc 31489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31848148 - 31848203
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  31848148 cagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttagcc 31848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35212123 - 35212068
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35212123 cagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagcc 35212068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 5611512 - 5611566
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5611512 agggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcc 5611566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 38742234 - 38742184
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38742234 gggaccaaaacccaaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12385711 - 12385763
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  12385711 cagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 32197916 - 32197968
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32197916 ggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttagcc 32197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13419005 - 13418950
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  13419005 cagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttagcc 13418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17066480 - 17066425
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  17066480 cagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttagcc 17066425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41693700 - 41693645
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  41693700 cagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcc 41693645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41694959 - 41695014
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  41694959 cagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttagcc 41695014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32196739 - 32196685
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  32196739 cagggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttagc 32196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 554298 - 554245
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttagcc 554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 31853602 - 31853549
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  31853602 agggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttagc 31853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 32544781 - 32544830
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  32544781 ggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 36748250 - 36748198
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  36748250 gggaccaaaacccaaactctc-atatttgcagggaccaaaaacatattttagcc 36748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11217075 - 11217127
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  11217075 cagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12933474 - 12933419
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||    
T  12933474 cagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagcc 12933419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24197107 - 24197162
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  24197107 caggaaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 24197162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42255013 - 42254958
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  42255013 cagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagcc 42254958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 39619800 - 39619850
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttagcc 39619850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43869916 - 43869965
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatt 50  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  43869916 cagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 43066051 - 43066004
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||    
T  43066051 accaaaactcaaactcgctatatttgcagggataaaaaacatatttta 43066004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 36749252 - 36749306
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||||||  |||||||||  |||||||||||||||||||||    
T  36749252 agggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttagcc 36749306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 32543528 - 32543483
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||    
T  32543528 caaaacccaaacttgctatatttgtagggaccaaaagcatatttta 32543483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 25046247 - 25046299
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| | |||||||| ||||||||| ||||||||| ||||||||||||    
T  25046247 ggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttagcc 25046299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 12932752 - 12932783
Alignment:
Q  25 atatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||    
T  12932752 atatttgcagggaccaaaaacatattttagcc 12932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29198358 - 29198303
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  29198358 cagggactaaaaccaaaacgagatatatttgcagggaccaaaaccatattttagcc 29198303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 40576817 - 40576766
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||| ||||| |||  ||||||||||||||||||| ||||||||||||    
T  40576817 gaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttagcc 40576766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44568381 - 44568326
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  44568381 cagggactaaaaccaaaacgagttatatttgcagggaccaaaaccatattttagcc 44568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30512100 - 30512046
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||| |||||||| |||| |||||||||||||| ||| |||||| ||||||||||    
T  30512100 caggtaccaaaactcaaattcgctatatttgcaaggaacaaaaatatattttagc 30512046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28462632 - 28462685
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||| ||||||||||| |||  |||||||||| |||||||| ||||||||||    
T  28462632 cagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttag 28462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42255906 - 42255947
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaa 42  Q
    ||||||||||||| ||||||||  ||||||||||||||||||    
T  42255906 cagggaccaaaactcaaactcgtcatatttgcagggaccaaa 42255947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 5610203 - 5610159
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||| ||| |||||||||||||| ||||| |||||||||    
T  5610203 aaaacccaaattcgttatatttgcagggatcaaaagcatatttta 5610159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 6589073 - 6589021
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  6589073 ggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcc 6589021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 9454167 - 9454115
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||| ||||| ||||||||||   ||| ||||||||||||    
T  9454167 ggaccaaaacccaaacttgctatgtttgcagggatgcaaagcatattttagcc 9454115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30513287 - 30513339
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| ||||||||   ||||||||| ||||||||| ||||||||||||    
T  30513287 ggaccaaaatccaaactcatcatatttgcaaggaccaaaatcatattttagcc 30513339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31847041 - 31846989
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||| ||||||| ||||| | | |||||||||||||||||||| |||||||||    
T  31847041 caggaaccaaaatccaaattagatatatttgcagggaccaaaagcatatttta 31846989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22204110 - 22204055
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22204110 cagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 22204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42359350 - 42359405
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42359350 cagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 42359405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 3880501 - 3880555
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3880501 agggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttagcc 3880555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 32699319 - 32699373
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttagcc 32699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33137232 - 33137287
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33137232 cagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcc 33137287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45618340 - 45618285
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  45618340 cagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattagcc 45618285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 41933870 - 41933818
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41933870 ggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttagcc 41933818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 41935078 - 41935126
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3879141 - 3879086
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  3879141 cagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcc 3879086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19674469 - 19674414
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  19674469 cagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttagcc 19674414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19675624 - 19675679
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  19675624 cagggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 19675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45619735 - 45619790
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  45619735 cagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttagcc 45619790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34659761 - 34659706
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  34659761 cagggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttagcc 34659706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42358087 - 42358032
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  42358087 cagggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttagcc 42358032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54121704 - 54121759
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||  |||||||||||| ||||| ||||||||||||    
T  54121704 cagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttagcc 54121759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 38166545 - 38166495
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  38166545 accaaaatccaaactcgctatatttgcagggattaaaaacatattttagcc 38166495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 44705349 - 44705299
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  44705349 accaaaacccaaattcactatatttgcagagaccaaaaacatattttagcc 44705299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40198629 - 40198577
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||   |||| ||||||||||||    
T  40198629 cagggaccaaaacccaaactcgctatatttgcaggg---aaaagcatattttagcc 40198577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17371849 - 17371901
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| |||||||||    
T  17371849 cagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 29060889 - 29060941
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||  |||||||||||||||||||||||  |||||||||||||||||    
T  29060889 ggaccaaaattcaaactcgctatatttgcagggattaaaaacatattttagcc 29060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 35054713 - 35054665
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  35054713 gaccaaaacccaaattcgctatatttgcagggactaaaatcatatttta 35054665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 5259171 - 5259210
Alignment:
Q  17 aactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttagcc 5259210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 16574373 - 16574424
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||  ||| ||||||||||||||||||| ||||||||||||||    
T  16574373 agggaccaaaacttaaattcgctatatttgcagggactaaaaacatatttta 16574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17281626 - 17281571
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| || |||||||||    
T  17281626 cagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcc 17281571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17370128 - 17370073
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| || |||||||||    
T  17370128 cagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcc 17370073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 55542583 - 55542638
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| |||||||  |||||||||||||||| |||||||| |||||||||    
T  55542583 cagggaccaaatcccaaacatgctatatttgcagggatcaaaaacagattttagcc 55542638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 33134945 - 33134891
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| | |||||||||  ||||||||||||| ||||||||||||||||||    
T  33134945 agggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttagcc 33134891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4211616 - 4211561
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  4211616 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcc 4211561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12152438 - 12152493
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  12152438 cagggaccaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcc 12152493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14487857 - 14487802
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  14487857 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcc 14487802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 16573429 - 16573378
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| |||| ||||||| || |||||||| ||||||||||||    
T  16573429 gaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttagcc 16573378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22205226 - 22205281
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||  | |||| |||||||||||||||| |||| ||||||||||||    
T  22205226 cagggaccaaaacttacactctctatatttgcagggactaaaagcatattttagcc 22205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26412529 - 26412584
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  || ||||||||||||||||||| ||||||||||||    
T  26412529 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 26412584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29059768 - 29059713
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||  ||| |||| ||| ||||||||||||||| |||||||||||||||||    
T  29059768 cagggaccggaactcaaattcgttatatttgcagggacgaaaaacatattttagcc 29059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 32698046 - 32697999
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  32698046 aaaacctaaattcgctatatttgcagggatcaaaatcatattttagcc 32697999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46292447 - 46292392
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  46292447 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcc 46292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6353583 - 6353637
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| |||||||||||    
T  6353583 cagggactaaaaccaaaacgaggtatatttgcagggaccaaaaccatattttagc 6353637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 17326739 - 17326793
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||    
T  17326739 agggaccaaaacccaaatgccctatatttggagggaccaaaaccatatttaagcc 17326793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 38167779 - 38167829
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||| |||||||||| ||| |||||||| |||||||||||| ||||||||    
T  38167779 gggactaaaacccaaattcgttatatttgtagggaccaaaaatatatttta 38167829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 54120809 - 54120759
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattt 51  Q
    |||| |||||||| ||||||||||||||||| ||  |||||||||||||||    
T  54120809 caggaaccaaaactcaaactcgctatatttgaagaaaccaaaaacatattt 54120759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 16916118 - 16916069
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||| ||||||| | |||||||||||||||||||  |||||||||    
T  16916118 gaccaaaactcaaactcaccatatttgcagggaccaaaagtatattttag 16916069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47359569 - 47359516
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||| ||||| |||| |||||||||||||| | || |||||||||||||||    
T  47359569 cagggactaaaactcaaattcgctatatttgcaagaacgaaaaacatattttag 47359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 13074093 - 13074125
Alignment:
Q  24 tatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||| ||||||||||||    
T  13074093 tatatttgcagggaccaaaaccatattttagcc 13074125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39820608 - 39820663
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39820608 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttagcc 39820663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52401072 - 52401017
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52401072 cagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 52401017  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 53121357 - 53121302
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53121357 cagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 53121302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 46026130 - 46026076
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46026130 agggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 46026076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20585648 - 20585703
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  20585648 cagggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttagcc 20585703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52403128 - 52403183
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  52403128 cagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcc 52403183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 52708625 - 52708676
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52708625 gaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 52708676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20489362 - 20489416
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20489362 cagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 40476272 - 40476222
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 40477379 - 40477433
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  40477379 agggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttagcc 40477433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45267360 - 45267306
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  45267360 cagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttagc 45267306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 54437472 - 54437526
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  54437472 agggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcc 54437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 42446577 - 42446526
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcc 42446526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45268574 - 45268629
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  45268574 cagggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttagcc 45268629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46104398 - 46104343
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  46104398 cagggacaaaaactcaaactcgctatatttgcagggaccaaaatcatattttagcc 46104343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47433813 - 47433868
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  47433813 cagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttagcc 47433868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20488421 - 20488368
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  20488421 cagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttag 20488368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 22508787 - 22508738
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  22508787 ggaccaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 52707591 - 52707539
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  52707591 cagggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4705736 - 4705681
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| |||||||| ||||||||||||| ||||| ||||||||||||    
T  4705736 cagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagcc 4705681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32635649 - 32635594
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||||||||| || |||| ||||| |||||||||||    
T  32635649 cagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttagcc 32635594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43641198 - 43641143
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||    
T  43641198 cagggaccataatccaaactcgctatatttgcagggactaaaagcatattttagcc 43641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46027421 - 46027476
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||  |||||||||||||||||||||||||||||  |||||||||||    
T  46027421 cagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttagcc 46027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48033113 - 48033058
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||    
T  48033113 cagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttagcc 48033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 9855232 - 9855178
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||    
T  9855232 agggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagcc 9855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32637192 - 32637246
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||| |||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  32637192 caggaaccaaaacccaaactcgctacatttacagggaccaaaagcatattttagc 32637246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 44507808 - 44507858
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  44507808 accaaaattcaaactcgctatatttgcagggaccaaaatcatattttagcc 44507858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48035736 - 48035790
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||||||||||| |||||||||  ||||||||||||| |||||||||||||||||    
T  48035736 cagggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttagc 48035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 15782261 - 15782216
Alignment:
Q  10 aaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  15782261 aaactcaaactcgctatatttgcagggaccaaaaatatattttagc 15782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 38505585 - 38505638
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||    
T  38505585 gggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttagcc 38505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39819367 - 39819314
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  39819367 cagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 977853 - 977905
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  977853 ggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatatttcagcc 977905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 20802896 - 20802848
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||||    
T  20802896 caaaacccaaactcgctatatttgtagggactagaaacatattttagcc 20802848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3416550 - 3416495
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||||| ||||||||| |||||| ||||| ||||||||||||    
T  3416550 cagggaccaaaaaccaaacttgctatatttacagggatcaaaatcatattttagcc 3416495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 42444083 - 42444040
Alignment:
Q  10 aaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  42444083 aaacccaaacttgccatatttgcagggaccaaaaacatatttta 42444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 41780813 - 41780867
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||| |||||||||  ||||| ||||||||||||||||||    
T  41780813 agggaccgaaacccaaacttgctatatttttagggatcaaaaacatattttagcc 41780867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 51004195 - 51004142
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||| |||| |||||| ||||| | |||||||||||||||||    
T  51004195 gggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttagcc 51004142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 15782721 - 15782765
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||    
T  15782721 aaaactcaaattcgctatatttgtagggaccaaaaacatatttta 15782765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35639559 - 35639507
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| |||||| ||||||||| || ||||||||| ||||||||||||    
T  35639559 ggaccaaaactcaaacttgctatattttcaaggaccaaaagcatattttagcc 35639507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 976835 - 976780
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||  ||| |||||||||||||||||| ||||| ||||||||||||    
T  976835 cagggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttagcc 976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11914837 - 11914888
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttt 52  Q
    |||| ||||||||||||| ||||||||||||||||||| |||| || |||||    
T  11914837 caggcaccaaaacccaaattcgctatatttgcagggactaaaagcacatttt 11914888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30106165 - 30106220
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  30106165 cagggactaaaaccaaaacgaggtatatttgcagggaccaaaaccatattttagcc 30106220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 37845455 - 37845408
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||  ||||||| |||||||||||| ||||||||||||||||||    
T  37845455 accaaaatacaaactcactatatttgcagagaccaaaaacatatttta 37845408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 43734049 - 43734100
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||| |||||||||||| | ||||||  ||||||||||||    
T  43734049 gaccaaaacccaaacttgctatatttgcaagaaccaaacgcatattttagcc 43734100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 44506629 - 44506582
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| ||||||| ||||||||||||||| |||| ||||||||||||    
T  44506629 aaaaccaaaactcgttatatttgcagggactaaaaccatattttagcc 44506582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 50562971 - 50562924
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  50562971 accaaaacctaaacttactatatttgtagggaccaaaaacatatttta 50562924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53122475 - 53122530
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||  | |||| |||||||||||||||| |||| ||||||||||||    
T  53122475 cagggaccaaaacttacactctctatatttgcagggactaaaagcatattttagcc 53122530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 3417813 - 3417851
Alignment:
Q  18 actcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  3417813 actcgccatatttacagggaccaaaaacatattttagcc 3417851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 14788471 - 14788441
Alignment:
Q  25 atatttgcagggaccaaaaacatattttagc 55  Q
    |||||||||||||||||||||||||||||||    
T  14788471 atatttgcagggaccaaaaacatattttagc 14788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 46106768 - 46106797
Alignment:
Q  1 cagggaccaaaacccaaactcgctatattt 30  Q
    ||||||||||||||||||||||||||||||    
T  46106768 cagggaccaaaacccaaactcgctatattt 46106797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 20405191 - 20405223
Alignment:
Q  24 tatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||| ||||||||||||    
T  20405191 tatatttgcagggaccaaaaccatattttagcc 20405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 50563819 - 50563867
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||| ||||||||| ||||||| ||| ||| ||||||||||||||    
T  50563819 gaccaaaatccaaactcgttatattttcagagactaaaaacatatttta 50563867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1777524 - 1777469
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1777524 cagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagcc 1777469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2412432 - 2412487
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2412432 cagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 2412487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25977925 - 25977870
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25977925 cagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttagcc 25977870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25979255 - 25979310
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25979255 cagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcc 25979310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36837782 - 36837834
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  36837782 cagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23861807 - 23861752
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  23861807 cagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagcc 23861752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 1778797 - 1778849
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  1778797 ggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttagcc 1778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8809652 - 8809596
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgc-agggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  8809652 cagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagcc 8809596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 23863055 - 23863107
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  23863055 agggatcaaaacccaaactcgccatatttgcagagaccaaaaacatattttag 23863107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25283276 - 25283331
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  25283276 cagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttagcc 25283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 11087101 - 11087049
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  11087101 ggaccaaaagccaaactcgctatatttgcagggattaaaatcatattttagcc 11087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11088684 - 11088739
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| |||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  11088684 caggaaccaaaactcaaattcgctatatttgcatggacgaaaaacatattttagcc 11088739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 12067051 - 12067000
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||| |||| ||| |||||||| |||||||||||||||||||||    
T  12067051 agggaccaaaactcaaattcgttatatttgtagggaccaaaaacatatttta 12067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19604923 - 19604978
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||   || |||||| |||||||||||||||||||||||||    
T  19604923 cagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttagcc 19604978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 24754171 - 24754214
Alignment:
Q  10 aaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||| |||| |||||||||||||||||||||||||||||    
T  24754171 aaacccaaattcgccatatttgcagggaccaaaaacatatttta 24754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29794321 - 29794375
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  29794321 caggaaccaaaactcaaattcgctatatttgcagggacc-aaaacatattttagcc 29794375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30215816 - 30215871
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| |||| || |||||||||||||||||||| ||||||||||||    
T  30215816 cagggactaaaaccaaaacgcgatatatttgcagggaccaaaaccatattttagcc 30215871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30843699 - 30843644
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||    
T  30843699 cagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttagcc 30843644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 30844556 - 30844607
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| |||||| |||||| |||||||||| ||||||||||||||||||||||    
T  30844556 gaccgaaacccgaactcgttatatttgcaaggaccaaaaacatattttagcc 30844607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 43824217 - 43824166
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||| |||| | ||||||||||||||||| ||||||||||||||    
T  43824217 agggaccaaaactcaaatttgctatatttgcagggacgaaaaacatatttta 43824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 588543 - 588593
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttt 52  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||||||||    
T  588543 agggatcaaaactcaaactcgttatatttgcagggacaaaaaacatatttt 588593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 8810715 - 8810760
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||    
T  8810715 aaaatccaaattcgctatatttgcagagaccaaaaacatattttag 8810760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 25282457 - 25282408
Alignment:
Q  6 accaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    |||||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  25282457 accaaaactcaaactcgacatatttacagggaccaaaaacatattttagc 25282408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4040220 - 4040272
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||| ||||||| ||| || ||||||||||||||||||||| |||||||||    
T  4040220 cagggagcaaaacctaaattctctatatttgcagggaccaaaatcatatttta 4040272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19603790 - 19603738
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||   | |||||||||||||||||||||||||||| ||||    
T  19603790 ggaccaaaacccaaatgagttatatttgcagggaccaaaaacatatttaagcc 19603738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20245309 - 20245365
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaa-catattttagcc 56  Q
    ||||||| |||||||||| |||||||||||||||| | |||||| ||||||||||||    
T  20245309 cagggactaaaacccaaattcgctatatttgcaggaatcaaaaaccatattttagcc 20245365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 1590907 - 1590958
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||| | ||||||| ||||||| || ||||||||||||||||||||||    
T  1590907 gaccaaaatctaaactcgttatattttcaaggaccaaaaacatattttagcc 1590958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2411317 - 2411262
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||  | |||| |||||||||||||||| |||| ||||||||||||    
T  2411317 cagggaccaaaacttacactctctatatttgcagggactaaaagcatattttagcc 2411262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10671685 - 10671630
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  10671685 cagggactaaaaccaaaacgagatatatttgcagggaccaaaaccatattttagcc 10671630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18113144 - 18113089
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||| |  ||||||||||||||||||| ||||||||||||    
T  18113144 cagggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttagcc 18113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 15531059 - 15531029
Alignment:
Q  26 tatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||||||||||    
T  15531059 tatttgcagggaccaaaaacatattttagcc 15531029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1138036 - 1137983
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||    
T  1138036 cagggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttag 1137983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 3924877 - 3924925
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||| |||||||||| ||||||||| ||| ||||| ||||||||||||    
T  3924877 caaaatccaaactcgccatatttgcaaggagcaaaagcatattttagcc 3924925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 12068368 - 12068404
Alignment:
Q  20 tcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  12068368 tcgctatatttgcagggatcaaaagcatattttagcc 12068404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9774892 - 9774947
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9774892 cagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 9774947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27262963 - 27262908
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27262963 cagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttagcc 27262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27264220 - 27264275
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27264220 cagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcc 27264275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46075054 - 46075109
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46075054 cagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcc 46075109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 24609973 - 24609919
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24609973 agggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 24609919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23469973 - 23470028
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23469973 cagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttagcc 23470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35721156 - 35721101
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35721156 cagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcc 35721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37395688 - 37395633
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  37395688 cagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagcc 37395633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47038921 - 47038866
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  47038921 cagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttagcc 47038866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9774092 - 9774040
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  9774092 cagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11711258 - 11711312
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  11711258 cagggaccaaa-cccaaattcgctatatttgcagggaccaaaaacatattttagcc 11711312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20722527 - 20722472
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  20722527 cagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttagcc 20722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20723692 - 20723747
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  20723692 cagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcc 20723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24427373 - 24427428
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  24427373 cagggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttagcc 24427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26863915 - 26863860
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  26863915 cagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttagcc 26863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39163028 - 39163083
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  39163028 cagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttagcc 39163083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48588965 - 48589020
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  48588965 cagggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttagcc 48589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48594052 - 48594107
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  48594052 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttagcc 48594107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48598663 - 48598718
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  48598663 cagggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttagcc 48598718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 45979506 - 45979555
Alignment:
Q  7 ccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcc 45979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 17977566 - 17977618
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  17977566 ggaccaaaacccaaattcgctatatttgcagggaccaaaaccatatttaagcc 17977618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 34934754 - 34934806
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  34934754 ggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttagcc 34934806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 35911895 - 35911947
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  35911895 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 35911947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 37396847 - 37396899
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  37396847 ggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 37396899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 50164455 - 50164403
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  50164455 ggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttagcc 50164403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11710608 - 11710553
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||    
T  11710608 cagggaccaaaacccaacctcgttatatttacagggatcaaaaacatattttagcc 11710553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17976816 - 17976761
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||    
T  17976816 cagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatatttaagcc 17976761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24611121 - 24611176
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||    
T  24611121 cagggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttagcc 24611176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 35722293 - 35722344
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  35722293 gaccaaaatccaaattcgctatatttacagggaccaaaaacatattttagcc 35722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27816724 - 27816774
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattt 51  Q
    |||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  27816724 cagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51240174 - 51240121
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    |||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  51240174 cagggatcaaaatccaaattcgctatatttgcagagaccaaaaacatattttag 51240121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 2604138 - 2604186
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||    
T  2604138 caaaacccaaactccccatatttgcagggactaaaaacatattttagcc 2604186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13074578 - 13074633
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||  ||||||||||| |||||||| |||||||||||    
T  13074578 cagggaccaaaactcaaactcgtcatatttgcaggaaccaaaaatatattttagcc 13074633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26865188 - 26865243
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||| ||||| ||||||||||||||| ||||||||| |||||||||||    
T  26865188 cagggactaaaatccaaattcgctatatttgcagagaccaaaaatatattttagcc 26865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27815496 - 27815441
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| | ||||||||||||||||||| || ||||||| ||||    
T  27815496 cagggaccaaaacccaaattggctatatttgcagggaccagaaccatatttaagcc 27815441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46073940 - 46073885
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  46073940 cagggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttagcc 46073885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48334136 - 48334191
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| |||||||| |||| |||||||||||| ||||||||||| ||||||||||||    
T  48334136 caggaaccaaaactcaaattcgctatatttgtagggaccaaaagcatattttagcc 48334191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10631473 - 10631528
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  || ||||||||||||||||||| ||||||||||||    
T  10631473 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 10631528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30724019 - 30724074
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||| | | ||||||||||||||| |||| ||||||||||||    
T  30724019 cagggaccaaaactcaaatttgttatatttgcagggacgaaaagcatattttagcc 30724074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 39162876 - 39162823
Alignment:
Q  4 ggaccaaaacccaaactcgctat-atttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| |||||||||| || ||||||||||||||||| |||| |||||||    
T  39162876 ggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttagcc 39162823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 13074173 - 13074121
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| |||| ||||||||||||||| |||||| |  |||||||||||    
T  13074173 ggaccaaaactcaaattcgctatatttgcagagaccaagagaatattttagcc 13074121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 30722168 - 30722116
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||| ||||||| |||||||| |||||||  |||| ||||||||||||    
T  30722168 ggaccaaaatccaaacttgctatattcgcagggattaaaagcatattttagcc 30722116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 345902 - 345956
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  345902 agggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcc 345956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 374389 - 374335
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  374389 agggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttagcc 374335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 344992 - 344937
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  344992 cagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatatttgagcc 344937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 376381 - 376428
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11526 - 11581
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11526 cagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagcc 11581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 10367 - 10315
Alignment:
Q  4 ggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  10367 ggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 435 - 490
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  435 cagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30911 - 30966
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  30911 cagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttagcc 30966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29784 - 29729
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||    
T  29784 cagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttagcc 29729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 120989 - 121044
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  120989 cagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttagcc 121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 119648 - 119593
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  119648 cagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 119593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17517313 - 17517368
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  17517313 cagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttagcc 17517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18810587 - 18810532
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  18810587 cagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 18810532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21165301 - 21165246
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  21165301 cagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttagcc 21165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34998145 - 34998200
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  34998145 cagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagcc 34998200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17516217 - 17516164
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17516217 cagggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttag 17516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16995506 - 16995451
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  16995506 cagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagcc 16995451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20897501 - 20897556
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  20897501 cagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttagcc 20897556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21953261 - 21953206
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  21953261 cagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 21953206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29291414 - 29291359
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  29291414 cagggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttagcc 29291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 3276421 - 3276367
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3276421 agggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttagcc 3276367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1171655 - 1171707
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  1171655 cagggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatatttta 1171707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 1972447 - 1972400
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  1972447 aaaacccaaattcgctttatttgcagggaccaaaaacatattttagcc 1972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1974156 - 1974211
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||    
T  1974156 cagggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttagcc 1974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17000281 - 17000336
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||||||||||||||||| ||| |||||||||||||||||  |||||||||||    
T  17000281 cagggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttagcc 17000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 20391268 - 20391217
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  20391268 agggaccaaaacccaaattcactatatttgcagggaccaaaagcatatttta 20391217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 20896005 - 20895960
Alignment:
Q  9 aaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||    
T  20896005 aaaactcaaattcgctatatttgcagggaccaaaaacatattttag 20895960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 30253547 - 30253596
Alignment:
Q  5 gaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  30253547 gaccaaaactcatactcgctgtatttgcagggaccaaaaacatattttag 30253596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3279503 - 3279555
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    |||| |||||||  ||||||||||||||||||||||| |||||||||||||||    
T  3279503 caggaaccaaaattcaaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20393272 - 20393327
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||  ||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  20393272 cagggactgaaacccaaattcgctatatttgcagggatcaaaagcatattttagcc 20393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26421847 - 26421902
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| ||||| |||| ||||||||||||||| |||||||||||| ||||||||    
T  26421847 cagggactaaaactcaaattcgctatatttgcagagaccaaaaacatgttttagcc 26421902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34995169 - 34995114
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||| |||||||| |||| |||||||||||||||||| ||||| ||||||||||||    
T  34995169 caggaaccaaaactcaaattcgctatatttgcagggatcaaaagcatattttagcc 34995114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 25439696 - 25439650
Alignment:
Q  8 caaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  25439696 caaaacccaaaatcgttatatttgcagggactaaaaacatattttag 25439650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26419568 - 26419525
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaa 44  Q
    |||||||||||||||||||| | |||||||| ||||||||||||    
T  26419568 cagggaccaaaacccaaacttgttatatttgtagggaccaaaaa 26419525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31198670 - 31198615
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  || ||||||||||||||||||| ||||||||||||    
T  31198670 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 31198615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13617584 - 13617531
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||| |||||| ||||  || ||||||||||||||||||| ||||||||||    
T  13617584 cagggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttag 13617531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25440677 - 25440730
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 54  Q
    ||||||||||||  ||||||||| ||||||| | |||||||||| |||||||||    
T  25440677 cagggaccaaaattcaaactcgccatatttgtaaggaccaaaaatatattttag 25440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 15442969 - 15442937
Alignment:
Q  24 tatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||||||||||| ||||||||||||    
T  15442969 tatatttgcagggaccaaaaccatattttagcc 15442937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9977 - 9922
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  9977 cagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcc 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 202632 - 202579
Alignment:
Q  3 gggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  202632 gggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 202579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 1914 - 1863
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttta 53  Q
    ||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  1914 agggatcaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 1140 - 1194
Alignment:
Q  2 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    |||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||    
T  1140 agggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttagcc 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42759 - 42813
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagc 55  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||||    
T  42759 cagggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 42813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6588 - 6639
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatatttt 52  Q
    |||| ||||||||||||| ||||||||||||||||||| |||| || |||||    
T  6588 caggcaccaaaacccaaattcgctatatttgcagggactaaaagcacatttt 6639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16779 - 16724
Alignment:
Q  1 cagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 56  Q
    ||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  16779 cagggactaaaaccaaaacgagatatatttgcagggaccaaaatcatattttagcc 16724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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