View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14121_low_3 (Length: 714)

Name: NF14121_low_3
Description: NF14121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14121_low_3
NF14121_low_3
[»] chr4 (57 HSPs)
chr4 (19-701)||(7969903-7970587)
chr4 (126-190)||(44719398-44719462)
chr4 (126-190)||(47372832-47372896)
chr4 (42-125)||(2234212-2234295)
chr4 (38-87)||(3712519-3712568)
chr4 (38-101)||(35723394-35723458)
chr4 (130-190)||(37042701-37042761)
chr4 (126-189)||(7681948-7682011)
chr4 (28-110)||(15029743-15029824)
chr4 (24-78)||(35952613-35952667)
chr4 (125-190)||(8598978-8599043)
chr4 (19-124)||(12895107-12895211)
chr4 (43-107)||(21945483-21945547)
chr4 (126-190)||(29209212-29209276)
chr4 (126-190)||(41192242-41192306)
chr4 (43-110)||(14465090-14465157)
chr4 (38-101)||(36635310-36635373)
chr4 (126-193)||(38903752-38903819)
chr4 (126-193)||(42639054-42639121)
chr4 (41-87)||(8423731-8423777)
chr4 (24-78)||(15659756-15659810)
chr4 (40-102)||(21539879-21539941)
chr4 (26-123)||(30298910-30299008)
chr4 (26-123)||(30327778-30327876)
chr4 (38-96)||(40613441-40613499)
chr4 (126-218)||(2557680-2557773)
chr4 (24-77)||(18576033-18576086)
chr4 (38-87)||(22440610-22440659)
chr4 (40-101)||(37698698-37698759)
chr4 (42-87)||(56257933-56257978)
chr4 (38-78)||(903931-903971)
chr4 (38-78)||(44081587-44081627)
chr4 (38-86)||(44796972-44797020)
chr4 (39-78)||(7214533-7214572)
chr4 (38-73)||(8402752-8402787)
chr4 (24-107)||(19482648-19482731)
chr4 (141-192)||(20105553-20105604)
chr4 (126-189)||(25575005-25575068)
chr4 (40-87)||(46715486-46715533)
chr4 (126-193)||(54470388-54470455)
chr4 (38-101)||(56488520-56488583)
chr4 (24-78)||(5775354-5775408)
chr4 (41-95)||(6273936-6273990)
chr4 (29-79)||(9996848-9996898)
chr4 (126-188)||(31403073-31403135)
chr4 (126-188)||(32339740-32339802)
chr4 (29-83)||(33950140-33950194)
chr4 (128-190)||(40018226-40018288)
chr4 (24-78)||(40742600-40742654)
chr4 (28-78)||(49659523-49659573)
chr4 (126-180)||(55029002-55029056)
chr4 (38-87)||(999358-999407)
chr4 (38-107)||(13783261-13783330)
chr4 (38-87)||(18513251-18513300)
chr4 (41-78)||(19230322-19230359)
chr4 (24-85)||(30982874-30982935)
chr4 (152-189)||(48174131-48174168)
[»] chr1 (74 HSPs)
chr1 (22-126)||(6427312-6427415)
chr1 (23-107)||(7918206-7918290)
chr1 (41-109)||(36878439-36878507)
chr1 (28-107)||(8842714-8842793)
chr1 (28-107)||(9709800-9709879)
chr1 (129-188)||(17815663-17815722)
chr1 (43-124)||(46348398-46348479)
chr1 (28-125)||(52903211-52903308)
chr1 (19-107)||(1486700-1486788)
chr1 (126-190)||(38869063-38869127)
chr1 (126-189)||(7124322-7124385)
chr1 (24-87)||(38503320-38503383)
chr1 (26-120)||(18556454-18556548)
chr1 (24-125)||(25361851-25361949)
chr1 (126-188)||(40920568-40920630)
chr1 (24-77)||(44482240-44482293)
chr1 (39-107)||(5898277-5898345)
chr1 (43-107)||(5927355-5927419)
chr1 (126-190)||(6025786-6025850)
chr1 (19-87)||(20157341-20157409)
chr1 (25-89)||(34371712-34371775)
chr1 (47-106)||(2896140-2896199)
chr1 (24-87)||(9629896-9629959)
chr1 (38-101)||(17831541-17831604)
chr1 (28-127)||(29163381-29163479)
chr1 (28-87)||(40181871-40181930)
chr1 (29-107)||(16927186-16927264)
chr1 (28-90)||(22781439-22781501)
chr1 (29-107)||(27471567-27471645)
chr1 (43-101)||(28273103-28273161)
chr1 (25-98)||(48148034-48148108)
chr1 (61-110)||(9690305-9690354)
chr1 (38-87)||(17425103-17425152)
chr1 (55-124)||(23653318-23653386)
chr1 (38-87)||(25098565-25098614)
chr1 (38-95)||(30847730-30847787)
chr1 (38-78)||(1864890-1864930)
chr1 (22-86)||(36905998-36906062)
chr1 (126-190)||(38877380-38877444)
chr1 (126-190)||(42501289-42501353)
chr1 (24-107)||(5376496-5376579)
chr1 (24-87)||(9828044-9828107)
chr1 (25-100)||(10572586-10572661)
chr1 (28-87)||(13436458-13436517)
chr1 (151-190)||(14225873-14225912)
chr1 (28-95)||(14332642-14332709)
chr1 (126-193)||(15577599-15577666)
chr1 (40-107)||(15641042-15641109)
chr1 (38-77)||(19324572-19324611)
chr1 (29-100)||(19562622-19562693)
chr1 (150-193)||(30396763-30396806)
chr1 (43-110)||(38078676-38078743)
chr1 (39-106)||(41510895-41510962)
chr1 (142-193)||(50257767-50257818)
chr1 (27-77)||(2283676-2283726)
chr1 (24-107)||(5944261-5944346)
chr1 (126-168)||(13827639-13827681)
chr1 (29-107)||(23636050-23636128)
chr1 (126-184)||(25460162-25460220)
chr1 (19-57)||(31511971-31512009)
chr1 (41-87)||(34298436-34298482)
chr1 (39-101)||(41500717-41500779)
chr1 (24-97)||(113289-113362)
chr1 (43-100)||(1262871-1262928)
chr1 (29-110)||(6415002-6415083)
chr1 (137-190)||(10569108-10569161)
chr1 (38-87)||(12443470-12443519)
chr1 (38-103)||(13997867-13997932)
chr1 (24-86)||(19909298-19909364)
chr1 (24-101)||(24577182-24577259)
chr1 (42-107)||(25452162-25452227)
chr1 (126-187)||(30017092-30017153)
chr1 (41-78)||(40747786-40747823)
chr1 (29-78)||(41017405-41017454)
[»] chr6 (61 HSPs)
chr6 (126-190)||(32945429-32945493)
chr6 (28-96)||(9629374-9629442)
chr6 (39-101)||(7996389-7996451)
chr6 (39-101)||(8022350-8022412)
chr6 (19-107)||(9027158-9027246)
chr6 (126-188)||(1747984-1748046)
chr6 (28-110)||(20371110-20371192)
chr6 (28-101)||(7265593-7265666)
chr6 (19-87)||(9025485-9025553)
chr6 (38-98)||(19040341-19040401)
chr6 (38-86)||(30866154-30866202)
chr6 (28-87)||(7377979-7378038)
chr6 (27-78)||(9617443-9617494)
chr6 (40-107)||(9658859-9658926)
chr6 (24-99)||(32320665-32320740)
chr6 (24-107)||(34073343-34073426)
chr6 (24-106)||(677818-677900)
chr6 (25-107)||(3398599-3398680)
chr6 (25-107)||(10294087-10294169)
chr6 (43-125)||(17841604-17841686)
chr6 (24-101)||(7723246-7723323)
chr6 (19-107)||(7086775-7086863)
chr6 (29-76)||(13360373-13360420)
chr6 (43-125)||(17302518-17302601)
chr6 (38-96)||(13364715-13364773)
chr6 (40-78)||(26314646-26314684)
chr6 (30-75)||(97819-97864)
chr6 (40-89)||(5462684-5462733)
chr6 (28-101)||(5732510-5732583)
chr6 (38-107)||(13851716-13851785)
chr6 (24-101)||(16766683-16766760)
chr6 (19-107)||(20518325-20518414)
chr6 (29-78)||(33419182-33419231)
chr6 (126-190)||(6293429-6293493)
chr6 (26-78)||(7151421-7151473)
chr6 (41-101)||(7938102-7938162)
chr6 (24-100)||(26562676-26562752)
chr6 (28-96)||(33001289-33001357)
chr6 (126-189)||(34543-34606)
chr6 (38-100)||(10339135-10339198)
chr6 (19-78)||(10770665-10770724)
chr6 (38-125)||(10842494-10842581)
chr6 (24-67)||(11424707-11424750)
chr6 (22-101)||(19044450-19044529)
chr6 (28-87)||(21924935-21924994)
chr6 (126-169)||(35199681-35199723)
chr6 (19-77)||(9024167-9024225)
chr6 (24-78)||(13815451-13815505)
chr6 (24-78)||(15443704-15443758)
chr6 (22-107)||(34290073-34290156)
chr6 (137-190)||(413275-413328)
chr6 (45-78)||(6299521-6299554)
chr6 (45-78)||(6306331-6306364)
chr6 (41-78)||(8389485-8389522)
chr6 (25-78)||(9195751-9195804)
chr6 (38-75)||(11591880-11591917)
chr6 (29-98)||(32298608-32298677)
chr6 (41-78)||(32299284-32299321)
chr6 (42-107)||(32839660-32839725)
chr6 (29-78)||(33340946-33340995)
chr6 (29-78)||(35125103-35125152)
[»] chr5 (56 HSPs)
chr5 (22-101)||(3966489-3966568)
chr5 (38-108)||(27144442-27144512)
chr5 (38-96)||(32630745-32630803)
chr5 (19-109)||(39205858-39205948)
chr5 (24-125)||(6035445-6035545)
chr5 (25-89)||(6471886-6471950)
chr5 (24-87)||(32766939-32767002)
chr5 (27-101)||(11685925-11685999)
chr5 (19-105)||(38749554-38749640)
chr5 (43-125)||(43001762-43001844)
chr5 (28-101)||(26312755-26312828)
chr5 (126-190)||(4026365-4026429)
chr5 (126-190)||(18350939-18351003)
chr5 (24-100)||(18592060-18592136)
chr5 (43-107)||(21191071-21191135)
chr5 (38-78)||(23012418-23012458)
chr5 (19-110)||(2436900-2436990)
chr5 (46-129)||(9449427-9449510)
chr5 (28-107)||(16203795-16203874)
chr5 (24-107)||(22423808-22423891)
chr5 (43-110)||(31084301-31084367)
chr5 (43-125)||(14674231-14674313)
chr5 (28-86)||(30502388-30502446)
chr5 (28-86)||(30542731-30542789)
chr5 (41-78)||(30098335-30098372)
chr5 (25-86)||(36838544-36838605)
chr5 (152-197)||(38657050-38657095)
chr5 (130-190)||(2645175-2645235)
chr5 (126-190)||(12576897-12576961)
chr5 (40-104)||(12927637-12927701)
chr5 (27-87)||(28296328-28296388)
chr5 (28-96)||(28588674-28588742)
chr5 (23-87)||(41091252-41091316)
chr5 (43-107)||(41995451-41995515)
chr5 (142-193)||(683735-683786)
chr5 (38-101)||(12264839-12264902)
chr5 (29-76)||(15086482-15086529)
chr5 (43-78)||(15405070-15405105)
chr5 (38-101)||(19737492-19737555)
chr5 (155-218)||(29922494-29922557)
chr5 (38-85)||(34879352-34879399)
chr5 (35-77)||(10022642-10022684)
chr5 (128-190)||(15588427-15588489)
chr5 (22-84)||(17593716-17593778)
chr5 (28-78)||(17925172-17925222)
chr5 (38-76)||(24273040-24273078)
chr5 (38-76)||(24389136-24389174)
chr5 (53-107)||(26716124-26716178)
chr5 (53-107)||(26985864-26985918)
chr5 (25-125)||(16734828-16734930)
chr5 (41-78)||(25863213-25863250)
chr5 (126-187)||(27998622-27998683)
chr5 (150-187)||(36123222-36123259)
chr5 (152-193)||(41894280-41894321)
chr5 (28-69)||(42029770-42029811)
chr5 (38-107)||(42488063-42488132)
[»] chr7 (55 HSPs)
chr7 (38-107)||(3520352-3520421)
chr7 (25-124)||(25791616-25791714)
chr7 (24-125)||(32308082-32308183)
chr7 (129-188)||(6807388-6807447)
chr7 (15-125)||(21138983-21139090)
chr7 (24-107)||(22602706-22602789)
chr7 (126-190)||(22174181-22174245)
chr7 (24-107)||(5235966-5236049)
chr7 (24-107)||(15902802-15902885)
chr7 (28-107)||(20549771-20549850)
chr7 (38-101)||(42720900-42720963)
chr7 (43-125)||(7197312-7197394)
chr7 (19-92)||(5548671-5548744)
chr7 (25-78)||(35297669-35297722)
chr7 (42-125)||(11700768-11700848)
chr7 (24-76)||(17307904-17307956)
chr7 (38-106)||(22868023-22868091)
chr7 (23-107)||(27945021-27945105)
chr7 (24-107)||(26329378-26329461)
chr7 (29-87)||(19206050-19206108)
chr7 (152-218)||(21078124-21078190)
chr7 (29-107)||(22484005-22484083)
chr7 (37-87)||(29787378-29787428)
chr7 (25-102)||(6630909-6630986)
chr7 (43-100)||(7438693-7438750)
chr7 (24-89)||(8160414-8160479)
chr7 (36-101)||(23191882-23191947)
chr7 (38-95)||(38134416-38134473)
chr7 (29-78)||(38143232-38143281)
chr7 (41-101)||(1401011-1401071)
chr7 (19-107)||(1433434-1433522)
chr7 (19-87)||(33384573-33384641)
chr7 (19-78)||(5233638-5233697)
chr7 (19-90)||(7758319-7758390)
chr7 (52-107)||(11722122-11722177)
chr7 (19-78)||(11890910-11890969)
chr7 (19-78)||(16341505-16341564)
chr7 (24-107)||(18013070-18013153)
chr7 (44-87)||(30731037-30731080)
chr7 (24-78)||(3142074-3142128)
chr7 (127-193)||(3629557-3629623)
chr7 (19-101)||(5409827-5409909)
chr7 (24-78)||(7058435-7058489)
chr7 (24-78)||(7328687-7328741)
chr7 (38-84)||(17851434-17851480)
chr7 (25-95)||(23128658-23128728)
chr7 (45-79)||(30516374-30516408)
chr7 (28-102)||(46332919-46332993)
chr7 (29-102)||(5835232-5835305)
chr7 (28-77)||(9482944-9482993)
chr7 (42-134)||(14729656-14729746)
chr7 (38-79)||(19930951-19930992)
chr7 (29-78)||(24146825-24146874)
chr7 (24-101)||(24339628-24339705)
chr7 (151-188)||(39812144-39812181)
[»] chr3 (47 HSPs)
chr3 (126-185)||(55244459-55244518)
chr3 (19-107)||(25948878-25948966)
chr3 (28-107)||(8383237-8383316)
chr3 (24-86)||(8039831-8039893)
chr3 (125-200)||(41842550-41842625)
chr3 (41-107)||(34307793-34307859)
chr3 (42-107)||(5441045-5441110)
chr3 (39-88)||(9624640-9624689)
chr3 (39-100)||(15812832-15812893)
chr3 (40-101)||(29112292-29112353)
chr3 (22-78)||(16789021-16789077)
chr3 (126-190)||(42026573-42026637)
chr3 (28-87)||(7928450-7928509)
chr3 (126-193)||(11284169-11284236)
chr3 (24-87)||(11313796-11313859)
chr3 (24-87)||(16192746-16192809)
chr3 (25-107)||(10455770-10455852)
chr3 (28-78)||(21419455-21419505)
chr3 (32-78)||(23184076-23184122)
chr3 (38-96)||(32804550-32804608)
chr3 (126-188)||(46140588-46140650)
chr3 (29-78)||(40150572-40150621)
chr3 (61-121)||(6525713-6525773)
chr3 (38-78)||(29508453-29508493)
chr3 (126-194)||(41971303-41971371)
chr3 (40-107)||(4469830-4469897)
chr3 (40-87)||(10690274-10690321)
chr3 (24-107)||(14829670-14829752)
chr3 (25-76)||(15314873-15314924)
chr3 (126-189)||(29601073-29601136)
chr3 (38-101)||(49505164-49505227)
chr3 (24-95)||(49651782-49651853)
chr3 (126-189)||(49841797-49841860)
chr3 (41-87)||(5407260-5407306)
chr3 (41-87)||(23870572-23870618)
chr3 (21-67)||(47775745-47775791)
chr3 (28-78)||(48353731-48353781)
chr3 (28-77)||(8789550-8789599)
chr3 (38-87)||(12704007-12704056)
chr3 (28-69)||(13414487-13414528)
chr3 (41-78)||(17005632-17005669)
chr3 (44-109)||(21720742-21720807)
chr3 (24-125)||(22774066-22774167)
chr3 (44-77)||(27764716-27764749)
chr3 (69-110)||(33359738-33359779)
chr3 (28-69)||(35222956-35222997)
chr3 (150-187)||(39535440-39535477)
[»] chr2 (46 HSPs)
chr2 (38-107)||(37411254-37411323)
chr2 (43-125)||(37558939-37559021)
chr2 (38-107)||(21616742-21616811)
chr2 (126-190)||(8197578-8197642)
chr2 (126-190)||(8202338-8202402)
chr2 (25-89)||(44860318-44860382)
chr2 (29-104)||(18276504-18276579)
chr2 (126-189)||(37470171-37470234)
chr2 (126-192)||(26784375-26784441)
chr2 (42-107)||(21782832-21782897)
chr2 (38-107)||(23718006-23718075)
chr2 (38-107)||(24105678-24105747)
chr2 (28-84)||(34691805-34691861)
chr2 (28-84)||(34714217-34714273)
chr2 (138-189)||(16626002-16626053)
chr2 (24-87)||(24975321-24975384)
chr2 (126-192)||(19336928-19336994)
chr2 (37-87)||(28677909-28677959)
chr2 (24-78)||(30527591-30527645)
chr2 (126-188)||(32402681-32402743)
chr2 (42-107)||(16069268-16069333)
chr2 (141-193)||(6219161-6219213)
chr2 (125-193)||(9496046-9496114)
chr2 (43-107)||(12940950-12941014)
chr2 (126-194)||(19235017-19235085)
chr2 (43-107)||(20473302-20473366)
chr2 (47-87)||(27084262-27084302)
chr2 (126-194)||(33287602-33287670)
chr2 (24-72)||(35056883-35056931)
chr2 (42-105)||(4332908-4332971)
chr2 (23-78)||(18622615-18622670)
chr2 (38-101)||(31808063-31808126)
chr2 (38-100)||(896198-896260)
chr2 (28-78)||(5367201-5367251)
chr2 (24-78)||(18420430-18420484)
chr2 (44-78)||(22084848-22084882)
chr2 (38-83)||(22556964-22557010)
chr2 (45-107)||(23354669-23354731)
chr2 (42-87)||(1327978-1328023)
chr2 (137-190)||(8187299-8187352)
chr2 (26-107)||(20539672-20539753)
chr2 (54-107)||(23355021-23355074)
chr2 (138-187)||(29159286-29159335)
chr2 (24-101)||(29970545-29970622)
chr2 (22-79)||(33861935-33861992)
chr2 (38-107)||(35449493-35449562)
[»] scaffold0022 (2 HSPs)
scaffold0022 (23-101)||(99879-99957)
scaffold0022 (40-107)||(90823-90890)
[»] chr8 (41 HSPs)
chr8 (29-87)||(12606830-12606888)
chr8 (38-107)||(24362212-24362281)
chr8 (22-87)||(21465412-21465477)
chr8 (38-87)||(31236587-31236636)
chr8 (38-87)||(34897085-34897134)
chr8 (42-107)||(37283824-37283889)
chr8 (126-190)||(23492215-23492279)
chr8 (43-107)||(24669413-24669477)
chr8 (23-107)||(25172693-25172777)
chr8 (24-87)||(14634137-14634200)
chr8 (41-104)||(20679408-20679471)
chr8 (24-107)||(22651956-22652039)
chr8 (38-125)||(31109528-31109615)
chr8 (38-101)||(39954289-39954352)
chr8 (126-184)||(11733928-11733986)
chr8 (128-190)||(12611680-12611742)
chr8 (43-125)||(36450769-36450851)
chr8 (38-87)||(4611534-4611583)
chr8 (28-101)||(4786338-4786411)
chr8 (25-78)||(11803268-11803321)
chr8 (25-78)||(11927083-11927136)
chr8 (29-78)||(12559107-12559156)
chr8 (28-101)||(13844596-13844669)
chr8 (40-125)||(14134661-14134746)
chr8 (126-170)||(3638390-3638434)
chr8 (43-107)||(4673440-4673504)
chr8 (38-86)||(20785475-20785523)
chr8 (42-78)||(24017452-24017488)
chr8 (38-78)||(34201056-34201096)
chr8 (27-87)||(36934670-36934730)
chr8 (126-190)||(39967536-39967600)
chr8 (31-78)||(3508061-3508108)
chr8 (126-189)||(30748644-30748707)
chr8 (40-78)||(12985401-12985439)
chr8 (41-78)||(3025560-3025597)
chr8 (25-78)||(11944674-11944727)
chr8 (38-87)||(14731712-14731761)
chr8 (51-88)||(18069154-18069191)
chr8 (151-188)||(26642708-26642745)
chr8 (38-87)||(27213547-27213596)
chr8 (22-107)||(28384988-28385073)
[»] scaffold0123 (1 HSPs)
scaffold0123 (24-95)||(44521-44592)
[»] scaffold0110 (1 HSPs)
scaffold0110 (18-100)||(28837-28919)
[»] scaffold0044 (1 HSPs)
scaffold0044 (24-97)||(53170-53243)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-107)||(135303-135391)
[»] scaffold0168 (1 HSPs)
scaffold0168 (24-107)||(21023-21106)
[»] scaffold0036 (1 HSPs)
scaffold0036 (25-100)||(9744-9819)
[»] scaffold0180 (1 HSPs)
scaffold0180 (126-188)||(25482-25544)
[»] scaffold0004 (1 HSPs)
scaffold0004 (43-101)||(92793-92851)
[»] scaffold0085 (1 HSPs)
scaffold0085 (38-107)||(26373-26442)
[»] scaffold0011 (1 HSPs)
scaffold0011 (29-78)||(240022-240071)
[»] scaffold0392 (1 HSPs)
scaffold0392 (137-193)||(6806-6862)
[»] scaffold1449 (1 HSPs)
scaffold1449 (24-67)||(1262-1305)
[»] scaffold0008 (1 HSPs)
scaffold0008 (24-107)||(263368-263451)
[»] scaffold0287 (1 HSPs)
scaffold0287 (127-193)||(16462-16528)
[»] scaffold0037 (1 HSPs)
scaffold0037 (44-78)||(102914-102948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (41-107)||(225281-225347)


Alignment Details
Target: chr4 (Bit Score: 570; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 19 - 701
Target Start/End: Complemental strand, 7970587 - 7969903
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgc 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  7970587 tgtctgacacgacaccaaaacatataattacactgaattatatgattttctca--ttattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgc 7970490  T
Q  119 ttcatagttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaacttcatttgattggataagccttggt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  7970489 ttcatagttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaactccatttgattggataagccgtggt 7970390  T
Q  219 cagttggttgttgtcgggagaagggtctgtatttagtctataaaagtacttggaacatgattacctccaaaggaagaaacctacgaaaactcaataaaaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  7970389 cagttggttgttgtcgggagaagggtctgtatttagtctataaaagtatttggaacatgattacctccgagggaagaaacctacgaaaactcaataaaaa 7970290  T
Q  319 ttataggatattggataatataggttttag---------acaaaaaagctatattatattgtgctttgagtttactttattccttgttgaattatggtaa 409  Q
    ||||||||||||||||||||||| ||||||         | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7970289 ttataggatattggataatatagcttttagaaagaaaaaaaaaaaaagctatattatattgtgctttgagtttactttattccttgttgaattatggtaa 7970190  T
Q  410 cagattttatgt--catactatggttattataatttataagggcttaattaagttgttttgctatgtgtttcgatacagtgggaagaagcctgaatatct 507  Q
    ||||||||||||   ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7970189 cagattttatgtgatatactatggtta-------ttataagggcttaattaagttgttttgctatgtgtttcgatacagtgggaagaagcctgaatatct 7970097  T
Q  508 tggagttcagaaaaactcatcagcattggctctgtgtccagcaactaagaattgtgtatcaacctccgagaatgtcaatgatctcacccattatgctcct 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7970096 tggagttcagaaaaactcatcagcattggctctgtgtccagcaactaagaattgtgtatcaacctctgagaatgtcaatgatctcacccattatgctcct 7969997  T
Q  608 ccttggtaaagtttccttctttttcttcagtggattttagccttagttttctgaaactatatgaattatctacaatttctgtttttcatttcag 701  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7969996 ccttggtaaagtttccttctttttcttcagcggattttagccttagttttctgaaactatatgaattatctacaatttctgtttttcatttcag 7969903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 44719462 - 44719398
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||||||||||||||  |||||| ||| | |||||||||||||||||||||||||||||    
T  44719462 ttaatgagttagatagaaatacggtatataatagagcattatggtgtcgtttgatccatgtagcc 44719398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 47372832 - 47372896
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||    
T  47372832 ttaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgatccatgtagcc 47372896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 2234295 - 2234212
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||||||||||||| |||||||||||||||||   ||||| |||| ||||||| |||||||||| || | ||||||||||    
T  2234295 ataattacattgaattatgtgattttctcaaattatcaacggtgacagcgtgtcagtatctgtgtccgtatatctgcttcatag 2234212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 3712519 - 3712568
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  3712519 acatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 35723394 - 35723458
Alignment:
Q  38 acatataattacattgaattatatg-attttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||| || ||||||||||    
T  35723394 acatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 37042761 - 37042701
Alignment:
Q  130 tgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||| ||||||||||  |||| ||||| |||||||||||||||||||||||||||||||    
T  37042761 tgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagcc 37042701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 7682011 - 7681948
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |  ||||||||||||||||||    
T  7682011 ttaatgagttagatagaaatatggtatatgataggacattattgcatcgtttgatccatgtagc 7681948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 15029824 - 15029743
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    ||||||||| ||||||||||||| |||||||| |||| || |||||||||| || ||||| || |||||||||| ||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc-gtgtccgg 15029743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 35952613 - 35952667
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||  | |||||||||||||||||||||||||||||| ||||||||||    
T  35952613 gacacgacactgatacatataattacattgaattatatgattttatcaaattatt 35952667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 8599043 - 8598978
Alignment:
Q  125 gttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||||||| |||||||  |||| ||||| |||||||||| |||||||||| |||||||||    
T  8599043 gttaatgagttagaaagaaataaggtatttgatagaacattatggcgtcgtttgattcatgtagcc 8598978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 12895107 - 12895211
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgc 118  Q
    |||| ||||||||||| | || | ||||||| ||||||||| ||||||| |||||||||| || || || || |||| ||||| ||||||| ||||||||    
T  12895107 tgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtccgtatctgtgc 12895205  T
Q  119 ttcata 124  Q
    ||||||    
T  12895206 ttcata 12895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 21945547 - 21945483
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||||||| | ||||| |||||||||| || ||||| |||||||||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 29209276 - 29209212
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||||||||||| |||||||||| | |||||||| || |||||||| ||||||||    
T  29209276 ttaatgagttggatagaaatatggtatatgatagagcattatggcgttgtttgatcaatgtagcc 29209212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 41192242 - 41192306
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||||||||||| ||||||| || ||||||||||  ||||| |||||||||||||    
T  41192242 ttaatgagttggatagaaatatggtatatggtagaacattatggcttcgttcgatccatgtagcc 41192306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 14465090 - 14465157
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    ||||||||||||||||| ||||||| |||||||||| |  |||| ||  |||||||||||||||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtccgg 14465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 36635373 - 36635310
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||| |||||||| |||||||||||||||||| | |||||  || ||||||||||    
T  36635373 acatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtc 36635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 38903819 - 38903752
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||||||| |||||| ||||  ||||||| | ||||||||||  ||||||||||||||||||||||    
T  38903819 ttaatgagtttgatagagatatgatatatgacataacattatggcatcgtttgatccatgtagccaac 38903752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 42639121 - 42639054
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||| ||||| | || ||||||||||||    
T  42639121 ttaatgagttggatagaaatatggtatttgatagaacattatggcgtcgtgtaattcatgtagccaac 42639054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 8423731 - 8423777
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 15659756 - 15659810
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||| |||||||||||||  |||||||  |||||||||||||||||    
T  15659756 gacacgacaccaacacatataattacaccgaattatgagattttctcaaattatt 15659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 21539879 - 21539941
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 102  Q
    ||||||||||| | |||||||||||||||| ||||||||   |||||| ||||||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtct 21539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 30299008 - 30298910
Alignment:
Q  26 cacgacaccaaaacatataattacattgaattatatgattttct-caaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcat 123  Q
    ||||||||| | || | |||||||| |||||||| | ||||| | ||||||||| || ||||| || |||||||||| ||||||| |||||||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 30327876 - 30327778
Alignment:
Q  26 cacgacaccaaaacatataattacattgaattatatgattttct-caaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcat 123  Q
    ||||||||| | || | |||||||| |||||||| | ||||| | ||||||||| || ||||| || |||||||||| ||||||| |||||||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtgcttcat 30327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 40613499 - 40613441
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    ||||||||||||| |||||||| ||||||||||||| |||| |||||||| || |||||    
T  40613499 acatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 2557773 - 2557680
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattat-ggtgtcgtttgatccatgtagccaacttcatttgattggataagccttggt 218  Q
    |||| ||||| ||| ||||||| || ||||||| |||||||| |||||  |||||||||||||||||||| |||||  | ||||||| ||||||    
T  2557773 ttaacgagttggatcgaaatatggtttatgatagaacattattggtgtaatttgatccatgtagccaactccatttagtgggataaggcttggt 2557680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 18576033 - 18576086
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 77  Q
    |||| |||||||| |||||||||||||  ||||||| |||||||||||||||||    
T  18576033 gacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 22440610 - 22440659
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| |||||||| ||||||||||||||||||  |||||||    
T  22440610 acatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 37698759 - 37698698
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||| |||||||||| |||||||||||||||| | | |||||| ||| |||||||    
T  37698759 atataattacactgaattatataattttctcaaattattagagatgtcagtatgccagtgtc 37698698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 903971 - 903931
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatt 903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 44081587 - 44081627
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  44081587 acatataattacattaaattatatgattttttcaaattatt 44081627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 44796972 - 44797020
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    |||| ||||||||||||||||| | ||||||||||||||||| ||||||    
T  44796972 acatgtaattacattgaattatgttattttctcaaattattgtcggtgt 44797020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 7214533 - 7214572
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  7214533 catataattacattaaattatgtgattttctcaaattatt 7214572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 73
Target Start/End: Original strand, 8402752 - 8402787
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaa 73  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8402752 acatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 19482731 - 19482648
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| || | ||||||||  ||||||| |||| || |||||||||| |  ||||| || ||||||||||||||||    
T  19482731 gacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 20105604 - 20105553
Alignment:
Q  141 gaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaa 192  Q
    ||||||| ||||||||||  ||||||||| ||| ||||||||||||||||||    
T  20105604 gaaatatggtatatgataggacattatggcgtcatttgatccatgtagccaa 20105553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 25575005 - 25575068
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| ||| ||||||| || ||||||| |||||| ||||||  |||||||||||||||    
T  25575005 ttaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagc 25575068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 46715486 - 46715533
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||| ||||||||||||| ||||| ||||||||||||| |||||||    
T  46715486 atataactacattgaattatgtgattgtctcaaattattgtcggtgtc 46715533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 54470388 - 54470455
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||||||| ||||||||||| ||||||||   | |||||| | ||| |||||||||||||||||||    
T  54470388 ttaatgagttggatagaaatatggtatatgactgagcattattgcgtcatttgatccatgtagccaac 54470455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 56488520 - 56488583
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||| |||||  |||||||||||||||||||||||| || ||||||||| | |||| |||||    
T  56488520 acatatgattaccctgaattatatgattttctcaaattgttagcggtgtcaacgtgtcggtgtc 56488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 5775354 - 5775408
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||| |||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  5775354 gacatgacaccgacacatataattacacttaattatgtgattttctcaaattatt 5775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 6273990 - 6273936
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    |||||||||| | |||||||| ||||||||||||||||| | |||||||| ||||    
T  6273990 tataattacactaaattatatcattttctcaaattattgtctgtgtcagcgtgtc 6273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 9996898 - 9996848
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattg 79  Q
    |||||| | ||||||||||| | |||||||| |||||||||||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattattg 9996848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 31403135 - 31403073
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    ||||| |||| ||||||||| | |||||||||| | ||||||||||| | |||||||||||||    
T  31403135 ttaattagttggatagaaatgtggtatatgatagagcattatggtgttgcttgatccatgtag 31403073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 32339740 - 32339802
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||| ||||| |||||| ||||  ||||||||| || ||||||| ||||||||||||||||||    
T  32339740 ttaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtag 32339802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 33950194 - 33950140
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcgg 83  Q
    |||||| | |||||| |||||||| |||||| |||||||||||||||||| ||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagcgg 33950140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 40018288 - 40018226
Alignment:
Q  128 aatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||| |||||  ||||  ||||||||| ||||||| || ||||||||||||||||||||    
T  40018288 aatgagttggatagggatatgatatatgatagaacattacggcgtcgtttgatccatgtagcc 40018226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 40742654 - 40742600
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||| | | ||||||||||||| |  ||||||||||||||||||||||||    
T  40742654 gacacgacatcgacacatataattacactagattatatgattttctcaaattatt 40742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 49659523 - 49659573
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||| ||| |||||| | |||||||| ||||||||||||||||    
T  49659523 cgacaccaaaacctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 55029002 - 55029056
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgat 180  Q
    |||||||| |||||||||||||  ||||||||| |||||||||| ||| ||||||    
T  55029002 ttaatgagctagatagaaatatgttatatgatagaacattatggcgtcatttgat 55029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 999358 - 999407
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| | ||||||||||||| ||||||||||| ||| ||||    
T  999358 acatataattacactaaattatatgatttactcaaattattagcgatgtc 999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 13783330 - 13783261
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||| | |||| ||||||||| ||| |||||||| |  |||||||||| |||||    
T  13783330 acatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 18513251 - 18513300
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||| ||||||||||||||| | ||||||||||||||||  |||||||    
T  18513251 acatatgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 19230322 - 19230359
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  19230322 tataattacattgaattatgttattttctcaaattatt 19230359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 30982874 - 30982935
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtg 85  Q
    ||||||||||| | || |||||||||| |||| ||| |||||||||||||| ||| ||||||    
T  30982874 gacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 48174168 - 48174131
Alignment:
Q  152 tatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  48174168 tatgataaaacattatggcgtcatttgatccatgtagc 48174131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 6427415 - 6427312
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttc 121  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||  || |||||||||| ||| |||  || |||||||    
T  6427415 ctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtg-ccgtgtccgtgcttc 6427317  T
Q  122 atagt 126  Q
    |||||    
T  6427316 atagt 6427312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 7918206 - 7918290
Alignment:
Q  23 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||||  | ||||||||||||| |||||||| |||||||||||||||||| | | ||||||| ||||| ||||||||||    
T  7918206 tgacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtc 7918290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 36878507 - 36878439
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 109  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||| ||||||    
T  36878507 tataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccg 36878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 8842714 - 8842793
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||| | | |||| | || ||||||||||||||||    
T  8842714 cgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtc 8842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 9709879 - 9709800
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| | |||||||||||||  ||||||| |||||||||||||||||| |||||||  ||||||||||||| |||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtc 9709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 17815663 - 17815722
Alignment:
Q  129 atgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    ||||||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||    
T  17815663 atgagttagatagaaatatggtatatgatagagcattttggtgtcgtttgatccatgtag 17815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 46348398 - 46348479
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcata 124  Q
    |||||||| | |||||||||||||| |||||||||| || ||||| || |||||||||| ||||||| ||| ||||||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcata 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 52903308 - 52903211
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    ||||||| | ||||||||||||| |||||||||||||||| | ||||||||  |||| || || ||| |||||| ||||| | |||||||||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtctgtatctgtgcttcatag 52903211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 1486700 - 1486788
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||| ||||||||||| | || |||||||||| |||||||| ||||||| |||||||||| || |||||||| ||||||| || |||||    
T  1486700 tgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 38869063 - 38869127
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||| ||| |||||| |||| |||||||||| |||||||||| ||||||||||||||||||||    
T  38869063 ttaatgggttggatagatatatggtatatgatagaacattatggcgtcgtttgatccatgtagcc 38869127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 7124322 - 7124385
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    ||||||| || ||||||||||| ||||| |||| | ||||||||||||||||||||||||||||    
T  7124322 ttaatgaattggatagaaatatggtataggatagagcattatggtgtcgtttgatccatgtagc 7124385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 38503383 - 38503320
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||| |||||| | ||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  38503383 gacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtc 38503320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 18556454 - 18556548
Alignment:
Q  26 cacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgctt 120  Q
    ||||||||||| || | |||||||||| |||||| |||| || |||||||||| || ||||| || |||||||||| ||||||| ||| ||||||    
T  18556454 cacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgctt 18556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 25361949 - 25361851
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcat 123  Q
    ||||||||||  | ||||||||||||| |||||||| |||||||||||||||||  | |||||| ||  ||| ||||| ||||||| |||||||||||||    
T  25361949 gacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggc--gtccgtgtc-gtgtccgaatctgtgcttcat 25361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 40920630 - 40920568
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||||| ||||||||||| |||||||||| || ||||||||||| |||||| |||||||    
T  40920630 ttaatgagttggatagaaatatggtatatgatagaatattatggtgtcttttgattcatgtag 40920568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 44482293 - 44482240
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 77  Q
    ||||||||||| | ||||||||||||| |||||||| |||||||||||||||||    
T  44482293 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 5898277 - 5898345
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||||| |||||||| ||||||| ||| |||||| |||||||| || | ||||||||||||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 5927355 - 5927419
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||| |||||||||||||| |||||||||| || |||| ||| |||||||||| |||||    
T  5927355 taattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 6025786 - 6025850
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||||||||||| |||| ||||| ||||| |||| ||| ||||||||||||||||    
T  6025786 ttaatgagttggatagaaatatggtatctgatagaacatgatggcgtcatttgatccatgtagcc 6025850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 20157341 - 20157409
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||| ||||||||||| | |||||| |||||| |||||||| ||||||||||| |||||| ||||||||    
T  20157341 tgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 34371775 - 34371712
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 89  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcag 34371712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 2896140 - 2896199
Alignment:
Q  47 tacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 106  Q
    |||| |||||||| |||||||||||||||||| |||||||| || |||||||||| ||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 9629896 - 9629959
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||| | || |||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  9629896 gacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtc 9629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 17831541 - 17831604
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||| |||||| ||||| || |||||||||||||||||| |||||||| || ||||||||||    
T  17831541 acatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 29163381 - 29163479
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatagtt 127  Q
    ||||||| | ||||||||||| |||||||||| ||||||||  ||||| || |||||||| || |||| |||| |||||||  ||| |||||||||||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgtgt-tgtgtccatatccgtgcttcatagtt 29163479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 40181930 - 40181871
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 16927186 - 16927264
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| | ||||||||||| |||||||||||||||| |||||||||| ||  || |  | ||||||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtc 16927264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 22781501 - 22781439
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagc 90  Q
    |||||||||  |||||||||| ||| |||||||||||||| | |||||||| |||||||||||    
T  22781501 cgacaccaatgcatataattatatttaattatatgattttataaaattattagcggtgtcagc 22781439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 27471567 - 27471645
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||| |||||||| |||||||| || ||||||||||||||| ||||| || |  ||||||||| ||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtc 27471645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 28273103 - 28273161
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||| |||||||||||||||| |||||| ||| |  |||||||||||||||||||    
T  28273103 taattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtc 28273161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 48148034 - 48148108
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatga-ttttctcaaattattggcggtgtcagcatgtcagt 98  Q
    |||||||||| | | ||||||||||| |||||||||||| |||| | |||||||| ||||||||| |||||||||    
T  48148034 acacgacaccgacatatataattacactgaattatatgatttttttaaaattattagcggtgtcaacatgtcagt 48148108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 9690305 - 9690354
Alignment:
Q  61 tgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    |||||||||||  ||||| ||||||||||| |||||||||||||||||||    
T  9690305 tgattttctcagtttattagcggtgtcagcgtgtcagtgtctgtgtccgg 9690354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 17425103 - 17425152
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||||||||||||||| ||||||| ||||||||||  |||||||    
T  17425103 acatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 23653386 - 23653318
Alignment:
Q  55 attatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcata 124  Q
    ||||| |||||||||||||||||| ||||||||| |||||| ||||| ||||| | ||| ||||||||||    
T  23653386 attatgtgattttctcaaattatttgcggtgtcatcatgtc-gtgtccgtgtctgtatccgtgcttcata 23653318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 25098565 - 25098614
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| |||||||| |||||||||||||||||  ||||||||    
T  25098565 acatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 30847730 - 30847787
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    |||||| ||||||||||||||| | ||||| |||||||||| || |||||||||||||    
T  30847730 acatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 1864890 - 1864930
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  1864890 acatataattacactgaattatgtgattttctcaaattatt 1864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 36906062 - 36905998
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    ||||||| || |||| ||||||||||||  |||||||| ||||||||||| |||||| |||||||    
T  36906062 ctgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 38877444 - 38877380
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||| ||||| |||||  |||||||||| |||| |||||||||| ||| ||||||||||||||||    
T  38877444 ttaacgagttggatagggatatagtatacgatagaacattatggcgtcatttgatccatgtagcc 38877380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 42501289 - 42501353
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||||||||||| | |||||||| |||||||  | ||||||| ||||||||||||    
T  42501289 ttaatgagttggatagaaatatggaatatgatagaacattacagcgtcgtttaatccatgtagcc 42501353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 5376496 - 5376579
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | || | |||||||| |||||||| | ||||||| |||||||| |||||||| || ||| |||||| |||||    
T  5376496 gacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtc 5376579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 9828107 - 9828044
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||| | ||||| ||||||| |||||||| ||||||| |||||||||| | ||||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtc 9828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 10572586 - 10572661
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||| ||||| | |||| ||||||||  ||||||| |||||||||||||||||| | |||||| || |||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 13436517 - 13436458
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||| ||||||||||||| |||||||| |||||| || |||||||| || |||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtc 13436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 14225912 - 14225873
Alignment:
Q  151 atatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  14225912 atatgatagaacagtatggtgtcgtttgatccatgtagcc 14225873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 14332642 - 14332709
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||| | |||||  |||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 15577599 - 15577666
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||||||| |||||| ||||  ||| ||||| |||||||| |||| |||||||||||||| |||||    
T  15577599 ttaatgagttggatagagatatgatatttgatagaacattattgtgttgtttgatccatgtacccaac 15577666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 15641042 - 15641109
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||| ||||| ||||| || ||||||||| |||||||| || ||||| ||||||||||||| |||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtc 15641109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 19324611 - 19324572
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattat 77  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  19324611 acatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 19562622 - 19562693
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||||| | ||||||||||||| |||| |||  ||||||||||||||||| || ||||| || |||||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgt 19562693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 30396806 - 30396763
Alignment:
Q  150 tatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||    
T  30396806 tatatgatagaacattatggtggcgtttgatccgtgtagccaac 30396763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 38078676 - 38078743
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    ||||||||||||||||| ||||||| |||||||||| || |||||  | |||||||||  ||||||||    
T  38078676 taattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccgg 38078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 41510895 - 41510962
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 106  Q
    ||||| |||||||| |||||||| ||||||| |||||| | | ||||||| |||||||||||| ||||    
T  41510895 catatgattacattcaattatatcattttcttaaattactagtggtgtcaacatgtcagtgtccgtgt 41510962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 50257767 - 50257818
Alignment:
Q  142 aaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||| || ||||||| |||||||||||||  |||||||||||||||||||    
T  50257767 aaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaac 50257818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 2283726 - 2283676
Alignment:
Q  27 acgacaccaaaacatataattacattgaattatatgattttctcaaattat 77  Q
    |||||||||| || |||||||||||||||| || ||||||| |||||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 5944346 - 5944261
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatga--ttttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | || |||||||||| |||||||| |||  |||| |||||||||| || ||| | || ||||||||||||||||    
T  5944346 gacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtc 5944261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 13827681 - 13827639
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatg 168  Q
    |||||||||| ||||||||||| |||||||||| |||||||||    
T  13827681 ttaatgagttggatagaaatatggtatatgatagaacattatg 13827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 23636050 - 23636128
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||| | ||||| ||||||| |||||||| | ||||||||||||| |||||||| || || ||||| |||| |||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtc 23636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 25460220 - 25460162
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccat 184  Q
    |||||||||| ||||||||||| |||||| ||| ||||| | ||||| |||||||||||    
T  25460220 ttaatgagtttgatagaaatatggtatataatagaacatcacggtgttgtttgatccat 25460162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 31511971 - 31512009
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaatt 57  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  31511971 tgtctgacaggacaccaacacatataattacattgaatt 31512009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 34298482 - 34298436
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| |||||||| |||||||||||||||||| | ||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtc 34298436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 41500717 - 41500779
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||| |||||||| |||||||| ||||||| |||||| | | ||||||| ||||||||||||    
T  41500717 catatgattacattcaattatatcattttcttaaattactagtggtgtcaacatgtcagtgtc 41500779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 113362 - 113289
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcag 97  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||||    
T  113362 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 1262928 - 1262871
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||||| |||||||||| |||||||||||||||||| || ||||| || |||| ||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgt 1262871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 6415002 - 6415083
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    |||||| | |||| |||||| | || ||||| |||||||||||||| ||| ||| |||| || |||||||||| ||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccgg 6415083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 10569161 - 10569108
Alignment:
Q  137 gatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    ||||||||||| |||||||||| ||||||||  | || ||||||||||||||||    
T  10569161 gatagaaatatcgtatatgatagaacattataatatcatttgatccatgtagcc 10569108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 12443470 - 12443519
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||| ||||||| |||||||| |||||||||||||||||| || |||||    
T  12443470 acatacaattacactgaattatgtgattttctcaaattattagctgtgtc 12443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 13997932 - 13997867
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctg 103  Q
    ||||||||||||| |||||||| ||||||| | |||| |||  ||||||| || ||||||||||||    
T  13997932 acatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtctg 13997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 19909364 - 19909298
Alignment:
Q  24 gacacgacaccaaaacatataattacat----tgaattatatgattttctcaaattattggcggtgt 86  Q
    |||||||||||||| ||||||||||| |    ||| |||| |||||||||||||||||| |||||||    
T  19909364 gacacgacaccaaagcatataattacctacactgagttatgtgattttctcaaattattagcggtgt 19909298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 24577182 - 24577259
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| |  |||||||| |||| |||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 25452162 - 25452227
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| ||||||||  ||||||||||||||||| || ||||  ||||||| |||||| ||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgtctttgtc 25452227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 30017153 - 30017092
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgta 187  Q
    ||||||||||||||||| |||   |||  || | ||||||||||||||||||||||||||||    
T  30017153 ttaatgagttagatagagataccatatccgacagaacattatggtgtcgtttgatccatgta 30017092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 40747786 - 40747823
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  40747786 tataattacattgaattatgtcattttctcaaattatt 40747823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 41017405 - 41017454
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| | ||||||||||||| |||||| | ||||||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatt 41017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 5e-21; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 32945429 - 32945493
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  32945429 ttaatgagttagatagaaatattttatatgatagaacattatggtgtcgtttgatccatgtagcc 32945493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 9629442 - 9629374
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 7996389 - 7996451
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  7996389 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 7996451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 8022412 - 8022350
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  8022412 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 8022350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 9027246 - 9027158
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||| ||||||||||| | |||||||||||||  ||||||| ||||| |||||||||||| |||||||| || |||||||||| |||||    
T  9027246 tgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 1748046 - 1747984
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||||||||||    
T  1748046 ttaatgagttggatagaaatatagtatatgatagaacattacgacgtcgtttgatccatgtag 1747984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 20371110 - 20371192
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    ||||||| | ||||||||| ||||||| |||| |||||||||||||||||| |||||||| || ||||| |||| ||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccgg 20371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 7265593 - 7265666
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||| | ||||||||||||| |||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 9025485 - 9025553
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||| ||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  9025485 tgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 19040401 - 19040341
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagt 98  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||| || |||||||    
T  19040401 acatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 30866154 - 30866202
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  30866154 acatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7378038 - 7377979
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 9617494 - 9617443
Alignment:
Q  27 acgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 9658926 - 9658859
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| |||||||| ||||||||| |||||||| |||||||| || |||||||||| |||||    
T  9658926 atataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9658859  T

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Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 32320665 - 32320740
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtg 99  Q
    ||||||||||| | ||||||||| |||||||||||| ||||||| ||||||||||  |||||||||| | ||||||    
T  32320665 gacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtg 32320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 34073343 - 34073426
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| |  |||||||||||| ||||||||  ||||||||||||||||| ||| |||  ||||||||||||| |||||    
T  34073343 gacacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtc 34073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 677900 - 677818
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 106  Q
    |||||||||||||  ||||||| |||| |  ||||||||||||||||||||||||  | ||||| || |||||||||||||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 3398680 - 3398599
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||| | || |||||||||| |||||||||||||||| |||||||||| || ||||| || |||||||||| |||||    
T  3398680 acacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 10294169 - 10294087
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||| | |||||||||||||||||| |||  |||| |||||||||||| ||||| || |||||||||| || |||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtc 10294087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 17841604 - 17841686
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||| | |||||| ||||||| |||||||||| || ||||| || |||||||||| ||||||| ||| |||||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatcagtgcttcatag 17841686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 7723246 - 7723323
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||| | |||||||||||   ||||||||||||||||||||||||||| || |||||  | ||||||||||    
T  7723246 gacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 7086863 - 7086775
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||| ||||| | ||||||||||||| | |||||| |||||||||||||||||| || ||| |  | |||| |||||||||||    
T  7086863 tgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtc 7086775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 13360373 - 13360420
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaatta 76  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 17302601 - 17302518
Alignment:
Q  43 taattacattgaattatatga-ttttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    ||||||||||||||||| ||| |||| |||||||||| |  |||||||| |||||||||  ||||||| ||||| |||||||||    
T  17302601 taattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtgtccgtatctgcgcttcatag 17302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 13364715 - 13364773
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    |||||| |||||| ||||||||||||||||||||||||||  || ||||| ||||||||    
T  13364715 acatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 26314646 - 26314684
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  26314646 atataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 97819 - 97864
Alignment:
Q  30 acaccaaaacatataattacattgaattatatgattttctcaaatt 75  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  97819 acaccaaaatatataattacatttaatcatatgattttctcaaatt 97864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 5462733 - 5462684
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcag 89  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtcag 5462684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 5732510 - 5732583
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||| | ||||||||||||| | || ||| ||||||||||||||||||  ||||||| || ||||||||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtc 5732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 13851785 - 13851716
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||||  | |||||||||||||||| ||||||||  | |||||||||| |||||    
T  13851785 acatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 16766760 - 16766683
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||||||||    
T  16766760 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 20518414 - 20518325
Alignment:
Q  19 tgtctgacac-gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||| |||||||| ||||||||||| | ||| |||| | ||||||||||||| || | ||||| ||  ||||||||||||||||    
T  20518414 tgtctgacaccgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgttagtgtgtcagtgtctgtgtc 20518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 33419231 - 33419182
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| |||||||||||||||||||||||| | ||| ||||||||||    
T  33419231 gacaccaacacatataattacattgaattatatcaatttttcaaattatt 33419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 6293493 - 6293429
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||||||||||||||| |||||||||| | ||||||||   |||||| || ||||||||    
T  6293493 ttaatgagttagatagaaatatggtatatgatagagcattatggcaacgtttggtcaatgtagcc 6293429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 7151473 - 7151421
Alignment:
Q  26 cacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||| ||||||||||||| | |||||| ||||||| ||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattatt 7151421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 7938162 - 7938102
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||||| | |||||||||||||| |||||||||| || ||||| || ||||||||||    
T  7938162 tataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 26562752 - 26562676
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    ||||||||| | | ||||||||||||| |||||||| ||||||||||||||| || || ||||| || |||| ||||    
T  26562752 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 33001289 - 33001357
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    ||||||| | ||||||||||||||| |||||| ||||||| |||||||||| || ||||| || |||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 34606 - 34543
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| ||| ||||||| || ||||||| |||||||||| ||  |||||||||||||||    
T  34606 ttaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagc 34543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 10339135 - 10339198
Alignment:
Q  38 acatataatta-cattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    ||||||||||| || |||||||| |||||||||||||||| | |||||||| || |||||||||    
T  10339135 acatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgt 10339198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 10770665 - 10770724
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||||| | || | |||||||| |||||||| ||||||| ||||||||||    
T  10770665 tgtctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 10770724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 10842581 - 10842494
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||| |||||| | |||||| ||||||| |||||||||| |||||||| || |||| |||||  ||||||  || |||||||||||    
T  10842581 acatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtcaatgtccgtgtccgtgcttcatag 10842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 11424707 - 11424750
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgatttt 67  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  11424707 gacacaacaccaacacatataattatattgaattatatgatttt 11424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 19044529 - 19044450
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||| |||||| | ||||||||| ||| |||||||| |||| ||||||||||||| |  ||||| || ||||||||||    
T  19044529 ctgacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 21924935 - 21924994
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||| | ||||||||||||| |||||||| |||| ||||||||||||| || |||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtc 21924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 35199723 - 35199681
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatgg 169  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  35199723 ttaatgagttagatagaaatat-gtatatgatagaacattatgg 35199681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 9024167 - 9024225
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattat 77  Q
    |||| ||||||||||  | |||||| ||||||||||||||| | |||||||||||||||    
T  9024167 tgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 13815505 - 13815451
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||| | |||||||| | ||||||||||| ||||||||||||| ||||    
T  13815505 gacacgacaccgagacatataacttcattgaattatgtgattttctcaaaatatt 13815451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 15443758 - 15443704
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||| ||||||| | ||||||||| |||||||||| | ||||||||||||||||    
T  15443758 gacacaacaccaacatatataattatattgaattatgttattttctcaaattatt 15443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 34290073 - 34290156
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| | |||||  |||||| |||||||| ||||| || ||||||||| |  ||||| |||||||||||| ||||||    
T  34290073 ctgacacgacaccgacacata--attacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtc 34290156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 413275 - 413328
Alignment:
Q  137 gatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    ||||||||||| |||||||||| || ||||| ||||| ||||||| ||||||||    
T  413275 gatagaaatatggtatatgatagaagattatagtgtcatttgatcaatgtagcc 413328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 6299554 - 6299521
Alignment:
Q  45 attacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||||| ||||||||||||||||    
T  6299554 attacattgaattatatcattttctcaaattatt 6299521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 6306364 - 6306331
Alignment:
Q  45 attacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||||| ||||||||||||||||    
T  6306364 attacattgaattatatcattttctcaaattatt 6306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 8389485 - 8389522
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  8389485 tataattacactgaattatatgattttcttaaattatt 8389522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 9195751 - 9195804
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| | ||||||||||||| | |||||| | ||||||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattatt 9195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 11591880 - 11591917
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaatt 75  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  11591880 acatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 32298608 - 32298677
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagt 98  Q
    |||||||| ||||||||||||| | |||||| ||||  ||| |||||||| |||||||  ||||||||||    
T  32298608 gacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagt 32298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 32299321 - 32299284
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  32299321 tataactacattgaattatgtgattttctcaaattatt 32299284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 32839660 - 32839725
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| | || ||||| ||||||||||||||||||  | |||||||||||||  ||||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattattaacagtgtcagcatgtcgatgtctgtgtc 32839725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 33340946 - 33340995
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| |||||| ||| |||||| |||| ||||||||||||||||||    
T  33340946 gacaccaacacatatgattccattgagttatgtgattttctcaaattatt 33340995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 35125152 - 35125103
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| |||||| ||| |||||| |||| ||||||||||||||||||    
T  35125152 gacaccaacacatatgattccattgagttatgtgattttctcaaattatt 35125103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 3966568 - 3966489
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||| | ||||||||||||| |||||| | |||||||||||||||||| |||||||| |||||||||||||    
T  3966568 ctgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 27144512 - 27144442
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtcc 108  Q
    ||||||||||||| | |||||| |||||| ||||||||||| |||||||| || |||||||||||||||||    
T  27144512 acatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtcc 27144442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 32630745 - 32630803
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  32630745 acatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtca 32630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 39205948 - 39205858
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 109  Q
    |||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||||| || |||||  | |||| |||||||| ||||    
T  39205948 tgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccg 39205858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 6035545 - 6035445
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcat 123  Q
    ||||||||||| | | ||||||||||| |||||||||| |||| ||||||||||| |||||||| || ||||||||||| ||||   ||| |||||||||    
T  6035545 gacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgtctttgtctatatccgtgcttcat 6035447  T
Q  124 ag 125  Q
    ||    
T  6035446 ag 6035445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 6471886 - 6471950
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 89  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||||||||||| || |||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcag 6471950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 32766939 - 32767002
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| || |||||||||||||||||||| |  ||||||||||||||||| ||||||||    
T  32766939 gacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtc 32767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 11685999 - 11685925
Alignment:
Q  27 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||| | ||||||||||||| | ||||||  || |||||||||||||| |||||||| |||||||||||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 38749554 - 38749640
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtg 105  Q
    |||| ||||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||  |||||||  |||||| |||| ||||    
T  38749554 tgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgtttgtg 38749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 43001844 - 43001762
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||| |||||||| | ||||| |||||||||| || |||||  |||||||||||| ||||||| ||| |||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccgtatccgtgcttcatag 43001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 26312828 - 26312755
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| ||||| || |||| ||||||||    
T  26312828 cgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtc 26312755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 4026429 - 4026365
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||| ||| ||||| |||||||||||  |||||||||||||  ||||||||||||||||||||    
T  4026429 ttaatgggtttgataggaatatagtatacaataaaacattatgacgtcgtttgatccatgtagcc 4026365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 18351003 - 18350939
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||||||||||| |||| || || |||||||||  ||||||||||||||||||||    
T  18351003 ttaatgagttggatagaaatatggtatttgttagaacattatgacgtcgtttgatccatgtagcc 18350939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 18592136 - 18592060
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||||||||||   |||||||||||||||||||||| | ||||||| ||| |||| |||||||| |||| |||||||    
T  18592136 gacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgt 18592060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 21191071 - 21191135
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||||||| ||||||| |||||||||| || ||||| ||||||||||||| |||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtc 21191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 23012418 - 23012458
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  23012418 acatataattacattaaattatatgattttctcaaattatt 23012458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 2436990 - 2436900
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    |||| ||||||||||| | ||||||||| |||  ||||||| |||||||  ||||||||| |||||||| || |||||||||| ||||||||    
T  2436990 tgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc-gtgtccgg 2436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 9449510 - 9449427
Alignment:
Q  46 ttacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatagttaa 129  Q
    |||||||||||||| ||||||||||||||||||   |||||| || || ||||||| ||||| | ||  |||||||||||||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcggtattcgtgcttcatagttaa 9449427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 16203795 - 16203874
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| | ||||||||||||| | ||||||  ||||||||||||||||| || ||||| |||||| |||||| |||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 22423808 - 22423891
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | | ||||||||| |||||||||| |||||||||||||||||| |  |||||||  ||||||| || |||||    
T  22423808 gacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtc 22423891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 31084367 - 31084301
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    ||||||||||||||||| ||||||| |||||||||| || ||||| || |||||||||| ||||||||    
T  31084367 taattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccgg 31084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 14674313 - 14674231
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||| | |||||| ||||||| |||||||||| || ||||| || |||||||||| ||||| | ||| |||||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtctgtatccgtgcttcatag 14674231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 30502388 - 30502446
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 30542731 - 30542789
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 30098372 - 30098335
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattatt 30098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    |||||||||| | ||||||||||||| | |||||| | |||||||||||||||| |||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 38657050 - 38657095
Alignment:
Q  152 tatgataaaacattatggtgtcgtttgatccatgtagccaacttca 197  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  38657050 tatgatagaacattatgatgtcgtttgattcatgtagccaacttca 38657095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 2645175 - 2645235
Alignment:
Q  130 tgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||| ||||||||| | |||| |||||||||||||| |  |||||||||||||||||||    
T  2645175 tgagttggatagaaatgtggtatttgataaaacattatagcatcgtttgatccatgtagcc 2645235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 12576961 - 12576897
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    ||||||||||  |||||||||| |||||||||| | |||||||||||| ||| || |||||||||    
T  12576961 ttaatgagttgaatagaaatatggtatatgatagaccattatggtgtcattttatacatgtagcc 12576897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 12927701 - 12927637
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 104  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| |||| |  |||| ||||||||    
T  12927701 atataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgt 12927637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 28296388 - 28296328
Alignment:
Q  27 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| |||||| | ||||||||||||| | ||||||||||||||||  |||||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtc 28296328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 28588674 - 28588742
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    ||||||| | || |||||||||| |||||||| ||||||||||||||||||  ||||||| || |||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 41091252 - 41091316
Alignment:
Q  23 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| | | ||||||||||||| |||||||| |||||||||||||| ||| || |||||    
T  41091252 tgacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 41995515 - 41995451
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||||||| ||||||| || ||||||| |  ||||| || ||||||||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtc 41995451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 683786 - 683735
Alignment:
Q  142 aaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||| || ||||||| ||||||||| ||| ||||||||||||||||||||    
T  683786 aaatatggtttatgatagaacattatgttgtagtttgatccatgtagccaac 683735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 12264839 - 12264902
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||| ||||| || | |||||||||||| ||| |||||||  |||||||||||||    
T  12264839 acatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtc 12264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 15086529 - 15086482
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaatta 76  Q
    |||||| | |||||||||||||||  ||||||||||||||||||||||    
T  15086529 gacaccgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 15405070 - 15405105
Alignment:
Q  43 taattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15405070 taattacattgaattatatgattttttcaaattatt 15405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 19737492 - 19737555
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||| ||| ||||||||||| | ||||||||||||||||  |||| ||||| ||||||||||    
T  19737492 acatatgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgtc 19737555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 29922494 - 29922557
Alignment:
Q  155 gataaaacattatggtgtcgtttgatccatgtagccaacttcatttgattggataagccttggt 218  Q
    |||| |||||||||| ||  ||||||||||||||||||| ||| ||| | ||||||||||||||    
T  29922494 gatagaacattatggcgtaatttgatccatgtagccaacctcacttggtgggataagccttggt 29922557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 34879399 - 34879352
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtg 85  Q
    |||||| |||||| |||||||||||||||||||||||| || ||||||    
T  34879399 acatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 10022684 - 10022642
Alignment:
Q  35 aaaacatataattacattgaattatatgattttctcaaattat 77  Q
    |||| ||||||||||| |||||||||||||||| |||||||||    
T  10022684 aaaatatataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 15588489 - 15588427
Alignment:
Q  128 aatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||| |||| ||| || |||||||| | |||||||||| ||||||||||| ||||||||    
T  15588489 aatgagttggataaaaacatggtatatgacagaacattatggcgtcgtttgatctatgtagcc 15588427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 17593716 - 17593778
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 84  Q
    |||||||  |||||| | ||||||||||| |||||||  |||||||||||||||||| |||||    
T  17593716 ctgacacaccaccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 17925172 - 17925222
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||| | |||||| ||||||||||||||| ||||||||| ||||||||    
T  17925172 cgacaccgacacatattattacattgaattatgtgattttcttaaattatt 17925222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 24273040 - 24273078
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaatta 76  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24273040 acatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 24389174 - 24389136
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaatta 76  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  24389174 acatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 26716178 - 26716124
Alignment:
Q  53 gaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| |||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtc 26716124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 26985918 - 26985864
Alignment:
Q  53 gaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| |||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtc 26985864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 16734930 - 16734828
Alignment:
Q  25 acacgacaccaaaacatataattaca---ttgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttc 121  Q
    |||||||||| | |||||||||||||   |||| |||||| ||||||| ||||||||  ||||||| || ||| |||||| |||| || || ||||||||    
T  16734930 acacgacaccgacacatataattacacacttga-ttatataattttcttaaattattaacggtgtcggcgtgttagtgtccgtgttcgtatgtgtgcttc 16734832  T
Q  122 atag 125  Q
    ||||    
T  16734831 atag 16734828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 25863250 - 25863213
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  25863250 tataattacactgaattatatcattttctcaaattatt 25863213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 27998622 - 27998683
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgta 187  Q
    |||||||||||||||| || ||  ||||||||| || ||||||  |||||||||||||||||    
T  27998622 ttaatgagttagataggaacatgatatatgatagaatattatgacgtcgtttgatccatgta 27998683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 36123259 - 36123222
Alignment:
Q  150 tatatgataaaacattatggtgtcgtttgatccatgta 187  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  36123259 tatatgatagaacattatggtggcgtttgatccatgta 36123222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 41894280 - 41894321
Alignment:
Q  152 tatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    ||||||| |||||||||||||  |||||||||||||||||||    
T  41894280 tatgatacaacattatggtgtaatttgatccatgtagccaac 41894321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 42029811 - 42029770
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttct 69  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  42029811 cgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 42488063 - 42488132
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||| ||||||||||||||||||| ||||| | |||||||   |||||||  | ||||||||||||||||    
T  42488063 acatgtaattacattgaattatataattttattaaattatcaacggtgtcgacgtgtcagtgtctgtgtc 42488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 3520352 - 3520421
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||| ||||||||||    
T  3520352 acatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 25791714 - 25791616
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcata 124  Q
    |||||||||| | |||||||| |||||||| |||| ||| |||||||||| ||| |||||||| || |||||||||||||||||| ||| ||||||||||    
T  25791714 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtccgtatccgtgcttcata 25791616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 32308183 - 32308082
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcat 123  Q
    ||||||||||  | ||||| ||||||| |||||||| |||||||||||||||||| |||||||| || ||||||||||  ||| || || ||||||||||    
T  32308183 gacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccatgttcgtatttgtgcttcat 32308084  T
Q  124 ag 125  Q
    ||    
T  32308083 ag 32308082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 6807388 - 6807447
Alignment:
Q  129 atgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    ||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||    
T  6807388 atgagttagatagaaatatggtgtatgatagaacattatggcgtcgtttgatccatgtag 6807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 21138983 - 21139090
Alignment:
Q  15 atcatgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatct 114  Q
    |||||||| ||||||||||| | ||||||||||||| | ||||||  |||||||||||||||||  ||||||   |||||||||||||||||| | |||     
T  21138983 atcatgtccgacacgacaccgacacatataattacagt-aattat--gattttctcaaattattaacggtgttgacatgtcagtgtctgtgtctgtatcc 21139079  T
Q  115 gtgcttcatag 125  Q
    |||||||||||    
T  21139080 gtgcttcatag 21139090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 22602706 - 22602789
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | ||||||||||||| |||||||| |||||||||||||| |||  ||||||| || |||||||| |||||||    
T  22602706 gacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtc 22602789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 22174181 - 22174245
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    ||||||| |||||||||||||| |||| ||||| |||||||||| || |||||||||||||||||    
T  22174181 ttaatgaattagatagaaatatggtatgtgatagaacattatggcgttgtttgatccatgtagcc 22174245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 5236049 - 5235966
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | | ||||||||||| | |||||||| ||||||| |||||||| ||||||||  | ||||||||||||||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtc 5235966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 15902885 - 15902802
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||| ||||| | ||||||||||||| | |||||| ||||||| ||||||||||   |||||| |||||||||||||||||||    
T  15902885 gacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtc 15902802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 20549850 - 20549771
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| | ||||||||||||| |||||||  |||||||||||||||||| |||||||| |  ||||||||| ||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 42720900 - 42720963
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||||| |||||| ||||||| |||||||||| ||||||||| | ||||||||||    
T  42720900 acatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 7197312 - 7197394
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||||||||||| |||||||| | |||||||| || ||||| || ||||| ||||||||| || ||| |||||||||||    
T  7197312 taattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgttcgtatccgtgcttcatag 7197394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 5548744 - 5548671
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcat 92  Q
    |||| ||||||||||  | ||||||||||||| |||||||| |||||||||||||||||  |||||||| ||||    
T  5548744 tgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 35297669 - 35297722
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||| ||||||||||| | |||||||| ||||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatt 35297722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 11700848 - 11700768
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||||||||||||| ||||||| ||||||||||  ||||||||||  ||| ||||| ||||||| ||| |||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattattaacggtgtcagc--gtccgtgtc-gtgtccgtatccgtgcttcatag 11700768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 17307956 - 17307904
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaatta 76  Q
    ||||||||||||| ||||||||||||| |||||||| | ||||||||||||||    
T  17307956 gacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 22868091 - 22868023
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgt 106  Q
    ||||||||||||| |||||||| ||||||||||| |||||| | |||||| || |||||||||| ||||    
T  22868091 acatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgt 22868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 27945105 - 27945021
Alignment:
Q  23 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||||| | || | |||||||| |||||||| | |||||||||||||||| | |||||| || |||||||||| |||||    
T  27945105 tgacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 26329378 - 26329461
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| || | ||||||||||||| |||||| | || |||||||||||||||  || |||| || ||||||||||||||||    
T  26329378 gacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtc 26329461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||| | ||||||||||| | |||||||| |||||||||||||||||| ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 21078124 - 21078190
Alignment:
Q  152 tatgataaaacattatggtgtcgtttgatccatgtagccaacttcatttgattggataagccttggt 218  Q
    ||||||| |||||||||| ||| |||||||||||||||| |||||||||  | ||||||| ||||||    
T  21078124 tatgatagaacattatggcgtcatttgatccatgtagccgacttcatttagtgggataaggcttggt 21078190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 22484083 - 22484005
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||| | ||||||||||| | ||||||||   ||||||| |||||||| |||||||| || ||||||||||||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 29787378 - 29787428
Alignment:
Q  37 aacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||| ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  29787378 aacacataattacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 6630909 - 6630986
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 102  Q
    |||||||| | | ||||||||||||| |||||||  ||| |||||||||||||| | |||||| || |||||||||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 7438750 - 7438693
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    ||||||||||||||||| ||||||| ||||||||||  | ||||| ||||||||||||    
T  7438750 taattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 8160479 - 8160414
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 89  Q
    ||||||| ||||| ||||||||||||| | |||||| | ||||||| |||||||| ||||||||||    
T  8160479 gacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtcag 8160414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 23191947 - 23191882
Alignment:
Q  36 aaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||| |||||||| |||| ||| |||||||||||||||||| |||||||| || | ||||||||    
T  23191947 aaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 38134416 - 38134473
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    |||||| ||||||||||||||| | ||||||||||||||||  |||||||| ||||||    
T  38134416 acatatgattacattgaattatgtcattttctcaaattattatcggtgtcaacatgtc 38134473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 38143281 - 38143232
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattatt 38143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 1401071 - 1401011
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||||| |||||||| ||| |||||||||||||| ||| | ||||| ||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtc 1401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 1433522 - 1433434
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||| ||||||||||| | |||||||||||||   ||| || ||||||||||||||||||  ||||||| || ||||| |||| |||||    
T  1433522 tgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtc 1433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 33384573 - 33384641
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||| ||||| ||||||| ||||||||||||| | ||||||| |||||||||| ||||||  |||||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattataggattttctcagattattaacggtgtc 33384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 5233697 - 5233638
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||| ||||| ||||||| ||||||||||||| |  ||||| ||||||||||||||||||    
T  5233697 tgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattatt 5233638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 7758390 - 7758319
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagc 90  Q
    |||| ||||||||||| | ||| ||||||| | |||||||||| ||||||| |||||||| | |||||||||    
T  7758390 tgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgtcagc 7758319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 11722122 - 11722177
Alignment:
Q  52 tgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| ||||||||||||||| || |||||||| || |||||||||| |||||    
T  11722122 tgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtc 11722177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11890910 - 11890969
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||| ||||||||||| | ||  ||||||||| |||||||||||||||| ||||||||||    
T  11890910 tgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatt 11890969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 16341564 - 16341505
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||| |||||||||||   ||||||||||||| | |||||| ||||||||||||||||||    
T  16341564 tgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatt 16341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 18013070 - 18013153
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||  | ||||||||||||| |||||||| | ||||| | |||||||| |  ||||||| ||||||||||| |||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtc 18013153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 30731080 - 30731037
Alignment:
Q  44 aattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtc 30731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3142074 - 3142128
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||| ||||| | |||||| |||||||||||||||||||||| ||||| |||||    
T  3142074 gacacaacaccgacacatatgattacattgaattatatgatttactcaatttatt 3142128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 3629557 - 3629623
Alignment:
Q  127 taatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||| |||||||||||||||| |||||||||| | |||||| |  || ||||||| |||||||||||    
T  3629557 taattagttagatagaaatatggtatatgatagagcattattgcatcttttgatcgatgtagccaac 3629623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 5409827 - 5409909
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||| ||||||||||| | || | ||||| || |||||||| ||||||| |||||||||| || || ||||| ||||||||||    
T  5409827 tgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7058489 - 7058435
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||| || | |||||||| ||||||| |||||||| ||||||||||    
T  7058489 gacacgacaccaacacttgtaattacactgaattacatgattttttcaaattatt 7058435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7328687 - 7328741
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||| | ||||||||||||| | |||||| | ||||||||||||||||    
T  7328687 gacacgacaccgacacatataattacactaaattatgttattttctcaaattatt 7328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 17851480 - 17851434
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggt 84  Q
    ||||||||||||| |||||||| ||||||||| |||||||| |||||    
T  17851480 acatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 23128658 - 23128728
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    |||| ||||| | |||||| |||||| ||||||||||| |||||||||||||||   ||||||||| ||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgtgtc 23128728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 30516374 - 30516408
Alignment:
Q  45 attacattgaattatatgattttctcaaattattg 79  Q
    ||||||||||||||||| |||||||||||||||||    
T  30516374 attacattgaattatatcattttctcaaattattg 30516408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 46332993 - 46332919
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 102  Q
    |||||||||||||| |||||||||| |||| | | ||||||||||| ||||  |  ||||| |||||||||||||    
T  46332993 cgacaccaaaacatttaattacattcaattgtgtcattttctcaaactattaccactgtcaacatgtcagtgtct 46332919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 5835305 - 5835232
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtct 102  Q
    |||||| | ||||||||||||| |||||||| | ||||||||||| |||| | |||||| || | |||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtct 5835232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattat 77  Q
    ||||||| | ||||||||||||| |||||| | |||||||||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 14729746 - 14729656
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatagttaatgagt 134  Q
    ||||||||| |||||||  |||||||||||||||||| ||||| |||  ||| | ||||| ||||  | ||| ||||||||||||| ||||||    
T  14729746 ataattacactgaattacgtgattttctcaaattattagcggtttca--atggccgtgtccgtgtttgtatccgtgcttcatagttcatgagt 14729656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 19930951 - 19930992
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattg 79  Q
    |||||||||||||||||||||| | ||||| |||||||||||    
T  19930951 acatataattacattgaattatgtcattttatcaaattattg 19930992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 24146874 - 24146825
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||| | ||||||||||| |||||||||| ||||||||| ||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattatt 24146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 24339705 - 24339628
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| || ||||| ||||    
T  24339705 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtc 24339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 39812144 - 39812181
Alignment:
Q  151 atatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  39812144 atatgatagaacattatgatgtcgtttgatccatgtag 39812181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 5e-18; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 55244459 - 55244518
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatg 185  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  55244459 ttaatgagttggatagaaatatggtatatgatagaacattatggtgtcgtttgatccatg 55244518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 25948878 - 25948966
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||| ||||||||||||| || |||||||||| |||||||| ||||||| |||||||||| || || || ||||||||||||| |||||    
T  25948878 tgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 8383316 - 8383237
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| | || |||||||||| ||||||||||||||||||||||||||| |||||||| || ||||| |||| |||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 8039831 - 8039893
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    ||||||||||| | ||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  8039831 gacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 41842625 - 41842550
Alignment:
Q  125 gttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaacttcattt 200  Q
    ||||||||||||||| ||||||| || | ||||| |||||||||||||  |||||||||||||| |||| ||||||    
T  41842625 gttaatgagttagattgaaatatggtttttgatagaacattatggtgtaatttgatccatgtagtcaacctcattt 41842550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 34307793 - 34307859
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||| |||| ||| |||||||||||||||||| ||||||||||| |||  |||||||||||    
T  34307793 tataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtc 34307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 5441045 - 5441110
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||| ||||||||||| ||||||||||||||| || |||||| | || ||||||||||||||||    
T  5441045 ataattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtc 5441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 9624689 - 9624640
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtca 88  Q
    ||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtca 9624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 15812832 - 15812893
Alignment:
Q  39 catataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||| ||||||||| ||||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcggcgtcagcatgccagtgt 15812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 29112292 - 29112353
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||| ||||||||||||||||||||||| ||| | ||||||| | ||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtc 29112353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16789077 - 16789021
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||||| || |||||||||| |||||||||||||||| | ||||||||    
T  16789077 ctgacacgacaccaacacttataattacactgaattatatgatttttttaaattatt 16789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 42026637 - 42026573
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||||||||||||||| |||||||||| |||||||||| ||  |||||| ||| |||||    
T  42026637 ttaatgagttagatagaaatatggtatatgatagaacattatggcgttatttgattcatttagcc 42026573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7928509 - 7928450
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||| | ||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtc 7928450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 11284169 - 11284236
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||||||||| |||| |||||| |||||||||  |||||||| |  ||||||||||||||||||||||    
T  11284169 ttaatgagttggatataaatatggtatatgattgaacattattgcatcgtttgatccatgtagccaac 11284236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 11313796 - 11313859
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| || ||||||||||||| | |||||| |||||||||||||||||| || |||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtc 11313859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 16192746 - 16192809
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||  |||||||    
T  16192746 gacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtc 16192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 10455852 - 10455770
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||||| ||||||||||||| | | |||||||||||||||| |||||| || ||||  || ||||| || |||||||    
T  10455852 acacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtc 10455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 21419455 - 21419505
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||| | |||||||||||||||||||||| ||||||| ||||||||    
T  21419455 cgacaccaacatatataattacattgaattatattattttcttaaattatt 21419505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 23184076 - 23184122
Alignment:
Q  32 accaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  23184076 accaacacatataattacatagaattatatgattttgtcaaattatt 23184122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 32804550 - 32804608
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtca 96  Q
    ||||||||||||| | |||||| ||||||||||||||||||  ||||||| ||||||||    
T  32804550 acatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 46140588 - 46140650
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||||| |||||||||||||  || |||| |||||||||| || |||||||||||||||    
T  46140588 ttaatgagtttgatagaaatatagcttacgatagaacattatggagttgtttgatccatgtag 46140650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 40150572 - 40150621
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatt 40150621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 6525713 - 6525773
Alignment:
Q  61 tgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttc 121  Q
    |||||||||||||||||| ||||||||  |||||||||||  ||||||| ||| |||||||    
T  6525713 tgattttctcaaattattagcggtgtcgacatgtcagtgtacgtgtccgtatccgtgcttc 6525773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 29508493 - 29508453
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  29508493 acatataattacactgaattatatgattttttcaaattatt 29508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 41971371 - 41971303
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaact 194  Q
    ||||||||||  | ||||||||  ||||||||| |||||||||  || |||||||||||||||||||||    
T  41971371 ttaatgagttgtacagaaatatgatatatgatagaacattatgacgttgtttgatccatgtagccaact 41971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 4469897 - 4469830
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||||| |  || ||||| ||||||||||    
T  4469897 atatacttacactgaattatgtgattttcttaaattattggcggtattggcgtgtcaatgtctgtgtc 4469830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 10690274 - 10690321
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 14829752 - 14829670
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | || | |||||||  |||||||| ||||||| |||||||||| || ||||| || ||||||||||||||||    
T  14829752 gacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaatta 76  Q
    |||||||||||| ||||||||||||| | |||||| ||||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 29601073 - 29601136
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| |||  ||||||||| ||||||| ||||||||| |||  |||||||||||||||    
T  29601073 ttaatgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccatgtagc 29601136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 49505164 - 49505227
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||| | |||||| |||||||||||||||||| ||||| || || |||| |||||    
T  49505164 acatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtc 49505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 49651782 - 49651853
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    ||||||||||| | || | |||||||| |||||||| ||||||| |||||||||| || ||||| |||||||    
T  49651782 gacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 49841797 - 49841860
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| ||| ||||||| |||||||||| ||||||||||  |  |||||||||||||||    
T  49841797 ttaatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccatgtagc 49841860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 5407260 - 5407306
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtc 5407306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 23870572 - 23870618
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgtc 23870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 47775791 - 47775745
Alignment:
Q  21 tctgacacgacaccaaaacatataattacattgaattatatgatttt 67  Q
    |||||||| ||||||| |||| ||||||||||||||||||| |||||    
T  47775791 tctgacacaacaccaacacatgtaattacattgaattatatcatttt 47775745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 48353731 - 48353781
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  48353731 cgacaccgatacatataattacaattaattatttgattttctcaaattatt 48353781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 8789550 - 8789599
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattat 77  Q
    ||||||| | |||||||||||||  ||||||| |||||||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 12704056 - 12704007
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| |||||||| || ||||||||||||||| | ||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtc 12704007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 13414528 - 13414487
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttct 69  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  13414528 cgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 17005632 - 17005669
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  17005632 tataattacactgaattatatgattttatcaaattatt 17005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 21720807 - 21720742
Alignment:
Q  44 aattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccg 109  Q
    ||||||| ||||||||  ||| |||||||||||||  ||||||| || |||||||||| |||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtccg 21720742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 22774066 - 22774167
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcat 123  Q
    |||| |||||| | || |||||||||| |||| ||| ||| ||| || ||||||| | ||||||  | |||| ||||||||||||| ||| |||||||||    
T  22774066 gacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtctgtgtccgtatccgtgcttcat 22774165  T
Q  124 ag 125  Q
    ||    
T  22774166 ag 22774167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 27764749 - 27764716
Alignment:
Q  44 aattacattgaattatatgattttctcaaattat 77  Q
    |||||||||||||||||| |||||||||||||||    
T  27764749 aattacattgaattatataattttctcaaattat 27764716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 33359779 - 33359738
Alignment:
Q  69 tcaaattattggcggtgtcagcatgtcagtgtctgtgtccgg 110  Q
    |||||||||| || |||||||| |||||||||||||||||||    
T  33359779 tcaaattattagctgtgtcagcgtgtcagtgtctgtgtccgg 33359738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 35222997 - 35222956
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttct 69  Q
    ||||||| | |||||||||||||||||||||| |||||||||    
T  35222997 cgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 39535477 - 39535440
Alignment:
Q  150 tatatgataaaacattatggtgtcgtttgatccatgta 187  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  39535477 tatatgatagaacattatggtggcgtttgatccatgta 39535440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 7e-17; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 37411254 - 37411323
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| ||| |||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  37411254 acatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 37559021 - 37558939
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    ||||||||||||||||| |||||||  ||||||||| || ||||| || |||||||||| ||||||| ||| |||||||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatag 37558939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 21616811 - 21616742
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||| || |||| ||||| |||||    
T  21616811 acatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 8197642 - 8197578
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| |||||||||||  ||||||||| || ||||||| ||||||||||||||||||||    
T  8197642 ttaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagcc 8197578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 8202402 - 8202338
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| |||||||||||  ||||||||| || ||||||| ||||||||||||||||||||    
T  8202402 ttaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagcc 8202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 44860382 - 44860318
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcag 89  Q
    |||||||||| | ||||||||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcag 44860318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 18276579 - 18276504
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 104  Q
    |||||| | ||| ||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgt 18276504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 37470234 - 37470171
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| ||| ||||||| | |||||||| ||||||||||||| ||||||||||||||||    
T  37470234 ttaatgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatccatgtagc 37470171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 26784441 - 26784375
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaa 192  Q
    ||||||||||  |||||||||| ||||||||||||||||| |||| |  ||||||||||||||||||    
T  26784441 ttaatgagttgaatagaaatatggtatatgataaaacattttggtttaatttgatccatgtagccaa 26784375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 21782832 - 21782897
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| |||||||| |||||||||||||||||| || ||||| || ||||||||| ||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtc 21782897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 23718075 - 23718006
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||| |  |||||||||| |||||    
T  23718075 acatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 24105747 - 24105678
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||||| ||| |||||||||||||| |||||||| |  |||||||||| |||||    
T  24105747 acatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 34691805 - 34691861
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 84  Q
    ||||||| | ||||||||||||| |||||||||||||||| |||||||||| |||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 34714217 - 34714273
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggt 84  Q
    ||||||| | ||||||||||||| |||||||||||||||| |||||||||| |||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 16626053 - 16626002
Alignment:
Q  138 atagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| |||| ||||| ||| ||||||||||||||||||||||||||    
T  16626053 atagaaatatggtatttgatagaacgttatggtgtcgtttgatccatgtagc 16626002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 24975321 - 24975384
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||| |  |||||| ||||| ||||||||| ||||||||||||||||| ||||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 19336994 - 19336928
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaa 192  Q
    |||||||||| ||| ||||||| || ||||||| |||||||||| ||  ||||||||||||||||||    
T  19336994 ttaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaa 19336928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 28677959 - 28677909
Alignment:
Q  37 aacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  28677959 aacatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 30527591 - 30527645
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||| ||| | ||||||||||||| | |||||||||||||||||||||||||    
T  30527591 gacacgataccgacacatataattacactaaattatatgattttctcaaattatt 30527645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 32402681 - 32402743
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||||| ||||||||||  |||||||||| ||||||||||| || ||||||||| ||||    
T  32402681 ttaatgagttggatagaaataaggtatatgatagaacattatggtttcatttgatccacgtag 32402743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 16069268 - 16069333
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| |||||||||||||||| | ||||||||  ||||||| || |||||||||| |||||    
T  16069268 ataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 6219161 - 6219213
Alignment:
Q  141 gaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    ||||||| || ||||||| |||||||||||||  |||||||||||||||||||    
T  6219161 gaaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaac 6219213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 9496046 - 9496114
Alignment:
Q  125 gttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    ||||||||||| |||  |||||| || ||||||| |||||||||| ||  |||||||||||||||||||    
T  9496046 gttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaac 9496114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 12940950 - 12941014
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||||||||||||||| |||||||||| |  |||||| | |||||||||| |||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtc 12941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 19235085 - 19235017
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaact 194  Q
    ||||||| || ||||||||||| |||| ||||| |||||| ||  ||||||| ||||||||||||||||    
T  19235085 ttaatgatttggatagaaatatggtatttgatagaacattctgtcgtcgtttaatccatgtagccaact 19235017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 20473366 - 20473302
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||||||||||| ||| | |||||||| |  ||||| |||||||||||||||||||    
T  20473366 taattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtc 20473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 27084302 - 27084262
Alignment:
Q  47 tacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  27084302 tacattgaattatatgattttctcaaattattagcagtgtc 27084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 33287602 - 33287670
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaact 194  Q
    |||||||||||||| ||||||| || ||||||| |||||||||   | ||||||||| |||||||||||    
T  33287602 ttaatgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaact 33287670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 35056931 - 35056883
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaa 72  Q
    ||||||||||| | ||||||||||||| ||||||||||| |||||||||    
T  35056931 gacacgacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 4332971 - 4332908
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtg 105  Q
    |||||||||||||||||| |||||||| |||||||||  | ||||| |||||| ||| ||||||    
T  4332971 ataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtg 4332908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 18622670 - 18622615
Alignment:
Q  23 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||| || |||||||||| |||||||| ||||||| | ||||||||    
T  18622670 tgacacgacaccaacacgtataattacactgaattatgtgattttattaaattatt 18622615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 31808126 - 31808063
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||| |||||||| ||||||| | |||||||| |||||||| |  ||||||||||    
T  31808126 acatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 896260 - 896198
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||||| ||||||||||| ||| ||||||||||||| |||| || ||||| || |||||||||    
T  896260 acatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 5367251 - 5367201
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattatt 5367201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 18420430 - 18420484
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    ||||| ||||| | || ||||||| ||||||||||| ||||||||||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattatt 18420484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 22084848 - 22084882
Alignment:
Q  44 aattacattgaattatatgattttctcaaattatt 78  Q
    ||||||| |||||||||||||||||||||||||||    
T  22084848 aattacactgaattatatgattttctcaaattatt 22084882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 22557010 - 22556964
Alignment:
Q  38 acatataattacattgaattatatgatt-ttctcaaattattggcgg 83  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||    
T  22557010 acatataattacattgaattatatgattattttcaaattattagcgg 22556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 23354669 - 23354731
Alignment:
Q  45 attacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||| | |||||||| ||||||||||||||||  | ||||||||||||| ||||| |||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 1328023 - 1327978
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||| | |||||| |||||||||||||||||||| ||||||||    
T  1328023 ataattatactgaattttatgattttctcaaattattagcggtgtc 1327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 8187299 - 8187352
Alignment:
Q  137 gatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    ||||||| ||| |||| | ||| ||||||||||||| |||||||||||||||||    
T  8187299 gatagaagtatggtatttaatacaacattatggtgttgtttgatccatgtagcc 8187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 20539672 - 20539753
Alignment:
Q  26 cacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| | || | |||||||| | |||||||||||||| |||||||||| || |||||  | |||||||||| |||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 23355021 - 23355074
Alignment:
Q  54 aattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| ||||||||||||||||  | ||||||||||||| ||||| |||||    
T  23355021 aattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtc 23355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 29159286 - 29159335
Alignment:
Q  138 atagaaatatagtatatgataaaacattatggtgtcgtttgatccatgta 187  Q
    ||||||||||  ||| |||||||| ||||||| |||||||||||||||||    
T  29159286 atagaaatatgatatttgataaaatattatggcgtcgtttgatccatgta 29159335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 29970545 - 29970622
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||| | | |||||| |||||| |||| |||  ||||||||||||||||| |||||||||   ||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 33861935 - 33861992
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattg 79  Q
    ||||||||| ||||| |||||| ||| |||| ||||||||  ||||||||||||||||    
T  33861935 ctgacacgataccaacacatatgattgcattaaattatatagttttctcaaattattg 33861992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 35449562 - 35449493
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||| | ||||||||||||||||||  | ||||  || ||||||||| ||||||    
T  35449562 acatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtc 35449493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 99957 - 99879
Alignment:
Q  23 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||  |||||||  |||||| |||||    
T  99957 tgacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgtc 99879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 90890 - 90823
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| |||||||||||||||||||||||||||   |||||  |  ||||||||||||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtc 90823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 12606830 - 12606888
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtc 12606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 24362212 - 24362281
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| |||||||| ||||| |||||||||||| |||||||| || |||| |||||||||||    
T  24362212 acatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtc 24362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 21465477 - 21465412
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||||| || | ||||||||| ||||||||||||||| |||||||||| || |||||    
T  21465477 ctgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 31236587 - 31236636
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||    
T  31236587 acatataattacattgaattatgtgattttctcaaattattagcagtgtc 31236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 34897134 - 34897085
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  34897134 acatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 37283824 - 37283889
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||| |||||||| ||||||||||| |||||| |||||| | ||||||||||||| |||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtc 37283889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 23492215 - 23492279
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| |||||||||||  ||||||||| |||| ||||||||| ||| ||||||||||||    
T  23492215 ttaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagcc 23492279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 24669477 - 24669413
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||||||| | |||| |||||||||||  |||||||||| ||||||||||||||||    
T  24669477 taattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtc 24669413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 25172693 - 25172777
Alignment:
Q  23 tgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||||||| | ||||||||||||||| || ||| | ||||| |||||||||| || |||||||||| ||||| || |||||    
T  25172693 tgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtatccgtgtc 25172777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 14634137 - 14634200
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| | ||||||||||| |||||||||| ||||||| ||||| || ||||||||    
T  14634137 gacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtc 14634200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 20679408 - 20679471
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgt 104  Q
    |||||||||| |||| ||| |||||||||||||||||| | ||||||  |||||||||||||||    
T  20679408 tataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 22652039 - 22651956
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||| | || | |||||| |||||||||| ||||||| |||||||||| || ||||| || |||||||||| |||||    
T  22652039 gacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 31109528 - 31109615
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    ||||||| ||| | |||||| | ||||||||||||||||||  ||||||| || |||||||||| ||||||  ||| |||||||||||    
T  31109528 acatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtccatatcagtgcttcatag 31109615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 39954289 - 39954352
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||||||||| | |||||| |||||||||||||||||| |||||||| || |||| |||||    
T  39954289 acatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 11733928 - 11733986
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccat 184  Q
    |||||||||||||||||||||| |||| ||||| | |||||||| ||||||||| ||||    
T  11733928 ttaatgagttagatagaaatatggtatgtgatagagcattatggcgtcgtttgaaccat 11733986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 12611680 - 12611742
Alignment:
Q  128 aatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||| | |||||||||  |||||| || ||| |||||||||||||||||||||||||||    
T  12611680 aatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagcc 12611742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 36450769 - 36450851
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    |||||||| |||||| | ||||||| |||||||||| |  ||||| || |||||||||| ||||||| ||| |||||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgtatccgtgcttcatag 36450851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 4611583 - 4611534
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| |||||||| | |||||||||||||||| ||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtc 4611534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||| | ||||||||||||| |||||||| ||||||||| ||||||||   |||||| || ||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 11803321 - 11803268
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattatt 11803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 11927083 - 11927136
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| | ||||||||||||| |||||||| ||||||| ||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatt 11927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 12559107 - 12559156
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  12559107 gacaccaatacatatgattacactgaattatatcattttctcaaattatt 12559156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 13844596 - 13844669
Alignment:
Q  28 cgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    ||||||| | ||||||||||||| | |||||| |||||||||||||||||| || ||||| || |||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 14134746 - 14134661
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtccggatctgtgcttcatag 125  Q
    ||||||||||| |||||||| |||||||||||||||||| |   ||||  | |||| ||||| ||||||| ||| |||||||||||    
T  14134746 atataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtccgtatccgtgcttcatag 14134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 3638434 - 3638390
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggt 170  Q
    |||||||||| || ||||||||||||||||||| |||||||||||    
T  3638434 ttaatgagttggacagaaatatagtatatgatagaacattatggt 3638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 4673440 - 4673504
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||||| |||||| ||||||||| ||||||||||  | ||||| || ||||||||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtc 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 20785475 - 20785523
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgt 86  Q
    ||||||||||||||| |||||| |||||| ||||||||||| |||||||    
T  20785475 acatataattacattaaattatgtgatttcctcaaattattagcggtgt 20785523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 24017452 - 24017488
Alignment:
Q  42 ataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||||||||||||| ||||||||||||    
T  24017452 ataattacattgaattatatgattgtctcaaattatt 24017488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 34201056 - 34201096
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatt 34201096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 36934730 - 36934670
Alignment:
Q  27 acgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||| |||| ||||||||||||| |||||||| ||||||| || ||||||| ||||||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtc 36934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 39967600 - 39967536
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagcc 190  Q
    |||||||||| ||| || ||||||| |||| || |||||||||| || |||||||||||||||||    
T  39967600 ttaatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatccatgtagcc 39967536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 3508108 - 3508061
Alignment:
Q  31 caccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatt 3508061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 30748644 - 30748707
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagc 189  Q
    |||||||||| |||||||||||  ||||| ||  ||||||||| |||| |||||||||||||||    
T  30748644 ttaatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtagc 30748707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 12985439 - 12985401
Alignment:
Q  40 atataattacattgaattatatgattttctcaaattatt 78  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  12985439 atatgattacattgaattatgtgattttctcaaattatt 12985401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 3025597 - 3025560
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatt 3025560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 11944727 - 11944674
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||| | ||||||||||||| ||| |||| ||||||| ||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatt 11944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 14731761 - 14731712
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| | |||||| |||||||||||||||||| || |||||    
T  14731761 acatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 18069154 - 18069191
Alignment:
Q  51 ttgaattatatgattttctcaaattattggcggtgtca 88  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  18069154 ttgaattatttgattttctcaaattattagcggtgtca 18069191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 26642708 - 26642745
Alignment:
Q  151 atatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||| | |||||||||||||||||||||||||||    
T  26642708 atatgatagatcattatggtgtcgtttgatccatgtag 26642745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 27213596 - 27213547
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtc 87  Q
    ||||||||||||| |||||||| ||||||||| |||||||| || |||||    
T  27213596 acatataattacagtgaattatgtgattttctgaaattattagcagtgtc 27213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 28384988 - 28385073
Alignment:
Q  22 ctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||||| |||||| | ||||||||||||| ||||||||  |||||  ||| ||||||  ||||||| | ||||||||||| |||||    
T  28384988 ctgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtc 28385073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 44521 - 44592
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtc 95  Q
    ||||||| ||| | ||||||||||||| |||||||| ||||||||||||||| || ||||||||||| ||||    
T  44521 gacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagcttgtc 44592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 28919 - 28837
Alignment:
Q  18 atgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    ||||||||||| ||||| | ||||||||||||||||||||||  |||||||| ||||||||  ||||||| || ||| |||||    
T  28919 atgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgt 28837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 53243 - 53170
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcag 97  Q
    |||||| |||| | || |||||||||| |||||||| |||||||||||||||||||||||| || || ||||||    
T  53243 gacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 135303 - 135391
Alignment:
Q  19 tgtctgacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    |||| ||||||||||| | |||||||||||||  ||||||| |||||||||||||||||| || ||||| |  |||  |||||||||||    
T  135303 tgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtc 135391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 21106 - 21023
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||| ||| | ||||||||||| |  || |||| ||||||||||||||||||  | ||||||||||||||||||| |||||    
T  21106 gacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtc 21023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 9744 - 9819
Alignment:
Q  25 acacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgt 100  Q
    |||||||||| | ||||||||||||| |||||||  |||||||||||||||||| | || ||| ||||||| ||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 25544 - 25482
Alignment:
Q  126 ttaatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtag 188  Q
    |||||||||| ||||||||||   ||||||||||||||||||||  |||||||||| ||||||    
T  25544 ttaatgagttggatagaaataagttatatgataaaacattatggcttcgtttgatctatgtag 25482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 92851 - 92793
Alignment:
Q  43 taattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtc 101  Q
    |||||||| |||||||| | |||||||||||||||| |||||||| || ||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 26442 - 26373
Alignment:
Q  38 acatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||  |||||||||||| |||||||||||||||||| | ||||||  | ||||| ||||||||||    
T  26442 acatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 240022 - 240071
Alignment:
Q  29 gacaccaaaacatataattacattgaattatatgattttctcaaattatt 78  Q
    |||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattatt 240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 6862 - 6806
Alignment:
Q  137 gatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    ||||||||||| |||||||||| ||||||||||  |  |||||||||||||||||||    
T  6862 gatagaaatatggtatatgatataacattatggcataatttgatccatgtagccaac 6806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1449 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 1262 - 1305
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgatttt 67  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||    
T  1262 gacacgacaccaaaatatataattacatcgaattatataatttt 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 263368 - 263451
Alignment:
Q  24 gacacgacaccaaaacatataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||  | || |||||||||| |||||||| || ||||||||||||||| || ||||   |||||||||||| |||||    
T  263368 gacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtc 263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 16528 - 16462
Alignment:
Q  127 taatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccatgtagccaac 193  Q
    |||| |||||||||||||||| |||||||||| | |||||| |  || ||||||| |||||||||||    
T  16528 taattagttagatagaaatatggtatatgatagagcattattgcatcttttgatcgatgtagccaac 16462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 102948 - 102914
Alignment:
Q  44 aattacattgaattatatgattttctcaaattatt 78  Q
    |||||||||||||||||| ||||||||||||||||    
T  102948 aattacattgaattatatcattttctcaaattatt 102914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 225281 - 225347
Alignment:
Q  41 tataattacattgaattatatgattttctcaaattattggcggtgtcagcatgtcagtgtctgtgtc 107  Q
    ||||||||||||| ||||| | ||||||||||||||||  | ||||| || |||||||||| |||||    
T  225281 tataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

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