View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14125_high_4 (Length: 252)

Name: NF14125_high_4
Description: NF14125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14125_high_4
NF14125_high_4
[»] chr4 (39 HSPs)
chr4 (11-234)||(52053898-52054121)
chr4 (49-119)||(21660150-21660220)
chr4 (49-119)||(21668914-21668984)
chr4 (53-120)||(47044716-47044783)
chr4 (53-119)||(17618281-17618347)
chr4 (54-120)||(19238588-19238654)
chr4 (49-119)||(51250528-51250598)
chr4 (55-120)||(9241037-9241102)
chr4 (63-120)||(28635695-28635752)
chr4 (65-121)||(40285621-40285677)
chr4 (53-120)||(37109361-37109428)
chr4 (53-116)||(41346973-41347036)
chr4 (53-112)||(43728402-43728461)
chr4 (54-120)||(13496240-13496306)
chr4 (62-120)||(46545710-46545768)
chr4 (53-119)||(51948480-51948546)
chr4 (53-119)||(55427210-55427276)
chr4 (60-120)||(9936978-9937038)
chr4 (49-115)||(13901746-13901812)
chr4 (53-119)||(24827825-24827891)
chr4 (62-116)||(25869596-25869650)
chr4 (53-119)||(39509070-39509136)
chr4 (66-119)||(12821968-12822021)
chr4 (70-119)||(27965537-27965586)
chr4 (62-119)||(37720233-37720290)
chr4 (65-122)||(56236937-56236994)
chr4 (46-121)||(5795412-5795487)
chr4 (49-120)||(8306484-8306555)
chr4 (60-119)||(12798684-12798743)
chr4 (49-120)||(31826608-31826679)
chr4 (65-120)||(37443701-37443756)
chr4 (49-99)||(15729503-15729552)
chr4 (65-119)||(29195095-29195149)
chr4 (53-99)||(38869788-38869834)
chr4 (53-95)||(43623454-43623496)
chr4 (53-119)||(2622405-2622475)
chr4 (63-120)||(33619205-33619262)
chr4 (54-119)||(49225441-49225506)
chr4 (68-116)||(51346483-51346531)
[»] chr2 (41 HSPs)
chr2 (53-119)||(39714992-39715058)
chr2 (49-120)||(42860347-42860418)
chr2 (53-119)||(29197386-29197452)
chr2 (46-119)||(19016031-19016104)
chr2 (46-119)||(26545840-26545913)
chr2 (46-119)||(34041591-34041664)
chr2 (49-118)||(37755977-37756046)
chr2 (63-115)||(3001383-3001435)
chr2 (53-120)||(28846690-28846757)
chr2 (66-120)||(5147702-5147756)
chr2 (53-119)||(37480075-37480141)
chr2 (53-119)||(42327405-42327471)
chr2 (55-112)||(41202257-41202314)
chr2 (62-118)||(16918597-16918653)
chr2 (60-119)||(7799052-7799111)
chr2 (49-120)||(41908644-41908715)
chr2 (66-117)||(42222883-42222934)
chr2 (62-120)||(4438998-4439056)
chr2 (53-119)||(14500277-14500343)
chr2 (53-119)||(29503271-29503337)
chr2 (67-120)||(32106565-32106618)
chr2 (62-119)||(35916086-35916143)
chr2 (63-120)||(40416410-40416467)
chr2 (66-119)||(42602554-42602607)
chr2 (62-119)||(42922414-42922471)
chr2 (63-119)||(18259730-18259786)
chr2 (49-120)||(12994382-12994453)
chr2 (53-120)||(23052533-23052600)
chr2 (53-116)||(30359657-30359720)
chr2 (53-119)||(1435064-1435130)
chr2 (62-116)||(2311724-2311778)
chr2 (65-111)||(6859334-6859380)
chr2 (62-120)||(16381673-16381731)
chr2 (46-112)||(18372269-18372335)
chr2 (47-112)||(22999229-22999292)
chr2 (62-119)||(1729816-1729873)
chr2 (62-119)||(2295909-2295966)
chr2 (62-115)||(10449026-10449079)
chr2 (46-119)||(11251087-11251160)
chr2 (62-119)||(11738063-11738120)
chr2 (53-101)||(31573651-31573699)
[»] chr1 (54 HSPs)
chr1 (49-119)||(40257399-40257469)
chr1 (49-119)||(12259260-12259330)
chr1 (53-119)||(51814494-51814560)
chr1 (63-112)||(42983394-42983443)
chr1 (53-118)||(44126396-44126461)
chr1 (53-120)||(9165205-9165272)
chr1 (53-120)||(16893393-16893460)
chr1 (65-116)||(24730387-24730438)
chr1 (53-120)||(52116791-52116858)
chr1 (49-119)||(8904414-8904484)
chr1 (46-116)||(9964441-9964511)
chr1 (53-119)||(19528337-19528403)
chr1 (53-119)||(41508831-41508897)
chr1 (62-119)||(16169997-16170054)
chr1 (46-119)||(25297772-25297845)
chr1 (53-117)||(33700783-33700847)
chr1 (53-119)||(2799862-2799928)
chr1 (53-119)||(12662282-12662348)
chr1 (65-119)||(21694446-21694500)
chr1 (66-116)||(26232409-26232459)
chr1 (65-115)||(29817679-29817729)
chr1 (53-118)||(2069657-2069721)
chr1 (62-119)||(8177201-8177258)
chr1 (62-119)||(31794283-31794340)
chr1 (46-99)||(36124853-36124906)
chr1 (62-119)||(36371470-36371527)
chr1 (46-119)||(39714782-39714854)
chr1 (48-101)||(47720848-47720901)
chr1 (48-101)||(47727840-47727893)
chr1 (52-120)||(50901580-50901649)
chr1 (52-120)||(1094524-1094592)
chr1 (53-101)||(12587288-12587336)
chr1 (49-120)||(7743331-7743402)
chr1 (65-120)||(15581163-15581218)
chr1 (53-116)||(15786330-15786393)
chr1 (49-112)||(17410238-17410301)
chr1 (53-120)||(17745266-17745333)
chr1 (69-120)||(38978968-38979019)
chr1 (53-119)||(2074002-2074067)
chr1 (53-119)||(6650595-6650661)
chr1 (62-116)||(8818142-8818196)
chr1 (46-84)||(17439952-17439990)
chr1 (49-115)||(24047108-24047174)
chr1 (49-119)||(37400274-37400344)
chr1 (62-120)||(51703778-51703836)
chr1 (62-119)||(4566548-4566605)
chr1 (49-110)||(30360803-30360864)
chr1 (62-119)||(42412699-42412755)
chr1 (62-99)||(44046167-44046204)
chr1 (71-120)||(48619237-48619286)
chr1 (53-110)||(52029947-52030004)
chr1 (63-108)||(52336794-52336839)
chr1 (46-98)||(12370185-12370236)
chr1 (48-120)||(47753713-47753785)
[»] chr6 (23 HSPs)
chr6 (46-115)||(6776610-6776679)
chr6 (60-119)||(24641207-24641266)
chr6 (49-120)||(13227164-13227235)
chr6 (49-119)||(21418470-21418540)
chr6 (45-119)||(31622993-31623067)
chr6 (53-119)||(33549104-33549170)
chr6 (53-120)||(30127399-30127466)
chr6 (66-117)||(32613163-32613214)
chr6 (53-115)||(10338184-10338246)
chr6 (49-119)||(12188309-12188379)
chr6 (53-119)||(12234517-12234583)
chr6 (49-120)||(3715451-3715522)
chr6 (51-118)||(6758430-6758497)
chr6 (60-121)||(12633007-12633068)
chr6 (60-120)||(9433607-9433667)
chr6 (53-120)||(11423565-11423632)
chr6 (49-96)||(34786460-34786507)
chr6 (63-125)||(32201905-32201967)
chr6 (65-114)||(6691572-6691621)
chr6 (62-119)||(14557962-14558019)
chr6 (64-113)||(34444809-34444858)
chr6 (79-115)||(6663149-6663185)
chr6 (48-76)||(9392170-9392198)
[»] chr7 (52 HSPs)
chr7 (46-119)||(23301605-23301678)
chr7 (53-121)||(48771936-48772004)
chr7 (54-119)||(25590611-25590676)
chr7 (53-120)||(22760862-22760929)
chr7 (46-120)||(18363695-18363769)
chr7 (49-119)||(23552118-23552188)
chr7 (65-122)||(7801177-7801234)
chr7 (62-115)||(23595733-23595786)
chr7 (53-121)||(15137551-15137619)
chr7 (53-120)||(25021345-25021412)
chr7 (53-120)||(26459420-26459487)
chr7 (53-120)||(43590906-43590973)
chr7 (53-119)||(30579335-30579401)
chr7 (52-120)||(3280494-3280562)
chr7 (53-117)||(21854550-21854614)
chr7 (75-119)||(24107302-24107346)
chr7 (60-112)||(33362639-33362691)
chr7 (60-112)||(37085566-37085618)
chr7 (46-121)||(5579237-5579312)
chr7 (53-120)||(24513796-24513863)
chr7 (49-119)||(2446308-2446378)
chr7 (62-120)||(42836020-42836078)
chr7 (53-119)||(45709718-45709784)
chr7 (63-116)||(15905693-15905746)
chr7 (62-119)||(19553454-19553510)
chr7 (63-120)||(37233592-37233649)
chr7 (53-114)||(41519274-41519335)
chr7 (63-116)||(45976943-45976996)
chr7 (53-112)||(3968652-3968711)
chr7 (63-118)||(22927477-22927532)
chr7 (68-119)||(22932736-22932787)
chr7 (49-120)||(29538568-29538639)
chr7 (53-120)||(39631843-39631910)
chr7 (46-117)||(44628186-44628257)
chr7 (53-119)||(17041022-17041088)
chr7 (53-119)||(20335841-20335907)
chr7 (62-112)||(24418160-24418210)
chr7 (53-119)||(27776172-27776238)
chr7 (62-120)||(30442487-30442545)
chr7 (53-119)||(31835192-31835258)
chr7 (66-120)||(33869468-33869522)
chr7 (65-119)||(41487362-41487416)
chr7 (53-119)||(43215184-43215250)
chr7 (62-119)||(5273609-5273666)
chr7 (62-119)||(25655247-25655304)
chr7 (62-115)||(27445000-27445053)
chr7 (62-119)||(35119383-35119440)
chr7 (62-119)||(38374618-38374675)
chr7 (66-119)||(48039670-48039723)
chr7 (53-101)||(8108599-8108647)
chr7 (63-119)||(11720980-11721036)
chr7 (60-116)||(43663112-43663168)
[»] chr3 (50 HSPs)
chr3 (63-119)||(5499427-5499483)
chr3 (46-119)||(31520608-31520681)
chr3 (62-119)||(46518628-46518685)
chr3 (53-112)||(4844521-4844580)
chr3 (53-112)||(4870217-4870276)
chr3 (62-119)||(4222141-4222198)
chr3 (46-119)||(17108901-17108974)
chr3 (53-121)||(2667860-2667928)
chr3 (53-120)||(14339609-14339676)
chr3 (60-119)||(31788987-31789046)
chr3 (60-119)||(36720381-36720440)
chr3 (65-120)||(42430334-42430388)
chr3 (49-119)||(8051214-8051284)
chr3 (53-119)||(10499119-10499185)
chr3 (46-120)||(49494149-49494223)
chr3 (53-118)||(47454627-47454692)
chr3 (53-121)||(35111178-35111246)
chr3 (61-120)||(51903896-51903955)
chr3 (69-119)||(203090-203140)
chr3 (53-119)||(30311306-30311372)
chr3 (46-119)||(8368802-8368875)
chr3 (46-119)||(27093364-27093437)
chr3 (62-94)||(8501592-8501624)
chr3 (53-120)||(10445149-10445217)
chr3 (63-111)||(11612307-11612355)
chr3 (72-120)||(16991541-16991589)
chr3 (53-101)||(29563918-29563966)
chr3 (53-89)||(31608534-31608570)
chr3 (53-116)||(13808895-13808958)
chr3 (53-120)||(14186647-14186713)
chr3 (46-101)||(44069776-44069831)
chr3 (53-119)||(2597230-2597296)
chr3 (63-121)||(12761510-12761568)
chr3 (53-119)||(15048071-15048137)
chr3 (62-120)||(19341800-19341858)
chr3 (53-119)||(21960551-21960617)
chr3 (61-119)||(26988996-26989053)
chr3 (62-116)||(28928898-28928952)
chr3 (53-119)||(37788475-37788541)
chr3 (62-120)||(40286876-40286934)
chr3 (62-119)||(7975418-7975475)
chr3 (62-119)||(16354911-16354968)
chr3 (62-119)||(26481927-26481984)
chr3 (62-119)||(27923062-27923119)
chr3 (62-119)||(30232330-30232387)
chr3 (53-121)||(8170670-8170738)
chr3 (64-120)||(31510739-31510795)
chr3 (65-117)||(42799769-42799821)
chr3 (53-89)||(44743865-44743901)
chr3 (62-122)||(51766893-51766952)
[»] chr5 (27 HSPs)
chr5 (53-120)||(14495815-14495882)
chr5 (53-119)||(16773807-16773873)
chr5 (53-119)||(21589288-21589354)
chr5 (53-119)||(30109318-30109384)
chr5 (60-120)||(29075780-29075840)
chr5 (53-112)||(1410669-1410728)
chr5 (46-120)||(8278278-8278352)
chr5 (49-119)||(21549143-21549213)
chr5 (53-119)||(22020872-22020938)
chr5 (49-119)||(30883204-30883274)
chr5 (46-119)||(87426-87499)
chr5 (55-120)||(6844728-6844793)
chr5 (60-120)||(19949633-19949692)
chr5 (48-119)||(29692391-29692462)
chr5 (53-108)||(43442207-43442262)
chr5 (53-119)||(16457810-16457876)
chr5 (53-119)||(36958132-36958198)
chr5 (68-121)||(636596-636649)
chr5 (63-115)||(24652872-24652924)
chr5 (73-120)||(3252319-3252366)
chr5 (53-120)||(25627056-25627123)
chr5 (65-119)||(26598524-26598578)
chr5 (62-119)||(34984806-34984863)
chr5 (46-99)||(37148046-37148099)
chr5 (63-120)||(40281112-40281169)
chr5 (49-89)||(84854-84894)
chr5 (60-116)||(15641809-15641865)
[»] chr8 (37 HSPs)
chr8 (53-119)||(28783060-28783126)
chr8 (53-119)||(35641911-35641977)
chr8 (53-120)||(23361659-23361726)
chr8 (53-119)||(968362-968428)
chr8 (53-119)||(16852340-16852406)
chr8 (55-116)||(11492085-11492146)
chr8 (64-119)||(20994479-20994534)
chr8 (53-118)||(29858059-29858124)
chr8 (53-117)||(2203494-2203558)
chr8 (62-120)||(1766948-1767006)
chr8 (53-119)||(4830487-4830553)
chr8 (53-119)||(5264544-5264610)
chr8 (49-119)||(5801047-5801117)
chr8 (53-119)||(19703497-19703563)
chr8 (53-119)||(26688865-26688931)
chr8 (62-120)||(35287715-35287773)
chr8 (62-119)||(30483903-30483960)
chr8 (62-119)||(32157191-32157248)
chr8 (46-119)||(44780117-44780190)
chr8 (65-117)||(3624582-3624634)
chr8 (63-119)||(6569791-6569847)
chr8 (63-119)||(29431011-29431067)
chr8 (65-120)||(6530806-6530861)
chr8 (53-120)||(23874392-23874459)
chr8 (53-116)||(36205198-36205261)
chr8 (65-120)||(40872875-40872930)
chr8 (64-127)||(43969019-43969082)
chr8 (53-119)||(8059632-8059698)
chr8 (65-119)||(8484999-8485053)
chr8 (53-119)||(18540298-18540364)
chr8 (46-116)||(34966853-34966923)
chr8 (60-101)||(7140727-7140768)
chr8 (66-119)||(14254727-14254780)
chr8 (46-119)||(22268937-22269009)
chr8 (63-120)||(35826310-35826367)
chr8 (63-119)||(28750571-28750626)
chr8 (63-119)||(31381356-31381412)
[»] scaffold0118 (1 HSPs)
scaffold0118 (53-120)||(41643-41710)
[»] scaffold0258 (1 HSPs)
scaffold0258 (53-119)||(15333-15399)
[»] scaffold0194 (1 HSPs)
scaffold0194 (53-115)||(13056-13118)
[»] scaffold0299 (1 HSPs)
scaffold0299 (53-113)||(11534-11594)
[»] scaffold0009 (1 HSPs)
scaffold0009 (49-120)||(19853-19924)
[»] scaffold1367 (1 HSPs)
scaffold1367 (53-113)||(850-910)
[»] scaffold0021 (1 HSPs)
scaffold0021 (60-112)||(157004-157056)
[»] scaffold0417 (1 HSPs)
scaffold0417 (46-119)||(10219-10292)
[»] scaffold0172 (2 HSPs)
scaffold0172 (46-119)||(15780-15853)
scaffold0172 (62-119)||(32788-32845)
[»] scaffold0070 (1 HSPs)
scaffold0070 (62-119)||(42539-42596)
[»] scaffold0187 (2 HSPs)
scaffold0187 (49-120)||(12428-12499)
scaffold0187 (49-120)||(22756-22827)
[»] scaffold0002 (1 HSPs)
scaffold0002 (53-116)||(94981-95044)
[»] scaffold0517 (1 HSPs)
scaffold0517 (49-119)||(7732-7802)
[»] scaffold0032 (1 HSPs)
scaffold0032 (65-119)||(112282-112336)


Alignment Details
Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 11 - 234
Target Start/End: Complemental strand, 52054121 - 52053898
Alignment:
Q  11 atcatcaacacttaattgtaacatatacaaaactttcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaaccc 110  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||| | || | |||||||||||||| |||||||||| |||| | |||||||    
T  52054121 atcatcaacacttcattataacatatacaaaactttcgaacttgagacatcgggaagaaacacactcccagatc-caagtcaatatcaccgtaccaaccc 52054023  T
Q  111 aagtgggttagattacgacccc-ttattagatattatataatctatgaaataaaccaaataaaagactatgcaatctatattggttttaattcaaagaga 209  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52054022 aagtgggttagattacgacccccttattagatattatataatctatgaaataaaccaaataaaagactatgcaatctatattggttttaattcaaagaga 52053923  T
Q  210 catgtagtctagcctgtgcactttt 234  Q
    |||||||||||||||||||||||||    
T  52053922 catgtagtctagcctgtgcactttt 52053898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 21660150 - 21660220
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  21660150 aacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 21668914 - 21668984
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  21668914 aacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 47044783 - 47044716
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| ||||||||||||| |||| |||||| |||||||||||||||| ||||| ||||||||||||    
T  47044783 tgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtta 47044716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 17618347 - 17618281
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||| |||  ||||||||||||    
T  17618347 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 19238588 - 19238654
Alignment:
Q  54 gagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||| |||||||||||||||||||||  || |||| ||||||||||| ||||||||||||||||||    
T  19238588 gagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 51250528 - 51250598
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||  | |||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  51250528 aacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 9241037 - 9241102
Alignment:
Q  55 agacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||| ||||| ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtta 9241102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 28635752 - 28635695
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||    
T  28635752 aggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtta 28635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 40285677 - 40285621
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||    
T  40285677 gaggagcacactcccagattccaaatcaataccaccatgccaactcaagtgggttag 40285621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 37109361 - 37109428
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||||||||||||||||| || |||| ||||||||| | ||||||||||||||||||    
T  37109361 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 41346973 - 41347036
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| ||||||||||||| |||||||||||||||  |||||||| || ||||||||||||||    
T  41346973 tgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 43728461 - 43728402
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||| | |||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  43728461 tgagactttgaggaggagcacactcccagatcataagtcaataccaccataccaacccaa 43728402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 13496306 - 13496240
Alignment:
Q  54 gagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||| |||| ||||| ||||||| ||  || |||||||||||||||||||||||||||||||||||    
T  13496306 gagacctcgaagaggaacacactcacatgtcccaagtcaataccaccatgccaacccaagtgggtta 13496240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 46545768 - 46545710
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||| ||| ||||||| ||||||||| | ||||||||||||||||||    
T  46545768 gaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtta 46545710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 51948546 - 51948480
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| ||||||||| ||||||||| ||||| ||||||||||| |||| | |||||||||||||||    
T  51948546 tgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 55427210 - 55427276
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| ||||| ||||||| |||||||| || |||| ||||||||||| |||||||||||||||||    
T  55427210 tgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 9936978 - 9937038
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||||||||  ||||||||| ||||||| | |||||||||||| |||||    
T  9936978 tcgaggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtta 9937038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 13901812 - 13901746
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    |||||||||| || ||||||| ||||||||||| ||||||| ||||||||| |  ||||||||||||    
T  13901812 aacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 24827891 - 24827825
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||| ||||||||| || |||||||||||||||   |||||| |||||||||    
T  24827891 tgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggtt 24827825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 25869596 - 25869650
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||||||||||||| |||||||||||||||||||| ||  | |||||||||||    
T  25869596 gaggaggagcacactctcagatctcaagtcaataccatcaaactaacccaagtgg 25869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 39509136 - 39509070
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| ||||||||||||||||||||||||| |||| || |||||  |  ||||||||||||||||    
T  39509136 tgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 12822021 - 12821968
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||| |||||||||| |||||  ||||||| ||||||||    
T  12822021 aggagcacactcccagatcccaagtcaatatcaccaaaccaaccctagtgggtt 12821968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 27965537 - 27965586
Alignment:
Q  70 gcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||| |||| ||||||||| | |||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 37720233 - 37720290
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||| |||||||||||| || |||| ||||| ||||| |||||||||||||||||    
T  37720233 gaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 56236937 - 56236994
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttaga 122  Q
    |||||||||||||||| ||| ||||||||||||||||  |||||| || |||||||||    
T  56236937 gaggagcacactcccatatcccaagtcaataccaccagaccaacctaattgggttaga 56236994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 5795412 - 5795487
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| |||||| | ||||||||||| ||||| || |  |||||||| |||||||  ||||||||||||||||||    
T  5795412 tcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggttag 5795487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 8306555 - 8306484
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||| |||| |||||||||||||||||||||| ||||||| | || ||| ||  ||||| |||||||||||    
T  8306555 aacttaagacttcgaggaggagcacactcccaggtctcaagccgatgccaacagaccaactcaagtgggtta 8306484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 12798743 - 12798684
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| ||||||||||||||||||||  |||||||||   | |||||||||||||||    
T  12798743 tcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtt 12798684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 31826679 - 31826608
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| | |||||||||||||||| || ||| |||| | ||||||| | | ||||||||||||||||    
T  31826679 aacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtta 31826608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 37443756 - 37443701
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| ||||||||||||| |||| ||||||||| | | ||||||||||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtta 37443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 15729552 - 15729503
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccac 99  Q
    ||||||||||||||||||||||||||||| || |||||||  |||||||||    
T  15729552 aacttgagacatcgaggaggagcacactctca-atctcaaaccaataccac 15729503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 29195149 - 29195095
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||| || || |||| ||| ||||||| |||||||||||||||||    
T  29195149 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 29195095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 38869834 - 38869788
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccac 99  Q
    |||||| | ||||||||||||||||||||||| |||| |||||||||    
T  38869834 tgagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 43623454 - 43623496
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaata 95  Q
    |||||| || ||||||||||||||||| |||||||||||||||    
T  43623454 tgagacttcaaggaggagcacactccctgatctcaagtcaata 43623496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 2622405 - 2622475
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaag----tcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| |||||||||||||||||||| || ||||    | |||||||| | |||||||||||||||||    
T  2622405 tgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 33619262 - 33619205
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| ||| ||||||||||  ||| ||||||||||| | ||||||||||||||||    
T  33619262 aggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtta 33619205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 49225441 - 49225506
Alignment:
Q  54 gagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| |||||||||| |||  || ||| ||| |||||||  ||||||||||||||||    
T  49225441 gagacatcgaggaagagcacactctcaggccttaagccaacaccaccagaccaacccaagtgggtt 49225506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 51346483 - 51346531
Alignment:
Q  68 gagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||||||| || ||||||||||||||||  || ||||||||||||||    
T  51346483 gagcacactctcaaatctcaagtcaataccgtcaggccaacccaagtgg 51346531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 39715058 - 39714992
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  39715058 tgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 42860418 - 42860347
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||| |||||    
T  42860418 aacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtta 42860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 29197386 - 29197452
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||| ||||||||||||||||||  || |||||||||||||||| |||||||||||||||||    
T  29197386 tgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 19016104 - 19016031
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| |||||||||||||||||||||  ||||||| |||||||| ||  ||||||||||||||||    
T  19016104 tcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 26545913 - 26545840
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| ||||| ||||||||||| ||||||| ||||  ||||||||||  ||||||||||||||||    
T  26545913 tcaaacttgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaacccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 34041591 - 34041664
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| | |||||||||||||||| ||||||  ||||||||||||| | |||||||||||||||||    
T  34041591 tcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 37755977 - 37756046
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    |||||||||| ||||| ||||||||| |||||| || |||| ||||||||||| ||||||||||||||||    
T  37755977 aacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 3001435 - 3001383
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  3001435 aggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 28846757 - 28846690
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||||||||||||||||| || |||||||||||||| |   ||||| ||||||||||    
T  28846757 tgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 5147702 - 5147756
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| |||||||||||||||||||||||||| |  |||||||||||||||||    
T  5147702 aggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtta 5147756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 37480141 - 37480075
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||| ||| || |||| ||||||||||| |||||||||||||||||    
T  37480141 tgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 42327405 - 42327471
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||||||| || |||| ||||||||| | |||||||||||||||||    
T  42327405 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 41202314 - 41202257
Alignment:
Q  55 agacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||  |||||||||    
T  41202314 agacttcgaggaggagcatactcccagatctcaggtcaataccaccagaccaacccaa 41202257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 16918597 - 16918653
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    ||||||||||||||||||||||| |||  ||||||||| | ||||||||||||||||    
T  16918597 gaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 7799052 - 7799111
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||||  || |||| ||||||||||| | |||||||||||||||    
T  7799052 tcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 41908644 - 41908715
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| | ||||||||||||||||| || ||||||  | | ||||||| ||||||||||||||||||    
T  41908644 aacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgggtta 41908715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 42222934 - 42222883
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||| ||||    
T  42222934 aggagcacacttccatatctcaggtcaataccaccatgccaacccaaatggg 42222883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 4438998 - 4439056
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||| |||||| ||||| |||||||  | ||||||||||||||||||    
T  4438998 gaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtta 4439056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 14500343 - 14500277
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||||||||||||||   ||||||| | ||||| |||||||||||    
T  14500343 tgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 29503337 - 29503271
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||||||| || |||  ||||||||| | |||||||||||||||||    
T  29503337 tgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 32106618 - 32106565
Alignment:
Q  67 ggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||| || || |||||||| ||||||| ||||||||||||||||||    
T  32106618 ggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtta 32106565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 35916143 - 35916086
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| |||||||  | ||||||||||||||||||||  ||||||||||||||||    
T  35916143 gaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtgggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 40416410 - 40416467
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| |||||||| |  |||||||||||||| | ||||||||||||||||||    
T  40416410 aggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 42602607 - 42602554
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||| || |||| ||||||||| | |||||||||||||||||    
T  42602607 aggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 42922471 - 42922414
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||| |  |||| ||||||||| | |||||||||||||||||    
T  42922471 gaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 18259786 - 18259730
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||| || |||||||| ||||||||||| |||||| ||| ||||||    
T  18259786 aggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 12994382 - 12994453
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| |  ||||||||||||||||||| || |||||||||||||| |  ||||| |||| ||||||    
T  12994382 aacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtta 12994453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 23052533 - 23052600
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||| ||||||||||||  || |||| ||||||||||| ||||||| ||||||||||    
T  23052533 tgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtta 23052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 30359720 - 30359657
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| | ||||||||||||||||| || || |||| ||| ||||||| ||||||||||||||    
T  30359720 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 1435130 - 1435064
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||| |||||||||| | ||| |||| || |||||| |||||||||||||||||||    
T  1435130 tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 2311778 - 2311724
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    ||||||||| |||||||||||||||||| |||||||| || | ||||| ||||||    
T  2311778 gaggaggagtacactcccagatctcaagccaataccaacaagtcaacctaagtgg 2311724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 6859334 - 6859380
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaaccca 111  Q
    |||||||||||||||| ||| |||||||||| ||| |||||||||||    
T  6859334 gaggagcacactcccatatcacaagtcaatatcactatgccaaccca 6859380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 16381673 - 16381731
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||| |||||| |||||| |||| | ||||||| | ||||||||||||||||||    
T  16381673 gaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtta 16381731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 18372335 - 18372269
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||| | |||| ||||||| ||||| |||| ||| |||||||||||||||| |||||||| ||||    
T  18372335 tcaaacctaagacctcgaggatgagcatactctcaggtctcaagtcaataccatcatgccaatccaa 18372269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 22999292 - 22999229
Alignment:
Q  47 caaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||||||||| | ||||||||||||  |||||| ||  ||||||||||||| ||||||||||||    
T  22999292 caaacttgagaccttgaggaggagcac--tcccaggtccaaagtcaataccacaatgccaacccaa 22999229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 1729873 - 1729816
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||  || |||| ||||||||| |  ||||||||||||||||    
T  1729873 gaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 2295966 - 2295909
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||| |||||||||||||||||| |||||||| ||   ||||| |||||||||    
T  2295966 gaggaggagtacactcccagatctcaagccaataccaacaaatcaacctaagtgggtt 2295909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 10449079 - 10449026
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    ||||||||||||||||| ||||| |||||||||| || |||| ||| |||||||    
T  10449079 gaggaggagcacactcctagatcacaagtcaatatcatcatgtcaatccaagtg 10449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 11251160 - 11251087
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| | ||||||||||||||| |||  || |||| ||||||||| | ||||||| |||||||||    
T  11251160 tcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 11738063 - 11738120
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| ||||||| |||||||| |||||||||||| |  ||||| ||||||||||    
T  11738063 gaggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggtt 11738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 31573651 - 31573699
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    ||||||||| ||||||||||||||| ||||||||||  ||||| |||||    
T  31573651 tgagacatcaaggaggagcacactctcagatctcaaaccaatatcacca 31573699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 40257469 - 40257399
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  40257469 aacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 12259330 - 12259260
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| ||||||||||||||||||||| ||| ||||| |||| ||| |||||||||||||||||||    
T  12259330 aacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 51814560 - 51814494
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  51814560 tgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 42983394 - 42983443
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42983394 aggaggaccacactcccagatctcaagtcaataccaccatgccaacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 44126461 - 44126396
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    |||||| ||| |||||||||||||||||| || || ||||||||||||| ||||||||||||||||    
T  44126461 tgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 9165205 - 9165272
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||||||||||||||||| || |||| ||||||||| | ||||||||||||||||||    
T  9165205 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 9165272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 16893460 - 16893393
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||| || | ||||||||||||||||    
T  16893460 tgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtta 16893393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 24730438 - 24730387
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  24730438 gaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 52116791 - 52116858
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||| |||||||||||||||||||  || |||| ||||||||||| |||||||||| |||||||    
T  52116791 tgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtta 52116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 8904484 - 8904414
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| | |||||||||||||||| || ||| ||||||||||| || | |||||||||||||||||    
T  8904484 aacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 9964511 - 9964441
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| |||||||| ||||| ||||||||||||||||| |||||||||| || || || |||||||||||    
T  9964511 tcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 19528337 - 19528403
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||  ||||| |||| ||||||||||| |||||||||||||||||    
T  19528337 tgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 41508897 - 41508831
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||||||||| |||  || |||||||| |||||||||||||||||    
T  41508897 tgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 16169997 - 16170054
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| ||||||||||| || |||||||||||||||| || ||||||||||||||    
T  16169997 gaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 25297845 - 25297772
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||| |||||||||||||||||| ||||||  ||||||||||||| |  ||||||||||||||||    
T  25297845 tcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 33700783 - 33700847
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    |||||| | ||||||||||||||||||||||  |||| ||||||||| | |||||||||||||||    
T  33700783 tgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 2799928 - 2799862
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||||||||||||||| | ||||||| | ||||| | |||||||||    
T  2799928 tgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 12662348 - 12662282
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||||||| ||  ||| ||||||||||||| ||  ||||||||||| ||||    
T  12662348 tgagacatcgaggaggagcacacttccgtatcacaagtcaataccatcagaccaacccaagtaggtt 12662282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 21694500 - 21694446
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||  ||||||| ||||||||||| | |||||||||||||||    
T  21694500 gaggagcacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 26232409 - 26232459
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||||||||||||||||||||| ||||||||| |  |||||||||||||    
T  26232409 aggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 29817729 - 29817679
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    ||||||||||||| ||| ||||||||||||| ||||| |||||||||||||    
T  29817729 gaggagcacactctcaggtctcaagtcaatatcaccaggccaacccaagtg 29817679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 2069721 - 2069657
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||| |||| |||||||||| |||||    
T  2069721 tgagacttcgaggaggagcaca-tgccagatcccaagtcaatacaaccaggccaacccaaatgggt 2069657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 8177201 - 8177258
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||||| |||| ||||||||| | |||||| ||| ||||||    
T  8177201 gaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 31794283 - 31794340
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||  || |||| ||||||||| | |||||||||||||||||    
T  31794283 gaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 36124906 - 36124853
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccac 99  Q
    ||||||||||||| || ||||||||||||||| ||| || ||||||||||||||    
T  36124906 tcaaacttgagacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 36371527 - 36371470
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||| |  |||| ||||||||| | |||||||||||||||||    
T  36371527 gaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 39714782 - 39714854
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| | ||| ||||||||||||| ||||| |||| |||  |||| |||||||||||||||||||    
T  39714782 tcaaacttgagaccttgag-aggagcacactccaagatcccaagccaacgccactatgccaacccaagtgggtt 39714854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 47720901 - 47720848
Alignment:
Q  48 aaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||| |||||| | ||||||||||||||||| | ||||||||||||||||||||    
T  47720901 aaacctgagactttgaggaggagcacactcctatatctcaagtcaataccacca 47720848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 47727893 - 47727840
Alignment:
Q  48 aaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||| |||||| | ||||||||||||||||| | ||||||||||||||||||||    
T  47727893 aaacctgagactttgaggaggagcacactcctatatctcaagtcaataccacca 47727840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 50901649 - 50901580
Alignment:
Q  52 ttgagacatcgaggaggagcacactcccagatctcaagtcaa-taccaccatgccaacccaagtgggtta 120  Q
    ||||||| ||||||||||||||||| |||| || |||| ||| |||||| | ||||||||||||||||||    
T  50901649 ttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 1094592 - 1094524
Alignment:
Q  52 ttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| ||| |||||||||||||| ||| |  ||||||||||||| ||  |||||||||||||||||    
T  1094592 ttgagacctcgtggaggagcacactcacaggttccaagtcaataccaacaaaccaacccaagtgggtta 1094524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 12587336 - 12587288
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||||| |||||||||||||||||| |||||| |||||||||| |||||    
T  12587336 tgagacctcgaggaggagcacactcacagatcccaagtcaatatcacca 12587288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 7743331 - 7743402
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| | |||||||| |||||||||| ||  | ||| |||||||| | ||||||||||||||||||    
T  7743331 aacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggtta 7743402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 15581163 - 15581218
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||| || || |||| ||| ||||||| ||||||||||||||||||    
T  15581163 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtta 15581218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 15786330 - 15786393
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| | ||||||||||||||||||||||| |||| |||||| || |  |||||||||||||    
T  15786330 tgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 17410301 - 17410238
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||||||  |||||||||| |||||||||||||| |||  ||||||||| | ||||||||||    
T  17410301 aacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 17745266 - 17745333
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| |||||||||||||||| | ||| || |||| ||||||||| | ||||||||||||| ||||    
T  17745266 tgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtgcgtta 17745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 38978968 - 38979019
Alignment:
Q  69 agcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| || ||||||||||||||||| | |||||||||| |||||||    
T  38978968 agcacactcctaggtctcaagtcaataccactaggccaacccaaatgggtta 38979019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 2074067 - 2074002
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||| |  ||||| ||||||||||| |||| |||||||||| ||||||    
T  2074067 tgagacttcgaggaggagcacacgct-agatcccaagtcaatacaaccaggccaacccaaatgggtt 2074002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 6650661 - 6650595
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| ||||||||||| |||||| |||| |||| ||||||||| | ||||||| || ||||||    
T  6650661 tgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 8818142 - 8818196
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| ||||||||||||| || ||||||||||||| || | ||||||||||||    
T  8818142 gaggagaagcacactcccaggtcacaagtcaataccatcaggtcaacccaagtgg 8818196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 17439990 - 17439952
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatc 84  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  17439990 tcaaacatgagacctcgaggaggagcacactcccagatc 17439952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 24047108 - 24047174
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    ||||||| || |||||||||||||||||||||  ||||||| ||||||||  |  ||||||||||||    
T  24047108 aacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccatgagaccaacccaagtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 37400344 - 37400274
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| |  ||||||||||||||  ||| ||||||| |||||||||||  ||||||||||| ||||    
T  37400344 aacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 51703836 - 51703778
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||||||||||  |||| ||||||||| |  ||||||||| |||||||    
T  51703836 gaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtta 51703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 4566605 - 4566548
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||| |  |||| ||||| ||| | |||||||||||||||||    
T  4566605 gaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 30360864 - 30360803
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaaccc 110  Q
    |||||||||  | ||| ||||||||||||||  |||||||||||||||||||| || |||||    
T  30360864 aacttgagatcttgagtaggagcacactccctaatctcaagtcaataccaccaagcaaaccc 30360803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 42412699 - 42412755
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||| |||||||||||||||||||||| | ||||||||  |||||||||||| ||||    
T  42412699 gaggaagagcacactcccagatctcaag-ccataccaccgggccaacccaagttggtt 42412755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 44046167 - 44046204
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccac 99  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  44046167 gaggaggagcacactcccagatcccaagccaataccac 44046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 48619237 - 48619286
Alignment:
Q  71 cacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||  ||||||||||||||||||||  ||||| ||||||||||    
T  48619237 cacactcccaagtctcaagtcaataccaccatatcaacctaagtgggtta 48619286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 52029947 - 52030004
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaaccc 110  Q
    |||||| | ||| ||||||||||||| || ||||||||||||||||||  ||||||||    
T  52029947 tgagaccttgagaaggagcacactcctaggtctcaagtcaataccacctagccaaccc 52030004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 52336794 - 52336839
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaac 108  Q
    |||||||||||||||||||||| |||| ||||||||| | ||||||    
T  52336794 aggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 12370236 - 12370185
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaatacca 98  Q
    |||||| |||||| |||||||||||||||||||||| || |||| ||||||||    
T  12370236 tcaaacatgagacctcgaggaggagcacactcccaggtcccaag-caatacca 12370185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 47753785 - 47753713
Alignment:
Q  48 aaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||| |||||| | ||||||||||||| ||| ||||| ||||||||||| |||| | ||||| || |||||||    
T  47753785 aaacctgagaccttgaggaggagcacagtcctagatcccaagtcaatacgaccaggtcaacctaaatgggtta 47753713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 6776610 - 6776679
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||    
T  6776610 tcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 24641207 - 24641266
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  24641207 tcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 13227164 - 13227235
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| ||||||||||||||||||||||||||||   |||||||||   ||||||||||||||||||    
T  13227164 aacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtta 13227235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 21418540 - 21418470
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||| |||||||||||||||||||  || |||| ||||||||||| |||||||||| ||||||    
T  21418540 aacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 31622993 - 31623067
Alignment:
Q  45 ttcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||| |||||| |||||||||||||||||||||| || |||| ||||||||||   ||||||||||||||||    
T  31622993 ttcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 33549170 - 33549104
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| || |||| |||||||||||  ||||||||||||||||    
T  33549170 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 30127466 - 30127399
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| |||| |||||||||||||||||| | |||| |||||||||||  |||||||||||||||||    
T  30127466 tgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 32613163 - 32613214
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  32613163 aggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 10338184 - 10338246
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    |||||| | ||||||||||||||||| || || |||| |||||||||||||||||||||||||    
T  10338184 tgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 12188309 - 12188379
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||| || | |||||||||||||||||||| || |||| ||||||||| | |||||||||||||||||    
T  12188309 aacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 12234517 - 12234583
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||  ||||||||||||||| || |||||||||||||||| ||||||| |||||||||    
T  12234517 tgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 3715522 - 3715451
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| |||| ||| |||| |||||||||||||||||||||||||| |  |||||| || |||||||    
T  3715522 aacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcccaaccaaaatgggtta 3715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 6758430 - 6758497
Alignment:
Q  51 cttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    |||||||| |||||| |||||||||||||| |||  ||| ||||||||||| |||||| |||||||||    
T  6758430 cttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 12633068 - 12633007
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||| |||||||||||||||| ||| |||||||||| ||||  | |||||||||||||||||    
T  12633068 tcgaagaggagcacactcccaaatcccaagtcaatatcaccgggacaacccaagtgggttag 12633007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 9433607 - 9433667
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| ||||||||||||||||| ||||||||||||||   | ||| ||||||||||||    
T  9433607 tcgaggaagagcacactcccagatcccaagtcaataccacagggtcaatccaagtgggtta 9433667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 11423632 - 11423565
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| |||||||| |||| ||||||| ||| ||||||||||||||||  ||| |||||| ||||||    
T  11423632 tgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtta 11423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 34786460 - 34786507
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaatac 96  Q
    |||||||||| ||||| ||||||||||||||||||| |||| ||||||    
T  34786460 aacttgagacttcgagaaggagcacactcccagatcccaagccaatac 34786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 32201905 - 32201967
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttagatta 125  Q
    |||||||||||||||  ||||| |||| ||||||||||| | |||||||| ||||||| ||||    
T  32201905 aggaggagcacactctgagatcccaagccaataccaccaagtcaacccaaatgggttaaatta 32201967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 6691572 - 6691621
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagt 114  Q
    |||||||||||||| || ||| ||||||| ||||||| ||||||||||||    
T  6691572 gaggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagt 6691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 14558019 - 14557962
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||| |||| || |||| ||| |||||||  ||||||||||||||||    
T  14558019 gaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 34444858 - 34444809
Alignment:
Q  64 ggaggagcacactcccagatctcaagtcaataccaccatgccaacccaag 113  Q
    ||||||||||||||  || || |||||||||||||||| |||||||||||    
T  34444858 ggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 6663149 - 6663185
Alignment:
Q  79 cagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  6663149 cagatctcaagccaataccactatgccaacccaagtg 6663185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 9392170 - 9392198
Alignment:
Q  48 aaacttgagacatcgaggaggagcacact 76  Q
    |||||||||||||||||||||||||||||    
T  9392170 aaacttgagacatcgaggaggagcacact 9392198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 23301605 - 23301678
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| || ||||||||||||||||||  || |||||||||||||||| |||||||||||||||||    
T  23301605 tcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 48772004 - 48771936
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| || |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  48772004 tgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggttag 48771936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 25590676 - 25590611
Alignment:
Q  54 gagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| || | |||||||||||||||    
T  25590676 gagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 22760929 - 22760862
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||    
T  22760929 tgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 18363769 - 18363695
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| |||||| | ||||||||||||||||||| |||||||| | ||||||| | ||||||||||||||||||    
T  18363769 tcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtta 18363695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 23552188 - 23552118
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| | |||||||||||||||||||| || |||||||||| ||| | |||||||||||||||||    
T  23552188 aacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 7801234 - 7801177
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttaga 122  Q
    ||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||    
T  7801234 gaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggttaga 7801177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 23595786 - 23595733
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  23595786 gaggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtg 23595733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 15137619 - 15137551
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| | ||||||||||||||||| | ||| ||||||| |||||||| |||||||||||||||||||    
T  15137619 tgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggttag 15137551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 25021345 - 25021412
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||||||||||||||||| || |||| ||||||||| | ||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 26459420 - 26459487
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||||||||||||||||| || |||| ||||||||| | ||||||||||||||||||    
T  26459420 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 43590973 - 43590906
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||| |||||||||||||||||||  || |||| ||||||||||| |||||||||| |||||||    
T  43590973 tgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtta 43590906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 30579401 - 30579335
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||| | |||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  30579401 tgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 3280494 - 3280562
Alignment:
Q  52 ttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| | |||||||||||||||| | | || |||| ||||||||||||| ||||||||||||||||    
T  3280494 ttgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggtta 3280562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 21854614 - 21854550
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    |||||| | ||||||||||||||||||||||| | || |||||||| || |||||||||||||||    
T  21854614 tgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 24107346 - 24107302
Alignment:
Q  75 ctcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||    
T  24107346 ctcccagatctcaagtcaatatcactatgccaacccaagtgggtt 24107302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 33362691 - 33362639
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    ||||||||||||||| || || ||||||||||||||||||||| |||||||||    
T  33362691 tcgaggaggagcacattctcaaatctcaagtcaataccaccataccaacccaa 33362639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 37085566 - 37085618
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    ||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  37085566 tcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 5579237 - 5579312
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| |||||| | ||||||||||||||||| || || |||| ||| ||||||| | |||||||||||||||||    
T  5579237 tcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggttag 5579312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 24513863 - 24513796
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| || ||||| || ||||||||| |||||||| ||||||||| | ||||||||||||||||||    
T  24513863 tgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtta 24513796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 2446378 - 2446308
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||  |||||||||||||||||||||  || |||| |||||||| ||  ||||||||||||||||    
T  2446378 aacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 42836020 - 42836078
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||| |||||||||||||| || |||| ||||||||| | ||||||||||||||||||    
T  42836020 gaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 42836078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 45709718 - 45709784
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||| |||||| ||||  |||||||| | |||||||||| ||||||    
T  45709718 tgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 15905693 - 15905746
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    ||||||||||||||||||| || |||| ||||||| ||| ||||||||||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 19553510 - 19553454
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||| || |||| ||||||||||| ||||||||||| |||||    
T  19553510 gaggaggagcacactcccaggtc-caagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 37233592 - 37233649
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||||| ||| |||| ||||| ||||| | ||||||||||||||||    
T  37233592 aggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtta 37233649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 41519274 - 41519335
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagt 114  Q
    |||||| | ||||||||||||||||| | ||| |||||||||||||| | ||||||||||||    
T  41519274 tgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 45976943 - 45976996
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    ||||||||||||||||||| || |||| ||||||||| | ||||||||||||||    
T  45976943 aggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 3968652 - 3968711
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||| | ||||||||||||||||  || || |||||||| ||||||||||||||||||    
T  3968652 tgagaccttgaggaggagcacactcgaaggtcccaagtcaacaccaccatgccaacccaa 3968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 22927532 - 22927477
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    ||||| |||||||||| ||||| ||||| |||||||| | ||||||||||||||||    
T  22927532 aggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 22932736 - 22932787
Alignment:
Q  68 gagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||| ||||||||| || |||| |||||||||||| ||||||||||||||||    
T  22932736 gagcgcactcccaggtcccaagccaataccaccataccaacccaagtgggtt 22932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 29538568 - 29538639
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| | ||| ||||| | ||||| |  ||||||||||| ||||| ||||||||||||||||||||    
T  29538568 aacttgagaccttgagaaggagtatactccaatgtctcaagtcaacaccacaatgccaacccaagtgggtta 29538639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 39631910 - 39631843
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | ||||||||||  |||||||| || |||| ||||||||| | ||||||||||||||||||    
T  39631910 tgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtta 39631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 44628186 - 44628257
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    ||||||||||||| | ||||||||||||||||| || || ||||  || | ||||| |||||||||||||||    
T  44628186 tcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggccaacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 17041022 - 17041088
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||| ||||||| |||| |||| |||| |  ||||||||||||||||    
T  17041022 tgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 20335841 - 20335907
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||  || |||| ||||||| | |  ||||||||||||||||    
T  20335841 tgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 24418160 - 24418210
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    ||||||||||||||||  || |||||||||||||| ||||||| |||||||    
T  24418160 gaggaggagcacactcttaggtctcaagtcaatactaccatgctaacccaa 24418210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 27776238 - 27776172
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||| ||  || ||||   ||||||||| |||||||||||||||||    
T  27776238 tgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 30442545 - 30442487
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||| |||||||| || |||| |||||||||   ||||||||||||||||||    
T  30442545 gaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 31835258 - 31835192
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||| ||  | |||| ||| ||||||| |||||||||||||||||    
T  31835258 tgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 33869468 - 33869522
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||| |||| ||||||| |||||| || | ||||||||||||||||||    
T  33869468 aggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtta 33869522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 41487416 - 41487362
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||  || |||| ||||||||||| |||||||||||||||||    
T  41487416 gaggagaacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 43215250 - 43215184
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||| || || |||| ||||||||| |  ||||||||||||||||    
T  43215250 tgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 5273609 - 5273666
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||  || || |||| ||| ||||||| |||||||||||||||||    
T  5273609 gaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 25655247 - 25655304
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| ||||||| |||||| |||||||||||||| |  |||||||| |||||||    
T  25655247 gaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 27445053 - 27445000
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    |||||||||||||||| | | || ||||||||||||| |||| |||||||||||    
T  27445053 gaggaggagcacactctctggtcccaagtcaataccatcatgtcaacccaagtg 27445000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 35119440 - 35119383
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||| ||||| || |||||||| |||||||||||||| | |||||||||| ||||||    
T  35119440 gaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 38374618 - 38374675
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||  || || |||| ||| ||||||| |||||||||||||||||    
T  38374618 gaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggtt 38374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 48039670 - 48039723
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||| ||||| ||||| |||| ||| ||||||| |||||||||||||||||    
T  48039670 aggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 8108647 - 8108599
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||||| || ||||||||| |||||||| ||| ||||||||||||||||    
T  8108647 tgagacctcaaggaggagcgcactcccatatcccaagtcaataccacca 8108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 11720980 - 11721036
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||| |||||| || |||| ||||||||||| ||||||| |||| ||||    
T  11720980 aggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaagttggtt 11721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 43663112 - 43663168
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||||||| ||| |||| || || ||||||||||||| || ||||||||||||||    
T  43663112 tcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 5499427 - 5499483
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  5499427 aggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 31520608 - 31520681
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||| ||||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||||    
T  31520608 tcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 46518685 - 46518628
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  46518685 gaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 4844521 - 4844580
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  4844521 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 4870217 - 4870276
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  4870217 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 4222198 - 4222141
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||||| |||| ||||||||| | |||||||||||||||||    
T  4222198 gaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 17108901 - 17108974
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| | ||||||||||||||||||| ||||| ||||||||||||||  | ||||||||||||||    
T  17108901 tcaaacctgagaccttgaggaggagcacactcccacatctccagtcaataccaccaaactaacccaagtgggtt 17108974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 2667928 - 2667860
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| ||||||| ||||||||||||||||| |||| ||||||||||| |||||||||| || |||||    
T  2667928 tgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaaatgagttag 2667860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 14339676 - 14339609
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||| ||||| |||| |||||||    
T  14339676 tgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtta 14339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 31788987 - 31789046
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||||||| |||| ||||| ||| | |||||||||||||||||    
T  31788987 tcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 36720440 - 36720381
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||| ||| |||| |||||||||||  ||||||||||||||||    
T  36720440 tcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 42430388 - 42430334
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccacca-gccaacccaagtgggtta 42430334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 8051284 - 8051214
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| |||||||| |||| ||| |||| || |||| ||||||||||| |||||||||||||||||    
T  8051284 aacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 10499119 - 10499185
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| || |||| ||||| ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  10499119 tgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 49494149 - 49494223
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| |||||| ||||||| ||||||||||||| || ||||||||||||||| | || |||||||||| ||||    
T  49494149 tcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagtta 49494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 47454627 - 47454692
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||| |   ||||||||||||||    
T  47454627 tgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 35111246 - 35111178
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| ||||||| |||||||||||||| |||||| ||||| |||| | ||||| |||||||||||||    
T  35111246 tgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggttag 35111178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 51903896 - 51903955
Alignment:
Q  61 cgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||||||||||| |||| |||||||| || | ||||||| ||||||||    
T  51903896 cgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 203140 - 203090
Alignment:
Q  69 agcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||| |||| |||||||||||||| | |||||||||||||||||    
T  203140 agcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 30311372 - 30311306
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||||||||| |||| | ||||||| | ||||||||| |||||||    
T  30311372 tgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 8368802 - 8368875
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| ||||||| ||||||||| |||| | ||||||||||||||| | |||||| ||| ||||||    
T  8368802 tcaaacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaactcaattgggtt 8368875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 27093364 - 27093437
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| | |||||||||||||||||||  |  |||| ||||||||| | |||||||||||||||||    
T  27093364 tcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 8501592 - 8501624
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaat 94  Q
    |||||||||||||||||||||||||||||||||    
T  8501592 gaggaggagcacactcccagatctcaagtcaat 8501624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 10445149 - 10445217
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaa-taccaccatgccaacccaagtgggtta 120  Q
    |||||| |||||||||||||||||||||| || |||| ||| | |||| | ||||||||||||||||||    
T  10445149 tgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtta 10445217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 11612355 - 11612307
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaaccca 111  Q
    ||||||||||||||||||| || ||||| |||||||||| |||||||||    
T  11612355 aggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 16991589 - 16991541
Alignment:
Q  72 acactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||| |||| ||||||||||| |||||||||| |||||||    
T  16991589 acactcccagatcccaagccaataccaccaggccaacccaaatgggtta 16991541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 29563966 - 29563918
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||||| |||||||| |||||||| |||||||||||| |||||||||||    
T  29563966 tgagacttcgaggagaagcacacttccagatctcaagccaataccacca 29563918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 31608534 - 31608570
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaag 89  Q
    |||||| ||||||||||||||||||||||||||||||    
T  31608534 tgagacctcgaggaggagcacactcccagatctcaag 31608570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 13808895 - 13808958
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| | ||||||||||||||| ||||||| ||||||||||  ||||  |||||||||||||    
T  13808895 tgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 14186713 - 14186647
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | ||||||||||||||||| || || |||| ||||||||| | ||||||||||||||||||    
T  14186713 tgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 44069831 - 44069776
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||||| |||||| | ||||||||||||||||| |||||||||| ||| |||||||    
T  44069831 tcaaacctgagaccttgaggaggagcacactccaagatctcaagccaacaccacca 44069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 2597230 - 2597296
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| || |||||||||||||||| | |||  ||| |||||||||||  ||||||||||||||||    
T  2597230 tgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 12761568 - 12761510
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    ||||||| ||||||||||| || ||||||||||||||||  |||||||| | |||||||    
T  12761568 aggaggaacacactcccaggtcccaagtcaataccaccagaccaacccatgcgggttag 12761510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 15048071 - 15048137
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||| ||||||||| |||| | ||||||  | |||||||||||||||||    
T  15048071 tgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 19341858 - 19341800
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||||||||  ||||||||| ||||||| | | |||||||| |||||||    
T  19341858 gaggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtta 19341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 21960617 - 21960551
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||| ||| || |||| |||||||||||   |||||||| ||||||    
T  21960617 tgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 26989053 - 26988996
Alignment:
Q  61 cgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||| |||| |||||| |||| ||||||||| | |||||||||||||||||    
T  26989053 cgaggaggagcaaactctcagatc-caagccaataccactaggccaacccaagtgggtt 26988996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 28928898 - 28928952
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||||||||||||| |||||| |||| ||||||||| | ||||| ||||||||    
T  28928898 gaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 37788475 - 37788541
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||| || |  ||||||||||||||   |||||||||||||||||    
T  37788475 tgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 40286876 - 40286934
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||| |||||||| ||||||||||  || |||||||  |||||||||||||||||    
T  40286876 gaggaggaccacactccaagatctcaagcgaacaccaccagaccaacccaagtgggtta 40286934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 7975475 - 7975418
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||||||| |||| | ||||||| | ||||||| || ||||||    
T  7975475 gaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtt 7975418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 16354911 - 16354968
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||| ||| |  |||| ||||||||| | |||||||||||||||||    
T  16354911 gaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 26481984 - 26481927
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||| ||| || |||| || |||||||| || ||||||||||||||    
T  26481984 gaggaggagcacactctcaggtcccaagccattaccaccaagctaacccaagtgggtt 26481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 27923062 - 27923119
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||| |||  || |||| ||||||||||| ||||||| |||||||||    
T  27923062 gaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 30232387 - 30232330
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| | ||||||| |||  ||||||||||| | |||||||||||||||    
T  30232387 gaggaggagcacagttccagatcgcaaaccaataccaccagggcaacccaagtgggtt 30232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 8170738 - 8170670
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    |||||| | ||| |||||||||||||||  | ||||| ||||||||| | |||||||||| ||||||||    
T  8170738 tgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaaatgggttag 8170670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 31510739 - 31510795
Alignment:
Q  64 ggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||| |||||||  || ||||||||||||||||  |||||| ||||||||||    
T  31510739 ggaggagcatactcccaagtcccaagtcaataccaccagaccaacctaagtgggtta 31510795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 42799769 - 42799821
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    |||||||||||||| || || |||| ||| ||||||| |||||||||||||||    
T  42799769 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 44743865 - 44743901
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaag 89  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  44743865 tgagacctcgaggaggagcacactcccagatcccaag 44743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 51766952 - 51766893
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttaga 122  Q
    ||||| ||||||||||||||||| ||||||||||||| |   | |||||||||||||||||    
T  51766952 gaggaagagcacactcccagatc-caagtcaataccatcggactaacccaagtgggttaga 51766893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 14495815 - 14495882
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||    
T  14495815 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 16773873 - 16773807
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| || ||||||||||||||||  ||||| ||||||||||    
T  16773873 tgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 21589354 - 21589288
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||| |||| |||||||| || |||| ||||||||||| |||||||||||||||||    
T  21589354 tgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 30109318 - 30109384
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| || ||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  30109318 tgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 29075840 - 29075780
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||||||||||||| |||| ||||||||| | || |||||||||||||||    
T  29075840 tcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 1410669 - 1410728
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||  |||||||||    
T  1410669 tgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 8278278 - 8278352
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||  |||||||||||||||||||||  || |||| |||||||| ||  |||||||||||||||||    
T  8278278 tcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 21549143 - 21549213
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| |  ||||||||||||||||||| || |||| ||||||||| | |||||||||||||||||    
T  21549143 aacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 22020872 - 22020938
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| || |||||||||||||||||||||| ||||  |||||||| ||||||||||||| |||||    
T  22020872 tgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaagagggtt 22020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 30883204 - 30883274
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| | |||||||||||||||||||| || |||| ||||||||| |  ||||||||||||||||    
T  30883204 aacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 87426 - 87499
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| | ||||||||||||||||||||||  |||| ||||||||| | ||||||| |||||||||    
T  87426 tcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 6844793 - 6844728
Alignment:
Q  55 agacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||| |||||||||| |||||||||| ||  |||||||||||||||  ||||||||||||||||||    
T  6844793 agacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtta 6844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 19949633 - 19949692
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||||||  |||||||||||||||||||||| | |||||||||| |||||    
T  19949633 tcgaggaggagcacactct-agatctcaagtcaataccaccaagtcaacccaagtaggtta 19949692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 29692391 - 29692462
Alignment:
Q  48 aaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||| |||||| | ||||||||||||||||||||||| |||  |||||||||||  ||||||||| ||||||    
T  29692391 aaacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggtt 29692462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 43442262 - 43442207
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaac 108  Q
    |||||| | |||||||||||||||||||||||||||  ||||||||| ||||||||    
T  43442262 tgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 16457876 - 16457810
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||| || || |||| ||||||||||| ||||||| |||||||||    
T  16457876 tgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 36958132 - 36958198
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||| ||||| |||||||||| |||||||| |||| |||||||  |||||||||||||||    
T  36958132 tgagacttcgatgaggaacacactcccaaatctcaagccaatcccaccatatcaacccaagtgggtt 36958198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 636596 - 636649
Alignment:
Q  68 gagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttag 121  Q
    ||||||||| ||||||||||||||||||||| ||| |||| |||| ||||||||    
T  636596 gagcacacttccagatctcaagtcaataccatcataccaatccaaatgggttag 636649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 24652924 - 24652872
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    ||||||| |||||||||| ||||||||||||||||||||  |||| |||||||    
T  24652924 aggaggaacacactcccaaatctcaagtcaataccaccagaccaatccaagtg 24652872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 3252319 - 3252366
Alignment:
Q  73 cactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  3252319 cactcccaagtctcaagtcaataccactaggccaacccaagtgggtta 3252366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 25627123 - 25627056
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | |||||||||||||||||||  |  |||| ||||||||| | ||||||||||||||||||    
T  25627123 tgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 26598578 - 26598524
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| |||||| |||| ||||||||| | ||||| |||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggtt 26598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 34984863 - 34984806
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||| |  |||| ||||||||| |  ||||||||||||||||    
T  34984863 gaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 37148099 - 37148046
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccac 99  Q
    |||||| |||||| | |||||||||||||||| ||| ||||| |||||||||||    
T  37148099 tcaaacctgagaccttgaggaggagcacactcacaggtctcaggtcaataccac 37148046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 40281112 - 40281169
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||| || ||| ||| |||||||||||   |||||||||||||||||    
T  40281112 aggaggagcacactctcatatcccaaatcaataccacctaaccaacccaagtgggtta 40281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 84894 - 84854
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaag 89  Q
    |||||||||| | ||||||||||||||||||||||| ||||    
T  84894 aacttgagaccttgaggaggagcacactcccagatcccaag 84854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 15641809 - 15641865
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    ||||||| |||||||||||||| || ||||||||||||| |  ||||||| ||||||    
T  15641809 tcgaggacgagcacactcccaggtcccaagtcaataccatcgggccaaccaaagtgg 15641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 28783126 - 28783060
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  28783126 tgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 35641911 - 35641977
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||  ||||||||||||||||    
T  35641911 tgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 23361659 - 23361726
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| | ||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||    
T  23361659 tgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtta 23361726  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 968428 - 968362
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| || |||| ||||||||||| |||||| ||||||||||    
T  968428 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 16852406 - 16852340
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| || |||| ||||||||| | |||||||||||||||||    
T  16852406 tgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 11492085 - 11492146
Alignment:
Q  55 agacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||| ||||| |||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  11492085 agacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  64 ggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||| || |||||||||||||| | |||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 29858059 - 29858124
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggt 118  Q
    |||||| |||||||||||||||||||| | || |||| ||||||||||| ||||| ||||||||||    
T  29858059 tgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 2203558 - 2203494
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    |||||| | |||||||||||||||||||| || |||| ||||||||| | |||||||||||||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 1767006 - 1766948
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||| ||| ||||||||||| | |||||| |||||||||| |||||||    
T  1767006 gaggaggagcacacttccaaatctcaagtcagtcccaccaagccaacccaaatgggtta 1766948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 4830553 - 4830487
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||| ||||||| |||||| |||   |||||||||| |||||||||||||||||    
T  4830553 tgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 5264610 - 5264544
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| ||||||||||||||| |||||| |  |||| ||||||||| | |||||||||||||||||    
T  5264610 tgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 5801117 - 5801047
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| |||||  |||||||||||| ||||| ||||  |||||||||| | |||||||||||||||    
T  5801117 aacttgagacgtcgagacggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggtt 5801047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 19703497 - 19703563
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||||||||||| ||| || |||| ||||||||| | |||||||||||||||||    
T  19703497 tgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 26688931 - 26688865
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | ||||||||||||||||| || || |||| ||| ||||||| |||||||||||||||||    
T  26688931 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 35287773 - 35287715
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||||| | |||||||| ||| ||||||| ||| ||||||||||||||    
T  35287773 gaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtta 35287715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 30483903 - 30483960
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||| ||| |||| |||||||||   |||||||||||||||||    
T  30483903 gaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 32157248 - 32157191
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||| ||||| || || |||||||||||||||| |||||||||| ||||||    
T  32157248 gaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 44780117 - 44780190
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||| | |||||||||||||||||||  || |||| |||| |||| | |||||||||||||||||    
T  44780117 tcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 3624634 - 3624582
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtggg 117  Q
    ||||||||||||||||| || |||| ||||||||| | |||||||||||||||    
T  3624634 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||||| |||| ||||| ||| | ||||||| |||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 29431067 - 29431011
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||||||||  || |||| ||||||| ||| |||||||||||||||||    
T  29431067 aggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 6530861 - 6530806
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||| || || |||| ||| ||||||| ||||||||||||||||||    
T  6530861 gaggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtta 6530806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 23874392 - 23874459
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| ||||||||| ||| | |||||| || |||| ||||||||| | ||||||||||||||||||    
T  23874392 tgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtta 23874459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 36205261 - 36205198
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| | |||||||||||||||||||||||||||  ||||| || ||  |||||||||||||    
T  36205261 tgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 40872930 - 40872875
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||||||  |||||  || |||||| ||||||||||||||||||||||||    
T  40872930 gaggagcacactctaagatcctaaatcaatatcaccatgccaacccaagtgggtta 40872875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 43969019 - 43969082
Alignment:
Q  64 ggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggttagattacg 127  Q
    ||||||||||||||| |   | |||| |||||||| |||||||||||||||||||| |||||||    
T  43969019 ggaggagcacactcctaagccccaagccaataccatcatgccaacccaagtgggttcgattacg 43969082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 8059698 - 8059632
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||||| ||||||| || ||  ||||||||||||| || |||||||||||||||||    
T  8059698 tgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 8485053 - 8484999
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| ||| || ||||  |||||||||| |||||||||||||||||    
T  8485053 gaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 18540364 - 18540298
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| | |||||| || |||||||||| || |||| ||||||||| | |||||||||||||||||    
T  18540364 tgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 34966853 - 34966923
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    ||||||||||||| |||| ||| ||||||||||||  ||||||| |||||||| ||  ||||| |||||||    
T  34966853 tcaaacttgagacctcgaagagtagcacactcccaagtctcaagccaataccatcagaccaactcaagtgg 34966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 7140768 - 7140727
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccacca 101  Q
    |||||||||||||||| |||||||| |||| |||||||||||    
T  7140768 tcgaggaggagcacacacccagatcccaagccaataccacca 7140727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 14254780 - 14254727
Alignment:
Q  66 aggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||||||||||||  |||||| || | | |||||||||||||||    
T  14254780 aggagcacactcccagatctcaaaccaatacaactaggtcaacccaagtgggtt 14254727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 22268937 - 22269009
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| | ||| || |||||||||| || || |||| ||| ||||||| |||||||||||||||||    
T  22268937 tcaaacttgagaccttgagaag-agcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 22269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 35826367 - 35826310
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||||||||||| ||| ||||||| || |||||| | |||||||||| |||||||    
T  35826367 aggaggagcacactcacaggtctcaagccactaccactaggccaacccaattgggtta 35826310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 28750626 - 28750571
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||| |||||||||||  ||||| |||||||||| |||||||| ||||||||    
T  28750626 aggaggagcgcactcccagattccaagt-aataccaccaggccaaccccagtgggtt 28750571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 31381412 - 31381356
Alignment:
Q  63 aggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||||||| ||||||  |||||||||||||| ||| ||| ||| |||||||    
T  31381412 aggaggagcacacttccagattccaagtcaataccactatgtcaatccaggtgggtt 31381356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 41643 - 41710
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||| ||||||||||||| |||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  41643 tgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtta 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 15333 - 15399
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||| |||||||||||||||||||||| || |||| |||||||||||  ||||||||||||||||    
T  15333 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 13056 - 13118
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtg 115  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  13056 tgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 11594 - 11534
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaag 113  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||    
T  11594 tgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 19853 - 19924
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    |||||||||| || |||||||||| ||||||||||| |||| |||||||| ||||||||  |||||||||||    
T  19853 aacttgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaattcaagtgggtta 19924  T

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Target: scaffold1367 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 850 - 910
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaag 113  Q
    |||||| ||||||||||||||| ||||||||| |||| ||||||||||| |||| ||||||    
T  850 tgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 157004 - 157056
Alignment:
Q  60 tcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaa 112  Q
    |||||||||||||||||||||||||||||| |||||||| || | ||||||||    
T  157004 tcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 157056  T

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Target: scaffold0417 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 10292 - 10219
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||| |||| ||||||||  || |||||||||||| |||| ||||| || || |||||||||||||||||    
T  10292 tcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaacccaagtgggtt 10219  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 15780 - 15853
Alignment:
Q  46 tcaaacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||||| | ||||||||||| ||||| | ||| |||| ||||||||||| ||||||  |||||||||    
T  15780 tcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggccaacttaagtgggtt 15853  T

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Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 32788 - 32845
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| ||| ||||||||   || ||||||||||| |||||||||||||||||    
T  32788 gaggaggagcgcacccccagatcctcagccaataccaccaggccaacccaagtgggtt 32845  T

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Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 42539 - 42596
Alignment:
Q  62 gaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||||||||| ||||||||||  |||||||||||||| | |||||||||| ||||||    
T  42539 gaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

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Target: scaffold0187 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 12428 - 12499
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| || | |||||||| ||||||  ||| | ||||||||||||||||| |||||||||| |||||||    
T  12428 aacttgaaactttgaggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtta 12499  T

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Target: scaffold0187; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 22756 - 22827
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtta 120  Q
    ||||||| || | |||||||| ||||||  ||| | ||||||||||||||||| |||||||||| |||||||    
T  22756 aacttgaaactttgaggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtta 22827  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 94981 - 95044
Alignment:
Q  53 tgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgg 116  Q
    |||||| | |||||||||||||||||||| |  |||| ||||||||| | ||||||||||||||    
T  94981 tgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0517 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 7732 - 7802
Alignment:
Q  49 aacttgagacatcgaggaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    |||||||||| |  ||||||||||||||  ||| ||||||| |||||||||||  ||||||||||| ||||    
T  7732 aacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 112336 - 112282
Alignment:
Q  65 gaggagcacactcccagatctcaagtcaataccaccatgccaacccaagtgggtt 119  Q
    ||||| |||||||||||||  |||| |||||| |||| |||||||||||||||||    
T  112336 gaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

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