View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1412_high_77 (Length: 244)

Name: NF1412_high_77
Description: NF1412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1412_high_77
NF1412_high_77
[»] scaffold0558 (4 HSPs)
scaffold0558 (11-194)||(10777-10955)
scaffold0558 (138-209)||(10441-10512)
scaffold0558 (138-209)||(10064-10135)
scaffold0558 (138-209)||(10645-10716)
[»] scaffold0104 (5 HSPs)
scaffold0104 (11-194)||(38988-39166)
scaffold0104 (138-209)||(39474-39545)
scaffold0104 (138-209)||(39245-39316)
scaffold0104 (138-209)||(39851-39922)
scaffold0104 (126-220)||(38869-38963)
[»] chr5 (15 HSPs)
chr5 (114-229)||(25192258-25192373)
chr5 (130-229)||(33868958-33869057)
chr5 (130-229)||(7183316-7183415)
chr5 (130-229)||(39056240-39056339)
chr5 (138-209)||(7183198-7183269)
chr5 (138-210)||(33868839-33868911)
chr5 (138-209)||(39056386-39056457)
chr5 (138-195)||(15913065-15913122)
chr5 (122-193)||(30407665-30407736)
chr5 (122-193)||(30407866-30407937)
chr5 (122-193)||(30408068-30408139)
chr5 (122-193)||(30408673-30408744)
chr5 (122-193)||(30408873-30408944)
chr5 (130-229)||(15912923-15913018)
chr5 (122-193)||(30408270-30408341)
[»] chr8 (14 HSPs)
chr8 (115-229)||(17225611-17225725)
chr8 (122-229)||(17057572-17057679)
chr8 (122-229)||(17590546-17590653)
chr8 (138-209)||(17225389-17225460)
chr8 (138-209)||(40005577-40005648)
chr8 (138-209)||(40005778-40005849)
chr8 (143-209)||(40005979-40006045)
chr8 (143-193)||(40006167-40006217)
chr8 (122-186)||(17057370-17057434)
chr8 (122-186)||(17590791-17590855)
chr8 (143-229)||(17225789-17225875)
chr8 (143-193)||(40006124-40006174)
chr8 (154-193)||(40006210-40006249)
chr8 (138-209)||(44508986-44509057)
[»] scaffold0455 (5 HSPs)
scaffold0455 (114-229)||(1575-1690)
scaffold0455 (122-229)||(1774-1881)
scaffold0455 (114-229)||(1376-1491)
scaffold0455 (138-209)||(1156-1227)
scaffold0455 (144-209)||(1025-1090)
[»] chr6 (15 HSPs)
chr6 (114-229)||(28123290-28123405)
chr6 (122-229)||(28123489-28123596)
chr6 (113-229)||(22038080-22038196)
chr6 (130-229)||(7851515-7851614)
chr6 (138-209)||(18762778-18762849)
chr6 (138-209)||(28123070-28123141)
chr6 (144-209)||(28122939-28123004)
chr6 (122-193)||(15034025-15034096)
chr6 (138-229)||(18762640-18762731)
chr6 (122-227)||(22038460-22038565)
chr6 (122-193)||(22038290-22038361)
chr6 (138-209)||(7851400-7851471)
chr6 (126-171)||(18762410-18762455)
chr6 (138-190)||(18762531-18762583)
chr6 (133-229)||(32556524-32556620)
[»] scaffold0144 (15 HSPs)
scaffold0144 (122-229)||(28613-28720)
scaffold0144 (122-229)||(19669-19776)
scaffold0144 (122-193)||(28819-28890)
scaffold0144 (122-197)||(30961-31036)
scaffold0144 (122-229)||(33375-33482)
scaffold0144 (122-229)||(33885-33992)
scaffold0144 (122-229)||(34055-34162)
scaffold0144 (122-186)||(19372-19436)
scaffold0144 (122-186)||(34565-34629)
scaffold0144 (122-229)||(19499-19606)
scaffold0144 (122-229)||(33545-33652)
scaffold0144 (122-229)||(33715-33822)
scaffold0144 (122-229)||(34225-34332)
scaffold0144 (122-229)||(34395-34502)
scaffold0144 (147-229)||(19839-19921)
[»] chr7 (17 HSPs)
chr7 (130-229)||(45402658-45402757)
chr7 (122-229)||(13420611-13420718)
chr7 (130-229)||(6797174-6797272)
chr7 (138-194)||(12283415-12283471)
chr7 (122-193)||(4721001-4721072)
chr7 (126-193)||(10564670-10564737)
chr7 (138-209)||(12283088-12283159)
chr7 (138-209)||(12283291-12283362)
chr7 (122-229)||(13420410-13420517)
chr7 (138-194)||(12283524-12283580)
chr7 (138-209)||(10564162-10564233)
chr7 (138-208)||(6797319-6797389)
chr7 (141-193)||(10564479-10564531)
chr7 (138-194)||(10563851-10563907)
chr7 (142-194)||(10564286-10564338)
chr7 (141-193)||(10564574-10564626)
chr7 (126-162)||(12283668-12283704)
[»] chr4 (23 HSPs)
chr4 (130-229)||(2847898-2847997)
chr4 (122-229)||(809638-809745)
chr4 (122-193)||(809839-809910)
chr4 (122-209)||(810210-810297)
chr4 (138-229)||(9561060-9561151)
chr4 (130-229)||(20588032-20588131)
chr4 (138-209)||(55780307-55780378)
chr4 (138-209)||(55844487-55844558)
chr4 (122-226)||(810009-810113)
chr4 (122-229)||(808726-808833)
chr4 (122-193)||(808927-808998)
chr4 (122-229)||(809097-809204)
chr4 (122-229)||(809298-809405)
chr4 (122-193)||(809468-809539)
chr4 (138-208)||(9561583-9561653)
chr4 (122-193)||(54754342-54754413)
chr4 (138-209)||(34986303-34986374)
chr4 (122-193)||(54757712-54757783)
chr4 (138-209)||(9561198-9561269)
chr4 (122-193)||(54756707-54756778)
chr4 (122-193)||(54756908-54756979)
chr4 (122-193)||(54757511-54757582)
chr4 (122-193)||(54757109-54757180)
[»] chr2 (20 HSPs)
chr2 (122-229)||(21173650-21173757)
chr2 (122-229)||(27970518-27970625)
chr2 (138-206)||(28048256-28048324)
chr2 (113-229)||(44348231-44348347)
chr2 (127-228)||(28056180-28056281)
chr2 (122-193)||(27970183-27970254)
chr2 (122-193)||(28056688-28056759)
chr2 (122-193)||(21173480-21173551)
chr2 (122-193)||(27970353-27970424)
chr2 (122-193)||(28056858-28056929)
chr2 (122-229)||(44348611-44348718)
chr2 (122-193)||(44350764-44350835)
chr2 (138-209)||(30771412-30771483)
chr2 (122-193)||(44348441-44348512)
chr2 (122-191)||(27970726-27970795)
chr2 (138-209)||(24024558-24024629)
chr2 (141-194)||(30771316-30771369)
chr2 (145-193)||(30767566-30767614)
chr2 (145-193)||(30771729-30771777)
chr2 (155-229)||(28057023-28057097)
[»] chr1 (12 HSPs)
chr1 (122-229)||(37223561-37223668)
chr1 (122-229)||(37223901-37224008)
chr1 (138-209)||(19845821-19845892)
chr1 (122-186)||(37223434-37223498)
chr1 (130-229)||(13590646-13590745)
chr1 (122-229)||(37223731-37223838)
chr1 (131-229)||(37224071-37224169)
chr1 (140-229)||(19846041-19846130)
chr1 (138-210)||(5077382-5077454)
chr1 (131-229)||(20481272-20481370)
chr1 (122-191)||(37223259-37223328)
chr1 (137-229)||(20372376-20372468)
[»] chr3 (11 HSPs)
chr3 (131-229)||(32233170-32233268)
chr3 (122-193)||(11974924-11974995)
chr3 (114-193)||(11975094-11975173)
chr3 (138-209)||(40219301-40219372)
chr3 (138-209)||(40219502-40219573)
chr3 (138-209)||(40219703-40219774)
chr3 (138-209)||(40219904-40219975)
chr3 (122-193)||(11975264-11975335)
chr3 (122-193)||(11975434-11975505)
chr3 (138-209)||(32233052-32233123)
chr3 (138-193)||(41568902-41568957)
[»] scaffold0534 (2 HSPs)
scaffold0534 (114-186)||(5927-5999)
scaffold0534 (122-229)||(8846-8953)
[»] scaffold0065 (5 HSPs)
scaffold0065 (138-209)||(30-101)
scaffold0065 (130-194)||(810-873)
scaffold0065 (138-229)||(536-626)
scaffold0065 (138-209)||(418-489)
scaffold0065 (138-229)||(666-757)
[»] scaffold0023 (3 HSPs)
scaffold0023 (122-193)||(126238-126309)
scaffold0023 (122-193)||(126408-126479)
scaffold0023 (122-193)||(128561-128632)
[»] scaffold0012 (2 HSPs)
scaffold0012 (130-229)||(119381-119480)
scaffold0012 (138-209)||(119263-119334)
[»] scaffold0019 (3 HSPs)
scaffold0019 (138-209)||(168329-168400)
scaffold0019 (138-209)||(168523-168594)
scaffold0019 (140-194)||(168673-168727)
[»] scaffold0460 (2 HSPs)
scaffold0460 (131-229)||(1783-1881)
scaffold0460 (138-209)||(1665-1736)
[»] scaffold0050 (5 HSPs)
scaffold0050 (138-210)||(22799-22871)
scaffold0050 (138-195)||(16121-16178)
scaffold0050 (138-194)||(22603-22659)
scaffold0050 (138-209)||(16230-16301)
scaffold0050 (138-194)||(16512-16568)
[»] scaffold0006 (2 HSPs)
scaffold0006 (130-229)||(209505-209604)
scaffold0006 (138-208)||(209388-209458)
[»] scaffold0069 (2 HSPs)
scaffold0069 (137-229)||(51538-51630)
scaffold0069 (138-209)||(51420-51491)
[»] scaffold0717 (1 HSPs)
scaffold0717 (130-229)||(7130-7229)
[»] scaffold0002 (2 HSPs)
scaffold0002 (130-229)||(450380-450479)
scaffold0002 (146-209)||(450263-450326)
[»] scaffold0553 (1 HSPs)
scaffold0553 (138-190)||(6397-6449)
[»] scaffold0581 (2 HSPs)
scaffold0581 (122-193)||(95-166)
scaffold0581 (122-173)||(314-365)


Alignment Details
Target: scaffold0558 (Bit Score: 104; Significance: 6e-52; HSPs: 4)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 10955 - 10777
Alignment:
Q  11 atggttatgtatgtgttaaatttaatcaaacaatttatcttttagaaaagcaaaacataatcagttggttgtgtctttttatatgtttcatagtataatg 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10955 atggttatgtatgcgttaaatttaatcaaacaatttatcttttagaaaaacaaaacataatcagttggttgtgtctttttatatgtttcatagtataatg 10856  T
Q  111 ttcattttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||   ||| |     |   | ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||    
T  10855 ttcattttatcttaatca-----aacaaatactgaaaccataagtatggtttaatggttttgatagtgttgtatgtaaaaccaa 10777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 10512 - 10441
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||    
T  10512 attactgaaaccataagtatggtttaatggttttggtagtgttctatgtgaaaccaaactaattgtctaatg 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 10135 - 10064
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||    
T  10135 attattgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaacttattgtctaatg 10064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 10716 - 10645
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||||||| |||||||| |||||| ||| ||| ||||||||||||| ||| | |||||||    
T  10716 attactgaaaccatacgtatagtttaatggttttgatagttttcaatgtgaaaccaaaataattttctaatg 10645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 100; Significance: 1e-49; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 38988 - 39166
Alignment:
Q  11 atggttatgtatgtgttaaatttaatcaaacaatttatcttttagaaaagcaaaacataatcagttggttgtgtctttttatatgtttcatagtataatg 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  38988 atggttatgtatgtgtgaaatttaatcaaacaatttatcttttagaaaaacaaaacataatcagttggttgtgcctttttatatgtttcacagtataatg 39087  T
Q  111 ttcattttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||   ||| |     |   | ||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||    
T  39088 ttcattttatcttaatca-----aacaaatactgaaaccataagtatggtttaatgattttgatagtgttgtatgtaaaaccaa 39166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 39474 - 39545
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  39474 attactgaaaccataagtatggtttaatagttttgatagtgttctatgtgaaaccaaactaattgtctaatg 39545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 39245 - 39316
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||||||||||||||||| |||||| | | ||| ||||||||||||| ||| |||||||||    
T  39245 attactgaaaccatacgtatggtttaatggttttgataattttcaatgtgaaaccaaaataattgtctaatg 39316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 39851 - 39922
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||    ||||||||||| ||||||   ||||||||||||||||||||||| |||||||||    
T  39851 attactgaaaccatcaacatggtttaatggttttgattatgttctatgtgaaaccaaactaattgtctaatg 39922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 38869 - 38963
Alignment:
Q  126 ttaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatga 220  Q
    ||||||||||| | |||||||||| |  ||| ||||||||| |||||| ||||||||||||||||| |||  || || ||||||  |||||||||    
T  38869 ttaggggtatgaaatactgaaaccgtgagtaaggtttaatggttttgatagtgttctatgtgaaacaaaaagaattgcctaatggttttaaatga 38963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 25192258 - 25192373
Alignment:
Q  114 attttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatt 213  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||  |||  || |||||  ||    
T  25192258 attttattaaaattaggggtatggaatactgaaaccatacgtatggtttaatggttttgaaagtgttctatgtaaaaccaagataagggtgtaatggttt 25192357  T
Q  214 taaatgaaattattat 229  Q
    ||||||||||||||||    
T  25192358 taaatgaaattattat 25192373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 33869057 - 33868958
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||| | ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||| ||| ||||||||||||||    
T  33869057 gggtatggattactgaaaccaaaagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttttaatgaaattattat 33868958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 7183415 - 7183316
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||| |||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  7183415 gggtgtggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 7183316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 39056240 - 39056339
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| |||||||| |||||    
T  39056240 gggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaatgattat 39056339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 7183269 - 7183198
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||||| ||| |||||||||    
T  7183269 attactgaaaccataattatggtttaatgattttgatagtcttctatgagaaaccaaaataattgtctaatg 7183198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 33868911 - 33868839
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatga 210  Q
    |||||||||||||||  |||||||||||| |||||| ||| ||||||| ||||||||| ||| ||||||||||    
T  33868911 attactgaaaccataattatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatga 33868839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 39056386 - 39056457
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| ||| ||||||| ||||||||| ||| |||||||||    
T  39056386 attactgaaaccataattatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatg 39056457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 15913065 - 15913122
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaa 195  Q
    |||||||||||||||  ||||||||||||||||||| ||| ||||||| |||||||||    
T  15913065 attactgaaaccataattatggtttaatgattttgatagtcttctatgagaaaccaaa 15913122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 30407665 - 30407736
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  30407665 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 30407736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 30407866 - 30407937
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  30407866 aaaattaggagtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 30407937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 30408068 - 30408139
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  30408068 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 30408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 30408673 - 30408744
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  30408673 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 30408744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 30408873 - 30408944
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  30408873 aaaattaggagtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 30408944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 15912923 - 15913018
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||| |||||||||||||||    ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  15912923 gggtgtggattactgaaacc----gtatggtttaatggttttgatagtcttgtatgtgaaaccaatataattgtgtaatggtttttaatgaaattattat 15913018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 30408270 - 30408341
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||| | ||||| |||||| ||||| ||| || ||||||    
T  30408270 aaaattaggtgtatggaatactgaaaccataagtatgctataatggttttgatagtgtactaggtaaaacca 30408341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 17225725 - 17225611
Alignment:
Q  115 ttttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaattt 214  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||  |||  || |||||  |||    
T  17225725 ttttattaaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccaagttaagggtgtaatggtttt 17225626  T
Q  215 aaatgaaattattat 229  Q
    || ||||||||||||    
T  17225625 aagtgaaattattat 17225611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 17057572 - 17057679
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||| ||| |  || |||||  ||||| ||||    
T  17057572 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttaagtgaa 17057671  T
Q  222 attattat 229  Q
    ||||||||    
T  17057672 attattat 17057679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 17590653 - 17590546
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||| ||| |  || |||||  ||||| ||||    
T  17590653 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttaagtgaa 17590554  T
Q  222 attattat 229  Q
    ||||||||    
T  17590553 attattat 17590546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 17225460 - 17225389
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  17225460 attacagaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctaatg 17225389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 40005648 - 40005577
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  40005648 attactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatg 40005577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 40005849 - 40005778
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||| ||||| |||||| | |||||||||||||||||||||||  ||||||||    
T  40005849 attactgaaaccataagtatggtctaatggttttgatactgttctatgtgaaaccaaactaatggtctaatg 40005778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 40006045 - 40005979
Alignment:
Q  143 tgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  40006045 tgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatg 40005979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 40006217 - 40006167
Alignment:
Q  143 tgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  40006217 tgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaacca 40006167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 17057370 - 17057434
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgt 186  Q
    |||| |||||||||||| ||||||||||||| |||||||| |||| |||||| |||||| |||||    
T  17057370 aaaactaggggtatggaatactgaaaccataagtatggttgaatggttttgatagtgttttatgt 17057434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 17590855 - 17590791
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgt 186  Q
    |||| |||||||||||| ||||||||||||| |||||||| |||| |||||| |||||| |||||    
T  17590855 aaaactaggggtatggaatactgaaaccataagtatggttgaatggttttgatagtgttttatgt 17590791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 17225875 - 17225789
Alignment:
Q  143 tgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||| ||||||||||||| |||| | |||||||||||| |||||||  |||  || |||||  ||||| ||||||||||||    
T  17225875 tgaaaccataagtatggtttaatggttttaatagtgttctatgtaaaaccaagttaagggtgtaatggttttaagtgaaattattat 17225789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 40006174 - 40006124
Alignment:
Q  143 tgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||||| ||||||| ||||| |||||| |||||||||||||||||||    
T  40006174 tgaaaccataagtatggtgtaatggttttgatagtgttctatgtgaaacca 40006124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 40006249 - 40006210
Alignment:
Q  154 gtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  40006249 gtatggtctaatgattttgatagtgttctatgtgaaacca 40006210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 44508986 - 44509057
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||| ||||||||||  |||||||||||| |||||| ||| ||||||| |||| |||| ||| |||||||||    
T  44508986 attattgaaaccataattatggtttaatggttttgatagtcttctatgagaaatcaaaataattgtctaatg 44509057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 1690 - 1575
Alignment:
Q  114 attttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatt 213  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| |||||||||||| |||||||  |||  || |||||  ||    
T  1690 attttattaaaattaggggtatggaatactaaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataagggtgtaatggttt 1591  T
Q  214 taaatgaaattattat 229  Q
    ||||||||||||||||    
T  1590 taaatgaaattattat 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 1881 - 1774
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||| |||||| |||||||||||| |||||||  |||  || |||||  ||||||||||    
T  1881 aaaattaggggtatggaatactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataagggtgtaatggttttaaatgaa 1782  T
Q  222 attattat 229  Q
    ||||||||    
T  1781 attattat 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 1491 - 1376
Alignment:
Q  114 attttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatt 213  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||  ||||| |||||| ||||||| |||| |||||||  |||  || |||||  ||    
T  1491 attttattaaaattaggggtatggaatactgaaaccataagtatgggataatggttttgatagtgttcgatgtaaaaccaatataagggtgtaatggttt 1392  T
Q  214 taaatgaaattattat 229  Q
    |||||| |||||||||    
T  1391 taaatggaattattat 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 1227 - 1156
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||| ||||    
T  1227 attacagaaaccatatgtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcaaatg 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 1090 - 1025
Alignment:
Q  144 gaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||    
T  1090 gaaaccatatgtatggtttaatggttttgacggtgttctatatgaaaccaaactaattgtctaatg 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 28123405 - 28123290
Alignment:
Q  114 attttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatt 213  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||| ||||||| |||| |||||||  |||  || |||||  ||    
T  28123405 attttattaaaattaggggtatggaatactgaaaccataagtatggtataatggttttgatagtgttcgatgtaaaaccaatataagggtgtaatggttt 28123306  T
Q  214 taaatgaaattattat 229  Q
    ||||||||||||||||    
T  28123305 taaatgaaattattat 28123290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 28123596 - 28123489
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||| |||||| |||||||||||| |||||||  |||  || |||||  ||||||||||    
T  28123596 aaaattaggggtatggaatactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaaccaatataagggtgtaatggttttaaatgaa 28123497  T
Q  222 attattat 229  Q
    ||||||||    
T  28123496 attattat 28123489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 22038080 - 22038196
Alignment:
Q  113 cattttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaat 212  Q
    ||||| || ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |    
T  22038080 catttgatcaaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttttatgtaaaaccatacttatggtgtaatggtt 22038179  T
Q  213 ttaaatgaaattattat 229  Q
    ||| |||||||||||||    
T  22038180 ttagatgaaattattat 22038196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 7851614 - 7851515
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||| |||||||||||| || ||||||||||||||||| ||| || ||||| |||||||  ||| ||| |||||| ||| ||||||||||||||    
T  7851614 gggtatggataactgaaaccataagtgtggtttaatgattttgatagtcttgtatgtaaaaccaagataattgtgtaatgatttttaatgaaattattat 7851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 18762778 - 18762849
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||| ||| |||||||||    
T  18762778 attactgaaaccataagtatggtttaatggttttgacagtcttcaatgtgaaaccaaaataattgtctaatg 18762849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 28123141 - 28123070
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||| ||||    
T  28123141 attacagaaaccatatgtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcaaatg 28123070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 28123004 - 28122939
Alignment:
Q  144 gaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||    
T  28123004 gaaaccatatgtatggtttaatggttttgacggtgttctatatgaaaccaaactaattgtctaatg 28122939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 15034096 - 15034025
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| |||||||||||| ||||||    
T  15034096 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaacca 15034025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 18762640 - 18762731
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||| |||||| ||| |||||||||||||||||||| ||| |||  || ||||||||| ||| |||||||||  ||||||||||||||||||    
T  18762640 attaatgaaacaataagtatggtttaatgattttgatagtcttcattgagaaaccaaaataattgtctaatggttttaaatgaaattattat 18762731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 22038460 - 22038565
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| |||| ||| |||| ||||||||||||| |||| | |||||||||||| |||||| ||| |  || |||||  |||| |||||    
T  22038460 aaaattaggggtatggaatactaaaatcataagtatggtttaatggttttaatagtgttctatgtaaaaccatacttatggtgtaatggttttagatgaa 22038559  T
Q  222 attatt 227  Q
    ||||||    
T  22038560 attatt 22038565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 22038290 - 22038361
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| || | |||||||| ||||||||||||| |||||| |||||| ||||| ||||||    
T  22038290 aaaattaggggtatggaatattaaaaccataagtatggtttaatggttttgatagtgttatatgtaaaacca 22038361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 7851471 - 7851400
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| ||| ||||||| ||||||||| ||| | |||||||    
T  7851471 attactgaaaccataattatggtttaatggttttgatagtcttctatgagaaaccaaaataattttctaatg 7851400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 18762410 - 18762455
Alignment:
Q  126 ttaggggtatggattactgaaaccatacgtatggtttaatgatttt 171  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  18762410 ttaggggtatggattactgaaacaataagtatggtttaatggtttt 18762455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 18762531 - 18762583
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaa 190  Q
    ||||||||||||||| ||||||||||||| |||||| ||| || |||||||||    
T  18762531 attactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaa 18762583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 32556620 - 32556524
Alignment:
Q  133 tatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatga-atttaaatgaaattattat 229  Q
    ||||||||| ||||||||||  |||||||||||| |||||| ||| ||  ||||||||||||  ||| ||| ||||||  ||| ||||||||||||||    
T  32556620 tatggatta-tgaaaccataaatatggtttaatggttttgatagtcttgcatgtgaaaccaagataattgtgtaatgattttttaatgaaattattat 32556524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 56; Significance: 3e-23; HSPs: 15)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 28720 - 28613
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| ||||| |||||| ||| |  || |||||| |||| |||||    
T  28720 aaaattaggggtatggaatactgaaaccataagtatggtttaatgattttgatagtgttatatgtaaaaccatacttatggtgtaatgattttagatgaa 28621  T
Q  222 attattat 229  Q
     |||||||    
T  28620 tttattat 28613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 19776 - 19669
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  19776 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 19677  T
Q  222 attattat 229  Q
    ||||||||    
T  19676 attattat 19669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 28890 - 28819
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||||    
T  28890 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaacca 28819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 31036 - 30961
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaact 197  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||||||||    
T  31036 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccaaact 30961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 33375 - 33482
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  33375 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 33474  T
Q  222 attattat 229  Q
    ||||||||    
T  33475 attattat 33482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 33885 - 33992
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  ||||||| ||    
T  33885 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttaaataaa 33984  T
Q  222 attattat 229  Q
    ||||||||    
T  33985 attattat 33992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 34055 - 34162
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||| | |||||| ||| |  || |||||  ||||||||||    
T  34055 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatttaaaaccatacttatggtgtaatggttttaaatgaa 34154  T
Q  222 attattat 229  Q
    ||||||||    
T  34155 attattat 34162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 19436 - 19372
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgt 186  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  19436 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgacagtgttatatgt 19372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 34565 - 34629
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgt 186  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  34565 aaaattaggtgtatggaatactgaaaccataagtatggtttaatggttttgacagtgttatatgt 34629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 19606 - 19499
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  19606 aaaattaggtgtatggaatactgaaaccataagtatgatttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 19507  T
Q  222 attattat 229  Q
    ||||||||    
T  19506 attattat 19499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 33545 - 33652
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  33545 aaaattaggtgtatggaatactgaaaccataagtatgatttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 33644  T
Q  222 attattat 229  Q
    ||||||||    
T  33645 attattat 33652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 33715 - 33822
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  33715 aaaattaggtgtatggaatactgaaaccatatgtatgatttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 33814  T
Q  222 attattat 229  Q
    ||||||||    
T  33815 attattat 33822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 34225 - 34332
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||| | ||||||||||||| || |||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  34225 aaaattaggtgtatgcaatactgaaaccataagtgtggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 34324  T
Q  222 attattat 229  Q
    ||||||||    
T  34325 attattat 34332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 34395 - 34502
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||| ||||| | || |||||||||| ||||| ||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  34395 aaaattaggtgtatgaaataatgaaaccataagtatgatttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 34494  T
Q  222 attattat 229  Q
    ||||||||    
T  34495 attattat 34502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 19921 - 19839
Alignment:
Q  147 accatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||||||||||    
T  19921 accataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaaattattat 19839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 45402658 - 45402757
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||| ||| ||||||||||||||    
T  45402658 gggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttttaatgaaattattat 45402757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 13420611 - 13420718
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||| |||||| |||||||||||| |||||| ||| |  || |||||  ||||| ||||    
T  13420611 aaaattaggggtatggaatactgaaaccataagtatggtgtaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttaagtgaa 13420710  T
Q  222 attattat 229  Q
    ||||||||    
T  13420711 attattat 13420718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 6797174 - 6797272
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  6797174 gggtatggattactgaaaccata-gtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 6797272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 12283471 - 12283415
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  12283471 attactgaaaccataagtatggtttaatgattttgacagtattgtatgtgaaaccaa 12283415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 4721001 - 4721072
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||  ||||| ||||||    
T  4721001 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgtcatatgtaaaacca 4721072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 10564737 - 10564670
Alignment:
Q  126 ttaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||| ||| || ||||||||||||    
T  10564737 ttaggggcatggattactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaacca 10564670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 12283159 - 12283088
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||  ||| |||||||||    
T  12283159 attactgaaactataagtatggtttaatggttttgatagtgttctatgtgaaaccaacataattgtctaatg 12283088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 12283362 - 12283291
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||| ||||||| |||||||||| ||| ||||||||||||| ||| |||||||||    
T  12283362 attactgaaaccataagtatgatttaatggttttgacagtcttcaatgtgaaaccaaaataattgtctaatg 12283291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 13420410 - 13420517
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    |||| |||||||||||| ||||||||||||| |||||||| |||| |||||| |||||||| ||| |||||| ||| |  || |||||  ||||| ||||    
T  13420410 aaaactaggggtatggaatactgaaaccataagtatggttgaatggttttgatagtgttctttgtaaaaccatacttatggtgtaatggttttaagtgaa 13420509  T
Q  222 attattat 229  Q
    ||||||||    
T  13420510 attattat 13420517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 12283580 - 12283524
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||| ||||||||| ||||||||||||| |||||||||| || |||||||||||||    
T  12283580 attaccgaaaccataagtatggtttaatggttttgacagtattgtatgtgaaaccaa 12283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 10564233 - 10564162
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| |||||  |||||| |||||||||| | | ||||||||||||| ||| |||||||||    
T  10564233 attactgaaaccataagtatgacttaatggttttgacagtctacaatgtgaaaccaaaataattgtctaatg 10564162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 6797319 - 6797389
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaat 208  Q
    |||||||||||||||  |||||||||||| |||||| ||| || |||| ||||||||| ||| ||||||||    
T  6797319 attactgaaaccataattatggtttaatggttttgatagtcttttatgagaaaccaaaataattgtctaat 6797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 10564531 - 10564479
Alignment:
Q  141 actgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||||||| ||||||||||||| |||||| ||| || ||||||||||||    
T  10564531 actgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaacca 10564479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 10563907 - 10563851
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||||||| ||||||||||| | |||||| ||| ||  ||||||||||||    
T  10563907 attactgaaaccataagtatggtttaacggttttgatagtattaaatgtgaaaccaa 10563851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 10564338 - 10564286
Alignment:
Q  142 ctgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||| ||||| ||||||| |||||| ||| || |||||||||||||    
T  10564338 ctgaaaccataagtatgatttaatggttttgatagtattgtatgtgaaaccaa 10564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 10564626 - 10564574
Alignment:
Q  141 actgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||||||| ||||||||||||| |||||| | | || ||||||||||||    
T  10564626 actgaaaccataagtatggtttaatggttttgatattattgtatgtgaaacca 10564574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 12283704 - 12283668
Alignment:
Q  126 ttaggggtatggattactgaaaccatacgtatggttt 162  Q
    |||||| |||||||||||||||||||| |||||||||    
T  12283704 ttagggatatggattactgaaaccataagtatggttt 12283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 2847898 - 2847997
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||| ||| ||||||||||||||    
T  2847898 gggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttttaatgaaattattat 2847997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 809638 - 809745
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  809638 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 809737  T
Q  222 attattat 229  Q
    ||||||||    
T  809738 attattat 809745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 809839 - 809910
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  809839 aaaattaggggtatggaatactaaaaccataagtatggtttaatgattttgatagtgttctatgtaaaacca 809910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 810210 - 810297
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||| |||| |||  |||||||| ||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||    
T  810210 aaaattaggggtgtggaataccaaaaccataagtatggtttaatggttttgatagtgtcctatgtgaaaccaaactaattgtctaatg 810297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 9561060 - 9561151
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||| |||||||||||||||||||| | | || ||| |||||||||| ||| |||||||||  ||||||||||||||||||    
T  9561060 attactgaaaccataagtatggtttaatgattttgatattcttgtatatgaaaccaaaataattgtctaatgtttttaaatgaaattattat 9561151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 20588032 - 20588131
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||| ||| ||| ||||||||||    
T  20588032 gggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttttaataaaattattat 20588131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 55780378 - 55780307
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||| |||||||||    
T  55780378 attactgaaaccataagtatggtttaatggttttgatagtattctatgtgaaaccaaactaattgtctaatg 55780307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 55844558 - 55844487
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||| |||||||||    
T  55844558 attactgaaaccataagtatggtttaatggttttgatagtattctatgtgaaaccaaactaattgtctaatg 55844487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 810009 - 810113
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  810009 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 810108  T
Q  222 attat 226  Q
    |||||    
T  810109 attat 810113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 808726 - 808833
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||| || ||||| |||||| ||| |  || |||||  |||| |||||    
T  808726 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtattatatgtaaaaccatacttatggtgtaatggttttagatgaa 808825  T
Q  222 attattat 229  Q
    ||||||||    
T  808826 attattat 808833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 808927 - 808998
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  808927 aaaattaggggtatggaatactaaaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 808998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 809097 - 809204
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||| || ||||| |||||| ||| |  || |||||  |||| |||||    
T  809097 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtattatatgtaaaaccatacttatggtgtaatggttttagatgaa 809196  T
Q  222 attattat 229  Q
    ||||||||    
T  809197 attattat 809204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 809298 - 809405
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||  || ||||| |||||| ||| |  || |||||  |||| |||||    
T  809298 aaaattaggggtatggaatactgaaaccataagtatggtttaatgattttgatagaattatatgtaaaaccatacttatggtgtaatggttttagatgaa 809397  T
Q  222 attattat 229  Q
    ||||||||    
T  809398 attattat 809405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 809468 - 809539
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||||    
T  809468 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaacca 809539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 9561583 - 9561653
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaat 208  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||||||| |||| ||| ||||||||    
T  9561583 attactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaatcaaaataattgtctaat 9561653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 54754413 - 54754342
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||  ||||| ||||||    
T  54754413 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgtcatatgtaaaacca 54754342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 34986374 - 34986303
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| ||| ||||||| ||||||||| ||| |||||||||    
T  34986374 attactgaaaccataattatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatg 34986303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 54757783 - 54757712
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||||||| || ||||||    
T  54757783 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgttctaggtaaaacca 54757712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 9561198 - 9561269
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||| ||||||| |||||| | | ||| ||||||||||||| ||| |||||||||    
T  9561198 attactgaaaccataagtatgatttaatggttttgataatcttcaatgtgaaaccaaaataattgtctaatg 9561269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 54756778 - 54756707
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  54756778 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 54756707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 54756979 - 54756908
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  54756979 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 54756908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 54757582 - 54757511
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||| ||||| ||| || ||||||    
T  54757582 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttgatagtgtactaggtaaaacca 54757511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 54757180 - 54757109
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| |||||||||||||| |||||| ||| | |||||| ||||| ||| || ||||||    
T  54757180 aaaattaggtgtatggaatactgaaaccatacttatggtataacggttttgatagtgtactaggtaaaacca 54757109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 21173650 - 21173757
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||| ||| |  || |||||  |||| |||||    
T  21173650 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttagatgaa 21173749  T
Q  222 attattat 229  Q
    ||||||||    
T  21173750 attattat 21173757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 27970625 - 27970518
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||| ||| |  || |||||  |||| |||||    
T  27970625 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttagatgaa 27970526  T
Q  222 attattat 229  Q
    ||||||||    
T  27970525 attattat 27970518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 28048324 - 28048256
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtcta 206  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  28048324 attactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtcta 28048256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 44348231 - 44348347
Alignment:
Q  113 cattttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaat 212  Q
    ||||| || ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |    
T  44348231 catttgatcaaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttttatgtaaaaccatacttatggtgtaatggtt 44348330  T
Q  213 ttaaatgaaattattat 229  Q
    ||| |||||||||||||    
T  44348331 ttagatgaaattattat 44348347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 28056281 - 28056180
Alignment:
Q  127 taggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattat 226  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||| ||| || ||||| |||||||  ||| ||| |||||  |||||||||||||||    
T  28056281 taggggtatggaatactgaaaccataagtatggtttaatggttttgatagtcttgtatgtaaaaccaatataattgtgtaatggttttaaatgaaattat 28056182  T
Q  227 ta 228  Q
    ||    
T  28056181 ta 28056180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 27970254 - 27970183
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||| ||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||||||    
T  27970254 aaaattaagggtatggaatactgaaaccataaatatggtttaatggttttgacagtgttctatgtaaaacca 27970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 28056759 - 28056688
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||| ||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| ||||||    
T  28056759 aaaattaagggtatggaatactgaaaccataaatatggtttaatggttttgacagtgttctatgtaaaacca 28056688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 21173480 - 21173551
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||| |||||| |||||| ||||| ||||||    
T  21173480 aaaattaggggtatggaatactgaaaccataagtatgatttaatggttttgatagtgttatatgtaaaacca 21173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 27970424 - 27970353
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  27970424 aaaattaggggtatggaataccaaaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 27970353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 28056929 - 28056858
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  28056929 aaaattaggggtatggaataccaaaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 28056858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 44348611 - 44348718
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| |||| ||| |||| ||||||||||||| |||| | |||||||||||| |||||| ||| |  || |||||  |||| |||||    
T  44348611 aaaattaggggtatggaatactaaaatcataagtatggtttaatggttttaatagtgttctatgtaaaaccatacttatggtgtaatggttttagatgaa 44348710  T
Q  222 attattat 229  Q
    ||||||||    
T  44348711 attattat 44348718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 44350764 - 44350835
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||  ||||| ||||||    
T  44350764 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgtcatatgtaaaacca 44350835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 30771483 - 30771412
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||| |||||||| |||||| |||||| |||||||||| ||| ||||||||||||| ||| |||||||||    
T  30771483 attactaaaaccataagtatggcttaatggttttgacagtcttcaatgtgaaaccaaaataattgtctaatg 30771412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 44348441 - 44348512
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| || | |||||||| ||||||||||||| |||||| |||||| ||||| ||||||    
T  44348441 aaaattaggggtatggaatattaaaaccataagtatggtttaatggttttgatagtgttatatgtaaaacca 44348512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 27970795 - 27970726
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaac 191  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||| ||||||   |||||||||| ||||    
T  27970795 aaaattaggggtatggaatactaaaaccataagtatggtttaatggttttgattttgttctatgtaaaac 27970726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 24024558 - 24024629
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| | | ||||||| ||||||||| ||| |||||||||    
T  24024558 attactgaaaccataattatggtttaatggttttgataatcttctatgagaaaccaaaataattgtctaatg 24024629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 30771369 - 30771316
Alignment:
Q  141 actgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    |||||||||||| |||||| |||||| |||||||||| ||| ||||||||||||    
T  30771369 actgaaaccataagtatggcttaatggttttgacagtcttcaatgtgaaaccaa 30771316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 30767614 - 30767566
Alignment:
Q  145 aaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  30767614 aaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 30767566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 30771777 - 30771729
Alignment:
Q  145 aaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  30771777 aaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 30771729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 28057097 - 28057023
Alignment:
Q  155 tatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||||| |||||| |||||||||||| |||||| ||| |  || |||||  |||| |||||||||||||    
T  28057097 tatggtttaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttagatgaaattattat 28057023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 37223668 - 37223561
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| |||||  || |||||  |||| |||||    
T  37223668 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatactaatggtgtaatggttttagatgaa 37223569  T
Q  222 attattat 229  Q
    ||||||||    
T  37223568 attattat 37223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 37224008 - 37223901
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||| |||| |||||    
T  37224008 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatgattttagatgaa 37223909  T
Q  222 attattat 229  Q
    ||||||||    
T  37223908 attattat 37223901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 19845892 - 19845821
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  19845892 attacagaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaactaattgtctaatg 19845821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 37223498 - 37223434
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgt 186  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  37223498 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgacagtgttatatgt 37223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 13590745 - 13590646
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||| ||| || |||||||||| ||  ||| ||| |||||| ||| ||||||||||||||    
T  13590745 gggtatggattactgaaaccataagtatgatttaatggttttgatagtcttgtatgtgaaacgaagataattgtgtaatgatttttaatgaaattattat 13590646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 37223838 - 37223731
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||    
T  37223838 aaaattagggatatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaa 37223739  T
Q  222 attattat 229  Q
    ||||||||    
T  37223738 attattat 37223731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 37224169 - 37224071
Alignment:
Q  131 ggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||| ||||| |||||| ||| |  || |||||  |||| |||||||||||||    
T  37224169 ggtatggaatactgaaaccataagtatggtttaatgattttgatagtgttatatgtaaaaccatacttatggtgtaatggttttagatgaaattattat 37224071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 19846130 - 19846041
Alignment:
Q  140 tactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||  |||  || |||||  ||||||||||||||||||    
T  19846130 tactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaaccaagataagggtgtaatggttttaaatgaaattattat 19846041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 5077382 - 5077454
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatga 210  Q
    |||||||||||||||| |||||||||||| |||||| ||| ||||||| ||||||||| ||| ||||||||||    
T  5077382 attactgaaaccatacttatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatga 5077454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 20481370 - 20481272
Alignment:
Q  131 ggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||| || ||||| |||||||  ||| ||| |||||  ||| ||||||| ||||||    
T  20481370 ggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtaaaaccaagataattgtgtaatggtttttaatgaaagtattat 20481272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 37223328 - 37223259
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaac 191  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||    
T  37223328 aaaattagaggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttatatgtaaaac 37223259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 20372468 - 20372376
Alignment:
Q  137 gattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||| ||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  20372468 gattaccgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 20372376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 32233268 - 32233170
Alignment:
Q  131 ggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||| ||| ||||||||||||||    
T  32233268 ggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatgatttttaatgaaattattat 32233170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 11974995 - 11974924
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  11974995 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 11974924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 11975173 - 11975094
Alignment:
Q  114 attttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||| |||||||||||| ||||||    
T  11975173 atttgattaaaattaggggtatggaatactgaaaccataagtatgatttaatggttttgatagtgttctatgtaaaacca 11975094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 40219301 - 40219372
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  40219301 attactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatg 40219372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 40219502 - 40219573
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  40219502 attactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatg 40219573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 40219703 - 40219774
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  40219703 attactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatg 40219774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 40219904 - 40219975
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  40219904 attactgaaaccataagtatggtctaatggttttgatagtgttctatgtgaaaccaaactaatggtctaatg 40219975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 11975335 - 11975264
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||| ||||||||| ||||||||| ||| ||||||||||||| |||||| |||||||||||| ||||||    
T  11975335 aaaattaagggtatggaatactgaaactataagtatggtttaatggttttgatagtgttctatgtaaaacca 11975264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 11975505 - 11975434
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||| ||| ||||||||||||| ||||||| ||||| |||||| |||||||||||| ||||||    
T  11975505 aaaattaggggtagggaatactgaaaccataagtatggtataatggttttgatagtgttctatgtaaaacca 11975434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 32233123 - 32233052
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||| ||||| |||  |||||||||||| |||||| ||| ||||||| ||||||||| ||| |||||||||    
T  32233123 attaccgaaactataattatggtttaatggttttgatagtcttctatgagaaaccaaaataattgtctaatg 32233052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 41568957 - 41568902
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    |||||||||||| ||  ||||||||||||||||||| ||| ||||||| |||||||    
T  41568957 attactgaaaccgtaattatggtttaatgattttgatagtcttctatgagaaacca 41568902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 5999 - 5927
Alignment:
Q  114 attttattaaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgt 186  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  5999 attttatcaaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgt 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 8846 - 8953
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaa 221  Q
    |||| |||||||||||| ||||||||||||| |||||||| |||| |||||| |||||||||||| |||||| ||| |  || |||||  |||| |||||    
T  8846 aaaactaggggtatggaatactgaaaccataagtatggttgaatggttttgatagtgttctatgtaaaaccatacttatggtgtaatggttttagatgaa 8945  T
Q  222 attattat 229  Q
    ||||||||    
T  8946 attattat 8953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 52; Significance: 6e-21; HSPs: 5)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 101 - 30
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  101 attactgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaaccaaaataattgtctaatg 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 873 - 810
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||||||||||||||| |||||| |||||| |||||| ||| || |||||||||||||    
T  873 gggtatggattactgaaaccataagtatgg-ttaatggttttgatagtcttgtatgtgaaaccaa 810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 626 - 536
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||| |||||||||||| | ||||| ||| ||| ||||||||||||| ||| | |||| ||  ||||||| ||||||||||    
T  626 attactgaaaccataagtatggtttaat-agtttgaaagtcttcaatgtgaaaccaaaataattatctagtggttttaaataaaattattat 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 489 - 418
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||||||| ||| |||||| ||| |   ||||||||||||| ||| |||||||||    
T  489 attactgaaaccataagtatggtttcatggttttgatagtctctaatgtgaaaccaaagtaattgtctaatg 418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 757 - 666
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||| |||| |||| |||||||| |||| | ||| || ||||| |||||||  ||| ||| |||||  ||||||||||||||||||    
T  757 attactgaaatcataagtatcgtttaatgttttttatagtcttgtatgtcaaaccaagataattgtgtaatggttttaaatgaaattattat 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 126238 - 126309
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  126238 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgttctatgtaaaacca 126309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 126408 - 126479
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||| ||||||||| |||||||||||||  |||||||||||| |||||| |||||||||||| ||||||    
T  126408 aaaattaagggtatggaatactgaaaccataaatatggtttaatggttttgatagtgttctatgtaaaacca 126479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 128561 - 128632
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||  ||||| ||||||    
T  128561 aaaattaggggtatggaatactgaaaccataagtatggtttaatggttttgatagtgtcatatgtaaaacca 128632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 119480 - 119381
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  119480 gggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 119334 - 119263
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| ||| || |||| ||||||||| ||| |||||||||    
T  119334 attactgaaaccataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatg 119263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 168400 - 168329
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||| | |||||||    
T  168400 attactgaaaccataagtatgatttaatggttttgatagtgttctatgtgaaaccaaactaattttctaatg 168329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 168594 - 168523
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||||| ||| |||||||||    
T  168594 attactgaaaccatacgtatggtttaatggttttgatagttttcaatgtgaaaccaaaataattgtctaatg 168523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 168727 - 168673
Alignment:
Q  140 tactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||    
T  168727 tactgaaaccataagtatggtttaatggttttgatagtgttgtatgtaaaaccaa 168673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 1881 - 1783
Alignment:
Q  131 ggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||| ||||||    
T  1881 ggtatggattactgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaagtattat 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 1736 - 1665
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| | | || |||| ||||||||| ||| |||||||||    
T  1736 attactgaaaccataattatggtttaatggttttgatattcttttatgagaaaccaaaataattgtctaatg 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 22799 - 22871
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatga 210  Q
    ||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||| ||| ||| ||||||    
T  22799 attactgaaaccataagtatggtttaatgattttgatagtattgtatgtgaaaccaaaataattgtgtaatga 22871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 16121 - 16178
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaa 195  Q
    ||||||||||||||| ||||||||||||| |||||| ||| || ||||||||||||||    
T  16121 attactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccaaa 16178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 22603 - 22659
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||    
T  22603 attactgaaaccataagtatggtttaatggttttgatagtattgtatgtgaaaccaa 22659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 16230 - 16301
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||| |||| ||| |||||| |||||| |||||||||| ||| ||||||||||||| ||| ||| |||||    
T  16230 attactaaaactataagtatggcttaatggttttgacagtcttcaatgtgaaaccaaaataattgtgtaatg 16301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 16512 - 16568
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaa 194  Q
    ||||||||||||||| ||||||||||||| |||| | ||| ||  ||||||||||||    
T  16512 attactgaaaccataagtatggtttaatggttttaatagtattaaatgtgaaaccaa 16568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 209604 - 209505
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||||||||||||||||||| |||| |||||||| |||||| | | || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  209604 gggtatggattactgaaaccataagtatagtttaatggttttgataatcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 209505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 209458 - 209388
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaat 208  Q
    ||||||||||| |||  |||||||||||| |||||| ||| || |||| ||||||||| ||| ||||||||    
T  209458 attactgaaacaataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaat 209388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 51630 - 51538
Alignment:
Q  137 gattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    |||||| ||||||||| ||||||||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  51630 gattaccgaaaccataagtatggtttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 51538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 51491 - 51420
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||||||||||  |||||||||||| |||||| ||| || |||| ||||||||| ||| |||||||||    
T  51491 attactgaaaccataattatggtttaatggttttgatagtcttatatgagaaaccaaaataattgtctaatg 51420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 7130 - 7229
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||| ||||||||||||||| ||||||||||||  |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||| ||||||||||    
T  7130 gggtatgaattactgaaaccataagtatggtttaattgttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaataaaattattat 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 450479 - 450380
Alignment:
Q  130 gggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatgaatttaaatgaaattattat 229  Q
    ||||||| |||||||||| |||| ||||| ||||||| |||||| ||| || |||||||||||||  ||| ||| |||||  ||| ||||||||||||||    
T  450479 gggtatgaattactgaaatcataagtatgatttaatggttttgatagtcttgtatgtgaaaccaagataattgtgtaatggtttttaatgaaattattat 450380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 450326 - 450263
Alignment:
Q  146 aaccatacgtatggtttaatgattttgacagtgttctatgtgaaaccaaactaactgtctaatg 209  Q
    |||||||  ||||||||||||||||||| ||| ||||||| ||||||||| ||| |||||||||    
T  450326 aaccataattatggtttaatgattttgatagtcttctatgagaaaccaaaataattgtctaatg 450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 6449 - 6397
Alignment:
Q  138 attactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaa 190  Q
    |||| |||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  6449 attattgaaaccataagtatggtttaatggttttgatagtgttctatgtgaaa 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 166 - 95
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttgacagtgttctatgtgaaacca 193  Q
    ||||||||| ||||||| ||||||||||||| ||||||  ||||| |||||| ||||| ||| || ||||||    
T  166 aaaattaggtgtatggaatactgaaaccataagtatgggataatggttttgatagtgtactaggtaaaacca 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 365 - 314
Alignment:
Q  122 aaaattaggggtatggattactgaaaccatacgtatggtttaatgattttga 173  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||| ||||||    
T  365 aaaattaggtgtatggaatactgaaaccataagtatggtataatggttttga 314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University