View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1412_high_109 (Length: 212)
Name: NF1412_high_109
Description: NF1412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1412_high_109 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 42114160 - 42113981
Alignment:
| Q |
15 |
agcacagaaaaaagcacagaaaaacaccaccaatgaaacgacgccgtaaatatcatcttcaggactccatagaacggtgaaggccaacgatacaacctga |
114 |
Q |
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| T |
42114160 |
agcacagaaaaaagcacagaaaaacaccaccaatgaaacgacgccgtaaatatcatcttcaggactccatagaacggtgaaggccaacgacacaacctga |
42114061 |
T |
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| Q |
115 |
agaggaagagccaccaaaacgacagaacccaatgcgtagattcgaatccttaatcctttgttaatcaccaatgataaaac |
194 |
Q |
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| T |
42114060 |
agaggaagagccaccaaaacgacagaacccaatgcgtagattcgaatccttaatcctttgttaatcaccaatgataaaac |
42113981 |
T |
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