View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14120_low_16 (Length: 237)
Name: NF14120_low_16
Description: NF14120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14120_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 2627610 - 2627818
Alignment:
| Q |
14 |
cttccctgccaaccaaaccacccctgccatcattcccatccaactcgtgaagacagtatcgttcactctttcagcgatgatccagtcgagcaatcatgtc |
113 |
Q |
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| T |
2627610 |
cttccctgccaaccaaaccacccctgccatcattcccatccaactcgtgaagacagtattgttcactctttcagcgatgatccggtcgagcaatcatgtc |
2627709 |
T |
|
| Q |
114 |
cactcatgacacactgctgcaccacatgaacatacctctgcattactacgcaagacaataatctccctccatctttcttctgcatccttgtgctttacca |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2627710 |
cactcatgacacactgctgcaccacatgaacatacctctgcattactacgcaagacaataatctccctccatctttcttctgcatccttgtgctttacca |
2627809 |
T |
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| Q |
214 |
gtgcctttt |
222 |
Q |
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||||||||| |
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| T |
2627810 |
gtgcctttt |
2627818 |
T |
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