View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14128_low_9 (Length: 317)

Name: NF14128_low_9
Description: NF14128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14128_low_9
NF14128_low_9
[»] scaffold0032 (3 HSPs)
scaffold0032 (1-170)||(13472-13641)
scaffold0032 (172-297)||(13176-13300)
scaffold0032 (173-247)||(108033-108107)
[»] chr8 (28 HSPs)
chr8 (6-167)||(2544855-2545016)
chr8 (170-307)||(21494254-21494391)
chr8 (170-307)||(22147753-22147890)
chr8 (1-108)||(24929046-24929153)
chr8 (170-297)||(18612721-18612848)
chr8 (170-297)||(2545262-2545389)
chr8 (1-108)||(41507058-41507165)
chr8 (173-295)||(3431085-3431208)
chr8 (173-288)||(22886654-22886770)
chr8 (170-297)||(16038695-16038821)
chr8 (94-173)||(18612400-18612479)
chr8 (94-173)||(18619305-18619384)
chr8 (60-173)||(3431463-3431577)
chr8 (94-173)||(22886320-22886400)
chr8 (94-173)||(22147432-22147511)
chr8 (60-173)||(13721110-13721224)
chr8 (1-63)||(23217936-23217998)
chr8 (57-173)||(23837153-23837271)
chr8 (96-173)||(21494631-21494709)
chr8 (1-55)||(22981250-22981304)
chr8 (173-247)||(24385610-24385684)
chr8 (173-247)||(43373350-43373424)
chr8 (1-48)||(21259637-21259684)
chr8 (85-173)||(33528409-33528498)
chr8 (173-243)||(41506671-41506741)
chr8 (174-247)||(7000478-7000551)
chr8 (1-69)||(22321574-22321642)
chr8 (60-108)||(24717111-24717159)
[»] chr5 (24 HSPs)
chr5 (172-307)||(34939594-34939729)
chr5 (170-307)||(17909820-17909957)
chr5 (173-299)||(7529228-7529354)
chr5 (173-295)||(9730187-9730310)
chr5 (1-108)||(2031709-2031816)
chr5 (1-91)||(17471854-17471944)
chr5 (60-173)||(9730565-9730679)
chr5 (67-173)||(109015-109123)
chr5 (60-173)||(10778152-10778266)
chr5 (67-173)||(16105608-16105716)
chr5 (94-173)||(17909499-17909578)
chr5 (103-173)||(7528902-7528973)
chr5 (1-69)||(25004875-25004943)
chr5 (173-246)||(25005137-25005210)
chr5 (60-173)||(23514521-23514635)
chr5 (173-247)||(27182429-27182503)
chr5 (175-247)||(18530946-18531018)
chr5 (173-247)||(22053711-22053785)
chr5 (172-247)||(32951011-32951086)
chr5 (173-247)||(108686-108760)
chr5 (94-173)||(29917957-29918038)
chr5 (175-247)||(2032135-2032207)
chr5 (173-247)||(23507270-23507344)
chr5 (173-247)||(23981363-23981437)
[»] chr4 (34 HSPs)
chr4 (170-307)||(19697176-19697313)
chr4 (170-307)||(19707761-19707898)
chr4 (173-307)||(8045272-8045406)
chr4 (170-307)||(32460501-32460638)
chr4 (1-108)||(34395156-34395263)
chr4 (173-307)||(14500010-14500144)
chr4 (85-170)||(9795198-9795283)
chr4 (94-173)||(14996121-14996200)
chr4 (94-173)||(19697555-19697634)
chr4 (94-173)||(19708140-19708219)
chr4 (172-297)||(9795532-9795657)
chr4 (172-297)||(19020792-19020917)
chr4 (173-297)||(16523146-16523270)
chr4 (67-173)||(16522783-16522891)
chr4 (174-295)||(22738577-22738698)
chr4 (95-173)||(9295688-9295767)
chr4 (6-69)||(34177767-34177830)
chr4 (94-173)||(7132247-7132327)
chr4 (170-246)||(40885418-40885494)
chr4 (1-60)||(19559422-19559481)
chr4 (188-273)||(18248540-18248626)
chr4 (94-173)||(8044934-8045015)
chr4 (173-247)||(15674967-15675041)
chr4 (223-295)||(8378543-8378615)
chr4 (60-108)||(5682776-5682824)
chr4 (60-108)||(25119457-25119505)
chr4 (173-247)||(10104128-10104202)
chr4 (173-247)||(15135865-15135939)
chr4 (173-247)||(15272169-15272243)
chr4 (60-172)||(20000683-20000796)
chr4 (96-152)||(32460880-32460937)
chr4 (176-247)||(31132628-31132699)
chr4 (173-247)||(33241011-33241085)
chr4 (173-247)||(13246737-13246811)
[»] scaffold0387 (1 HSPs)
scaffold0387 (172-307)||(6993-7128)
[»] scaffold0029 (2 HSPs)
scaffold0029 (170-307)||(49650-49787)
scaffold0029 (94-173)||(50030-50110)
[»] chr3 (34 HSPs)
chr3 (170-307)||(11476993-11477130)
chr3 (1-108)||(13838795-13838902)
chr3 (173-307)||(14285289-14285423)
chr3 (173-299)||(19947026-19947153)
chr3 (173-295)||(16933779-16933901)
chr3 (94-173)||(8268927-8269006)
chr3 (94-173)||(8276027-8276106)
chr3 (1-76)||(22275100-22275175)
chr3 (1-76)||(15468630-15468705)
chr3 (172-297)||(12901915-12902040)
chr3 (188-297)||(15938302-15938411)
chr3 (60-173)||(16934156-16934270)
chr3 (1-69)||(48421636-48421704)
chr3 (94-173)||(11477373-11477453)
chr3 (66-173)||(18910959-18911067)
chr3 (95-173)||(9303282-9303361)
chr3 (188-297)||(15936460-15936569)
chr3 (172-247)||(11986038-11986113)
chr3 (211-297)||(9302950-9303035)
chr3 (1-63)||(14177164-14177226)
chr3 (1-63)||(18969980-18970042)
chr3 (174-295)||(44229293-44229414)
chr3 (103-173)||(14284963-14285034)
chr3 (173-247)||(16261777-16261851)
chr3 (173-246)||(51960990-51961063)
chr3 (60-108)||(17956233-17956281)
chr3 (1-48)||(39656402-39656449)
chr3 (173-247)||(53771365-53771439)
chr3 (58-172)||(17204656-17204772)
chr3 (107-173)||(6228799-6228866)
chr3 (67-134)||(7853948-7854015)
chr3 (107-173)||(12952970-12953037)
chr3 (173-247)||(2050115-2050189)
chr3 (173-247)||(38168237-38168311)
[»] scaffold0125 (1 HSPs)
scaffold0125 (172-307)||(41964-42099)
[»] chr2 (29 HSPs)
chr2 (170-301)||(28031038-28031169)
chr2 (1-108)||(25601923-25602030)
chr2 (173-301)||(33128372-33128501)
chr2 (173-307)||(17204659-17204794)
chr2 (172-297)||(7507665-7507790)
chr2 (172-297)||(23777870-23777995)
chr2 (67-173)||(25213012-25213121)
chr2 (95-173)||(28031421-28031500)
chr2 (174-295)||(21142203-21142324)
chr2 (60-173)||(42178151-42178265)
chr2 (229-307)||(15633593-15633672)
chr2 (66-173)||(12636050-12636158)
chr2 (95-173)||(24826901-24826980)
chr2 (174-295)||(5888457-5888578)
chr2 (66-173)||(8943812-8943920)
chr2 (66-173)||(12641824-12641932)
chr2 (94-173)||(15633207-15633286)
chr2 (95-173)||(17204325-17204404)
chr2 (172-247)||(25265261-25265336)
chr2 (60-109)||(22274681-22274730)
chr2 (1-69)||(67865-67933)
chr2 (67-173)||(19433506-19433614)
chr2 (173-247)||(24341267-24341341)
chr2 (60-173)||(3798785-3798899)
chr2 (11-55)||(7321586-7321630)
chr2 (107-173)||(24884692-24884759)
chr2 (173-247)||(463043-463117)
chr2 (93-173)||(3415-3496)
chr2 (60-109)||(22283914-22283963)
[»] chr6 (32 HSPs)
chr6 (170-307)||(16299784-16299921)
chr6 (170-307)||(19629645-19629781)
chr6 (172-297)||(13620618-13620744)
chr6 (175-307)||(15742017-15742150)
chr6 (173-307)||(32276557-32276691)
chr6 (173-307)||(18002292-18002427)
chr6 (93-173)||(19629323-19629403)
chr6 (173-297)||(18823191-18823315)
chr6 (173-297)||(18839046-18839170)
chr6 (94-173)||(32276946-32277025)
chr6 (66-173)||(18087005-18087113)
chr6 (67-173)||(4991037-4991145)
chr6 (66-173)||(16231858-16231966)
chr6 (94-173)||(16300163-16300243)
chr6 (1-63)||(15889840-15889902)
chr6 (58-173)||(18381857-18381974)
chr6 (66-173)||(13620976-13621084)
chr6 (172-247)||(27751741-27751816)
chr6 (173-247)||(23148303-23148377)
chr6 (173-247)||(23153754-23153828)
chr6 (1-55)||(25640697-25640751)
chr6 (60-108)||(19983540-19983588)
chr6 (6-62)||(22585681-22585737)
chr6 (6-62)||(22590512-22590568)
chr6 (60-108)||(35015406-35015454)
chr6 (4-63)||(15005040-15005099)
chr6 (172-243)||(35009314-35009385)
chr6 (60-173)||(23977729-23977843)
chr6 (173-247)||(23995247-23995321)
chr6 (173-247)||(26090059-26090133)
chr6 (172-247)||(29666180-29666255)
chr6 (106-173)||(25651242-25651310)
[»] scaffold0173 (2 HSPs)
scaffold0173 (170-307)||(5546-5683)
scaffold0173 (94-173)||(5215-5294)
[»] scaffold0574 (1 HSPs)
scaffold0574 (170-297)||(9319-9447)
[»] scaffold1734 (1 HSPs)
scaffold1734 (1-108)||(1298-1405)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-108)||(29990-30097)
[»] scaffold0001 (6 HSPs)
scaffold0001 (1-108)||(171806-171913)
scaffold0001 (1-108)||(177509-177616)
scaffold0001 (170-273)||(164803-164906)
scaffold0001 (95-173)||(165148-165223)
scaffold0001 (173-247)||(172210-172284)
scaffold0001 (173-247)||(177913-177987)
[»] scaffold0335 (2 HSPs)
scaffold0335 (173-307)||(5375-5508)
scaffold0335 (93-173)||(5763-5844)
[»] scaffold0207 (2 HSPs)
scaffold0207 (173-307)||(18026-18160)
scaffold0207 (94-167)||(17694-17768)
[»] scaffold0118 (2 HSPs)
scaffold0118 (173-307)||(34206-34340)
scaffold0118 (96-152)||(34597-34654)
[»] scaffold0037 (1 HSPs)
scaffold0037 (170-299)||(95295-95425)
[»] chr7 (27 HSPs)
chr7 (173-301)||(47480847-47480976)
chr7 (173-295)||(371417-371540)
chr7 (60-173)||(371048-371162)
chr7 (66-173)||(18980203-18980311)
chr7 (188-297)||(18253667-18253777)
chr7 (174-295)||(10000197-10000318)
chr7 (60-173)||(14251080-14251194)
chr7 (174-295)||(48622493-48622614)
chr7 (172-288)||(15862225-15862341)
chr7 (66-173)||(15927534-15927642)
chr7 (172-247)||(13321333-13321408)
chr7 (1-63)||(13352011-13352073)
chr7 (173-247)||(25124450-25124524)
chr7 (174-295)||(16418805-16418926)
chr7 (173-247)||(2029244-2029318)
chr7 (60-173)||(13758330-13758444)
chr7 (173-247)||(36052971-36053045)
chr7 (173-247)||(42056146-42056220)
chr7 (173-247)||(15709469-15709543)
chr7 (4-63)||(15977975-15978034)
chr7 (107-173)||(16915102-16915169)
chr7 (173-247)||(11580619-11580693)
chr7 (173-247)||(13036896-13036970)
chr7 (173-247)||(16212071-16212145)
chr7 (58-134)||(17224152-17224229)
chr7 (67-173)||(14272060-14272168)
chr7 (173-243)||(36024452-36024523)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-109)||(271926-272034)
scaffold0009 (173-245)||(272330-272402)
[»] scaffold0361 (1 HSPs)
scaffold0361 (172-307)||(3504-3637)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-108)||(24438-24545)
[»] chr1 (8 HSPs)
chr1 (170-297)||(20254628-20254754)
chr1 (60-173)||(21650222-21650336)
chr1 (66-173)||(17148533-17148641)
chr1 (173-247)||(20893509-20893583)
chr1 (60-108)||(44035219-44035267)
chr1 (188-247)||(20913350-20913409)
chr1 (58-134)||(13377054-13377131)
chr1 (58-173)||(20177131-20177248)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-173)||(4843-5014)
scaffold0075 (172-307)||(34271-34406)
[»] scaffold0160 (2 HSPs)
scaffold0160 (1-108)||(3418-3525)
scaffold0160 (174-247)||(339-412)
[»] scaffold0049 (1 HSPs)
scaffold0049 (171-297)||(48502-48628)
[»] scaffold0012 (2 HSPs)
scaffold0012 (8-101)||(253237-253330)
scaffold0012 (173-247)||(247324-247398)
[»] scaffold0615 (2 HSPs)
scaffold0615 (188-297)||(6017-6127)
scaffold0615 (94-173)||(6398-6478)
[»] scaffold0066 (2 HSPs)
scaffold0066 (172-307)||(45337-45473)
scaffold0066 (172-307)||(54723-54859)
[»] scaffold0303 (1 HSPs)
scaffold0303 (189-299)||(4251-4362)
[»] scaffold0023 (2 HSPs)
scaffold0023 (173-297)||(61030-61154)
scaffold0023 (173-247)||(48903-48977)
[»] scaffold0396 (1 HSPs)
scaffold0396 (3-114)||(11942-12054)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-69)||(22186-22254)
[»] scaffold1295 (1 HSPs)
scaffold1295 (3-63)||(167-227)
[»] scaffold0507 (1 HSPs)
scaffold0507 (3-63)||(1635-1695)
[»] scaffold0483 (2 HSPs)
scaffold0483 (1-61)||(1017-1077)
scaffold0483 (72-152)||(6631-6713)
[»] scaffold0162 (4 HSPs)
scaffold0162 (94-173)||(11739-11818)
scaffold0162 (172-246)||(8051-8126)
scaffold0162 (172-247)||(12062-12137)
scaffold0162 (170-247)||(26298-26375)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-61)||(45804-45864)
[»] scaffold0028 (1 HSPs)
scaffold0028 (67-173)||(130521-130629)
[»] scaffold0516 (1 HSPs)
scaffold0516 (188-295)||(11954-12061)
[»] scaffold0026 (1 HSPs)
scaffold0026 (188-297)||(108068-108177)
[»] scaffold0017 (1 HSPs)
scaffold0017 (174-295)||(54182-54303)
[»] scaffold0016 (3 HSPs)
scaffold0016 (58-174)||(116686-116804)
scaffold0016 (60-108)||(162428-162476)
scaffold0016 (60-108)||(166506-166554)
[»] scaffold0215 (2 HSPs)
scaffold0215 (188-268)||(9201-9282)
scaffold0215 (188-268)||(16099-16180)
[»] scaffold0079 (1 HSPs)
scaffold0079 (3-63)||(3975-4035)
[»] scaffold0132 (1 HSPs)
scaffold0132 (172-239)||(13823-13890)
[»] scaffold0302 (1 HSPs)
scaffold0302 (173-247)||(12418-12492)
[»] scaffold0003 (1 HSPs)
scaffold0003 (174-295)||(7517-7638)
[»] scaffold0892 (1 HSPs)
scaffold0892 (223-295)||(3775-3847)
[»] scaffold0686 (1 HSPs)
scaffold0686 (60-108)||(6332-6380)
[»] scaffold0184 (1 HSPs)
scaffold0184 (60-108)||(31529-31577)
[»] scaffold0078 (1 HSPs)
scaffold0078 (60-108)||(41267-41315)
[»] scaffold0467 (1 HSPs)
scaffold0467 (172-243)||(10218-10289)
[»] scaffold0498 (1 HSPs)
scaffold0498 (173-247)||(9183-9257)
[»] scaffold0266 (2 HSPs)
scaffold0266 (173-247)||(3466-3540)
scaffold0266 (173-247)||(1430-1504)
[»] scaffold0251 (1 HSPs)
scaffold0251 (173-247)||(13243-13317)
[»] scaffold0011 (1 HSPs)
scaffold0011 (173-247)||(123045-123119)
[»] scaffold0158 (1 HSPs)
scaffold0158 (174-247)||(25532-25605)
[»] scaffold0063 (1 HSPs)
scaffold0063 (5-62)||(44249-44306)
[»] scaffold0053 (1 HSPs)
scaffold0053 (58-134)||(77061-77138)
[»] scaffold0150 (1 HSPs)
scaffold0150 (67-173)||(28501-28609)
[»] scaffold0025 (2 HSPs)
scaffold0025 (173-247)||(9160-9234)
scaffold0025 (173-247)||(146906-146980)
[»] scaffold0597 (1 HSPs)
scaffold0597 (173-247)||(836-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (173-247)||(9840-9914)
[»] scaffold0234 (1 HSPs)
scaffold0234 (173-247)||(17262-17336)
[»] scaffold0058 (1 HSPs)
scaffold0058 (173-247)||(57350-57424)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-55)||(5942-5996)
[»] scaffold0004 (1 HSPs)
scaffold0004 (173-247)||(193355-193429)
[»] scaffold0080 (1 HSPs)
scaffold0080 (67-173)||(43972-44080)


Alignment Details
Target: scaffold0032 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 13641 - 13472
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  13641 accacaaccacaatttatgatcatgcattccatcatatttcaacaagaacatgtcgtaattcaccaatttcacaaaaccactaacaacaatccatttctc 13542  T
Q  101 aacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaaca 170  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13541 aacaagaatcatgatatatcaacacccaagccataatcataaacaacaacatgtatcaacaacaacaaca 13472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 13300 - 13176
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| ||  |||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||||||| |||||||||||||| ||||    
T  13300 catgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 13201  T
Q  272 tttctttaacccttgttgttcctttc 297  Q
    |||   ||||||||||| ||||||||    
T  13200 ttt-gctaacccttgttcttcctttc 13176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 108107 - 108033
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   |||||||||  |||||||||||| || |||||||||    
T  108107 atgattatgataaagactaacccccttaccttagatgaagattaattccaacttaggcttcaattcagctcctaa 108033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 2544855 - 2545016
Alignment:
Q  6 aaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctcaacaa 105  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  2544855 aaccacaacttatgattatgcataccatcatatttcaacaacaacatgtcgtaattcaccaatttcacaaaaccactaacaacagtccatttctcaacaa 2544954  T
Q  106 caatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaaca 167  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  2544955 caatcatgatatatcaacacccaagccataatcataaacaacaacatgtatcaacaacaaca 2545016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 21494391 - 21494254
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||||||| ||||||||||||||||||| |  |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  21494391 atcatgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttacc 21494292  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  21494291 cctttctctaacccttgttcttcctttctcccactttc 21494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 170 - 307
Target Start/End: Original strand, 22147753 - 22147890
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||  ||||||| ||||||||||||||||||||||||||||||| |    
T  22147753 atcatgattatgaagaacactaaaccccttaccttaggttatgatcaattcaaacttgagcttcaccttagctcctaattcttcaatcttcaagtttctc 22147852  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| |||||||| || ||||||||||||||||||    
T  22147853 cctttctctaacccttattcttcctttctccctctttc 22147890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24929153 - 24929046
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  24929153 accacaaccagaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcaccaatttcacaaaaccaccaacaacaatccatttctc 24929054  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  24929053 aacaacaa 24929046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 18612721 - 18612848
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||||| | || ||||||||||||||||||||||||||||||||||||| || |    
T  18612721 atcatgattgtgaagaacactaacccccttaccttaggttatgatcaattcaaatttgggcttcactttagctcctaattcttcaatcttcaagtatctc 18612820  T
Q  270 cctttctttaacccttgttgttcctttc 297  Q
    ||||||| ||||||||||| ||||||||    
T  18612821 cctttctctaacccttgttcttcctttc 18612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 2545262 - 2545389
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||    
T  2545262 atcatgattatgatgaagactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagttttcc 2545361  T
Q  270 cctttctttaacccttgttgttcctttc 297  Q
    || ||   ||||||||||| ||||||||    
T  2545362 ccctttgctaacccttgttcttcctttc 2545389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41507165 - 41507058
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||| ||||||| | ||||||||||||||||    
T  41507165 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataactcaccaattccactaaaccaccaacaacaatccatttctc 41507066  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  41507065 aacaacaa 41507058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 3431208 - 3431085
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccc 271  Q
    |||||||||| ||| |||||||||||||||||||||| |||| ||| || |||| |||||||||||||||||||||| |||||||||||||||||| |||    
T  3431208 atgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcactttagctcctaattgcttcaatcttcaagtttctccc 3431109  T
Q  272 tttctttaacccttgttgttcctt 295  Q
    ||||| ||||||||||| ||||||    
T  3431108 tttctctaacccttgttcttcctt 3431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 22886654 - 22886770
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa-ttcttcaatcttcaagtttccccc 271  Q
    ||||||||||  || |||||||||||||||||||||  |||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaatttcttcaatcttcaagtttccccc 22886753  T
Q  272 tttctttaacccttgtt 288  Q
    ||||| |||||||||||    
T  22886754 tttctctaacccttgtt 22886770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 16038821 - 16038695
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||| ||| || ||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||||||| |||||||||||||||||    
T  16038821 atcatgattatgatgaagacaaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttccc 16038722  T
Q  270 cctttctttaacccttgttgttcctttc 297  Q
    |||||   ||||||||||| ||||||||    
T  16038721 ccttt-gctaacccttgttcttcctttc 16038695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 18612400 - 18612479
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  18612400 atttctcaccaacaatcatgatatatgaacactcaagccataatcataaacaacaacatgtctcagcaacaacaacatca 18612479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 18619305 - 18619384
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  18619305 atttctcaccaacaatcatgatatatgaacactcaagccataatcataaacaacaacatgtctcagcaacaacaacatca 18619384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 3431577 - 3431463
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    ||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  3431577 ttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatgtctca 3431478  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  3431477 gcaacaacaacatca 3431463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 22886320 - 22886400
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||| | ||||||||||||||||||    
T  22886320 atttctcatcaacaatcatgatatatgaacacccaagtcataaatcataaacaacaacatatctcagcaacaacaacatca 22886400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 22147432 - 22147511
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||| ||||  |||||| ||||||||||||||||||    
T  22147432 atttctcaccaacaatcatgatatatgaacacctaagccataataatatacaacgacatgtctcagcaacaacaacatca 22147511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 13721224 - 13721110
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||| ||||| | |||    
T  13721224 ttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctca 13721125  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  13721124 gcaacaacaacatca 13721110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23217936 - 23217998
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  23217936 accacaactacaacttataatcatgcattccatcacatttcaacaacaacatgtcataattca 23217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 23837153 - 23837271
Alignment:
Q  57 taattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgt 154  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||| |||| ||||||||  |||||| ||||||||||| |||||| ||||| |||||      
T  23837153 taattcaccaatttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
Q  155 atcagcaacaacaacatca 173  Q
     | ||||||||||||||||    
T  23837253 cttagcaacaacaacatca 23837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 21494709 - 21494631
Alignment:
Q  96 ttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||| |||||||||||||||||| |||||||||  |||| |||||||||| ||||| | ||||||||||||||||||    
T  21494709 ttctcaccaacaatcatgatatatgcacacccaagttataaatcataaacaacaacatatctcagcaacaacaacatca 21494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22981250 - 22981304
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtc 55  Q
    |||||||| ||||||||| |||||||||||||||| | |||||||||||||||||    
T  22981250 accacaacaacaacttataatcatgcattccatcaaaattcaacaacaacatgtc 22981304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 24385684 - 24385610
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaa 24385610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 43373424 - 43373350
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  43373424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 43373350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21259684 - 21259637
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaaca 48  Q
    |||||||| ||||||||| |||||||||||||||| | ||||||||||    
T  21259684 accacaacaacaacttataatcatgcattccatcaaaattcaacaaca 21259637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 33528409 - 33528498
Alignment:
Q  85 caacaatccatttctcaacaacaa-tcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||| |||||||||| || ||| ||||||| |||||||||||||||||| |||||| ||| |||| || | | ||||||||||||||||    
T  33528409 caacaacccatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaac-aaaatatctcttagcaacaacaacatca 33528498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 41506741 - 41506671
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctc 243  Q
    |||||||||| ||| ||||||||||||||||||| |   ||||||  || |||||||||||| ||||||||    
T  41506741 atgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctc 41506671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 7000551 - 7000478
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||| ||| |||||||||||||| |||| |   ||||||  || |||||||||||| ||||||||||||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaa 7000478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22321642 - 22321574
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatt 69  Q
    ||||||| |||||| ||| |||||||||||||||| | || ||||| |||||||  |||||||| ||||    
T  22321642 accacaatcacaacatataatcatgcattccatcacaatttaacaataacatgttataattcaccaatt 22321574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 24717159 - 24717111
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| ||||| |||||||||| | ||||||||||||| ||||||||||    
T  24717159 ttcaccaattttacaaaaccaccaacaacaatccatttatcaacaacaa 24717111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 5e-59; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 172 - 307
Target Start/End: Original strand, 34939594 - 34939729
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  34939594 catgattatgaagaacactaacccccttaccttaggttatgattaattcacacttagacttcactttagctcctaattcttcaatcttcaagtttctccc 34939693  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| ||||||||||||||||||    
T  34939694 tttctctaacccttgttcttcctttctccctctttc 34939729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 170 - 307
Target Start/End: Original strand, 17909820 - 17909957
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17909820 atcatgattatgaagaacactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccc 17909919  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  17909920 cctttctctaacccttgttcttcctttctccctctttc 17909957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 7529228 - 7529354
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||||||| ||||||||||||||||||| |  |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7529228 atgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcccaattcttcaatcttcaagtttccccct 7529327  T
Q  273 ttctttaacccttgttgttcctttctc 299  Q
    |||| ||||||||||| ||||||||||    
T  7529328 ttctctaacccttgttcttcctttctc 7529354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 9730310 - 9730187
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccc 271  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||| |||    
T  9730310 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaattgcttcaatcttcaagtttctccc 9730211  T
Q  272 tttctttaacccttgttgttcctt 295  Q
    ||||| ||||||||||| ||||||    
T  9730210 tttctctaacccttgttcttcctt 9730187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2031709 - 2031816
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||  ||||||| | ||||||||||||||||    
T  2031709 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataactcaccaattccattaaaccaccaacaacaatccatttctc 2031808  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  2031809 aacaacaa 2031816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17471944 - 17471854
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaat 91  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| ||| ||| | |||||||    
T  17471944 accacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcaccaatttcaccaaaacaccaacaacaat 17471854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 9730679 - 9730565
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    ||||||||  ||||||||||||||||||||||||||||||| |||||||||||| || |||| |||    
T  9730679 ttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaatatgtctca 9730580  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  9730579 gcaacaacaacatca 9730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 109123 - 109015
Alignment:
Q  67 atttcacaaaaccactaccaacaatccattt-ctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| | |||||||||    
T  109123 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataatcaacaacatatctcagcaaca 109024  T
Q  165 acaacatca 173  Q
    |||||||||    
T  109023 acaacatca 109015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 10778266 - 10778152
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| |||||||    |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||| ||||| | |||    
T  10778266 ttcaccaatttcacaaaaccaccaccaacatcttatttctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctca 10778167  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  10778166 gcaacaacaacatca 10778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 16105608 - 16105716
Alignment:
Q  67 atttcacaaaaccactaccaacaatccattt-ctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||| | |||||||||    
T  16105608 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacctaagccataattcataatcaacaacatatctcagcaaca 16105707  T
Q  165 acaacatca 173  Q
    |||||||||    
T  16105708 acaacatca 16105716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 17909499 - 17909578
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||  || || |||||||||||    
T  17909499 atttctcaccaccaatcatgatatatgaacacccaagccataatcataaacaacaacatgtcgcatcagcaacaacatca 17909578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 7528902 - 7528973
Alignment:
Q  103 caacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||||| | ||||||||||||||||||    
T  7528902 caacaatcatgatatatgaacacccaagtcataaatcataaacaacaacatatctcagcaacaacaacatca 7528973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25004875 - 25004943
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatt 69  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||| |||| ||||    
T  25004875 accacaaccacaacttataatcatgcatttcatcatattccaacaacaacatgtcataaatcaccaatt 25004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 25005137 - 25005210
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctccta 246  Q
    |||||||||| ||| |||||||||||||| |||| |  |||||||| || ||||||||||||||||||||||||    
T  25005137 atgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 23514521 - 23514635
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    |||||||| ||| ||| ||| |||||||||||||||||||| |||||||| ||| ||||| | |||    
T  23514521 ttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaataattatggtatatgaacacccaagccataaatcataatcaacaacatctctca 23514620  T
Q  159 gcaacaacaacatca 173  Q
      |||||||||||||    
T  23514621 agaacaacaacatca 23514635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 27182503 - 27182429
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| |||||||||||||||||||||   ||||||| |  |||||||||||| ||||||||||||    
T  27182503 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 27182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 18531018 - 18530946
Alignment:
Q  175 gattatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    |||||||| ||| ||||||||||||||||||| || |||||||  ||| |||||||||||||||||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctca-acttaggcttcactttagctcctaa 18530946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 22053785 - 22053711
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| || |||||||  ||| |||||| ||||||||||||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagattatgattaacctca-acttagacttcactttagctcctaa 22053711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 32951011 - 32951086
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||| |||||| ||| ||||||||||||||||||  |  ||||||||||| |||||| ||||| ||||||||||||    
T  32951011 catggttatgatgaagactaacccccttaccttaaataatgattaattcaaacttagacttcaatttagctcctaa 32951086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 108760 - 108686
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| |   ||||||| |  ||||||||||||||||| |||||||    
T  108760 atgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttacctcctaa 108686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 29917957 - 29918038
Alignment:
Q  94 atttctcaacaacaa-tcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||||| ||| ||||||| |||||||||||||||||| |||||| ||||| || || | | ||||||||||||||||    
T  29917957 atttctcaacatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatca 29918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 2032135 - 2032207
Alignment:
Q  175 gattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||| ||| ||||||||||||||||||| |   ||||||  || |||||||||||| ||||||||||||    
T  2032135 gattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 2032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 23507270 - 23507344
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   |||||||||  ||||| ||||||||||| |||||||    
T  23507270 atgattatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaa 23507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 23981437 - 23981363
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||| ||| ||| |||||||||||||||| || |   ||||||| || |||||||||||| ||||||||||||    
T  23981437 atgattttgatgaagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaa 23981363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 8e-58; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 19697313 - 19697176
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  19697313 atcatgattatgaagaacactaacccccttaccttaggttatgattaattcacacttaggcttcactttacctcctaattcttcaatcttcaagtttctc 19697214  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    |||||||  |||||||||| ||||||||||||||||||    
T  19697213 cctttctcaaacccttgttattcctttctccctctttc 19697176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 19707898 - 19707761
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  19707898 atcatgattatgaagaacactaacccccttaccttaggttatgattaattcacacttaggcttcactttacctcctaattcttcaatcttcaagtttctc 19707799  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    |||||||  |||||||||| ||||||||||||||||||    
T  19707798 cctttctcaaacccttgttattcctttctccctctttc 19707761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 8045272 - 8045406
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  8045272 atgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcactttagctcctaattcttcaatcttcaagtttctccct 8045371  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| ||||||||||||||||||    
T  8045372 ttctctaacccttgttcttcctttctccctctttc 8045406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 32460638 - 32460501
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||||||| ||||||||||||||||||| |  |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  32460638 atcatgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 32460539  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  32460538 cctttctctaacccttgttcttcctttctcccactttc 32460501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34395156 - 34395263
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  34395156 accacaatcacaacttatgatcaagcattccatcatgtttcaacaacaacatgtcgtaattcaccaatttcacaaaaccaccaacaacaatccatttctc 34395255  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  34395256 aacaacaa 34395263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 14500144 - 14500010
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| |||  |||||||||||||||||| |  |||||||| || ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  14500144 atgattatgatgaagcctaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcataattcttcaatcttcaagtttccccct 14500045  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| |||||||||||| |||||    
T  14500044 ttctctaacccttgttcttcctttctcccactttc 14500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 9795198 - 9795283
Alignment:
Q  85 caacaatccatttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaaca 170  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9795198 caacaattcatttctcaacaacaatcatgatatatcaacacccaagccataatcataaacaacaacatgtatcaacaacaacaaca 9795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 14996121 - 14996200
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  14996121 atttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaacaacatca 14996200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 19697634 - 19697555
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  19697634 atttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaacaacatca 19697555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 19708219 - 19708140
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  19708219 atttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaacaacatca 19708140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 9795532 - 9795657
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| ||  |||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||||||| |||||||||||||| ||||    
T  9795532 catgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc 9795631  T
Q  272 tttctttaacccttgttgttcctttc 297  Q
     ||   ||||||||||| ||||||||    
T  9795632 ctttgctaacccttgttcttcctttc 9795657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 19020792 - 19020917
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| |   |||||||||||||||||||||| |||| |||||| ||||  ||||||| ||||||||||||||| |||||||||||||||||||    
T  19020792 catgattatgatggtaactaacccccttaccttaggttatgatcaattcaaacttgagcttcaccttagctcctaattctccaatcttcaagtttccccc 19020891  T
Q  272 tttctttaacccttgttgttcctttc 297  Q
    |||   ||||||||||| ||||||||    
T  19020892 ttttgctaacccttgttcttcctttc 19020917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 16523146 - 16523270
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||| ||||||| |||||||||||||| ||||     
T  16523146 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcataattctccaatcttcaagttttccccc 16523245  T
Q  273 ttctttaacccttgttgttcctttc 297  Q
    ||   ||||||||||| ||||||||    
T  16523246 tttgctaacccttgttcttcctttc 16523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 16522783 - 16522891
Alignment:
Q  67 atttcacaaaaccactaccaacaatccattt-ctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| | |||||||||    
T  16522783 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataatcaacaacatatctcagcaaca 16522882  T
Q  165 acaacatca 173  Q
    |||||||||    
T  16522883 acaacatca 16522891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 22738577 - 22738698
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttccccct 22738676  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    |||| ||| ||||||| ||||||    
T  22738677 ttctctaa-ccttgttcttcctt 22738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 9295688 - 9295767
Alignment:
Q  95 tttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||| | ||||||||||||||||||    
T  9295688 tttctcaacaacaatcatgatatatgaacacccaagccataattcattatcaacaacatatctcagcaacaacaacatca 9295767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 34177830 - 34177767
Alignment:
Q  6 aaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatt 69  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  34177830 aaccacaacttataatcatgcattccatcatatttcaacaacaacaagtcataattcaccaatt 34177767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 7132327 - 7132247
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||| ||||| | ||||||||||||||||||    
T  7132327 atttctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaacaacaacatca 7132247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 40885494 - 40885418
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctccta 246  Q
    ||||||||||||| |||  |||||||||||||||||| |  |||||||| || ||||||||||||||||||||||||    
T  40885494 atcatgattatgatgaattctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19559422 - 19559481
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaat 60  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||    
T  19559422 accacaaccacaacttataatcatgcattccatcacaattcaacaacaacatgtcataat 19559481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 273
Target Start/End: Original strand, 18248540 - 18248626
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccctt 273  Q
    ||||||||||||||||||| |  ||||||||    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18248540 actaacccccttaccttagatgatgattaatcttaacttaagcttcactttaactcctaattgcttcaatcttcaagtttccccctt 18248626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 8044934 - 8045015
Alignment:
Q  94 atttctcaacaacaat-catgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||| ||||| | |||||| |||||||||||    
T  8044934 atttctcatcaacaattcatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcagcaacaacatca 8045015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 15675041 - 15674967
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| || |||||||  ||| |||||||||||||||||||||||||    
T  15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctca-acttaggcttcactttagctcctaa 15674967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 8378543 - 8378615
Alignment:
Q  223 acttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccctttctttaacccttgttgttcctt 295  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||||||||| || ||| ||||||| ||||||    
T  8378543 acttaagcttcactttaactcctaattgcttcaatcttcaagtttcccccttcctctaa-ccttgttcttcctt 8378615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 5682824 - 5682776
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  5682824 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 5682776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 25119505 - 25119457
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  25119505 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 25119457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 10104202 - 10104128
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| || |||||||  ||| |||||||||| ||||||||||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagattatgattaacctca-acttaggctttactttagctcctaa 10104128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 15135939 - 15135865
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 15135865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 15272243 - 15272169
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 15272169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 20000683 - 20000796
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagcc-ataatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| |  ||||    |||||||| ||||||| ||| ||||||||||||||||||   |||||||  ||| ||||| | |||    
T  20000683 ttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctca 20000782  T
Q  159 gcaacaacaacatc 172  Q
    ||||||||||||||    
T  20000783 gcaacaacaacatc 20000796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 32460937 - 32460880
Alignment:
Q  96 ttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacat 152  Q
    |||||| |||||||||||||||||| ||||||||| ||| |||||||||||| |||||    
T  32460937 ttctcaccaacaatcatgatatatgcacacccaagtcataaatcataaacaacaacat 32460880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 31132628 - 31132699
Alignment:
Q  176 attatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    ||||||| ||| ||||||||||||||||||| || |||||||  ||| ||||||||| |||||||||||||||    
T  31132628 attatgatgaagactaacccccttaccttagattatgattaacctca-acttaggctccactttagctcctaa 31132699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 33241011 - 33241085
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| || |||||||  ||| ||||||||||| ||||| |||||||    
T  33241011 atgattatgatgaagactaacccccttaccttagattatgattaacctca-acttaggcttcgctttaactcctaa 33241085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 13246737 - 13246811
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  13246737 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 13246811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 172 - 307
Target Start/End: Complemental strand, 7128 - 6993
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||    
T  7128 catgattatgaagaacactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagtttctccc 7029  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| ||||||||||||||||||    
T  7028 tttctctaacccttgttcttcctttctccctctttc 6993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 49787 - 49650
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  49787 atcatgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 49688  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  49687 cctttctctaacccttgttcttcctttctcccactttc 49650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 50110 - 50030
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||    
T  50110 atttttcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcaacaacaacatca 50030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 11477130 - 11476993
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  11477130 atcatgattatgaagaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccc 11477031  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  11477030 cctttctctaacccttgttcttcctttctcccactttc 11476993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13838795 - 13838902
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  13838795 accacaaccacaacttatgatcattcattccatcatatttcaacaacaacatgtcgtaattcaccaatttcacaaaaccaccaacaacaatccatttctc 13838894  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  13838895 aacaacaa 13838902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 14285289 - 14285423
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| ||||||||||||||||||| |  |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaattcttcaatcttcaagtttccccct 14285388  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| |||||||||||| |||||    
T  14285389 ttctctaacccttgttcttcctttctcccactttc 14285423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 19947026 - 19947153
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcct-aattcttcaatcttcaagtttccccc 271  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||| ||| |||||||||||||||||| |||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaaatccttcaatcttcaagtttctccc 19947125  T
Q  272 tttctttaacccttgttgttcctttctc 299  Q
    ||||| ||||||||||| ||||||||||    
T  19947126 tttctctaacccttgttcttcctttctc 19947153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 16933901 - 16933779
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    ||||||||||  || |||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||||||| |||||||||||||| |||||    
T  16933901 atgattatgataaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccct 16933802  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    |||| ||||||||||| ||||||    
T  16933801 ttctctaacccttgttcttcctt 16933779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 8269006 - 8268927
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  8269006 atttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaataacatca 8268927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 8276106 - 8276027
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  8276106 atttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaataacatca 8276027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22275100 - 22275175
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaa 76  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  22275100 accacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaa 22275175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15468705 - 15468630
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaa 76  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  15468705 accacaaccacaacttatgatcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaa 15468630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 12902040 - 12901915
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| ||  |||||||||||||||||||||| |||| |||||| ||||  ||||||||||| ||||||||||| |||||||||| ||| ||||    
T  12902040 catgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttaactcctaattctccaatcttcaaattttcccc 12901941  T
Q  272 tttctttaacccttgttgttcctttc 297  Q
     ||   ||||||||||| ||||||||    
T  12901940 ctttgctaacccttgttcttcctttc 12901915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 15938411 - 15938302
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccctttctttaacccttgt 287  Q
    |||||||||||||||||||| | |||| |||||| ||||  ||||||||||||||||||||||| |||||||||||||| |||| ||   ||||||||||    
T  15938411 actaacccccttaccttaggctatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgctaacccttgt 15938312  T
Q  288 tgttcctttc 297  Q
    | ||||||||    
T  15938311 tcttcctttc 15938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 16934270 - 16934156
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    ||||||||  |||||||||||| |||||| ||||||||||||| |||||||||| ||||||| |||    
T  16934270 ttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatttatgaatacccaagccataaatcataaacaacaacatgtctca 16934171  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  16934170 gcaacaacaacatca 16934156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48421636 - 48421704
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatt 69  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  48421636 accacaaccacaatttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatt 48421704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 11477453 - 11477373
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||| |||||||||||    
T  11477453 atttttcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcagcaacaacatca 11477373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 18910959 - 18911067
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||| ||||| | |||||||||    
T  18910959 aatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 18911058  T
Q  165 acaacatca 173  Q
    |||||||||    
T  18911059 acaacatca 18911067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 9303361 - 9303282
Alignment:
Q  95 tttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||  ||| ||||| | ||||||||||||||||||    
T  9303361 tttctcaacaacaatcatggtatatgaacacccaagccataattcatagtcaacaacatatctcagcaacaacaacatca 9303282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 15936569 - 15936460
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccctttctttaacccttgt 287  Q
    |||||||||| ||||||||| |  ||| |||||| ||||  |||||||||| |||||||||||| |||||||||||||| |||| ||   ||||||||||    
T  15936569 actaacccccataccttaggctacgatcaattcaaacttgagcttcacttttgctcctaattctccaatcttcaagttttccccctttgctaacccttgt 15936470  T
Q  288 tgttcctttc 297  Q
    | ||||||||    
T  15936469 tcttcctttc 15936460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 11986113 - 11986038
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||| ||| ||||||||||||||||||| |  |||||||| || |||||||||||| ||||||||||||    
T  11986113 catgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcaatttagctcctaa 11986038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 297
Target Start/End: Complemental strand, 9303035 - 9302950
Alignment:
Q  211 tgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccctttctttaacccttgttgttcctttc 297  Q
    |||| |||||| ||||  ||||||||||| ||||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||    
T  9303035 tgatcaattcaaacttgagcttcactttaactcctaattctccaatcttcaagtttcccccttt-gctaacccttgttcttcctttc 9302950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14177226 - 14177164
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||||| |||||||||||||||| | |||||| |||||||||| |||||||    
T  14177226 accacaaccacaacttataatcatgcattccatcacaattcaaccacaacatgtcataattca 14177164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18969980 - 18970042
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||||| ||||||| |||||||| | ||||||||||||||||| |||||||    
T  18969980 accacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattca 18970042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 44229293 - 44229414
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  44229293 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggtttcactttatctcctaattgcttcaatcttcaagtttccccct 44229392  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  44229393 tcctctaa-ccttgttcttcctt 44229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 14284963 - 14285034
Alignment:
Q  103 caacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||| ||||| | | ||||||||||||||||    
T  14284963 caacattcatgatatatgaacacccaagtcataaatcataaacaacaacatatctgagcaacaacaacatca 14285034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 16261777 - 16261851
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   |||||||||  |||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaa 16261851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 51961063 - 51960990
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctccta 246  Q
    |||||||||| ||| ||||||||||||||||||| |  |||||||| || |||||| |||||||||| ||||||    
T  51961063 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctccta 51960990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 17956281 - 17956233
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  17956281 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 17956233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39656402 - 39656449
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaaca 48  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  39656402 accacaaccacaacttataatcatgcatgccatcatatttgaacaaca 39656449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 53771365 - 53771439
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 53771439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 17204656 - 17204772
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgta 155  Q
    ||||||| || || |||||||||||| ||||||  ||||||||| |||| ||||||||  ||| |||||||||||||| |||||| ||||| || ||       
T  17204656 aattcaccaactttacaaaaccactaacaacaactcatttctcatcaacaaatcatgaattataaacacccaagccatgaatcatcaacaacaatattac 17204755  T
Q  156 tcagcaacaacaacatc 172  Q
    | |||||||||||||||    
T  17204756 ttagcaacaacaacatc 17204772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 6228866 - 6228799
Alignment:
Q  107 aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| |||||||||||||||||| |||||| ||||| || || | | ||||||||||||||||    
T  6228866 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatttcttagcaacaacaacatca 6228799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 7853948 - 7854015
Alignment:
Q  67 atttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat 134  Q
    |||| |||||||||| | ||||||  |||||||||||||||||||||||  ||| | |||||||||||    
T  7853948 attttacaaaaccaccaacaacaactcatttctcaacaacaatcatgattcatgcaaacccaagccat 7854015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 12952970 - 12953037
Alignment:
Q  107 aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| |||||||||||||||||| |||||| ||||| || || | | ||||||||||||||||    
T  12952970 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatca 12953037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 2050115 - 2050189
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  2050115 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 2050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 38168237 - 38168311
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  38168237 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 38168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 172 - 307
Target Start/End: Original strand, 41964 - 42099
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| ||| |||||||||||||||||||||  |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41964 catgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 42063  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| |||||||||||| |||||    
T  42064 tttctctaacccttgttcttcctttctcccactttc 42099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 28031169 - 28031038
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||| ||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  28031169 atcatgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccc 28031070  T
Q  270 cctttctttaacccttgttgttcctttctccc 301  Q
    ||||||| ||||||||||| ||||||||||||    
T  28031069 cctttctctaacccttgttcttcctttctccc 28031038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25601923 - 25602030
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||    
T  25601923 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatccatttctc 25602022  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  25602023 aacaacaa 25602030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 33128372 - 33128501
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcct-aattcttcaatcttcaagtttccccc 271  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||| ||| |||||||||||||| |||    
T  33128372 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaaatcctttaatcttcaagtttctccc 33128471  T
Q  272 tttctttaacccttgttgttcctttctccc 301  Q
    ||||| ||||||||||| ||||||||||||    
T  33128472 tttctctaacccttgttcttcctttctccc 33128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 17204659 - 17204794
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa-ttcttcaatcttcaagtttccccc 271  Q
    |||||||||| ||| |||||||||||||| ||||||| |||||||| || |||||| |||||||||| ||||||| |||||||||||||||||||| |||    
T  17204659 atgattatgatgaagactaacccccttactttaggttatgattaatccaaacttagacttcactttaactcctaatttcttcaatcttcaagtttcgccc 17204758  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| |||||||||||| |||||    
T  17204759 tttctctaacccttgttcttcctttctcccactttc 17204794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 7507790 - 7507665
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaag-tttcccc 270  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||| ||||  | ||||||||| ||||||||||| ||||||||||| |||||||    
T  7507790 catgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagtttcactttaactcctaattctccaatcttcaagctttcccc 7507691  T
Q  271 ctttctttaacccttgttgttcctttc 297  Q
    ||||  | |||||||||| ||||||||    
T  7507690 ctttgct-aacccttgttcttcctttc 7507665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 23777995 - 23777870
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| ||  ||||||||| |||||||||||| |||| |||||| | ||  ||||||||||||||||||||||| |||||||| ||||| ||||    
T  23777995 catgattatgatgataactaacccctttaccttaggttatgatcaattcaaatttgagcttcactttagctcctaattctccaatcttctagttttcccc 23777896  T
Q  272 tttctttaacccttgttgttcctttc 297  Q
     ||   ||||||||||||||||||||    
T  23777895 ctttgctaacccttgttgttcctttc 23777870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 25213012 - 25213121
Alignment:
Q  67 atttcacaaaaccactaccaacaatccattt--ctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaac 163  Q
    |||| |||||||||| ||||||||  |||||  ||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||| | ||||||||    
T  25213012 attttacaaaaccaccaccaacaactcatttttctcaacaacaatcatgatatatgaacacccaagccataattcattatcaacaacatatctcagcaac 25213111  T
Q  164 aacaacatca 173  Q
    ||||||||||    
T  25213112 aacaacatca 25213121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 28031500 - 28031421
Alignment:
Q  95 tttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||| ||||||||||||||    
T  28031500 tttctcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcaacaacaacaacatca 28031421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 21142203 - 21142324
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21142203 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttccccct 21142302  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  21142303 tcctctaa-ccttgttcttcctt 21142324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 42178265 - 42178151
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    |||||||| |||||||  || |||||||||||||||||||||| |||||| ||| ||||| | |||    
T  42178265 ttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaacaattttggtatatgaacacccaagccataagtcataatcaacaacatatctca 42178166  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  42178165 gcaacaacaacatca 42178151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 307
Target Start/End: Original strand, 15633593 - 15633672
Alignment:
Q  229 gcttcactttagctccta--attcttcaatcttcaagtttccccctttctttaacccttgttgttcctttctccctctttc 307  Q
    |||||||||| |||||||  |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  15633593 gcttcacttttgctcctatgattcttcaatcttcaagtttcccc-tttctctaacccttgttcttcctttctcccactttc 15633672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 12636158 - 12636050
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    |||||||| ||||||| ||| ||||||||||||||| |||| |||||||| ||| ||||| | |||||||||    
T  12636158 aatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaacacccaatccataaatcataatcaacaacatatctcagcaaca 12636059  T
Q  165 acaacatca 173  Q
    |||||||||    
T  12636058 acaacatca 12636050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 24826980 - 24826901
Alignment:
Q  95 tttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||||||||||||||||| |||| |||||||||||||| |||||| ||| ||| | | ||||||||||||||||||    
T  24826980 tttctcaacaacaatcatgataaatgagcacccaagccataattcataatcaacaacgtatctcagcaacaacaacatca 24826901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 5888578 - 5888457
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  5888578 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaagcttcactttagctcctaattgcgtcaatcttcaagtttccccct 5888479  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  5888478 tcctctaa-ccttgttcttcctt 5888457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 8943812 - 8943920
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    ||||||||  |||||| ||| ||||||||||||||| |||| |||||||| ||| ||||| | |||||||||    
T  8943812 aatttcacaaaaccaccaacaacatcttatttctcattaacaattatggtatatgaacacccaatccataaatcataatcaacaacatatctcagcaaca 8943911  T
Q  165 acaacatca 173  Q
    |||||||||    
T  8943912 acaacatca 8943920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 12641932 - 12641824
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    |||||||| ||||| | ||| |||||||||||||||||||| |||||||  ||| ||||| | |||||||||    
T  12641932 aatttcacaaaaccaccaacaacatcttatttctcatcaacacttatggtatatgaacacccaagccataaatcatactcaacaacatatctcagcaaca 12641833  T
Q  165 acaacatca 173  Q
    |||||||||    
T  12641832 acaacatca 12641824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 15633207 - 15633286
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||| | ||| ||||| | ||||||||||||||||||    
T  15633207 atttctcactaacaatcatgatatatgaacacccaagccataaatcat-agcaacaacatatctcagcaacaacaacatca 15633286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 17204325 - 17204404
Alignment:
Q  95 tttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||||||||||||||||||||||||   ||||||||| |||||| ||| || || | ||||||||||||||||||    
T  17204325 tttctcaacaacaatcatgatatatgaacatataagccataattcataatcaacaatatatctcagcaacaacaacatca 17204404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 25265336 - 25265261
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||| ||| |||||||||||||| |||| |  |||||||| || || ||||||||||||||||||||||    
T  25265336 catgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaa 25265261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 22274681 - 22274730
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaat 109  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  22274681 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaat 22274730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 67865 - 67933
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatt 69  Q
    |||||||| |||| |||| ||||| |||||||||||||| ||||||||||||||| ||| |||| ||||    
T  67865 accacaacgacaaattataatcatacattccatcatattacaacaacaacatgtcataaatcaccaatt 67933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 19433614 - 19433506
Alignment:
Q  67 atttcacaaaaccactaccaacaatccatttctcaacaacaa-tcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||||||| |||||| ||||||  |||||||||||||||||| |||||| ||||| || || | | |||||||    
T  19433614 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatctcttagcaaca 19433515  T
Q  165 acaacatca 173  Q
    |||||||||    
T  19433514 acaacatca 19433506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 24341341 - 24341267
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaa-ttcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| || |||||||  ||| |||||||||||| ||||||||||||    
T  24341341 atgattatgatgaagactaacccccttaccttagattatgattaacctca-acttaggcttcattttagctcctaa 24341267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 3798899 - 3798785
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagcc-ataatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| |  ||||    |||||||| ||||||| ||| ||||||||||||||||||   |||||||  ||| ||||| | |||    
T  3798899 ttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctca 3798800  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  3798799 gcaacaacaacatca 3798785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 7321586 - 7321630
Alignment:
Q  11 caacttatgatcatgcattccatcatatttcaacaacaacatgtc 55  Q
    |||||||| |||||||||||||||| | |||||||||||||||||    
T  7321586 caacttataatcatgcattccatcaaaattcaacaacaacatgtc 7321630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 24884692 - 24884759
Alignment:
Q  107 aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| |||||||||||||| ||| |||||| ||||| || || ||| ||||||||||||||||    
T  24884692 aatcatgatttatgaacacccaagtcatgaatcatcaacaacaatatctattagcaacaacaacatca 24884759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 463043 - 463117
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  463043 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 463117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 3496 - 3415
Alignment:
Q  93 catttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| | ||||||||||  |||||||||||||||||| |||||| | ||| |||||   | ||||||||||||||||    
T  3496 catttctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatca 3415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 22283914 - 22283963
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaat 109  Q
    ||||| |||||||||||||||| | ||||||| |||||||||||| ||||    
T  22283914 ttcaccaatttcacaaaaccaccaacaacaattcatttctcaacagcaat 22283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 16299921 - 16299784
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||| |||||| |||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  16299921 atcatgattaagaagaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttcac 16299822  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  16299821 cctttctctaacccttgttcttcctttctcccactttc 16299784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 170 - 307
Target Start/End: Original strand, 19629645 - 19629781
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||  ||||||||| ||||||||||||| ||||||||||||||| |    
T  19629645 atcatgattatgaagaacactaacccccttaccttaggttatgatcaattcaaatttgagcttcactt-agctcctaattctccaatcttcaagtttctc 19629743  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  19629744 cctttctttaacccttgttcttcctttctccctctttc 19629781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 13620744 - 13620618
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa-ttcttcaatcttcaagtttcccc 270  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  13620744 catgattatgaagaagactaacccccttaccttaggttatgatcaattcaaactcaggcttcactttagctcctaatttcttcaatcttcaagttttccc 13620645  T
Q  271 ctttctttaacccttgttgttcctttc 297  Q
    |||||| ||||||||||| ||||||||    
T  13620644 ctttctctaacccttgtttttcctttc 13620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 15742150 - 15742017
Alignment:
Q  175 gattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattc-ttcaatcttcaagtttccccctt 273  Q
    ||||||||  || |||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  15742150 gattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaaatccttcaatcttcaagtttctccctt 15742051  T
Q  274 tctttaacccttgttgttcctttctccctctttc 307  Q
    ||| ||||||||||| ||||||||||||||||||    
T  15742050 tctataacccttgttcttcctttctccctctttc 15742017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 32276691 - 32276557
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| ||||||||||||||||||| |  |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaattcttcaatcttcaagcttccccct 32276592  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| ||| ||||| || |||||    
T  32276591 ttctctaacccttgttcttcatttcttccactttc 32276557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 18002427 - 18002292
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcct-aattcttcaatcttcaagtttccccc 271  Q
    ||||||||||  || |||||||||||||||||||||| ||||||||  | |||||| |||||||||||||||| ||| |||||||||||||||||| ||     
T  18002427 atgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctcctaaatccttcaatcttcaagtttctcct 18002328  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| |||||||||||| |||||    
T  18002327 tttctctaacccttgttcttcctttctcccactttc 18002292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 19629323 - 19629403
Alignment:
Q  93 catttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  19629323 catttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaacaacatca 19629403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 18823315 - 18823191
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| || |||||  |||||||||||||||||||||| ||||||| |||||| ||||     
T  18823315 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcactttagctcctaattctccaatctttaagttttccccc 18823216  T
Q  273 ttctttaacccttgttgttcctttc 297  Q
    ||   ||||||||||| ||||||||    
T  18823215 tttgctaacccttgttcttcctttc 18823191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 18839170 - 18839046
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| || ||||| |||||||||||||| |||||||| ||||||| |||||| ||||     
T  18839170 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcactttagcttctaattctccaatctttaagttttccccc 18839071  T
Q  273 ttctttaacccttgttgttcctttc 297  Q
    ||   ||||||||||| ||||||||    
T  18839070 tttgctaacccttgttcttcctttc 18839046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 32277025 - 32276946
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  32277025 atttctcaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatatctcagcaacaacaacatca 32276946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 18087113 - 18087005
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| |||||||    |||||||| ||||||| |||||||||||||||||||||||| |||||||| ||| ||||| | |||||||||    
T  18087113 aatttcacaaaaccaccaccaacatcttatttctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 18087014  T
Q  165 acaacatca 173  Q
    |||||||||    
T  18087013 acaacatca 18087005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 4991037 - 4991145
Alignment:
Q  67 atttcacaaaaccactaccaacaatccattt-ctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||| |||||||||||||||||||||||||||||||||||| || |||| | ||| ||||| | |||||||||    
T  4991037 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccaaaattcatgatcaacaacatatctcagcaaca 4991136  T
Q  165 acaacatca 173  Q
    |||||||||    
T  4991137 acaacatca 4991145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 16231858 - 16231966
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||| ||||| | |||||||||    
T  16231858 aatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 16231957  T
Q  165 acaacatca 173  Q
    |||||||||    
T  16231958 acaacatca 16231966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 16300243 - 16300163
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||||||||||||||||    
T  16300243 atttttcatcaacaatcatgatatatgaacacccaagccataaatcatatacaacaacatatctcagcaacaacaacatca 16300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15889902 - 15889840
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||||| |||||||||||||||| | |||| |||||||||||| |||||||    
T  15889902 accacaaccacaacttataatcatgcattccatcacaattcatcaacaacatgtcataattca 15889840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 18381974 - 18381857
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgta 155  Q
    ||||||| |||||||||||||||| | ||||||  ||||||||| |||| ||||||||  |||||| ||||||||||| |||||| ||||| |||||       
T  18381974 aattcaccaatttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcac 18381875  T
Q  156 tcagcaacaacaacatca 173  Q
    | ||||||||||||||||    
T  18381874 ttagcaacaacaacatca 18381857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 13621084 - 13620976
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    ||| |||| ||||||| ||| |||||||||||||||| ||||| |||||| ||| ||||| | |||||||||    
T  13621084 aatttcacaaaaccaccaacaacatcttattgctcatcaacaattatggtatatgaacacccaagtcataattcataatcaacaacatatctcagcaaca 13620985  T
Q  165 acaacatca 173  Q
    |||||||||    
T  13620984 acaacatca 13620976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 27751741 - 27751816
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||| ||| ||||||||||||||||||| |   ||||||| || |||||||||||| ||||||||||||    
T  27751741 catgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttcaatttagctcctaa 27751816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 23148303 - 23148377
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| |||||||||||||||||||||   ||||||| |  |||||||||||| ||||||||||||    
T  23148303 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 23148377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 23153754 - 23153828
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| |||||||||||||||||||||   ||||||| |  |||||||||||| ||||||||||||    
T  23153754 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 23153828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25640751 - 25640697
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtc 55  Q
    |||||||| ||||||||| |||||||||||||||| | |||||||||||||||||    
T  25640751 accacaacaacaacttataatcatgcattccatcaaaattcaacaacaacatgtc 25640697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 19983588 - 19983540
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  19983588 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 19983540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 22585737 - 22585681
Alignment:
Q  6 aaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattc 62  Q
    ||||||||||||| |||||||||| ||||| | ||||||||||||||||| ||||||    
T  22585737 aaccacaacttataatcatgcattgcatcacaattcaacaacaacatgtcataattc 22585681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 22590568 - 22590512
Alignment:
Q  6 aaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattc 62  Q
    ||||||||||||| |||||||||| ||||| | ||||||||||||||||| ||||||    
T  22590568 aaccacaacttataatcatgcattgcatcacaattcaacaacaacatgtcataattc 22590512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 35015454 - 35015406
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  35015454 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 35015406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 15005099 - 15005040
Alignment:
Q  4 acaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    ||||||||||||||| ||||| ||||| |||| | ||||||||||||||||| |||||||    
T  15005099 acaaccacaacttataatcattcattctatcacaattcaacaacaacatgtcataattca 15005040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 35009385 - 35009314
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctc 243  Q
    ||||||||||| ||| |||||||||||||| |||| |  |||||||| || |||| ||||||||||||||||    
T  35009385 catgattatgatgaagactaacccccttactttagataatgattaatccaaactttggcttcactttagctc 35009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 23977729 - 23977843
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagcc-ataatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| |  ||||    |||||||| ||||||| ||| ||||||||||||||||||   |||||||  ||| ||||| | |||    
T  23977729 ttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctca 23977828  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  23977829 gcaacaacaacatca 23977843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 23995247 - 23995321
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 23995321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 26090059 - 26090133
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || |||||||||||||||||||||  || | |||  | |||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctcctaa 26090133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 29666180 - 29666255
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||| ||| |||||||| ||||  |||| |  |||||||| || |||||||||||| ||||||||||||    
T  29666180 catgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggcttcaatttagctcctaa 29666255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 25651242 - 25651310
Alignment:
Q  106 caatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||||| |||||||||||||||||| |||||| ||||| || ||   | ||||||||||||||||    
T  25651242 caatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatca 25651310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 170 - 307
Target Start/End: Original strand, 5546 - 5683
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    ||||||||||||| ||| |||||||||||||||||||||  |||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  5546 atcatgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaattcttcaatcttcaagtttccc 5645  T
Q  270 cctttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||||| ||||||||||| |||||||||||| |||||    
T  5646 cctttctctaacccttgttcttcctttctcccactttc 5683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 5215 - 5294
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  5215 atttcttaccaacaatcatgatatatgaacacccaagccataatcataaacaacaacatgtctcagcaacaacaacatca 5294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 9447 - 9319
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa-ttcttcaatcttcaagtttcc 268  Q
    ||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  9447 atcatgattatgaagaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaatttcttcaatcttcaagtttcc 9348  T
Q  269 ccctttctttaacccttgttgttcctttc 297  Q
    |||||||| ||||||||||| ||||||||    
T  9347 ccctttctctaacccttgttcttcctttc 9319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1298 - 1405
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||    
T  1298 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatccatttctc 1397  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  1398 aacaacaa 1405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29990 - 30097
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||    
T  29990 accacaacaacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatccatttctc 30089  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  30090 aacaacaa 30097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 3e-42; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 171806 - 171913
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||||||||||     
T  171806 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgttgtaattcaccaatttcacaaaaccaccaacaacaatccatttctt 171905  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  171906 aacaacaa 171913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 177509 - 177616
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||||||||||     
T  177509 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgttgtaattcaccaatttcacaaaaccaccaacaacaatccatttctt 177608  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  177609 aacaacaa 177616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 164906 - 164803
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |    
T  164906 atcatgattatgaagaacactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagtttctc 164807  T
Q  270 cctt 273  Q
    ||||    
T  164806 cctt 164803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 165223 - 165148
Alignment:
Q  95 tttctcaacaacaatcatgatatatgaacacccaagccataatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||    
T  165223 tttctcaccaacaatcatgatatatgaacacccaagccataatcataaac---aacatgtctcagcaacaacaacatca 165148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 172210 - 172284
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  172210 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 177913 - 177987
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  177913 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 177987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 5508 - 5375
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| |||||||||||||||||||||  |||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa-tcttcaatcttcaagtttccccct 5410  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| |||||||||||| |||||    
T  5409 ttctctaacccttgttcttcctttctcccactttc 5375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 5844 - 5763
Alignment:
Q  93 catttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||| ||||| | ||||||||||||||||||    
T  5844 catttctcaccaacaatcatgacatatgaacacccaagtcataaatcataaacaacaacatttctcagcaacaacaacatca 5763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 18026 - 18160
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| ||||||||||||||||||| |  |||||||| || ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaattcttcaatcttcatgtttccccct 18125  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| |||||||||||| |||||    
T  18126 ttctctaacccttgttcttcctttctcccactttc 18160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 17694 - 17768
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaaca 167  Q
    |||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||| ||| ||||||||||||    
T  17694 atttctcaccaacaatcatgatatatgagcacccaagccataaatcataaacaacaacttgtctcagcaacaaca 17768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 34340 - 34206
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| ||||||||||||||||||| |  |||||||| || |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaattcttcaatctttaagtttccccct 34241  T
Q  273 ttctttaacccttgttgttcctttctccctctttc 307  Q
    |||| ||||||||||| |||||||||||| |||||    
T  34240 ttctctaacccttgttcttcctttctcccactttc 34206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 34654 - 34597
Alignment:
Q  96 ttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacat 152  Q
    |||||| ||||||||||| |||||||||||||||| ||| |||||||||||| |||||    
T  34654 ttctcaccaacaatcatgttatatgaacacccaagtcataaatcataaacaacaacat 34597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 95295 - 95425
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcct-aattcttcaatcttcaagtttcc 268  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||| || || |||||||||||||||||||| ||| ||||||||||||||||||     
T  95295 atcatgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctcctaaatccttcaatcttcaagtttct 95394  T
Q  269 ccctttctttaacccttgttgttcctttctc 299  Q
    |||||||| ||||||||||| ||||||||||    
T  95395 ccctttctctaacccttgttcttcctttctc 95425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 47480976 - 47480847
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| ||||||||||||||||||| |  |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttacctcctaattcttcaatcttcaagtttccccct 47480877  T
Q  273 ttctttaaccc-ttgttgttcctttctccc 301  Q
    |||| |||||| ||||| ||||||||||||    
T  47480876 ttctctaaccctttgttcttcctttctccc 47480847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 371417 - 371540
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccc 271  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||| ||||||| |||||||||| |||    
T  371417 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaattgcttcaatattcaagtttctccc 371516  T
Q  272 tttctttaacccttgttgttcctt 295  Q
    ||||| ||||||||||| ||||||    
T  371517 tttctctaacccttgttcttcctt 371540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 371048 - 371162
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    ||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||     
T  371048 ttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatgtctcg 371147  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  371148 gcaacaacaacatca 371162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 18980311 - 18980203
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| |||||||    |||||||| ||||||| |||||||||||||||||||||||| |||||||| ||| ||||| | |||||||||    
T  18980311 aatttcacaaaaccaccaccaacatcttatttctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 18980212  T
Q  165 acaacatca 173  Q
    |||||||||    
T  18980211 acaacatca 18980203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 18253777 - 18253667
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaag--tttccccctttctttaaccctt 285  Q
    |||||||||||||||||||||| |||| |||||| | ||  ||||||||||||||||||||||| |||||||||||  |||||||||||   ||||||||    
T  18253777 actaacccccttaccttaggttatgatcaattcaaatttgagcttcactttagctcctaattctccaatcttcaagtttttcccccttt-gctaaccctt 18253679  T
Q  286 gttgttcctttc 297  Q
    ||| ||||||||    
T  18253678 gttcttcctttc 18253667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 10000318 - 10000197
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttctccct 10000219  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  10000218 tcctctaa-ccttgttcttcctt 10000197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 14251194 - 14251080
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    |||||||| ||||||| ||| ||| |||||||||||||||||| |||||| ||| ||||| | |||    
T  14251194 ttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatctgaacacccaagccataagtcataatcaacaacatatctca 14251095  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  14251094 gcaacaacaacatca 14251080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 48622614 - 48622493
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  48622614 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttctccct 48622515  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  48622514 tcctctaa-ccttgttcttcctt 48622493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 15862225 - 15862341
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    |||||||||||  |  |||||||||||||||||||||| |||| |||||| ||||  ||||||  ||| ||||||||||| |||||||||||||| ||||    
T  15862225 catgattatgataataactaacccccttaccttaggttatgatcaattcaaacttgagcttcaacttaactcctaattctccaatcttcaagttttcccc 15862324  T
Q  272 tttctttaacccttgtt 288  Q
     ||   |||||||||||    
T  15862325 ctttgctaacccttgtt 15862341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 15927534 - 15927642
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccata-atcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| | |||||    |||||||| ||||||| ||| ||| ||||||||||||||||| ||||||| ||| ||||| | |||||||||    
T  15927534 aatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatgtgaacacccaagccatagatcataatcaacaacatatctcagcaaca 15927633  T
Q  165 acaacatca 173  Q
    |||||||||    
T  15927634 acaacatca 15927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 13321333 - 13321408
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||| ||| ||||||||||||||||||| |  |||||||| || || ||||||||||||||||||||||    
T  13321333 catgattatgatgaagactaacccccttaccttagataatgattaatccaaacctaggcttcactttagctcctaa 13321408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13352011 - 13352073
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||||| |||||||||||||||  | ||||||||||||||||| |||||||    
T  13352011 accacaaccacaacttataatcatgcattccatcccaattcaacaacaacatgtcataattca 13352073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 25124450 - 25124524
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||||||||||||||||| |  ||||||||  | |||||||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaa 25124524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 16418805 - 16418926
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattctt-caatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||| | ||||||||||||||||||||| || ||||||||||||||||||||    
T  16418805 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaactaaagcttcactttagctcctaattgtttcaatcttcaagtttccccct 16418904  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  16418905 tcctctaa-ccttgttcttcctt 16418926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 2029244 - 2029318
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   |||||||||  |||||||||||| ||||||||||||    
T  2029244 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaa 2029318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 13758330 - 13758444
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagcc-ataatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| |  ||||    |||||||| ||||||| ||| ||||||||||||||||||   |||||||  ||| ||||| | |||    
T  13758330 ttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaacacccaagcctcaaatcatactcaacaacatatctca 13758429  T
Q  159 gcaacaacaacatca 173  Q
    |||||||||||||||    
T  13758430 gcaacaacaacatca 13758444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 36052971 - 36053045
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  36052971 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 36053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 42056220 - 42056146
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 42056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 15709469 - 15709543
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaat-tcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| ||||| || |||||||||| || |||||||  ||| |||||||||||||||||||||||||    
T  15709469 atgattatgatgaagactaatcctcttaccttagattatgattaacctca-acttaggcttcactttagctcctaa 15709543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 15978034 - 15977975
Alignment:
Q  4 acaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    ||||||||||||||| |||||| |||| | || | ||||||||||||||||| |||||||    
T  15978034 acaaccacaacttataatcatgtattcaaccacaattcaacaacaacatgtcataattca 15977975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 16915169 - 16915102
Alignment:
Q  107 aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    ||||||||| |||||||||||||||||| |||||| ||||| || |||  | ||||||||||||||||    
T  16915169 aatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgacttagcaacaacaacatca 16915102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 11580693 - 11580619
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||| ||||||||||||| ||  ||||||| |  |||||||||||| ||||||||||||    
T  11580693 atgattatgataaagactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaa 11580619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 13036970 - 13036896
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||  ||| ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  13036970 atgattatggtgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 13036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 16212071 - 16212145
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  16212071 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 16212145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 17224229 - 17224152
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa-tcatgatatatgaacacccaagccat 134  Q
    ||||||| ||||| |||||||||| | ||||||  ||||||||| |||||| ||||||  |||||| |||||||||||    
T  17224229 aattcaccaattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccat 17224152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 14272168 - 14272060
Alignment:
Q  67 atttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| ||||||||  ||||||||| || | ||||||||  ||||||||| |||||||| |||||| ||||| || ||   | |||||||    
T  14272168 attttacaaaaccaccaccaacaactcatttctcatcatctaatcatgaattatgaacactcaagccatgaatcatcaacaacaatatcatttagcaaca 14272069  T
Q  165 acaacatca 173  Q
    |||||||||    
T  14272068 acaacatca 14272060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 36024452 - 36024523
Alignment:
Q  173 atgattatgaagaacactaaccccc-ttaccttaggttgtgattaat-tcacacttaggcttcactttagctc 243  Q
    |||||||||| ||| |||||||||| ||||||||| || |||||||  ||| |||||||||||||||||||||    
T  36024452 atgattatgatgaagactaaccccccttaccttagattatgattaacctca-acttaggcttcactttagctc 36024523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 271926 - 272034
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| | ||||||||||||||||    
T  271926 accacaaccacaacttatgatcatgcattccatcatatttcaacaactacatgtcttaattcactaatttcacaaaaccaccaacaacaatccatttctc 272025  T
Q  101 aacaacaat 109  Q
     | ||||||    
T  272026 tataacaat 272034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 272330 - 272402
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcct 245  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||    
T  272330 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcct 272402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 172 - 307
Target Start/End: Original strand, 3504 - 3637
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    ||||||||||| ||| | ||||||| ||||||||| |  ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3504 catgattatgaggaagaataacccc-ttaccttagatgatgattaattcaaacttaggcttcactttagctcctaat-cttcaatcttcaagtttccccc 3601  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| |||||||||||| |||||    
T  3602 tttctctaacccttgttcttcctttctcccactttc 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24545 - 24438
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||   ||||||| | ||||||||||||||||    
T  24545 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcttaattcaccaatttctttaaaccaccaacaacaatccatttctc 24446  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  24445 aacaacaa 24438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 20254628 - 20254754
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccc 269  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||| |||||| ||||||||||||||||||    
T  20254628 atcatgattatgaagaacactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcataattcctcaatcttcaagtttccc 20254727  T
Q  270 cctttctttaacccttgttgttcctttc 297  Q
    |||||   ||||||||||| ||||||||    
T  20254728 ccttt-gctaacccttgttcttcctttc 20254754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 21650336 - 21650222
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatca 158  Q
    ||||| |||||||||||||||| | |||||    ||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  21650336 ttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatgtctca 21650237  T
Q  159 gcaacaacaacatca 173  Q
     ||||||||||||||    
T  21650236 acaacaacaacatca 21650222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 17148533 - 17148641
Alignment:
Q  66 aatttcacaaaaccactaccaacaatccatttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||||||||||||||| |||||||    |||||||| ||||||| |||||||||||||||||||||||| |||||||| ||| ||||| | |||||||||    
T  17148533 aatttcacaaaaccaccaccaacatcttatttctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcaaca 17148632  T
Q  165 acaacatca 173  Q
    |||||||||    
T  17148633 acaacatca 17148641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 20893583 - 20893509
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| |||||||||||||||||||||   ||||||| |  |||||||||||| ||||||||||||    
T  20893583 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 20893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 44035267 - 44035219
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  44035267 ttcaccaattgcacaaaaccaccaacaacaatccatttctcaacaacaa 44035219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 20913350 - 20913409
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  20913350 actaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 20913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 13377131 - 13377054
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat 134  Q
    ||||||| |||||||||||||| | | ||||||| ||||||||| |||| ||||||||  |||||| || ||||||||    
T  13377131 aattcaccaatttcacaaaaccgccaacaacaattcatttctcatcaacaaatcatgaattatgaatactcaagccat 13377054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 20177131 - 20177248
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgta 155  Q
    ||||||| |||||||||||||||| | ||||||  ||||||||  |||| ||||||||  |||||| | ||||||||| |||||| | ||| |||||       
T  20177131 aattcaccaatttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcac 20177230  T
Q  156 tcagcaacaacaacatca 173  Q
    | ||||||||||||||||    
T  20177231 ttagcaacaacaacatca 20177248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 4843 - 5014
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    |||||||||||||||||| |||||||||||||||||||||   |||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||    
T  4843 accacaaccacaacttataatcatgcattccatcatattt---caacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatccatttctc 4939  T
Q  101 aacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    | || | ||||||||  |||||||| ||||||||| ||| || | ||| ||||||  | ||||||||||||||||    
T  4940 atcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaacaacaacatca 5014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 172 - 307
Target Start/End: Complemental strand, 34406 - 34271
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccc 271  Q
    |||||||||||  |  |||||||| ||||||||||||  |||| ||||||  |||  ||||||||||||||||||||||| ||||||||||||||| |||    
T  34406 catgattatgataataactaaccctcttaccttaggtaatgatcaattcaagcttgagcttcactttagctcctaattctccaatcttcaagtttctccc 34307  T
Q  272 tttctttaacccttgttgttcctttctccctctttc 307  Q
    ||||| ||||||||||| ||||||||||||||||||    
T  34306 tttctctaacccttgttcttcctttctccctctttc 34271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3418 - 3525
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||| ||||||| | ||||| ||||||||||    
T  3418 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataactcaccaattccactaaaccaccaacaacattccatttctc 3517  T
Q  101 aacaacaa 108  Q
    ||||||||    
T  3518 aacaacaa 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 339 - 412
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||| ||| ||||||||||||||||||| |   ||||||| || |||||||||||| ||||||||||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaa 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 171 - 297
Target Start/End: Original strand, 48502 - 48628
Alignment:
Q  171 tcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa-ttcttcaatcttcaagtttccc 269  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||| | || |||||||||||||||||||| ||||||||||||||||||||||    
T  48502 tcatgattatgaagaagactaacccccttacattaggttatgattaattcaaatttgggcttcactttagctcctaatttcttcaatcttcaagtttccc 48601  T
Q  270 cctttctttaacccttgttgttcctttc 297  Q
    |||||   ||||||||||| ||||||||    
T  48602 ccttt-gctaacccttgttcttcctttc 48628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 253330 - 253237
Alignment:
Q  8 ccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatttcacaaaaccactaccaacaatccatttctca 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||||||||||||||||    
T  253330 ccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatccatttctca 253237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 247398 - 247324
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  247398 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 6127 - 6017
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa-ttcttcaatcttcaagtttccccctttctttaacccttg 286  Q
    |||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  6127 actaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaatttcttcaatcttcaagttttcccctttctctaacccttg 6028  T
Q  287 ttgttcctttc 297  Q
     | ||||||||    
T  6027 ctcttcctttc 6017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 6478 - 6398
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||| ||| ||||| | |||||| |||||||||||    
T  6478 atttctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcatcaacaacatca 6398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 172 - 307
Target Start/End: Original strand, 45337 - 45473
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaat-tcttcaatcttcaagtttcccc 270  Q
    ||||||||||| ||| ||||||||||||||||||| |  || ||||| || |||||||||||| || |||||||||  ||||||||||||||||||||||    
T  45337 catgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggcttcaattaagctcctaagctcttcaatcttcaagtttcccc 45436  T
Q  271 ctttctttaacccttgttgttcctttctccctctttc 307  Q
    |||||| ||||||||||| ||||||||| || |||||    
T  45437 ctttctctaacccttgttcttcctttcttccactttc 45473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 172 - 307
Target Start/End: Original strand, 54723 - 54859
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaat-tcttcaatcttcaagtttcccc 270  Q
    ||||||||||| ||| ||||||| ||||||||||| |  || ||||| || ||||| |||||| || |||||||||  |||||||||||||||||||||     
T  54723 catgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagcttcaattaagctcctaagctcttcaatcttcaagtttccca 54822  T
Q  271 ctttctttaacccttgttgttcctttctccctctttc 307  Q
    |||||| ||||||||||| ||||||||| || |||||    
T  54823 ctttctctaacccttgttcttcctttcttccactttc 54859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 4362 - 4251
Alignment:
Q  189 ctaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattc-ttcaatcttcaagtttccccctttctttaacccttgt 287  Q
    ||||||||||||||||||||  |||||||| || ||||  ||||||||||||||||||| || |||||||||||||||| ||||||||| ||||||||||    
T  4362 ctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaaatccttcaatcttcaagtttacccctttctctaacccttgt 4263  T
Q  288 tgttcctttctc 299  Q
    | ||||||||||    
T  4262 tcttcctttctc 4251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 61154 - 61030
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttcaagtttccccct 272  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||| ||||  |||| |||||||||| ||||||| |||||||||||||| ||||     
T  61154 atgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagcttaactttagctcataattctccaatcttcaagttttccccc 61055  T
Q  273 ttctttaacccttgttgttcctttc 297  Q
    ||   ||||||||||| ||||||||    
T  61054 tttgctaacccttgttcttcctttc 61030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 48903 - 48977
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || |||||||||||||||||||||  || | |||  | |||||||||| ||||||||||||||    
T  48903 atgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggctttactttagctcctaa 48977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 12054 - 11942
Alignment:
Q  3 cacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaattt-cacaaaaccactaccaacaatccatttctca 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| ||| ||| |  ||||   |||||||||    
T  12054 cacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaattttcaccaaaacaccaaaaacatctcatttctca 11955  T
Q  102 acaacaatcatga 114  Q
    ||| |||||||||    
T  11954 acaccaatcatga 11942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22254 - 22186
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcacaaatt 69  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  22254 accacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatt 22186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 167 - 227
Alignment:
Q  3 cacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  167 cacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattca 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 1695 - 1635
Alignment:
Q  3 cacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  1695 cacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattca 1635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1077 - 1017
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaatt 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  1077 accacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataatt 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 6631 - 6713
Alignment:
Q  72 acaaaaccactaccaacaatccatttctcaacaacaa-tcatgatatatgaacacccaagccat-aatcataaacaaaaacat 152  Q
    |||||||||| | ||||||  ||||||||| |||||| ||||||  ||||| |||||||||||| |||||| |||||||||||    
T  6631 acaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaaaacat 6713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 11739 - 11818
Alignment:
Q  94 atttctcaacaacaatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaacaacaacatca 173  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  11739 atttctcaccaacaatcatgatatatgaacacccaagccataaatcat-aacaacaacatgtctcagcaacaacaacatca 11818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 8126 - 8051
Alignment:
Q  172 catgattatgaagaacactaaccccc-ttaccttaggttgtgattaattcacacttaggcttcactttagctccta 246  Q
    ||||||||||| ||| |||||||||| ||||||||| |  |||||||| || |||||||||||| |||||||||||    
T  8126 catgattatgatgaagactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 12062 - 12137
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||| ||| ||||||||||||| ||||| |  |||||||| || |||| ||||||| ||||||||||||    
T  12062 catgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaa 12137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 26375 - 26298
Alignment:
Q  170 atcatgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||||||  || ||||||||||||||||||| |   ||||||| |   ||||||||||| ||||||||||||    
T  26375 atcatgattatgataaagactaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaa 26298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45864 - 45804
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaatt 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  45864 accacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataatt 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 130521 - 130629
Alignment:
Q  67 atttcacaaaaccactaccaacaatccattt-ctcaacaacaatcatgatatatgaacacccaagccataa-tcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| | ||| |||||    
T  130521 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataatcaacaacatatctcaacaaca 130620  T
Q  165 acaacatca 173  Q
    |||||||||    
T  130621 acaacatca 130629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 12061 - 11954
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccctttctttaacccttg 286  Q
    ||||||||||||||||||| |  || ||||||   ||||||||||||||||||||||||||| |||||||||||||||||||| ||| || ||| |||||    
T  12061 actaacccccttaccttagatgatgtttaattttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttccctcttcctctaa-ccttg 11963  T
Q  287 ttgttcctt 295  Q
    || ||||||    
T  11962 ttcttcctt 11954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 297
Target Start/End: Original strand, 108068 - 108177
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattcttcaatcttc-aagtttccccctttctttaacccttg 286  Q
    |||||||||||||||||||| | | || |||||| ||||  ||||||||||||||||||||||| |||||||| || |||||||||||   |||||||||    
T  108068 actaacccccttaccttaggctataatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaaaatttcccccttt-gctaacccttg 108166  T
Q  287 ttgttcctttc 297  Q
    || ||||||||    
T  108167 ttcttcctttc 108177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 54182 - 54303
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  54182 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactatagctcctaattgcttcaatcttcaagtttctccct 54281  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | |||||| ||||||| ||||||    
T  54282 tcctttaa-ccttgttcttcctt 54303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 116804 - 116686
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat-aatcataaacaaaaacatgta 155  Q
    ||||||| ||||| |||||||||| | ||||||||||||| ||| |||| ||||||||  |||||||||||||||||| |||||| ||||| || ||       
T  116804 aattcaccaattttacaaaaccaccaacaacaatccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcac 116705  T
Q  156 tcagcaacaacaacatcat 174  Q
    | |||||||||||||||||    
T  116704 ttagcaacaacaacatcat 116686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 162476 - 162428
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  162476 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 162428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 166554 - 166506
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||| ||||||||||    
T  166554 ttcaccaatttcacaaaaccaccaacaacaatccatttttcaacaacaa 166506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 9282 - 9201
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttcc 268  Q
    ||||||||||||||||||| |  || |||||    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9282 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttcc 9201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 16180 - 16099
Alignment:
Q  188 actaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaatt-cttcaatcttcaagtttcc 268  Q
    ||||||||||||||||||| |  || |||||    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  16180 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttcc 16099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 4035 - 3975
Alignment:
Q  3 cacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattca 63  Q
    |||||||||||||||| || ||||||||||||| | ||||| |||||||||||||||||||    
T  4035 cacaaccacaacttataattatgcattccatcacaattcaataacaacatgtcgtaattca 3975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 13823 - 13890
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcacttta 239  Q
    ||||||||||| ||| ||||||||||||||||||| |  |||||||| || |||||||||||||||||    
T  13823 catgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 12418 - 12492
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| | | ||||||| |  |||||||||||||||||||||||||    
T  12418 atgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaa 12492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 7517 - 7638
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaattctt-caatcttcaagtttccccct 272  Q
    ||||||||| ||| || |||||||||||||||| |  || |||||    ||| | ||||||||||||||||||||| || ||||||||||||||||||||    
T  7517 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaactaaagcttcactttagctcctaattgtttcaatcttcaagtttccccct 7616  T
Q  273 ttctttaacccttgttgttcctt 295  Q
    | || ||| ||||||| ||||||    
T  7617 tcctctaa-ccttgttcttcctt 7638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 3775 - 3847
Alignment:
Q  223 acttaggcttcactttagctcctaatt-cttcaatcttcaagtttccccctttctttaacccttgttgttcctt 295  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||| || ||| ||||||| ||||||    
T  3775 acttaggcttcactttagctcctaattgcttcattcttcaagtttctcccttcctctaa-ccttgttcttcctt 3847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 6380 - 6332
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  6380 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 6332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 31577 - 31529
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  31577 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 31529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 41267 - 41315
Alignment:
Q  60 ttcacaaatttcacaaaaccactaccaacaatccatttctcaacaacaa 108  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  41267 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 41315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 10289 - 10218
Alignment:
Q  172 catgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctc 243  Q
    ||||||||||||||| || |||||||||||||||| |  |||||||  |  |||||||||||||||||||||    
T  10289 catgattatgaagaagacaaacccccttaccttagatgatgattaaccccaacttaggcttcactttagctc 10218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 9183 - 9257
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  9183 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 3540 - 3466
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  3540 atgattatgacaaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 1430 - 1504
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcaca-cttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |||| ||||||||||||||||||||||||    
T  1430 atgattatgataaagactaacccccttaccttagataaagattaat-cacaacttaggcttcactttagctcctaa 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 13317 - 13243
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 13243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 123119 - 123045
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    |||||||||  ||| |||||||||||||||||||||   ||||||| |  |||||||||||| ||||||||||||    
T  123119 atgattatggtgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 123045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 25532 - 25605
Alignment:
Q  174 tgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||| ||| ||||||||||||||||||| |   ||||||  || |||||||||||| ||||||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 25605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 44306 - 44249
Alignment:
Q  5 caaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattc 62  Q
    |||||||||||| | ||||||||| |||||| | ||||||||||||||||| ||||||    
T  44306 caaccacaacttgtaatcatgcatcccatcacaattcaacaacaacatgtcataattc 44249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 77138 - 77061
Alignment:
Q  58 aattcacaaatttcacaaaaccactaccaacaatccatttctcaacaac-aatcatgatatatgaacacccaagccat 134  Q
    ||||||| |||||||||||||||| | ||||||  ||||||||| |||| ||||||||  |||||| |||||||||||    
T  77138 aattcaccaatttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccat 77061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 28501 - 28609
Alignment:
Q  67 atttcacaaaaccactaccaacaatccatttctcaacaacaa-tcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||| | ||||||  ||||||||| ||| || ||||||  |||||||||||||||||| |||||| ||||| |||||   | |||||||    
T  28501 attttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttagcaaca 28600  T
Q  165 acaacatca 173  Q
    |||||||||    
T  28601 acaacatca 28609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 9160 - 9234
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaat-tcacacttaggcttcactttagctcctaa 247  Q
    |||||||||| ||| |||||| | |||||||||| || |||||||  ||| |||||||||||||||||||||||||    
T  9160 atgattatgatgaagactaacacacttaccttagattatgattaacctca-acttaggcttcactttagctcctaa 9234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 146906 - 146980
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  146906 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 146980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 910 - 836
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  910 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 9914 - 9840
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||| ||||||||||||    
T  9914 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 9840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 17336 - 17262
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || |||||||| |||||||||| | | ||||||| |  |||||||||||| ||||||||||||    
T  17336 atgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaa 17262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 57424 - 57350
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||| |   ||||||| |  |||||||||||||||||||| ||||    
T  57424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaa 57350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5942 - 5996
Alignment:
Q  1 accacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtc 55  Q
    |||||||||||||||||  ||||||||||| |||| | |||||| ||||||||||    
T  5942 accacaaccacaacttacaatcatgcattcgatcacaattcaactacaacatgtc 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 193429 - 193355
Alignment:
Q  173 atgattatgaagaacactaacccccttaccttaggttgtgattaattcacacttaggcttcactttagctcctaa 247  Q
    ||||||||||  || ||||||||||||||||||  |   ||||||| |  |||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaa 193355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 44080 - 43972
Alignment:
Q  67 atttcacaaaaccactaccaacaatccatttctcaacaacaa-tcatgatatatgaacacccaagccat-aatcataaacaaaaacatgtatcagcaaca 164  Q
    |||| |||||||||  | ||||||  ||||||||| || ||| ||||||| |||||||||||||||||| |||||| ||||| || ||   | |||||||    
T  44080 attttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 43981  T
Q  165 acaacatca 173  Q
    |||||||||    
T  43980 acaacatca 43972  T

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