View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14120_high_8 (Length: 314)
Name: NF14120_high_8
Description: NF14120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14120_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 43804637 - 43804932
Alignment:
| Q |
1 |
tttcaacagaagtctttcattaccggcatgaattgagtttagcagaaggggttagactcctacatcgtgttaaactaagatttatatttagttgtgagag |
100 |
Q |
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|||||| ||||||||| ||||||||||||||||||||| |||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |
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| T |
43804637 |
tttcaatagaagtcttccattaccggcatgaattgagtctagcaggagggattagactc-tacatcgtgttgaactaagatttatatttagttgtgagag |
43804735 |
T |
|
| Q |
101 |
ataatcatatttaatgtccaacatgtctcaaataagattacttatggtggaagaattacgtggaaaaccgagtaaaacttccatttttcttcagttgagc |
200 |
Q |
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|||| |||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
43804736 |
ataaccatatttaatattcgacatatctcaaataagattacttatggtggaagaattacgtggaaaaccgagaaaaacttccatttttcttcagttgagc |
43804835 |
T |
|
| Q |
201 |
aaattagtctcaacattggtgttatagatttatagttacgttgccaacgtaacataattaagctgatgtagatcacagttttttacgtggtaagagt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
43804836 |
aaattagtctcaacattggtgttatagatttatagttacgttgctaacgtaacataattaagctgatgtagatcgcagttttttacgtggtaagagt |
43804932 |
T |
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