View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14125_low_4 (Length: 335)
Name: NF14125_low_4
Description: NF14125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14125_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 45 - 319
Target Start/End: Complemental strand, 5416160 - 5415885
Alignment:
| Q |
45 |
attaagtacaaagttagcactaaaattcttcttctgtcgagaataaaatatataattgaattgattagcatattcactaaatacatttttggttctaaat |
144 |
Q |
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| T |
5416160 |
attaagtacaaagttagcactaaaattcttcttctgtcgagaataaaatatataattgaattgattagcatattcactaaatacatttttggttctaaat |
5416061 |
T |
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| Q |
145 |
tcgtgagattcttctcattctcatgtgcgagtcaattcattcatttgggattacttctcctcgagcggtatt-ttttcatccacatttatttactctgcc |
243 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
5416060 |
tcgtgagattcttctcattctcatgtgcaagtcaattcattaatttgggattacttctcctcgagcggtatttttttcatccacatttatttactctgcc |
5415961 |
T |
|
| Q |
244 |
attgactcaacgggacacaatgcctaaccaacctattgtggtaaagattttcgatacaaaaagttggtcacctttg |
319 |
Q |
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|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
5415960 |
attggctcaacgggacacaatgcctaaccaacccattgtggtaaagattttcgatacaaaaagttggtcacctttg |
5415885 |
T |
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