View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14121_low_20 (Length: 256)
Name: NF14121_low_20
Description: NF14121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14121_low_20 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 2620569 - 2620329
Alignment:
| Q |
16 |
gtttttccatcaacattgcaacaacaattgttgttgcataatgtctttttgaggtgtcttcagggctggtttagtggggaaagattatatgtggtttttt |
115 |
Q |
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| T |
2620569 |
gtttttccatcaacattgcaacaacaattgttgttgcataatgtctttttgaggtgtcttcagggctggtttagtggggaaagattatatgtggtttttt |
2620470 |
T |
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| Q |
116 |
gtcaatccgacattcagttgtatggttcgtctggacaacccgtactactattttgtttttaggtaagccttttgatgagaaagaactgattaataaactt |
215 |
Q |
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| T |
2620469 |
gtcaatccgacattcagttgtatggttcgtctggacaacccgtactactattttgtttttaggtaagccttttgatgagaaagaactgatcgataaactt |
2620370 |
T |
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| Q |
216 |
tgtatattcgcattgtggcaaaagcaatcaacactaacctg |
256 |
Q |
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| T |
2620369 |
tgtatattcgcattgtggcaaaagcaatcaacactaacctg |
2620329 |
T |
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