View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14123_low_8 (Length: 289)
Name: NF14123_low_8
Description: NF14123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14123_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 62 - 283
Target Start/End: Complemental strand, 8928394 - 8928173
Alignment:
| Q |
62 |
taggggaatgtatcatttgatgctcaagagttgtcaaatccactagggtattccacacctttaactgtgtttttggcttcacttttgttagattctagta |
161 |
Q |
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| T |
8928394 |
taggggaatgtatcatttgatgctcaagagttgtcaaatccactagggtattccacacctttaactgtgtttttggcttcacttttgttagattctagta |
8928295 |
T |
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| Q |
162 |
ggtaattgtgttttactcccttacgttaattttaatgaacatttctgtctcttatatatgtattttttaatgcatgaagaataatattttattacaaaag |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8928294 |
ggtaattgtgttttactcccttacgttaattttaatgaacatttctgtctcttatatatgtattttttaatgcatgaagaataatattttattacaaaag |
8928195 |
T |
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| Q |
262 |
cacaataagccaaagaataatc |
283 |
Q |
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||||||||||||||||| |||| |
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| T |
8928194 |
cacaataagccaaagaagaatc |
8928173 |
T |
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