View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14120_high_5 (Length: 372)
Name: NF14120_high_5
Description: NF14120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14120_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 18 - 363
Target Start/End: Original strand, 32030528 - 32030871
Alignment:
| Q |
18 |
agaagttagattatttgttaatgggtggcatgtagggtgagttgtgtctatgcaggtcatcgtacttggtttgaaaattacaaccatatatcaaatgaca |
117 |
Q |
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| T |
32030528 |
agaagttagattatttgttaatgggtggcatgtagggtgagttgtgtct--gcaggtcatcgtacttggtttggaaattacaaccatatatcaaatgaca |
32030625 |
T |
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| Q |
118 |
tatagagctggtgcattttagaagtggatggtggttgtttggtttcattaaaatctactagaactaaaacgtggtatgtgcagaatgtgtgaagtctttt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32030626 |
tatagagctggtgcattttagaagtggatggtggttgtttggtttcattaaaatctactagaactaaaacgtggtatgtgcagaatgtgtgaattctttt |
32030725 |
T |
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| Q |
218 |
actatagtattttccaaattaattctgctgcatagtttggttgcgtcaattattgattaatggatgccttgatcgggtacaattgtggttcctttggttt |
317 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32030726 |
actatagtattttccaaattaattcttctgcatagtttggttgcgtcaattattgattaatggatgccttgatcgggtacaactgtggttcctttggttt |
32030825 |
T |
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| Q |
318 |
tagggttttgtcatttgtaattgcaactgtggcatttaggtctctg |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32030826 |
tagggttttgtcatttgtaattgcaactgtggcatttaggtgtctg |
32030871 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 18 - 363
Target Start/End: Original strand, 32039575 - 32039918
Alignment:
| Q |
18 |
agaagttagattatttgttaatgggtggcatgtagggtgagttgtgtctatgcaggtcatcgtacttggtttgaaaattacaaccatatatcaaatgaca |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32039575 |
agaagttagattatttgttaatgggtggcatgtagggtgagttgtgtct--gcaggtcatcgtacttggtttggaaattacaaccatatatcaaatgaca |
32039672 |
T |
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| Q |
118 |
tatagagctggtgcattttagaagtggatggtggttgtttggtttcattaaaatctactagaactaaaacgtggtatgtgcagaatgtgtgaagtctttt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32039673 |
tatagagctggtgcattttagaagtggatggtggttgtttggtttcattaaaatctactagaactaaaacgtggtatgtgcagaatgtgtgaattctttt |
32039772 |
T |
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| Q |
218 |
actatagtattttccaaattaattctgctgcatagtttggttgcgtcaattattgattaatggatgccttgatcgggtacaattgtggttcctttggttt |
317 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32039773 |
actatagtattttccaaattaattcttctgcatagtttggttgcgtcaattattgattaatggatgccttgatcgggtacaactgtggttcctttggttt |
32039872 |
T |
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| Q |
318 |
tagggttttgtcatttgtaattgcaactgtggcatttaggtctctg |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32039873 |
tagggttttgtcatttgtaattgcaactgtggcatttaggtgtctg |
32039918 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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