View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14121_low_2 (Length: 781)

Name: NF14121_low_2
Description: NF14121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14121_low_2
NF14121_low_2
[»] chr3 (52 HSPs)
chr3 (14-766)||(23467143-23467898)
chr3 (539-755)||(23400943-23401159)
chr3 (143-320)||(23427143-23427320)
chr3 (120-335)||(23400736-23400951)
chr3 (388-497)||(40845940-40846049)
chr3 (388-497)||(5391453-5391562)
chr3 (388-496)||(21853194-21853302)
chr3 (388-497)||(44994991-44995101)
chr3 (388-496)||(13856096-13856204)
chr3 (389-497)||(32352843-32352951)
chr3 (396-497)||(8950535-8950636)
chr3 (120-303)||(23452689-23452872)
chr3 (388-496)||(20382514-20382624)
chr3 (388-496)||(19649395-19649506)
chr3 (388-497)||(10839403-10839514)
chr3 (120-335)||(23470907-23471122)
chr3 (388-496)||(1781757-1781867)
chr3 (399-496)||(43347370-43347468)
chr3 (120-335)||(23438407-23438622)
chr3 (388-496)||(36539627-36539737)
chr3 (399-492)||(54546904-54546998)
chr3 (388-496)||(3178699-3178808)
chr3 (120-329)||(23350472-23350681)
chr3 (120-329)||(23461797-23462003)
chr3 (401-487)||(22845398-22845484)
chr3 (120-324)||(23403193-23403394)
chr3 (20-89)||(23427050-23427118)
chr3 (143-329)||(23382057-23382240)
chr3 (399-495)||(8926762-8926860)
chr3 (401-473)||(46685819-46685891)
chr3 (545-659)||(23462007-23462121)
chr3 (401-497)||(33103738-33103835)
chr3 (396-486)||(47889731-47889823)
chr3 (404-497)||(48206848-48206943)
chr3 (545-659)||(23382244-23382358)
chr3 (399-497)||(6280393-6280492)
chr3 (562-660)||(36001223-36001321)
chr3 (574-659)||(23350714-23350799)
chr3 (543-659)||(23471118-23471234)
chr3 (399-471)||(51336231-51336303)
chr3 (604-659)||(23438640-23438695)
chr3 (681-756)||(23446172-23446247)
chr3 (675-756)||(23497915-23497996)
chr3 (562-658)||(23403420-23403516)
chr3 (608-660)||(23446045-23446097)
chr3 (562-665)||(23477305-23477408)
chr3 (606-660)||(23434171-23434225)
chr3 (675-751)||(23477466-23477542)
chr3 (401-496)||(791812-791906)
chr3 (432-496)||(36826021-36826087)
chr3 (396-492)||(19644358-19644458)
chr3 (726-755)||(23403623-23403652)
[»] chr8 (18 HSPs)
chr8 (388-497)||(35806790-35806899)
chr8 (388-496)||(22324593-22324701)
chr8 (388-497)||(21525354-21525463)
chr8 (388-497)||(26021391-26021501)
chr8 (396-497)||(33934400-33934501)
chr8 (388-493)||(42013872-42013977)
chr8 (388-497)||(42072424-42072533)
chr8 (389-475)||(24065291-24065377)
chr8 (397-497)||(19334778-19334879)
chr8 (399-475)||(21488084-21488160)
chr8 (388-493)||(16818996-16819105)
chr8 (401-496)||(10112042-10112139)
chr8 (388-441)||(16523158-16523211)
chr8 (399-475)||(43282885-43282962)
chr8 (399-497)||(2271196-2271289)
chr8 (407-475)||(34697431-34697500)
chr8 (388-439)||(16591398-16591449)
chr8 (335-368)||(42014019-42014052)
[»] chr7 (18 HSPs)
chr7 (388-497)||(44164766-44164875)
chr7 (388-496)||(34707113-34707221)
chr7 (388-497)||(10576669-10576778)
chr7 (400-497)||(24320474-24320571)
chr7 (396-497)||(29555970-29556071)
chr7 (396-497)||(32876561-32876662)
chr7 (388-485)||(34259526-34259623)
chr7 (388-497)||(29238166-29238275)
chr7 (388-478)||(29981136-29981226)
chr7 (388-496)||(33057680-33057789)
chr7 (396-496)||(19334591-19334693)
chr7 (396-496)||(17303145-17303248)
chr7 (399-496)||(10334173-10334272)
chr7 (399-470)||(9770682-9770753)
chr7 (390-496)||(26284404-26284510)
chr7 (399-449)||(15017817-15017867)
chr7 (336-378)||(24320400-24320442)
chr7 (401-496)||(41853128-41853226)
[»] chr6 (15 HSPs)
chr6 (388-496)||(9231877-9231985)
chr6 (388-529)||(14309821-14309962)
chr6 (388-497)||(24694674-24694783)
chr6 (388-497)||(13627536-13627645)
chr6 (388-467)||(1727956-1728035)
chr6 (388-497)||(27863694-27863804)
chr6 (399-475)||(34103703-34103779)
chr6 (399-496)||(28750684-28750783)
chr6 (399-491)||(13103152-13103246)
chr6 (444-497)||(11084606-11084659)
chr6 (399-475)||(11212689-11212765)
chr6 (399-496)||(11279536-11279634)
chr6 (399-437)||(24497608-24497646)
chr6 (401-441)||(8412717-8412757)
chr6 (432-493)||(24500767-24500830)
[»] chr5 (29 HSPs)
chr5 (388-497)||(23218481-23218590)
chr5 (388-497)||(37169056-37169165)
chr5 (388-496)||(38397595-38397703)
chr5 (388-497)||(6257433-6257542)
chr5 (396-539)||(39862518-39862660)
chr5 (388-496)||(16618593-16618701)
chr5 (389-493)||(15631613-15631718)
chr5 (388-496)||(10081140-10081250)
chr5 (388-496)||(8456986-8457096)
chr5 (399-497)||(36769108-36769207)
chr5 (390-475)||(9738008-9738094)
chr5 (388-496)||(11856290-11856400)
chr5 (388-496)||(25560350-25560460)
chr5 (399-493)||(614426-614522)
chr5 (399-475)||(6174762-6174840)
chr5 (399-496)||(42119617-42119716)
chr5 (399-472)||(33271304-33271377)
chr5 (399-497)||(27916133-27916234)
chr5 (388-473)||(29491437-29491521)
chr5 (397-475)||(29790251-29790328)
chr5 (402-467)||(10115185-10115251)
chr5 (407-475)||(3341162-3341230)
chr5 (401-449)||(19322058-19322106)
chr5 (336-368)||(23218632-23218664)
chr5 (426-474)||(33188403-33188451)
chr5 (388-470)||(10052523-10052606)
chr5 (334-368)||(16618517-16618551)
chr5 (423-496)||(22903252-22903329)
chr5 (335-368)||(37168981-37169014)
[»] chr4 (30 HSPs)
chr4 (388-497)||(1535767-1535876)
chr4 (388-497)||(49284353-49284462)
chr4 (396-497)||(25954746-25954847)
chr4 (396-493)||(34240993-34241090)
chr4 (388-497)||(52632514-52632623)
chr4 (388-497)||(37801287-37801396)
chr4 (388-493)||(46583564-46583669)
chr4 (388-497)||(36012208-36012317)
chr4 (396-497)||(35018932-35019033)
chr4 (396-496)||(17888581-17888683)
chr4 (430-496)||(16338309-16338375)
chr4 (388-496)||(31377385-31377495)
chr4 (400-496)||(322584-322682)
chr4 (396-470)||(16338244-16338318)
chr4 (388-496)||(54090176-54090285)
chr4 (388-475)||(20818584-20818672)
chr4 (388-497)||(12792254-12792365)
chr4 (399-491)||(9742567-9742661)
chr4 (388-466)||(10094416-10094495)
chr4 (388-496)||(11054448-11054561)
chr4 (401-497)||(50328790-50328888)
chr4 (389-496)||(35322728-35322837)
chr4 (399-497)||(46473988-46474088)
chr4 (388-449)||(47084056-47084117)
chr4 (609-660)||(12898192-12898243)
chr4 (335-378)||(34241118-34241161)
chr4 (399-475)||(19124772-19124849)
chr4 (401-449)||(5780790-5780838)
chr4 (339-378)||(25954875-25954914)
chr4 (335-368)||(16338161-16338194)
[»] chr2 (20 HSPs)
chr2 (388-497)||(14186461-14186570)
chr2 (388-497)||(14942067-14942176)
chr2 (388-497)||(42769781-42769890)
chr2 (388-496)||(29846439-29846547)
chr2 (396-497)||(19181544-19181645)
chr2 (388-497)||(40277311-40277420)
chr2 (389-497)||(1387312-1387421)
chr2 (401-497)||(3597903-3597999)
chr2 (388-496)||(6318481-6318592)
chr2 (388-496)||(3956567-3956677)
chr2 (388-497)||(41674729-41674841)
chr2 (401-472)||(43139766-43139839)
chr2 (399-497)||(14539738-14539838)
chr2 (389-497)||(33009666-33009777)
chr2 (399-496)||(40780050-40780150)
chr2 (399-496)||(28321737-28321836)
chr2 (401-496)||(23685406-23685503)
chr2 (388-475)||(2888058-2888146)
chr2 (401-472)||(25665244-25665316)
chr2 (414-496)||(32486239-32486323)
[»] chr1 (26 HSPs)
chr1 (388-497)||(3346782-3346891)
chr1 (388-497)||(7742802-7742911)
chr1 (388-497)||(49902464-49902573)
chr1 (388-497)||(29149571-29149680)
chr1 (388-497)||(48392429-48392538)
chr1 (388-493)||(5974988-5975093)
chr1 (388-497)||(42517317-42517430)
chr1 (396-497)||(10156047-10156148)
chr1 (388-497)||(47022698-47022807)
chr1 (396-496)||(23908282-23908382)
chr1 (396-493)||(38859849-38859948)
chr1 (399-496)||(10907682-10907781)
chr1 (400-468)||(5558334-5558402)
chr1 (397-497)||(26835332-26835434)
chr1 (388-475)||(30745361-30745449)
chr1 (388-475)||(30766812-30766900)
chr1 (396-496)||(42456566-42456669)
chr1 (407-475)||(30252787-30252856)
chr1 (388-436)||(37189697-37189745)
chr1 (407-497)||(44107430-44107522)
chr1 (399-475)||(45968685-45968761)
chr1 (399-496)||(14796871-14796970)
chr1 (399-496)||(14805745-14805844)
chr1 (401-475)||(13131914-13131988)
chr1 (399-471)||(26511667-26511739)
chr1 (432-474)||(8430508-8430551)
[»] scaffold0201 (2 HSPs)
scaffold0201 (120-329)||(9969-10175)
scaffold0201 (562-659)||(10196-10293)
[»] scaffold0079 (3 HSPs)
scaffold0079 (430-496)||(54485-54551)
scaffold0079 (396-470)||(54542-54616)
scaffold0079 (335-368)||(54666-54699)
[»] scaffold0045 (1 HSPs)
scaffold0045 (388-475)||(34475-34563)
[»] scaffold0086 (1 HSPs)
scaffold0086 (399-449)||(20865-20915)
[»] scaffold0016 (1 HSPs)
scaffold0016 (401-446)||(85547-85592)


Alignment Details
Target: chr3 (Bit Score: 644; Significance: 0; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 644; E-Value: 0
Query Start/End: Original strand, 14 - 766
Target Start/End: Original strand, 23467143 - 23467898
Alignment:
Q  14 agcataggggctctaagactaagaaggagaagatgaaaagaaactagctacaaaattaaaacatgtgttttcattgattaattaaattcctaaagataca 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  23467143 agcattggggctctaagactaagaaggagaagatgaaaagaaactagctacaaaattaaaacatatgttttcattgattaattacattcctaaagataca 23467242  T
Q  114 acacacttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23467243 acacacttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataaatttcactatcttg 23467342  T
Q  214 tctgttgtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23467343 tctgttgtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttca 23467442  T
Q  314 aagataatacagtgaacggcatcaggggcggttctaaggcccggcgatcccgggctccgggccaannnnnnnnngtaaatctctatgaatttcttatata 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||         ||||||| ||||||||||||||||||    
T  23467443 aagataatacagtgaacggcatcaggggcggttctaaggcccggcgacccccggctccgggccaaattttttgtgtaaatccctatgaatttcttatata 23467542  T
Q  414 aacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaannnnnnnnncgcccag 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||    
T  23467543 aacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaaaaaattttccgcccag 23467642  T
Q  514 gctttacaatattcctggcttcgcc---gaacggcatggtggtaaacattaaagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagatt 610  Q
    |||||||||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  23467643 gctttacaatattcctggctccgccactgaacggcatggtggtaaacattaaagccctcagaaagaatgatggaaaatataaaactgcacaaatcagatt 23467742  T
Q  611 ttggaataggaggaataattattgaagcctctattgtctgaaaatcaaacatgcatgcaatggagtcttcagagaaggtttgtaacatgttattaaaaaa 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23467743 ttggaataggaggaataattattgaagcctctattgtctgaaaatcaaacatgcatgcaatggagtcttcagagaaggtttgtaacatgttattaaaaaa 23467842  T
Q  711 tgacggttgaatggagtatgtgtccagataagtgcaattaacggcagggatggtgg 766  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23467843 tgacggttgaatggagtatgtgtccagataactgcaattaacggcagggatggtgg 23467898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 539 - 755
Target Start/End: Original strand, 23400943 - 23401159
Alignment:
Q  539 gaacggcatggtggtaaacattaaagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagc 638  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23400943 gaacggcatggtggtaaacattaaagccctcagaaagaatgatgcaaaatataaaactgcaccaatcagattttggaataggaggaataattattgaagc 23401042  T
Q  639 ctctattgtctgaaaatcaaacatgcatgcaatggagtcttcagagaaggtttgtaacatgttattaaaaaatgacggttgaatggagtatgtgtccaga 738  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23401043 ctctattgtctgaaaatcaaagatgcatgcaatggagtcttcagagaaggtttgtaacatgttattaaaaaatgacggttgaatggagtatgtgtccata 23401142  T
Q  739 taagtgcaattaacggc 755  Q
    |||||||||||||||||    
T  23401143 taagtgcaattaacggc 23401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 143 - 320
Target Start/End: Original strand, 23427143 - 23427320
Alignment:
Q  143 aattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgttgtgaacatgccagcataccagta 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23427143 aattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataactttcactatattgtctgttgtgaacatgccagcataccagta 23427242  T
Q  243 cataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagataa 320  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  23427243 catgatcagaaatgaatgtcccaagataactgtcactactacaacgtctgtcggcttcttttccgttttcaaaaataa 23427320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 120 - 335
Target Start/End: Original strand, 23400736 - 23400951
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    |||||||||| ||||| |||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||    
T  23400736 ttatcccctccgttgaccaccgcaatagtttcttgtgaccttgaagtagaaactgaaatgataagttgcaaaaatcataacttccactatcttgtctgtt 23400835  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    |||||||||| ||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||| |||| |||| |||||||  || ||||||||||||    
T  23400836 gtgaacatgctagcataccaatacatgatcagtaatgaatatcccaagataactgtcactaatacgacgtctgtcagcttcttagccattttcaaagata 23400935  T
Q  320 atacagtgaacggcat 335  Q
    ||||||||||||||||    
T  23400936 atacagtgaacggcat 23400951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 40845940 - 40846049
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40845940 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 40846039  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  40846040 gtgttgcaaa 40846049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 5391562 - 5391453
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5391562 gtaaatccctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 5391463  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  5391462 gtgttgcaaa 5391453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 21853302 - 21853194
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21853302 gtaaatccctatgaatttcttatataaaaccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 21853203  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  21853202 gtgttgcaa 21853194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 44994991 - 44995101
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccct-ataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaa 486  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44994991 gtaaatccctatgaatttcttatataaaccccttataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaa 44995090  T
Q  487 tgtgttgcaaa 497  Q
    |||||||||||    
T  44995091 tgtgttgcaaa 44995101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 13856204 - 13856096
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13856204 gtaaatccctatgaatttcttatataaatccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 13856105  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  13856104 gtgttgcaa 13856096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 32352951 - 32352843
Alignment:
Q  389 taaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatg 488  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32352951 taaatccctatgaatttcttatataaacccctataaattaggcaatttctttacattttttattatttgcttacaatttcttatgtacgccctataaatg 32352852  T
Q  489 tgttgcaaa 497  Q
    |||||||||    
T  32352851 tgttgcaaa 32352843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 8950535 - 8950636
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  8950535 ctatgaatttcttatataaatccctataaattgggcaatttctttacattttttattatttgcttgaaatttcttatgtacgccctataaatatgttgca 8950634  T
Q  496 aa 497  Q
    ||    
T  8950635 aa 8950636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 120 - 303
Target Start/End: Original strand, 23452689 - 23452872
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| || |||||||||| ||||||||| |||| | || || | |||||| ||||    
T  23452689 ttatcccctctgttgaccaccacaattgttccttttgaccttgaagtaggaactgaaatgataggttgcaaaagtcatgacttccagtttcttgtttgtt 23452788  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttt 303  Q
    || | ||| |||||||| || ||||| ||| ||||| ||||||||||||||  ||  |||||||| || | ||||| |||||||    
T  23452789 gtaaccattccagcatatcaatacatgatctgaaattaatgtcccaagatatttgcaactaatacgacatctgtcgacttcttt 23452872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 20382624 - 20382514
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgtacgc-cctataa 485  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||  | |||||||    
T  20382624 gtaaatccctatgaatttcttatataaacccctataaattgggaaatttctttagatttttttattatttgcttgcaatttcttatgtaaactcctataa 20382525  T
Q  486 atgtgttgcaa 496  Q
    ||| |||||||    
T  20382524 atgcgttgcaa 20382514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 19649395 - 19649506
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt--attatttgcttgcaatttcttatgt-acgccctata 484  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||  ||||||||||||||||||||||||| |  |||||||    
T  19649395 gtaaatcgctatgaatttcttatataaacccttataaattggacaatttctttagattttttggattatttgcttgcaatttcttatgtaattccctata 19649494  T
Q  485 aatgtgttgcaa 496  Q
    ||||||||||||    
T  19649495 aatgtgttgcaa 19649506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 10839403 - 10839514
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataa 485  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  | ||||||     
T  10839403 gtaaatttctctgaatttcttatataaacctctataaattgggcaatttctttagattttttgattatttgcttgcaatttcttatgtaaacacctatac 10839502  T
Q  486 atgtgttgcaaa 497  Q
    ||||||||||||    
T  10839503 atgtgttgcaaa 10839514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 120 - 335
Target Start/End: Original strand, 23470907 - 23471122
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    ||||||||||  |||| ||||  |||| ||| ||| ||||||||||||  |||||||||||||||||||||| ||||||| || || | |||||||||||    
T  23470907 ttatcccctcctttgaccaccgtaattcttcattgggaccttgaagtatgaattgaaatgataagttgcaaatatcataacttccattttcttgtctgtt 23471006  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    || | ||||||| |||| || | ||| ||| ||||| |||||||||| |||| ||| |||||| | |||| ||| | |||||||||||  |||||| |||    
T  23471007 gtaaccatgccaacatatcaatgcatgatctgaaattaatgtcccaaaataattgtgactaatgcgacgtctgttgacttcttttccgcgttcaaaaata 23471106  T
Q  320 atacagtgaacggcat 335  Q
    ||||| |||| |||||    
T  23471107 atacaatgaagggcat 23471122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 1781867 - 1781757
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgt-acgccctataa 485  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |  ||||||||    
T  1781867 gtaaatccctctgaatttcttatataaaccccaataaattgggcaatttctttagattttttgattatttgcttgcaatttcgtatgtaaacccctataa 1781768  T
Q  486 atgtgttgcaa 496  Q
    |||||||||||    
T  1781767 atgtgttgcaa 1781757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 43347370 - 43347468
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgccctataaatgtgttgcaa 496  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||| | ||||||||    
T  43347370 tgaatttcttatataaacccctacaaattgggcaatttctttagattttttgattatttgcttgcaatttcttatgtaaaccctataattatgttgcaa 43347468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 120 - 335
Target Start/End: Original strand, 23438407 - 23438622
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    ||||||||||  |||| |||||||||| ||| ||| || ||||| |||  |||||||||||||||||| ||| ||||| | || || | |||||||||||    
T  23438407 ttatcccctcctttgaccaccacaattcttcattgggatcttgatgtatgaattgaaatgataagttgtaaatatcattacttccattttcttgtctgtt 23438506  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    || | |||||||||||| || ||||| ||| ||||| |||||||| |||||| ||| |||||||| |  | ||||| |||||||||||  ||| |||||     
T  23438507 gtaaccatgccagcatatcaatacatgatctgaaattaatgtcccgagataattgtgactaatacgagatctgtcgacttcttttccgcattccaagatg 23438606  T
Q  320 atacagtgaacggcat 335  Q
    ||||| |||| |||||    
T  23438607 atacaatgaagggcat 23438622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 36539737 - 36539627
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgt-acgccctataa 485  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||| |  ||||||||    
T  36539737 gtaaatccctataaatttcttatataatcccctataaattgggcaatttctttaaattttttgattatttgtttgcaatttcctatgtaaacccctataa 36539638  T
Q  486 atgtgttgcaa 496  Q
    |||||||||||    
T  36539637 atgtgttgcaa 36539627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 399 - 492
Target Start/End: Complemental strand, 54546998 - 54546904
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgt-acgccctataaatgtgtt 492  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||| |  |||||||||||||||    
T  54546998 tgaatttcttatataaacccctataaattggacaatttctttagatttttgattatttgcttacaatttcttatgtaaatccctataaatgtgtt 54546904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 3178808 - 3178699
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgc-cctataaa 486  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||||||  |||||| |||||||||||||||||| ||||||  | ||||||||    
T  3178808 gtaaatccctatgaatttcttatataaatctctataaattgggcaatttctttagttttttttttatttgcttgcaatttcgtatgtaaactcctataaa 3178709  T
Q  487 tgtgttgcaa 496  Q
    | ||||||||    
T  3178708 tatgttgcaa 3178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 120 - 329
Target Start/End: Original strand, 23350472 - 23350681
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    |||||||||| || || |||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| |||||| || |||| |||||  || |    
T  23350472 ttatcccctcagtcgaccaccacaatttttccttgtgaccttgaagtataaattgaaatgataggttgcaaaagtcataacttccactttcttgaatgct 23350571  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    || |  |||||| |||| || ||| | |||  |||| |||| |||||||||| ||  |||||||| || | ||||| ||||||| || | ||||||||||    
T  23350572 gtaacgatgccaacatatcaatacgtgatctaaaattaatgccccaagataattgcaactaatacgacatctgtcgacttctttgccatgttcaaagata 23350671  T
Q  320 atacagtgaa 329  Q
    | ||| ||||    
T  23350672 acacaatgaa 23350681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 329
Target Start/End: Original strand, 23461797 - 23462003
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    |||||||||||||||| |||||||||| ||| ||| ||||||||||||  |||| ||||||||||||   | |||||||| || |||| |||||| ||||    
T  23461797 ttatcccctctgttgaccaccacaattcttcattgggaccttgaagtatgaatttaaatgataagtt---acaatcataacttccactttcttgtatgtt 23461893  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    || | ||||||| |  | || ||||| ||| ||||| |||||||| |||||| ||   ||||| | |||| ||||| |||||||||||  ||||||||||    
T  23461894 gtaaccatgccaacgcatcaatacatgatctgaaattaatgtcccgagataattgaatctaatgcgacgtctgtcgacttcttttccgcattcaaagata 23461993  T
Q  320 atacagtgaa 329  Q
    ||||| ||||    
T  23461994 atacaatgaa 23462003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 401 - 487
Target Start/End: Original strand, 22845398 - 22845484
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||| ||  ||||||||||    
T  22845398 aatttcttatataaacccctataaatttgacaatttctttagattttttattatttgcttgcaattttttatataaaccctataaat 22845484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 120 - 324
Target Start/End: Original strand, 23403193 - 23403394
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    |||||||||||||||| ||||||| || ||| ||| ||||||||||||  |||||||||||||||||   | |||||||| || |||| |||||| ||||    
T  23403193 ttatcccctctgttgaccaccacagttcttcattgggaccttgaagtatgaattgaaatgataagtt---acaatcataacttccactttcttgtatgtt 23403289  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    || | ||||||| || | || ||||| ||| ||||| |||||||| |||||| ||  |||||| | |||| ||||| ||||||||||   |||||||||     
T  23403290 gtaaccatgccaacacatcaatacatgatctgaaattaatgtcccgagataattgagactaatgcgacgtctgtcgacttcttttccacattcaaagatg 23403389  T
Q  320 ataca 324  Q
    |||||    
T  23403390 ataca 23403394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 23427050 - 23427118
Alignment:
Q  20 ggggctctaagactaagaaggagaagatgaaaagaaactagctacaaaattaaaacatgtgttttcattg 89  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  23427050 ggggctctaagactaagaaggagaagatgaaaggaa-ctagctacaaaattaaaacatgtgttttcattg 23427118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 143 - 329
Target Start/End: Original strand, 23382057 - 23382240
Alignment:
Q  143 aattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgttgtgaacatgccagcataccagta 242  Q
    |||| ||| ||| ||||||||||||  ||||||||||||||||| |||   |||||| || |||| |||||| |||||| | ||||||| |||| || ||    
T  23382057 aattcttcattgggaccttgaagtatgaattgaaatgataagttacaa---tcataacttccactttcttgtatgttgtaaccatgccaccatatcaata 23382153  T
Q  243 cataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagataatacagtgaa 329  Q
    ||| ||| ||||| |||||||| |||||| ||  |||||| | |||| ||||| |||||||||||  ||||||||||||||| ||||    
T  23382154 catgatctgaaattaatgtcccgagataattgagactaatgcgacgtctgtcgacttcttttccgcattcaaagataatacaatgaa 23382240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 399 - 495
Target Start/End: Complemental strand, 8926860 - 8926762
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg-tacgccctataaatgtgttgca 495  Q
    ||||||||| ||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||| ||  || |||||||||||||||    
T  8926860 tgaatttctgatataaacccctataaatttggcaatttctgtagattttttgattatttgcttgcaatttcttatgttaacccttataaatgtgttgca 8926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 46685819 - 46685891
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatg 473  Q
    |||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||| |||||||||||||||    
T  46685819 aatttcttatataaactcctataaatttgacaatttctttatattttttattatttgtttgcaatttcttatg 46685891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 545 - 659
Target Start/End: Original strand, 23462007 - 23462121
Alignment:
Q  545 catggtggtaaacattaaagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctat 644  Q
    ||||||||| |||| | |||||| |||||| || |||||||||||| ||||  ||||| |||||||| | ||||||| ||||| ||||||||||||  ||    
T  23462007 catggtggttaacagtgaagccctcagaaaaaaggatgcaaaatatgaaaccacacaagtcagatttagcaataggaagaatagttattgaagccttgat 23462106  T
Q  645 tgtctgaaaatcaaa 659  Q
    |||||||||||||||    
T  23462107 tgtctgaaaatcaaa 23462121  T

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Target: chr3; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 33103835 - 33103738
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 497  Q
    ||||||||||||||  |||||||||||||  ||||| |||| ||||||||||||||||||| |||||||||||| |  || |||||||||||||||||    
T  33103835 aatttcttatataagtccctataaattggataatttatttaaattttttattatttgcttgtaatttcttatgtaaatccttataaatgtgttgcaaa 33103738  T

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Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 486
Target Start/End: Complemental strand, 47889823 - 47889731
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttg-caatttcttatgtacgccctataaa 486  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| | ||||||||||||| |||| |||||||| |||||  |||||||||    
T  47889823 ctatgaatttcttatataaattcctataaattgggcaatttctttaaatttttttattatttacttgacaatttctaatgtaaaccctataaa 47889731  T

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Target: chr3; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 404 - 497
Target Start/End: Complemental strand, 48206943 - 48206848
Alignment:
Q  404 ttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaaa 497  Q
    |||||||||||||||||||||||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||  | | |||||||||||||||||    
T  48206943 ttcttatataaacccctataaatttgacaatttttttagattttttgattatttacttgcaatttcttatgtaaacacttataaatgtgttgcaaa 48206848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 659
Target Start/End: Original strand, 23382244 - 23382358
Alignment:
Q  545 catggtggtaaacattaaagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctat 644  Q
    |||||| || |||| | |||||| |||||| || |||||||||||| ||||  ||||| |||||||| | ||||||| ||||| ||||||||||||  ||    
T  23382244 catggttgttaacagtgaagccctcagaaaaaaggatgcaaaatatgaaaccacacaagtcagatttagcaataggaagaatacttattgaagccttgat 23382343  T
Q  645 tgtctgaaaatcaaa 659  Q
    |||||||||||||||    
T  23382344 tgtctgaaaatcaaa 23382358  T

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Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 6280393 - 6280492
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgcc-ctataaatgtgttgcaaa 497  Q
    ||||||||||||||||||| ||||||||| | |||||| |||| |||||| || |||||||||| |||| |||||||  ||  |||||||||||||||||    
T  6280393 tgaatttcttatataaacctctataaatttgacaatttatttagatttttgataatttgcttgccattttttatgtaaacctttataaatgtgttgcaaa 6280492  T

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Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 660
Target Start/End: Original strand, 36001223 - 36001321
Alignment:
Q  562 aagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctattgtctgaaaatcaaac 660  Q
    |||||| |||| | |||||||||||| || ||||  ||||||||||||||||||||||||||||||| ||| || |||||| |||  ||||||| ||||    
T  36001223 aagccctcagagaaaatgatgcaaaaaattaaacaacacaaatcagattttggaataggaggaataactatcgaggcctctgttgattgaaaataaaac 36001321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 574 - 659
Target Start/End: Original strand, 23350714 - 23350799
Alignment:
Q  574 agaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctattgtctgaaaatcaaa 659  Q
    |||| |||||| ||||| ||||  ||||| | |||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  23350714 agaacgatgcagaatatgaaaccacacaagtaagattttggaattggaggaatacttattgaagcctctactgtcttaaaatcaaa 23350799  T

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Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 543 - 659
Target Start/End: Original strand, 23471118 - 23471234
Alignment:
Q  543 ggcatggtggtaaacattaaagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctct 642  Q
    ||||||||||| || | | |||||| |||||| || ||||| |||||| ||||  || ||  ||||||||  ||||||| ||||| |||||||||||||     
T  23471118 ggcatggtggttaatagtgaagccctcagaaaaaaggatgcgaaatatgaaaccacataagacagattttttaataggaagaatagttattgaagcctcg 23471217  T
Q  643 attgtctgaaaatcaaa 659  Q
    |||||||||||||||||    
T  23471218 attgtctgaaaatcaaa 23471234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 399 - 471
Target Start/End: Complemental strand, 51336303 - 51336231
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttctta 471  Q
    ||||||| ||||||||| |  |||||||| | ||||||||||| |||||||||||||| ||||||||||||||    
T  51336303 tgaattttttatataaatctttataaatttgacaatttctttaaattttttattatttacttgcaatttctta 51336231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 604 - 659
Target Start/End: Original strand, 23438640 - 23438695
Alignment:
Q  604 tcagattttggaataggaggaataattattgaagcctctattgtctgaaaatcaaa 659  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||    
T  23438640 tcagattttggaataggaagaatagttattgaagcctcagttgtctgaaaatcaaa 23438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 681 - 756
Target Start/End: Original strand, 23446172 - 23446247
Alignment:
Q  681 agagaaggtttgtaacatgttattaaaaaatgacggttgaatggagtatgtgtccagataagtgcaattaacggca 756  Q
    ||||||| |||||| |||||| | || ||||||| ||||| |||||| ||||||||||||||||||||||| ||||    
T  23446172 agagaagatttgtaccatgttctcaagaaatgaccgttgagtggagtctgtgtccagataagtgcaattaatggca 23446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 675 - 756
Target Start/End: Original strand, 23497915 - 23497996
Alignment:
Q  675 gtcttcagagaaggtttgtaacatgttattaaaaaatgacggttgaatggagtatgtgtccagataagtgcaattaacggca 756  Q
    ||||| ||||||| ||||||  ||||| | || ||||||| ||||| |||||| ||||||||||||||||||||||| ||||    
T  23497915 gtctttagagaagatttgtactatgttctcaagaaatgaccgttgagtggagtctgtgtccagataagtgcaattaatggca 23497996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 658
Target Start/End: Original strand, 23403420 - 23403516
Alignment:
Q  562 aagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctattgtctgaaaatcaa 658  Q
    |||||| |||||| || |||||||||||| ||||  | |||  ||||||| | ||||||| ||||| ||||||||||||| |||||||| |||||||    
T  23403420 aagccctcagaaaaaaggatgcaaaatatgaaaccacgcaagacagatttagtaataggaagaatagttattgaagcctcgattgtctgcaaatcaa 23403516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 23446045 - 23446097
Alignment:
Q  608 attttggaataggaggaataattattgaagcctctattgtctgaaaatcaaac 660  Q
    |||||||||||||||||||  |||||||||||| |||||| ||||||||||||    
T  23446045 attttggaataggaggaatggttattgaagcctttattgtttgaaaatcaaac 23446097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 562 - 665
Target Start/End: Original strand, 23477305 - 23477408
Alignment:
Q  562 aagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctattgtctgaaaatcaaaca 661  Q
    |||||| ||||||||||| |||| ||||| ||||   |||  | | |||||||||||||||||||  ||||||||||||  ||||| ||||||||||||     
T  23477305 aagccctcagaaagaatggtgcagaatatgaaaccagacaggttatattttggaataggaggaatggttattgaagccttcattgtttgaaaatcaaact 23477404  T
Q  662 tgca 665  Q
    ||||    
T  23477405 tgca 23477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 23434171 - 23434225
Alignment:
Q  606 agattttggaataggaggaataattattgaagcctctattgtctgaaaatcaaac 660  Q
    |||||||||||||||||||||  |||||||||||| | |||| ||||||||||||    
T  23434171 agattttggaataggaggaatggttattgaagcctttgttgtttgaaaatcaaac 23434225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 751
Target Start/End: Original strand, 23477466 - 23477542
Alignment:
Q  675 gtcttcagagaaggtttgtaacatgttattaaaaaatgacggttgaatggagtatgtgtccagataagtgcaattaa 751  Q
    ||||| ||||||  |||||| |||||| | || ||||||| ||||| |||||| ||| |||||||||||||||||||    
T  23477466 gtctttagagaaaatttgtaccatgttctcaagaaatgaccgttgagtggagtctgtatccagataagtgcaattaa 23477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 496
Target Start/End: Complemental strand, 791906 - 791812
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaa 496  Q
    |||||||||||||||  ||||||||||| | |||||||||| ||||||| ||||||   ||| |||||||||||||  | ||||| ||||||||||||    
T  791906 aatttcttatataaattcctataaattgcgtaatttctttatattttttgattatt---ttgtaatttcttatgtaaacacctattaatgtgttgcaa 791812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 496
Target Start/End: Original strand, 36826021 - 36826087
Alignment:
Q  432 aatttctttacattttttatt-atttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    |||||||||| |||||||| | ||||||||||| |||||||||| |  |||||||||||||||||||    
T  36826021 aatttctttaaattttttaatgatttgcttgcagtttcttatgtaaacccctataaatgtgttgcaa 36826087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 492
Target Start/End: Original strand, 19644358 - 19644458
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttcttt-acatttttt--attatttgcttgcaatttcttatgt-acgccctataaatgtgt 491  Q
    |||||||||| ||||||||| |  |||||||||  |||||| ||| | |||||||  |||||||| |||||||||||||||| |  ||||||||||||||    
T  19644358 ctatgaattttttatataaatctttataaattgaacaattttttttagattttttggattatttgattgcaatttcttatgtaattccctataaatgtgt 19644457  T
Q  492 t 492  Q
    |    
T  19644458 t 19644458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 755
Target Start/End: Original strand, 23403623 - 23403652
Alignment:
Q  726 gtatgtgtccagataagtgcaattaacggc 755  Q
    ||||||||||||||||||||||||||||||    
T  23403623 gtatgtgtccagataagtgcaattaacggc 23403652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 35806899 - 35806790
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35806899 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacaccctataaat 35806800  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  35806799 gtgttgcaaa 35806790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 22324701 - 22324593
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22324701 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 22324602  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  22324601 gtgttgcaa 22324593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 21525463 - 21525354
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21525463 gtaaatccctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 21525364  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  21525363 gtgttgcaaa 21525354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 26021501 - 26021391
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgccctataaa 486  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26021501 gtaaatccctatgaatttcttatataaacccctataaattgggtaatttctttacatttttttattatttgcttgcaatttcttatgtacgccctataaa 26021402  T
Q  487 tgtgttgcaaa 497  Q
    |||||||||||    
T  26021401 tgtgttgcaaa 26021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 33934400 - 33934501
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33934400 ctatgaatttcttatataaacccctataaattgggcaatttttttatattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 33934499  T
Q  496 aa 497  Q
    ||    
T  33934500 aa 33934501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 493
Target Start/End: Complemental strand, 42013977 - 42013872
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42013977 gtaaatccctatgaatttcttatataaactcctataaattgggcaatttctttatattttttattatttgcttgcaatttcttatgtacgccctataaat 42013878  T
Q  488 gtgttg 493  Q
    ||||||    
T  42013877 gtgttg 42013872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 42072533 - 42072424
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |  |||||||    
T  42072533 gtaaatccctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtaaacaatataaat 42072434  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  42072433 gtgttgcaaa 42072424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 24065377 - 24065291
Alignment:
Q  389 taaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  24065377 taaatctctatgaatttcttatataaactcctataaattgggcaatttctttagcttttttattatttgcttgcaatttcttatgta 24065291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 19334879 - 19334778
Alignment:
Q  397 tatgaatttcttatataaacccctataaattgggcaatttctttacatt-ttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    ||||||||| ||||||||||| ||||||||| | ||||||||||| ||| ||||||||||||||| ||||||||||||||  |||||||||| |||||||    
T  19334879 tatgaattttttatataaacctctataaattagacaatttctttaaattgttttattatttgcttacaatttcttatgtaacccctataaatatgttgca 19334780  T
Q  496 aa 497  Q
    ||    
T  19334779 aa 19334778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 21488160 - 21488084
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||    
T  21488160 tgaatttcttatagaaaccccgataaattggacaatttctttagatttttttattatt-gcttgcaatttcttatgta 21488084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 388 - 493
Target Start/End: Original strand, 16818996 - 16819105
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttcttta---cattttttattatttgcttgcaatttcttatgt-acgccctat 483  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||| ||     | |||||||||||||||||||||| |||| | |  ||||||    
T  16818996 gtaaatctccttgaatttcttatataaacccctataaattgggtaatttctctatctagtattttattatttgcttgcaattttttatataaacccctat 16819095  T
Q  484 aaatgtgttg 493  Q
    ||||||||||    
T  16819096 aaatgtgttg 16819105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 496
Target Start/End: Complemental strand, 10112139 - 10112042
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    |||||||||||||||| | |||||||||| ||||||||||  ||||||| |||||||  |||||||||||||||| |  |||||||||| ||||||||    
T  10112139 aatttcttatataaactcttataaattggacaatttcttttaattttttgattatttatttgcaatttcttatgtaaacccctataaatatgttgcaa 10112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 16523211 - 16523158
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttcttta 441  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  16523211 gtaaatccctatgaatttcttatataaatccctataaattgggcaacttcttta 16523158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 43282885 - 43282962
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttcttta-cattttttattatttgcttgcaatttcttatgta 475  Q
    ||||||| ||||||||| |||||||||||||| |||||| |||  | |||||||||||||||||| ||||||||||||    
T  43282885 tgaatttattatataaatccctataaattgggtaatttcattagaaatttttattatttgcttgctatttcttatgta 43282962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 2271289 - 2271196
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgt--acgccctataaatgtgttgcaa 496  Q
    ||||||||||||||||||||||||| ||| || |||||||||| ||||||||       ||| |||||||||||||  || |||||||||||||||||||    
T  2271289 tgaatttcttatataaacccctatatattaggtaatttctttagatttttta-------cttacaatttcttatgtaaaccccctataaatgtgttgcaa 2271197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 34697431 - 34697500
Alignment:
Q  407 ttatataaacccctataaattgggcaatttctttacatttt-ttattatttgcttgcaatttcttatgta 475  Q
    ||||||||| | |||||||||| | ||||||||||  |||| ||||||||||||||||||||||||||||    
T  34697431 ttatataaatctctataaattgagaaatttctttaattttttttattatttgcttgcaatttcttatgta 34697500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 388 - 439
Target Start/End: Original strand, 16591398 - 16591449
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctt 439  Q
    |||||| |||| |||||||||||||||| | |||||||||||||||||||||    
T  16591398 gtaaatttctaagaatttcttatataaatcactataaattgggcaatttctt 16591449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 42014052 - 42014019
Alignment:
Q  335 tcaggggcggttctaaggcccggcgatcccgggc 368  Q
    |||||||||||||||||||||||||| |||||||    
T  42014052 tcaggggcggttctaaggcccggcgaccccgggc 42014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 1e-52; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 44164766 - 44164875
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44164766 gtaaatttctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 44164865  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  44164866 gtgttgcaaa 44164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 34707221 - 34707113
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34707221 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 34707122  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  34707121 gtgttgcaa 34707113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 10576778 - 10576669
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10576778 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 10576679  T
Q  488 gtgttgcaaa 497  Q
    || |||||||    
T  10576678 gtattgcaaa 10576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 400 - 497
Target Start/End: Original strand, 24320474 - 24320571
Alignment:
Q  400 gaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320474 gaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaa 24320571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 29555970 - 29556071
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29555970 ctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 29556069  T
Q  496 aa 497  Q
    ||    
T  29556070 aa 29556071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 32876561 - 32876662
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32876561 ctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgctctataaatgtgttgca 32876660  T
Q  496 aa 497  Q
    ||    
T  32876661 aa 32876662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 485
Target Start/End: Complemental strand, 34259623 - 34259526
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataa 485  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34259623 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataa 34259526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 29238166 - 29238275
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  29238166 gtaaatccctatgaatttcttatataaacccctaaaaattggaaaatttctttacattttttattatttgcttacaatttcttatgtaggccctataaat 29238265  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  29238266 gtgttgcaaa 29238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 29981136 - 29981226
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgc 478  Q
    ||||||| |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29981136 gtaaatccctatgaatttcttatataaacttctataaattggacaatttctttatattttttattatttgcttgcaatttcttatgtacgc 29981226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 33057680 - 33057789
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgtacgccctataaa 486  Q
    ||||||| ||||||||||||||||||| |||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||   ||||||||    
T  33057680 gtaaatccctatgaatttcttatataatcccctataaattgaacaatttctttagatttttttattatttgcttgcaatttcttatgtaaatcctataaa 33057779  T
Q  487 tgtgttgcaa 496  Q
    ||||||||||    
T  33057780 tgtgttgcaa 33057789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 19334591 - 19334693
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttaca--ttttttattatttgcttgcaatttcttatgtacgccctataaatgtgttg 493  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||| ||  |||||||||| |||||    
T  19334591 ctatgaatttcttatataaacccctataaattggacaatttctttagattttttttattatttgcttgcaatttcttatataaaccctataaatttgttg 19334690  T
Q  494 caa 496  Q
    |||    
T  19334691 caa 19334693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 17303145 - 17303248
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttaca--ttttttattatttgcttgcaatttcttatgtacgcc-ctataaatgtgtt 492  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |  ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  17303145 ctatgaatttcttatataaacccttgtaaattgggcaatttctttagattttttttattatttgcttgcaatttcttatgtaaaccactataaatgtgtt 17303244  T
Q  493 gcaa 496  Q
    ||||    
T  17303245 gcaa 17303248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 10334272 - 10334173
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacat-tttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    |||||||||||||||||| | |||||||||||||||||||||| || |||||| ||||||||||||||||||||||| |  |||||||||||||||||||    
T  10334272 tgaatttcttatataaactcttataaattgggcaatttctttagatatttttaatatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 10334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 399 - 470
Target Start/End: Complemental strand, 9770753 - 9770682
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttctt 470  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| | |||| |||||||||||||||||||||    
T  9770753 tgaatttcttatataaaccactatgaattggacaatttctttagacttttgattatttgcttgcaatttctt 9770682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 390 - 496
Target Start/End: Original strand, 26284404 - 26284510
Alignment:
Q  390 aaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgt-acgccctataaatg 488  Q
    ||||| || ||||||||||||| ||||   |||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||| |  |||||||||||    
T  26284404 aaatccctctgaatttcttata-aaactagtataaattggacaatttctttagattttttattattttcttgcaatttcttttgtaaacccctataaatg 26284502  T
Q  489 tgttgcaa 496  Q
    ||||||||    
T  26284503 tgttgcaa 26284510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 15017867 - 15017817
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt 449  Q
    |||||||||||||||||| | |||||||||| ||||||||||| |||||||    
T  15017867 tgaatttcttatataaacgcgtataaattggacaatttctttagatttttt 15017817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 24320400 - 24320442
Alignment:
Q  336 caggggcggttctaaggcccggcgatcccgggctccgggccaa 378  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  24320400 caggggcggttctaaggcccgacgaacccgggctccgggccaa 24320442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 496
Target Start/End: Complemental strand, 41853226 - 41853128
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt--attatttgcttgcaatttcttatgtacgcc-ctataaatgtgttgcaa 496  Q
    |||||||||| ||||  ||||||| |||| |||||| |||| |||||||  ||||||||||||||||||  ||| ||  || |||||||||||||||||    
T  41853226 aatttcttatttaaattcctataagttggacaatttttttagatttttttgattatttgcttgcaattttctatataaacctctataaatgtgttgcaa 41853128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 5e-52; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 9231877 - 9231985
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9231877 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtatgccctataaat 9231976  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  9231977 gtgttgcaa 9231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 388 - 529
Target Start/End: Original strand, 14309821 - 14309962
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14309821 gtaaatccctatgaatttcttatataaatccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 14309920  T
Q  488 gtgttgcaaannnnnnnnncgcccaggctttacaatattcct 529  Q
    ||||||||||          ||||||||||||||||||||||    
T  14309921 gtgttgcaaattttttttttgcccaggctttacaatattcct 14309962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 24694674 - 24694783
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24694674 gtaaatccctatgaatttcttatataaactcctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 24694773  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  24694774 gtgttgcaaa 24694783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 13627645 - 13627536
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  13627645 gtaaatccctatgaatttcttatataaacccctataaattgagcaatttctttacattttttattatttgcttgtactttcttatgtacgtcctataaat 13627546  T
Q  488 gtgttgcaaa 497  Q
     |||||||||    
T  13627545 atgttgcaaa 13627536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 1727956 - 1728035
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaattt 467  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  1727956 gtaaatccctatgaatttcttatataaacccctataaattgagcaatttctttacattttttattatttccttgcaattt 1728035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 27863804 - 27863694
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgc-cctataaa 486  Q
    |||||| ||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||  |  |||||||    
T  27863804 gtaaatttctctgaatttcttatataaacccttataaattggacaatttctttagattttttattatttgtttgcaatttcttatgtaaacatctataaa 27863705  T
Q  487 tgtgttgcaaa 497  Q
    |||||||||||    
T  27863704 tgtgttgcaaa 27863694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 34103779 - 34103703
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  34103779 tgaatttcttatataaacccgtataaattgggaaatttctttagattttttattatttgtttgcaatttcttatgta 34103703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 28750684 - 28750783
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaa 496  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||  | | ||||||||||||||||    
T  28750684 tgaatttcttatataaacccctataaattgggcaatttctttaatttttttgattatttgcttgtaatttcttatgtaaactcttataaatgtgttgcaa 28750783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 13103152 - 13103246
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgt 491  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||  | |||||||||||||    
T  13103152 tgaatttcttatataaacctttataaattgggcaatttctttagattttttgattatttgcttgcaatttctaatgtaaacacctataaatgtgt 13103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 11084659 - 11084606
Alignment:
Q  444 ttttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11084659 ttttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaa 11084606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 11212765 - 11212689
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    ||||||| || |||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  11212765 tgaattttttctataaatccctataaattgggcaatttctttagatttttaattatttgcttgtaatttcttatgta 11212689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 11279634 - 11279536
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    ||||||| |||||||||  | |||||||| || |||||||||| |||||||||||||||||||||||||||||||| |  | |||||||||||||||||    
T  11279634 tgaattttttatataaattcttataaatttggtaatttctttagattttttattatttgcttgcaatttcttatgtaaatctctataaatgtgttgcaa 11279536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 24497608 - 24497646
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttc 437  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24497608 tgaatttcttatataaacccctataaattgggcaatttc 24497646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 8412717 - 8412757
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttcttta 441  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  8412717 aatttcttatataaacgcctataaattgggcaatttcttta 8412757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 493
Target Start/End: Original strand, 24500767 - 24500830
Alignment:
Q  432 aatttctttacatttt-ttattatttgcttgcaatttcttatgtacgccc-tataaatgtgttg 493  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  24500767 aatttctttagatttttttattatttgcttgcaatttcatatgtaaacccttataaatgtgttg 24500830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 3e-50; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 23218590 - 23218481
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23218590 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtactccctataaat 23218491  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  23218490 gtgttgcaaa 23218481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 37169056 - 37169165
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37169056 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 37169155  T
Q  488 gtgttgcaaa 497  Q
    |||| |||||    
T  37169156 gtgtggcaaa 37169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 38397703 - 38397595
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38397703 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgtcctataaat 38397604  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  38397603 gtgttgcaa 38397595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 6257433 - 6257542
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6257433 gtaaatccctatgaatttcttatacaaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatatacgccctataaat 6257532  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  6257533 gtgttgcaaa 6257542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 396 - 539
Target Start/End: Original strand, 39862518 - 39862660
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  39862518 ctatgaatttcttatataaacccctataaattgggcaatttctttagattttttattatttgcttgcaatttcttatatacgccctaaaaatgtgttgca 39862617  T
Q  496 aannnnnnnnncgcccaggctttacaatattcctggcttcgccg 539  Q
    ||          |||||||||||||||||||||||||| |||||    
T  39862618 aattttttttt-gcccaggctttacaatattcctggctccgccg 39862660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 16618593 - 16618701
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16618593 gtaaatccctatgaatttcttatataaactcctataaattggacaatttttttatattttttattatttgcttgcaatttcttatgtacgccctataaat 16618692  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  16618693 gtgttgcaa 16618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 389 - 493
Target Start/End: Complemental strand, 15631718 - 15631613
Alignment:
Q  389 taaatctctatgaatttcttatataaacccc-tataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15631718 taaatccctatgaatttcttatataaaccccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 15631619  T
Q  488 gtgttg 493  Q
    | ||||    
T  15631618 gcgttg 15631613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 10081250 - 10081140
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgtacgc-cctataa 485  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||  | |||||||    
T  10081250 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttagatttttttattatttgcttacaatttcttatgtaaactcctataa 10081151  T
Q  486 atgtgttgcaa 496  Q
    |||||||||||    
T  10081150 atgtgttgcaa 10081140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 8456986 - 8457096
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgt-acgccctataa 485  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |  ||||||||    
T  8456986 gtaaatccctatgaatttcttatataaccccctataaattgggcaatttctttagatttttttattatttgcttgcaatttcttatgtaaacccctataa 8457085  T
Q  486 atgtgttgcaa 496  Q
    || ||||||||    
T  8457086 atatgttgcaa 8457096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 36769108 - 36769207
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 497  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| |||||| ||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  36769108 tgaatttcttatataaacctctatgaattaggcaatttctttagatttttgattatttgcttgcaatttcatatgtaaacccctataaatgtgttgcaaa 36769207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 475
Target Start/End: Original strand, 9738008 - 9738094
Alignment:
Q  390 aaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||    
T  9738008 aaatccctatgaatttcttatataaatccctataaattggacaatttctttagattttttgtttatttgcttgcaatttcttatgta 9738094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 11856400 - 11856290
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataa 485  Q
    ||||||| || ||||||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||  | |||||||    
T  11856400 gtaaatcgctctgaatttcttatataaatcactataaattgggcaatttctttagattttttgattatttacttgcaatttcttatgtaaactcctataa 11856301  T
Q  486 atgtgttgcaa 496  Q
    || ||||||||    
T  11856300 atatgttgcaa 11856290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 25560350 - 25560460
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatt-ttttattatttgcttgcaatttcttatgtacgccc-tataa 485  Q
    |||||||  ||| ||||||||||||||||  ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||  ||| |||||    
T  25560350 gtaaatccttataaatttcttatataaacatctataaattggacaatttctttagattattttattatttgcttgcaatttcttatgtaaacccatataa 25560449  T
Q  486 atgtgttgcaa 496  Q
    |||||||||||    
T  25560450 atgtgttgcaa 25560460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 399 - 493
Target Start/End: Original strand, 614426 - 614522
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgtacgc-cctataaatgtgttg 493  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  614426 tgaattttttatataaatccctataaatttggcaatttctttagatttttttattatttgcttgcaatttcttatgtaaacacctataaatgtgttg 614522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 6174840 - 6174762
Alignment:
Q  399 tgaatttcttatataaacccc--tataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  6174840 tgaatttcttatataaacccccctataaattggacaatttctttatattttttattatttgcttgcaatttcctatgta 6174762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 42119716 - 42119617
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| | |||||||||||||| ||| |||||||||||| |  |||||||||||||||||||    
T  42119716 tgaatttcttatataaacctctataaattggacaatttctttagatttttttattatttgtttgtaatttcttatgtaaacccctataaatgtgttgcaa 42119617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 399 - 472
Target Start/End: Original strand, 33271304 - 33271377
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttat 472  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  33271304 tgaatttcttatataaacctctataaattggacaatttctttatattttttattatttgtttgtaatttcttat 33271377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 27916234 - 27916133
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgt--acgccctataaatgtgttgca 495  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| | |||||||||||||| |||||||||||||| |  ||  |||||||||||||||||    
T  27916234 tgaatttcttatataaactcctataaattgagcaatttcattagatttttttattatttgtttgcaatttcttatataaacctcctataaatgtgttgca 27916135  T
Q  496 aa 497  Q
    ||    
T  27916134 aa 27916133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 388 - 473
Target Start/End: Original strand, 29491437 - 29491521
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 473  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  29491437 gtaaatttctatgaatttcttatataa-cccctataaattggacaatt-ctttaaattttttgattatttgcttgcaatttcttatg 29491521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 29790251 - 29790328
Alignment:
Q  397 tatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    |||||||||||||||||||||  ||||||||||||||||||||||  ||||| |||||||||||  |||||||||||||    
T  29790251 tatgaatttcttatataaacctttataaattgggcaatttcttta-gtttttgattatttgcttttaatttcttatgta 29790328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 10115251 - 10115185
Alignment:
Q  402 atttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaattt 467  Q
    |||||||||||||||||| ||||||| | ||||||||||| ||||||| ||||||||||||||||||    
T  10115251 atttcttatataaaccccaataaattagacaatttctttagattttttaattatttgcttgcaattt 10115185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 3341162 - 3341230
Alignment:
Q  407 ttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    |||||||| ||||||||||||||| ||||||||||  ||||| ||||||||||| |||||| |||||||    
T  3341162 ttatataatcccctataaattgggaaatttctttagctttttgattatttgctttcaattttttatgta 3341230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 19322058 - 19322106
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt 449  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  19322058 aatttcttatataaactcctataaattgggcaattactttagatttttt 19322106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 23218664 - 23218632
Alignment:
Q  336 caggggcggttctaaggcccggcgatcccgggc 368  Q
    |||||||||||||||||||||||||||||||||    
T  23218664 caggggcggttctaaggcccggcgatcccgggc 23218632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 33188403 - 33188451
Alignment:
Q  426 ttgggcaatttctttacattttttattatttgcttgcaatttcttatgt 474  Q
    ||||||||||||  || ||||||||||||||||||| ||||||||||||    
T  33188403 ttgggcaatttcaataaattttttattatttgcttgtaatttcttatgt 33188451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 10052523 - 10052606
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttcttt-acattttttattatttgcttgcaatttctt 470  Q
    ||||||| || |||| | |||||||||||  ||||||||| || ||||||||| | |||||  |||||||||||||||||||||    
T  10052523 gtaaatccctctgaactacttatataaacgtctataaattaggtaatttctttaaaattttagattatttgcttgcaatttctt 10052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 16618517 - 16618551
Alignment:
Q  334 atcaggggcggttctaaggcccggcgatcccgggc 368  Q
    ||||||||||||||||||||||||||| |||||||    
T  16618517 atcaggggcggttctaaggcccggcgaccccgggc 16618551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 496
Target Start/End: Complemental strand, 22903329 - 22903252
Alignment:
Q  423 aaattgggcaatttcttta-cattttttat--tatttgcttgcaatttcttatgtacgcc-ctataaatgtgttgcaa 496  Q
    |||||||||||||||||||   ||||||||  | ||||||||||||||||||||||  || |||||||||||||||||    
T  22903329 aaattgggcaatttctttagttttttttattctttttgcttgcaatttcttatgtaaacctctataaatgtgttgcaa 22903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 37168981 - 37169014
Alignment:
Q  335 tcaggggcggttctaaggcccggcgatcccgggc 368  Q
    |||||||||||||||||||||||||| |||||||    
T  37168981 tcaggggcggttctaaggcccggcgaccccgggc 37169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 3e-50; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 1535876 - 1535767
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1535876 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtatgccctataaat 1535777  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  1535776 gtgttgcaaa 1535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 49284462 - 49284353
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49284462 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgtttgcaatttcttatgtacgccctataaat 49284363  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  49284362 gtgttgcaaa 49284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 25954847 - 25954746
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25954847 ctatgaatttcttatataaactcctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 25954748  T
Q  496 aa 497  Q
    ||    
T  25954747 aa 25954746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 396 - 493
Target Start/End: Complemental strand, 34241090 - 34240993
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttg 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34241090 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttg 34240993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 52632623 - 52632514
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52632623 gtaaatccctatgaatttcttatataaatccctataaattgggcaatttctttacattttttaatatttgcttgcaatttcttatgtacgccctataaat 52632524  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  52632523 gtgttgcaaa 52632514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 37801287 - 37801396
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37801287 gtaaatttctatgaattttttatataaatccctataaattgggcaaattctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 37801386  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  37801387 gtgttgcaaa 37801396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 493
Target Start/End: Original strand, 46583564 - 46583669
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46583564 gtaaatccctatgaatttcttatataaacccctataaattaggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccatataaat 46583663  T
Q  488 gtgttg 493  Q
    ||||||    
T  46583664 gtgttg 46583669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 36012208 - 36012317
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | |||||||    
T  36012208 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaattttttatgtatgtcatataaat 36012307  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  36012308 gtgttgcaaa 36012317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 35019033 - 35018932
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  35019033 ctatgaatttcttatataaacccttataaattaggtaatttctttacattttttattatttgcttgcaatttcttatgtacaccttataaatgtgttgca 35018934  T
Q  496 aa 497  Q
    ||    
T  35018933 aa 35018932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 17888581 - 17888683
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttg 493  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  17888581 ctatgaatttcttatataaccccctataaattgggcaatttctttagatttttttattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 17888680  T
Q  494 caa 496  Q
    |||    
T  17888681 caa 17888683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 430 - 496
Target Start/End: Original strand, 16338309 - 16338375
Alignment:
Q  430 gcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaa 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16338309 gcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaa 16338375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 31377495 - 31377385
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgcc-ctataa 485  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||  || ||||||    
T  31377495 gtaaatccctatgaatttcttatataaccctctataaattgggcaatttctttagattttttaactatttgcttgcaatttcttatgtaaaccgctataa 31377396  T
Q  486 atgtgttgcaa 496  Q
    |||||||||||    
T  31377395 atgtgttgcaa 31377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 400 - 496
Target Start/End: Original strand, 322584 - 322682
Alignment:
Q  400 gaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaa 496  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||  | ||| ||||||||||||||    
T  322584 gaatttcttatataaacccctataaattggacaatttctttaaattttttgattatttgcttgcaatttcttatgtaaacacctgtaaatgtgttgcaa 322682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 16338244 - 16338318
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttctt 470  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16338244 ctatgaattttttatataaatccctataaattggacaatttctttacattttttattatttgcttgcaatttctt 16338318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 54090285 - 54090176
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaa-tttcttatgtacgccctataaa 486  Q
    ||||||| || ||||||| |||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||  ||||||| |    
T  54090285 gtaaatccctctgaatttattatataaactcttataaattgggcaatttttttagattttttattatttgcttgcaatttttttatgtaaaccctataga 54090186  T
Q  487 tgtgttgcaa 496  Q
    ||||||||||    
T  54090185 tgtgttgcaa 54090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 20818672 - 20818584
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||| |||| ||||||| |||||||| |||||||||||||||||    
T  20818672 gtaaatccctatgaatttcttatataaactcctataaattggtcaatttttttagattttttgattatttgtttgcaatttcttatgta 20818584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 12792254 - 12792365
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttt-tattatttgcttgcaatttcttatgtacgc-cctataa 485  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||| |||||||||| ||  |  ||||||    
T  12792254 gtaaatttctctgaatttcttatataaacccctataaattgggcaattactttagatttttagattatttgcttgaaatttcttatataaacatctataa 12792353  T
Q  486 atgtgttgcaaa 497  Q
    ||||||||||||    
T  12792354 atgtgttgcaaa 12792365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 9742567 - 9742661
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgt 491  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||  | |||||||||||||    
T  9742567 tgaatttcttatattaacccctataaattgggcaatttctttagattttttgattattttcatgcaatttcttatgtaaacacctataaatgtgt 9742661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 10094416 - 10094495
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatt 466  Q
    |||||| ||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||    
T  10094416 gtaaatttctctgaatttcttatataaacccctataaattgggtaatttatttagattttttgattatttgcttgcaatt 10094495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 11054561 - 11054448
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttcttta-catttttt---attatttgcttgcaatttcttatgtacgcc-cta 482  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||  |||||||    |||||||||||||||||||||||||  ||  ||    
T  11054561 gtaaatccctatgaatttcttatataaacctctataaattgggcaatctctttagtattttttttatttatttgcttgcaatttcttatgtaaaccttta 11054462  T
Q  483 taaatgtgttgcaa 496  Q
    ||||||||||||||    
T  11054461 taaatgtgttgcaa 11054448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 50328888 - 50328790
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgtacgccc-tataaatgtgttgcaaa 497  Q
    ||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||  |||||||||| |||||||  ||| |||||||||||||||||    
T  50328888 aatttcttatataaacctctataaattggacaatttctttaaatttttttattattcacttgcaattttttatgtaaacccttataaatgtgttgcaaa 50328790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 389 - 496
Target Start/End: Original strand, 35322728 - 35322837
Alignment:
Q  389 taaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgt-acgccctataaa 486  Q
    ||||| ||| ||||| ||||||||||||| ||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||| | |  |||||||||    
T  35322728 taaatttctctgaatctcttatataaacctctataaattgaacaatttctttagattttttgattatttgcttgcaatttcttatataaacccctataaa 35322827  T
Q  487 tgtgttgcaa 496  Q
     |||||||||    
T  35322828 agtgttgcaa 35322837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 46474088 - 46473988
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttt-tattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    ||||||| |||||||||||| |||||||||  ||||||||||| |||||| ||||||||||||| |||||||||||| |  || ||||||||||||||||    
T  46474088 tgaattttttatataaacccatataaattgtacaatttctttagatttttgtattatttgcttgtaatttcttatgtaaatccttataaatgtgttgcaa 46473989  T
Q  497 a 497  Q
    |    
T  46473988 a 46473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 47084117 - 47084056
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt 449  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  47084117 gtaaatttctctgaatttcttatataaacccctataaattgggtaatttctttagatttttt 47084056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 660
Target Start/End: Complemental strand, 12898243 - 12898192
Alignment:
Q  609 ttttggaataggaggaataattattgaagcctctattgtctgaaaatcaaac 660  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  12898243 ttttggaataggaggaataactattgacgcctctattgtttgaaaatcaaac 12898192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 34241161 - 34241118
Alignment:
Q  335 tcaggggcggttctaaggcccggcgatcccgggctccgggccaa 378  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  34241161 tcaggggcggttctaaggcccggcgaccccgggctccgggccaa 34241118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 19124772 - 19124849
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgta 475  Q
    ||||||||||||||||||  || |||||||  ||||||||||| | ||||||||||||| ||| ||||||||||||||    
T  19124772 tgaatttcttatataaacatctgtaaattgatcaatttctttaaatttttttattatttacttacaatttcttatgta 19124849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 5780790 - 5780838
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt 449  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||    
T  5780790 aatttcttatataaatccttataaattgggcaatttctttaaatttttt 5780838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 25954914 - 25954875
Alignment:
Q  339 gggcggttctaaggcccggcgatcccgggctccgggccaa 378  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  25954914 gggcggttctaaggcccggcgaccccgggctccgggccaa 25954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 16338161 - 16338194
Alignment:
Q  335 tcaggggcggttctaaggcccggcgatcccgggc 368  Q
    |||||||||||||||||||||||||| |||||||    
T  16338161 tcaggggcggttctaaggcccggcgaccccgggc 16338194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 14186461 - 14186570
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14186461 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacactttttattatttgcttgcaatttcttatgtacgccctataaat 14186560  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  14186561 gtgttgcaaa 14186570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 14942067 - 14942176
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14942067 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccttataaat 14942166  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  14942167 gtgttgcaaa 14942176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 42769781 - 42769890
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42769781 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtatgccctataaat 42769880  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  42769881 gtgttgcaaa 42769890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 29846547 - 29846439
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29846547 gtaaatccctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 29846448  T
Q  488 gtgttgcaa 496  Q
    |||||||||    
T  29846447 gtgttgcaa 29846439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 19181645 - 19181544
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19181645 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtatgccctataaatgtgttgca 19181546  T
Q  496 aa 497  Q
    ||    
T  19181545 aa 19181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 40277311 - 40277420
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40277311 gtaaatccctataaatttcttatataaatccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 40277410  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  40277411 gtgttgcaaa 40277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 389 - 497
Target Start/End: Original strand, 1387312 - 1387421
Alignment:
Q  389 taaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccc-tataaat 487  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||| || ||||    
T  1387312 taaatccctatgaatttcttagataaacccctataaattgggtaatttctttagattttttattatttgcttgcaatttcttatgtaaacccttacaaat 1387411  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  1387412 gtgttgcaaa 1387421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 3597903 - 3597999
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaaa 497  Q
    |||||||| | |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  3597903 aatttcttgtgtaaatccctataaattggacaatttctttacattttttattatttacttgcaatttcttacgtacgccctataaatgtattgcaaa 3597999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 6318481 - 6318592
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttaca--ttttttattatttgcttgcaatttcttatgtacg-ccctata 484  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||  ||||| | |||||||    
T  6318481 gtaaatccctatgaatttcttatataaatccctataaattgggcaatttctttagattttttttattatttgcttgcaatttcaaatgtaagcccctata 6318580  T
Q  485 aatgtgttgcaa 496  Q
    ||||||||||||    
T  6318581 aatgtgttgcaa 6318592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 3956677 - 3956567
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttcttt-acattttttattatttgcttgcaatttcttatgtacgcc-ctataa 485  Q
    ||||||| |||||||||| |||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||||||||  |||||  || ||||||    
T  3956677 gtaaatccctatgaatttattatataaacccctgtaaattggacaatttctttaaaattttttattatttgcttgcaatttcaaatgtaaacctctataa 3956578  T
Q  486 atgtgttgcaa 496  Q
    |||||||||||    
T  3956577 atgtgttgcaa 3956567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 41674729 - 41674841
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt--attatttgcttgcaatttcttatgt-acgccctata 484  Q
    |||||||||| ||||||| |||||||||||| |||||||||| ||||||||||| |||||||  | ||||||||||||||||||||| | |  |||||||    
T  41674729 gtaaatctctctgaattttttatataaacccttataaattggacaatttctttagatttttttaactatttgcttgcaatttcttatataaatccctata 41674828  T
Q  485 aatgtgttgcaaa 497  Q
    |||||||||||||    
T  41674829 aatgtgttgcaaa 41674841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 472
Target Start/End: Complemental strand, 43139839 - 43139766
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttaca--ttttttattatttgcttgcaatttcttat 472  Q
    |||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||    
T  43139839 aatttcttatataaacccctataaattgagcaatttctttagattttttttattatttgcttgcaatttcttat 43139766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 14539738 - 14539838
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaa 496  Q
    |||||||||||||||||  |||||||||| ||||||||||||| | ||||||||||||| ||||||||||||||| ||  | ||||||||||||||||||    
T  14539738 tgaatttcttatataaattcctataaattaggcaatttctttagatttttttattattttcttgcaatttcttatataaacacctataaatgtgttgcaa 14539837  T
Q  497 a 497  Q
    |    
T  14539838 a 14539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 389 - 497
Target Start/End: Complemental strand, 33009777 - 33009666
Alignment:
Q  389 taaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttt--ttattatttgcttgcaatttcttatgtacgccc-tataa 485  Q
    |||||| |||||||||| ||||||||| || |||||||||| ||||||||||| |||||  |||||||||||||||||||| |||||||  ||| |||||    
T  33009777 taaatccctatgaatttgttatataaatccttataaattggacaatttctttagatttttattattatttgcttgcaattttttatgtaaacccatataa 33009678  T
Q  486 atgtgttgcaaa 497  Q
    | ||||||||||    
T  33009677 acgtgttgcaaa 33009666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 40780150 - 40780050
Alignment:
Q  399 tgaatttcttatataaac-ccctataaattgggcaatttctttacatttttta-ttatttgcttgcaatttcttatgtacgcc-ctataaatgtgttgca 495  Q
    |||||||||||||||||| ||||||||||| | |||||| |||| |||||||| |||||||||||||||||||||||||  || |||||||| |||||||    
T  40780150 tgaatttcttatataaacaccctataaatttgacaatttttttaaattttttaattatttgcttgcaatttcttatgtaaaccgctataaatatgttgca 40780051  T
Q  496 a 496  Q
    |    
T  40780050 a 40780050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 28321737 - 28321836
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 496  Q
    ||||| |||||||||||||| |||||||||||||||||| ||  ||||||| ||||||||||| ||||||||||| | |  |||||||||||||||||||    
T  28321737 tgaatatcttatataaacccttataaattgggcaatttcattgaattttttgattatttgcttccaatttcttatataaacccctataaatgtgttgcaa 28321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 496
Target Start/End: Original strand, 23685406 - 23685503
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgccc-tataaatgtgttgcaa 496  Q
    ||||||||||||||| || |||||||| | |||||| |||| || |||| ||||||||||||||||||||||||||  ||| ||||||| ||||||||    
T  23685406 aatttcttatataaatccttataaatttgacaatttatttatatattttgattatttgcttgcaatttcttatgtaaacccttataaatatgttgcaa 23685503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 2888146 - 2888058
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgta 475  Q
    |||||||||||||||||| |||||||||| |||||||||||  |||||| |||| | |||||||||| ||||| ||||  |||||||||    
T  2888146 gtaaatctctatgaattttttatataaactcctataaattgaacaatttttttagatttttttattaattgctagcaaagtcttatgta 2888058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 472
Target Start/End: Complemental strand, 25665316 - 25665244
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttat 472  Q
    ||||||||||||||||   ||||||||||| ||||||||||  |||||| |||||||||||||||||| ||||    
T  25665316 aatttcttatataaacatttataaattgggtaatttctttaagttttttgattatttgcttgcaattttttat 25665244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 414 - 496
Target Start/End: Complemental strand, 32486323 - 32486239
Alignment:
Q  414 aacccctataaattgggcaatttctttacatttttta-ttatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaa 496  Q
    ||||||||||||||||| ||||| || | |||||||| |||||||||||||||||||||| ||  | | ||||||||||||||||    
T  32486323 aacccctataaattgggtaattttttaagattttttaattatttgcttgcaatttcttatataaacacttataaatgtgttgcaa 32486239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 3e-50; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 3346891 - 3346782
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3346891 gtaaatccctatgaatttcttatataaacccctataaattggacaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 3346792  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  3346791 gtgttgcaaa 3346782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 7742802 - 7742911
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7742802 gtaaatccttatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 7742901  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  7742902 gtgttgcaaa 7742911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 49902573 - 49902464
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49902573 gtaaatccctatgaatttcttatataaacccctataaatagggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 49902474  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  49902473 gtgttgcaaa 49902464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 29149571 - 29149680
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  29149571 gtaaatccctatgaatttcttatataaacccctataaattgggcaatttctttacgttttttattatttgcttgcaatttcttatgtacgccctatacat 29149670  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  29149671 gtgttgcaaa 29149680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 48392429 - 48392538
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48392429 gtaaatccctatgaatttcttatataaatccctataaattgggcaatttcattacattttttattatttgcttgcaatttcttatgtacgccctataaat 48392528  T
Q  488 gtgttgcaaa 497  Q
    ||||||||||    
T  48392529 gtgttgcaaa 48392538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 388 - 493
Target Start/End: Complemental strand, 5975093 - 5974988
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5975093 gtaaatccctaagaatttcttatataaacccctataaattaggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 5974994  T
Q  488 gtgttg 493  Q
    ||||||    
T  5974993 gtgttg 5974988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 388 - 497
Target Start/End: Original strand, 42517317 - 42517430
Alignment:
Q  388 gtaaatctctatgaatttcttatataaac----ccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctat 483  Q
    ||||||| |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42517317 gtaaatccctatgaatttcttatataaacaaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctat 42517416  T
Q  484 aaatgtgttgcaaa 497  Q
    ||||||||||||||    
T  42517417 aaatgtgttgcaaa 42517430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 396 - 497
Target Start/End: Original strand, 10156047 - 10156148
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10156047 ctatgaatttcttatataaacttctataaattggacaatttctttatattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 10156146  T
Q  496 aa 497  Q
    ||    
T  10156147 aa 10156148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 388 - 497
Target Start/End: Complemental strand, 47022807 - 47022698
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaat 487  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  47022807 gtaaatctctatgaatttcttatataaactcctataaattaggcaatttctttatattttttattatttacttgtaatttcttatgtacgccctataaat 47022708  T
Q  488 gtgttgcaaa 497  Q
     |||||||||    
T  47022707 atgttgcaaa 47022698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 23908382 - 23908282
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 495  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23908382 ctatgaatttcttatataaatccctataaattggacaatttctttatgttttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgca 23908283  T
Q  496 a 496  Q
    |    
T  23908282 a 23908282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 396 - 493
Target Start/End: Complemental strand, 38859948 - 38859849
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttaca-ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttg 493  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  38859948 ctatgaatttcttatataaacccctataaattgggcaatttttttagatttttttattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 38859849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 10907682 - 10907781
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgc-cctataaatgtgttgcaa 496  Q
    ||||||||||||||||||||||||||||  | ||||||||||| ||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||    
T  10907682 tgaatttcttatataaacccctataaatcagacaatttctttagattttttgattatttgcttgcaatttcttatgtagacacctataaatgtgttgcaa 10907781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 400 - 468
Target Start/End: Complemental strand, 5558402 - 5558334
Alignment:
Q  400 gaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttc 468  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  5558402 gaatttcttatataaacccctataaattggacaatttctttagatttttgattatttgcttgcaatttc 5558334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 26835434 - 26835332
Alignment:
Q  397 tatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgccc-tataaatgtgttgc 494  Q
    |||||||||||||||||||| |||||||||||  |||||| |||| ||||||| |||||||||||||||||||| |||||  ||| ||||||||||||||    
T  26835434 tatgaatttcttatataaactcctataaattgaacaatttttttagattttttgattatttgcttgcaatttctcatgtaaacccatataaatgtgttgc 26835335  T
Q  495 aaa 497  Q
    |||    
T  26835334 aaa 26835332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 30745449 - 30745361
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    |||||| ||| |||||||||| |||||| ||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  30745449 gtaaatttctctgaatttcttttataaatccctataaattggacaatttctttaaattttttgattatttacttgcaatttcttatgta 30745361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 30766900 - 30766812
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    |||||| ||| |||||||||| |||||| ||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  30766900 gtaaatttctctgaatttcttttataaatccctataaattggacaatttctttaaattttttgattatttacttgcaatttcttatgta 30766812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 396 - 496
Target Start/End: Complemental strand, 42456669 - 42456566
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttcttt-acattttttattatttgcttgcaatttcttatgt--acgccctataaatgtgtt 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |   |||||||| | |||||||||||||||||  |  |||||||||||||||    
T  42456669 ctatgaatttcttatataaacccctataaattgggcaatttctttaaaaaaatttattatctacttgcaatttcttatgtaaatcccctataaatgtgtt 42456570  T
Q  493 gcaa 496  Q
    ||||    
T  42456569 gcaa 42456566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 30252787 - 30252856
Alignment:
Q  407 ttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    ||||||||| ||||||||||| | ||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  30252787 ttatataaatccctataaattagacaacttctttagattttttgattatttgcttgcaatttcttatgta 30252856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 37189745 - 37189697
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaattt 436  Q
    |||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  37189745 gtaaatctctatgaatttcttatataaatctctataaattggacaattt 37189697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 497
Target Start/End: Original strand, 44107430 - 44107522
Alignment:
Q  407 ttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 497  Q
    |||||||||||||||||||||    |||||||| | ||||||| ||||||| ||||||||||||||||| |  || |||||||||||||||||    
T  44107430 ttatataaacccctataaattaattaatttcttcagattttttgattatttacttgcaatttcttatgtaaaaccttataaatgtgttgcaaa 44107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 45968761 - 45968685
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    ||||||| |||||||| | | |||||||||| |||||| | || |||||| ||||||| ||||||||||||||||||    
T  45968761 tgaattttttatataatctcttataaattggacaatttttatagatttttgattatttacttgcaatttcttatgta 45968685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 14796970 - 14796871
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgccc-tataaatgtgttgcaa 496  Q
    ||||||||||||||| || | |||||||| ||| ||| ||||| ||||||  | ||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  14796970 tgaatttcttatatacacacttataaattaggccattactttagatttttcgaatatttgcttgcaatttcttatgtaaacccgtataaatgtattgcaa 14796871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 14805844 - 14805745
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgtacgccc-tataaatgtgttgcaa 496  Q
    ||||||||||||||| || | |||||||| ||| ||| ||||| ||||||  | ||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  14805844 tgaatttcttatatacacacttataaattaggccattactttagatttttcgaatatttgcttgcaatttcttatgtaaacccgtataaatgtattgcaa 14805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 13131988 - 13131914
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttcttatgta 475  Q
    ||||| ||||||||| | ||||||||||| |||||||||||  |||||  |||| | ||||||||||||||||||    
T  13131988 aattttttatataaatcactataaattggacaatttctttagctttttacttatctccttgcaatttcttatgta 13131914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 399 - 471
Target Start/End: Original strand, 26511667 - 26511739
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttctta 471  Q
    |||||||||||||||||  ||| |||||||   |||||||||| |||||| ||||||| ||| ||||||||||    
T  26511667 tgaatttcttatataaattcctgtaaattgaataatttctttaaatttttgattatttacttacaatttctta 26511739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 474
Target Start/End: Original strand, 8430508 - 8430551
Alignment:
Q  432 aatttctttacatttt-ttattatttgcttgcaatttcttatgt 474  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  8430508 aatttctttaaatttttttattatttgcttgcaatttcttatgt 8430551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 68; Significance: 6e-30; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 120 - 329
Target Start/End: Original strand, 9969 - 10175
Alignment:
Q  120 ttatcccctctgttgaacaccacaattgttccttgtgaccttgaagtagaaattgaaatgataagttgcaaaaatcataagtttcactatcttgtctgtt 219  Q
    |||||||||||||||| |||||||||| ||| ||| ||||||||||||  |||| ||||||||||||   | |||||||| || || | |||||||| ||    
T  9969 ttatcccctctgttgaccaccacaattcttcattgggaccttgaagtatgaatttaaatgataagtt---acaatcataacttccattttcttgtctatt 10065  T
Q  220 gtgaacatgccagcataccagtacataatcagaaatgaatgtcccaagataactgtcactaatacaacgtatgtcggcttcttttccgttttcaaagata 319  Q
    || | |||||||||||| || ||||| ||| ||||| ||||||||| ||||| ||| |||||| |   || ||||| |||||||||||  ||||||||||    
T  10066 gtaaccatgccagcatatcaatacatgatctgaaattaatgtcccatgataattgtgactaatgcgctgtctgtcgacttcttttccgcgttcaaagata 10165  T
Q  320 atacagtgaa 329  Q
    ||||| ||||    
T  10166 atacaatgaa 10175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 10196 - 10293
Alignment:
Q  562 aagcccacagaaagaatgatgcaaaatataaaactgcacaaatcagattttggaataggaggaataattattgaagcctctattgtctgaaaatcaaa 659  Q
    |||||| |||||||||||||||||||||| ||||  ||||| |||||||||| ||||||| |||||  |||||||||| | |||||||||||||||||    
T  10196 aagccctcagaaagaatgatgcaaaatatgaaaccacacaagtcagattttgtaataggaagaatagatattgaagccccgattgtctgaaaatcaaa 10293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 430 - 496
Target Start/End: Complemental strand, 54551 - 54485
Alignment:
Q  430 gcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaa 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54551 gcaatttctttacattttttattatttgcttgcaatttcttatgtacgccctataaatgtgttgcaa 54485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 54616 - 54542
Alignment:
Q  396 ctatgaatttcttatataaacccctataaattgggcaatttctttacattttttattatttgcttgcaatttctt 470  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  54616 ctatgaattttttatataaatccctataaattggacaatttctttacattttttattatttgcttgcaatttctt 54542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 54699 - 54666
Alignment:
Q  335 tcaggggcggttctaaggcccggcgatcccgggc 368  Q
    |||||||||||||||||||||||||| |||||||    
T  54699 tcaggggcggttctaaggcccggcgaccccgggc 54666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 388 - 475
Target Start/End: Original strand, 34475 - 34563
Alignment:
Q  388 gtaaatctctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatgta 475  Q
    ||||||| || ||||||  ||||||||| | ||||||||||| || |||||||| ||||||| ||||||||||| ||||||||||||||    
T  34475 gtaaatccctctgaattctttatataaatctctataaattggacagtttctttagattttttgattatttgcttacaatttcttatgta 34563  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 399 - 449
Target Start/End: Original strand, 20865 - 20915
Alignment:
Q  399 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt 449  Q
    ||||||||||||||||| | ||||||||||| |||||| |||| |||||||    
T  20865 tgaatttcttatataaagctctataaattggacaatttttttagatttttt 20915  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 85592 - 85547
Alignment:
Q  401 aatttcttatataaacccctataaattgggcaatttctttacattt 446  Q
    ||||| ||||| ||| ||||||||||||| ||||||||||||||||    
T  85592 aattttttataaaaatccctataaattggacaatttctttacattt 85547  T

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