View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1412_low_54 (Length: 289)

Name: NF1412_low_54
Description: NF1412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1412_low_54
NF1412_low_54
[»] chr7 (41 HSPs)
chr7 (86-275)||(19590884-19591073)
chr7 (86-275)||(38859000-38859189)
chr7 (87-275)||(32004612-32004800)
chr7 (89-275)||(35288903-35289089)
chr7 (86-275)||(37787126-37787315)
chr7 (88-275)||(19830779-19830965)
chr7 (87-275)||(2658837-2659025)
chr7 (87-275)||(34533789-34533977)
chr7 (92-275)||(4641803-4641983)
chr7 (102-275)||(29099863-29100036)
chr7 (86-272)||(23952727-23952914)
chr7 (87-249)||(19830418-19830579)
chr7 (88-249)||(37786766-37786926)
chr7 (89-249)||(19590525-19590684)
chr7 (86-249)||(2659226-2659388)
chr7 (88-249)||(38858642-38858802)
chr7 (87-249)||(34534177-34534338)
chr7 (87-249)||(35289287-35289448)
chr7 (89-249)||(32005000-32005159)
chr7 (92-249)||(29100237-29100393)
chr7 (92-249)||(4641443-4641599)
chr7 (95-249)||(23953115-23953268)
chr7 (86-205)||(38160948-38161067)
chr7 (87-249)||(4478086-4478247)
chr7 (87-215)||(28583437-28583565)
chr7 (90-215)||(28584341-28584466)
chr7 (188-275)||(4477800-4477887)
chr7 (177-269)||(9393823-9393914)
chr7 (88-249)||(34595159-34595319)
chr7 (91-249)||(9181534-9181691)
chr7 (92-249)||(35578902-35579057)
chr7 (88-228)||(49064033-49064171)
chr7 (194-249)||(32427407-32427461)
chr7 (86-249)||(48247978-48248141)
chr7 (183-249)||(27245297-27245363)
chr7 (86-249)||(7732485-7732647)
chr7 (92-249)||(25637585-25637741)
chr7 (208-249)||(26026437-26026477)
chr7 (213-249)||(26048071-26048107)
chr7 (213-249)||(28687886-28687922)
chr7 (177-249)||(35579273-35579344)
[»] chr6 (43 HSPs)
chr6 (86-275)||(22219712-22219901)
chr6 (86-275)||(11445346-11445535)
chr6 (86-275)||(12935154-12935343)
chr6 (92-249)||(10899942-10900099)
chr6 (88-275)||(20741460-20741650)
chr6 (87-275)||(23075487-23075675)
chr6 (92-275)||(18504922-18505105)
chr6 (88-275)||(31470314-31470501)
chr6 (86-275)||(2319669-2319857)
chr6 (89-275)||(18257496-18257682)
chr6 (90-269)||(15827639-15827819)
chr6 (87-249)||(18257135-18257296)
chr6 (87-249)||(20741098-20741259)
chr6 (89-249)||(10900316-10900475)
chr6 (89-249)||(11276968-11277127)
chr6 (88-249)||(11276589-11276750)
chr6 (88-249)||(15828027-15828187)
chr6 (90-249)||(31470702-31470860)
chr6 (89-275)||(4811616-4811801)
chr6 (87-249)||(12935543-12935704)
chr6 (86-249)||(28472634-28472795)
chr6 (86-249)||(29859823-29859984)
chr6 (86-249)||(11444984-11445146)
chr6 (89-249)||(1149817-1149977)
chr6 (92-249)||(2322605-2322760)
chr6 (90-249)||(18505305-18505463)
chr6 (88-186)||(23073998-23074096)
chr6 (89-249)||(4811372-4811531)
chr6 (91-215)||(29033436-29033560)
chr6 (87-177)||(1149463-1149553)
chr6 (92-215)||(3835145-3835268)
chr6 (91-202)||(29035069-29035180)
chr6 (86-206)||(18296142-18296262)
chr6 (182-249)||(35163573-35163639)
chr6 (219-275)||(1149558-1149614)
chr6 (202-268)||(32836114-32836179)
chr6 (89-145)||(22534214-22534270)
chr6 (182-249)||(31573817-31573884)
chr6 (182-250)||(25468943-25469011)
chr6 (231-275)||(28472997-28473041)
chr6 (213-249)||(28636583-28636619)
chr6 (213-249)||(31073529-31073565)
chr6 (157-217)||(33095782-33095842)
[»] chr4 (71 HSPs)
chr4 (87-275)||(15523233-15523421)
chr4 (89-275)||(22434179-22434365)
chr4 (89-275)||(45082783-45082969)
chr4 (83-275)||(20470870-20471062)
chr4 (89-275)||(46193405-46193591)
chr4 (89-275)||(25447247-25447433)
chr4 (86-275)||(23494802-23494991)
chr4 (89-275)||(12234688-12234874)
chr4 (87-275)||(54995067-54995255)
chr4 (88-275)||(11153145-11153332)
chr4 (88-275)||(25938030-25938217)
chr4 (87-275)||(51021155-51021342)
chr4 (92-270)||(48526545-48526723)
chr4 (86-275)||(4219918-4220107)
chr4 (92-275)||(18751602-18751785)
chr4 (91-275)||(2118295-2118480)
chr4 (106-275)||(12503453-12503622)
chr4 (87-249)||(25447622-25447783)
chr4 (86-249)||(12234326-12234488)
chr4 (91-249)||(33109686-33109843)
chr4 (91-249)||(38962205-38962362)
chr4 (89-249)||(11153533-11153692)
chr4 (86-249)||(25937667-25937829)
chr4 (91-249)||(46193791-46193948)
chr4 (88-249)||(15523620-15523780)
chr4 (87-215)||(33109883-33110011)
chr4 (91-249)||(4219559-4219716)
chr4 (91-249)||(23494445-23494602)
chr4 (86-249)||(22434564-22434724)
chr4 (86-249)||(51020794-51020956)
chr4 (88-249)||(48526195-48526354)
chr4 (88-249)||(22170323-22170482)
chr4 (92-249)||(2118682-2118837)
chr4 (86-203)||(18763951-18764068)
chr4 (86-249)||(45082429-45082589)
chr4 (87-249)||(54995454-54995614)
chr4 (90-206)||(20958288-20958403)
chr4 (89-206)||(35363028-35363146)
chr4 (87-195)||(48708293-48708401)
chr4 (88-217)||(10258304-10258433)
chr4 (90-206)||(44892576-44892692)
chr4 (111-206)||(43243708-43243803)
chr4 (87-203)||(48293592-48293708)
chr4 (87-203)||(48713777-48713893)
chr4 (92-215)||(16690939-16691062)
chr4 (90-215)||(44890518-44890643)
chr4 (111-215)||(43281210-43281313)
chr4 (89-215)||(48294961-48295088)
chr4 (157-249)||(12503822-12503913)
chr4 (147-215)||(43242328-43242396)
chr4 (88-159)||(16318251-16318322)
chr4 (89-215)||(16691491-16691616)
chr4 (96-201)||(20957196-20957301)
chr4 (79-249)||(17503964-17504132)
chr4 (89-197)||(55189528-55189636)
chr4 (157-249)||(17504346-17504437)
chr4 (188-249)||(35193406-35193466)
chr4 (150-206)||(44220805-44220861)
chr4 (92-249)||(229546-229702)
chr4 (92-262)||(40160465-40160633)
chr4 (89-249)||(34789382-34789541)
chr4 (89-215)||(30597940-30598065)
chr4 (231-269)||(10795692-10795730)
chr4 (88-249)||(12593023-12593183)
chr4 (127-249)||(24336150-24336271)
chr4 (194-268)||(35193672-35193744)
chr4 (188-249)||(14439926-14439987)
chr4 (208-249)||(46736774-46736814)
chr4 (213-249)||(26974407-26974443)
chr4 (86-249)||(34789769-34789932)
chr4 (213-249)||(45838934-45838970)
[»] chr8 (35 HSPs)
chr8 (88-275)||(13224998-13225185)
chr8 (86-275)||(19176287-19176476)
chr8 (89-275)||(41681493-41681679)
chr8 (92-275)||(9928912-9929095)
chr8 (88-275)||(44831246-44831433)
chr8 (90-275)||(31133579-31133764)
chr8 (88-275)||(11656816-11657003)
chr8 (92-275)||(12572210-12572393)
chr8 (86-275)||(33742919-33743107)
chr8 (91-275)||(33328499-33328683)
chr8 (86-248)||(34540934-34541096)
chr8 (87-249)||(41681132-41681292)
chr8 (86-249)||(19176676-19176838)
chr8 (87-244)||(4629795-4629952)
chr8 (81-249)||(12571855-12572023)
chr8 (86-249)||(11656452-11656615)
chr8 (93-249)||(13224645-13224799)
chr8 (82-249)||(31133213-31133379)
chr8 (88-249)||(9930043-9930203)
chr8 (92-249)||(33328161-33328317)
chr8 (80-249)||(44831631-44831799)
chr8 (89-249)||(9178022-9178180)
chr8 (87-197)||(11336959-11337069)
chr8 (181-275)||(9177724-9177818)
chr8 (136-249)||(33743305-33743417)
chr8 (92-249)||(4630178-4630328)
chr8 (88-201)||(8073985-8074097)
chr8 (86-215)||(10918123-10918252)
chr8 (86-249)||(35427199-35427361)
chr8 (168-215)||(43958264-43958311)
chr8 (194-249)||(18805267-18805321)
chr8 (90-249)||(28254813-28254971)
chr8 (87-122)||(9177665-9177700)
chr8 (183-249)||(18049684-18049750)
chr8 (86-134)||(43958206-43958254)
[»] scaffold0951 (2 HSPs)
scaffold0951 (83-273)||(2028-2218)
scaffold0951 (87-249)||(1665-1826)
[»] chr3 (83 HSPs)
chr3 (89-275)||(37727289-37727475)
chr3 (86-275)||(17464488-17464677)
chr3 (86-275)||(43973799-43973988)
chr3 (87-275)||(4275723-4275911)
chr3 (88-268)||(39555577-39555757)
chr3 (88-275)||(31778652-31778839)
chr3 (88-275)||(20840920-20841107)
chr3 (88-275)||(27393660-27393847)
chr3 (89-275)||(25853234-25853420)
chr3 (86-275)||(5137340-5137529)
chr3 (86-275)||(22424811-22425000)
chr3 (86-275)||(29801775-29801964)
chr3 (89-275)||(23644823-23645010)
chr3 (92-275)||(24300560-24300742)
chr3 (92-275)||(32534962-32535145)
chr3 (88-273)||(30098121-30098309)
chr3 (87-267)||(26837358-26837538)
chr3 (92-273)||(41047060-41047239)
chr3 (92-275)||(26274570-26274753)
chr3 (87-249)||(31779038-31779199)
chr3 (85-249)||(20840556-20840719)
chr3 (89-249)||(39555963-39556122)
chr3 (86-245)||(48452986-48453144)
chr3 (92-249)||(41046703-41046859)
chr3 (87-249)||(5136978-5137139)
chr3 (86-249)||(24300942-24301104)
chr3 (88-249)||(37726928-37727088)
chr3 (88-249)||(23644461-23644621)
chr3 (89-249)||(32535345-32535508)
chr3 (88-249)||(27393963-27394123)
chr3 (89-249)||(43973441-43973600)
chr3 (86-249)||(30104479-30104640)
chr3 (89-206)||(29801356-29801473)
chr3 (86-249)||(26837742-26837903)
chr3 (93-239)||(22425209-22425354)
chr3 (91-249)||(25853613-25853770)
chr3 (92-215)||(25612396-25612519)
chr3 (88-249)||(17464877-17465038)
chr3 (86-249)||(26274953-26275114)
chr3 (89-215)||(23228427-23228552)
chr3 (90-203)||(51473429-51473542)
chr3 (86-215)||(51474753-51474882)
chr3 (89-215)||(50116828-50116954)
chr3 (90-206)||(32697128-32697244)
chr3 (87-200)||(45965936-45966049)
chr3 (87-206)||(37220555-37220674)
chr3 (91-215)||(25420560-25420684)
chr3 (87-175)||(37222030-37222118)
chr3 (90-186)||(25419145-25419242)
chr3 (114-203)||(18010176-18010265)
chr3 (86-249)||(27200079-27200240)
chr3 (90-249)||(37075687-37075847)
chr3 (194-249)||(55192222-55192276)
chr3 (183-269)||(8873784-8873869)
chr3 (177-265)||(2323466-2323553)
chr3 (86-249)||(49407793-49407954)
chr3 (88-249)||(51827956-51828116)
chr3 (194-268)||(50900637-50900710)
chr3 (87-249)||(55389603-55389764)
chr3 (92-249)||(22370599-22370756)
chr3 (88-203)||(23227261-23227370)
chr3 (86-249)||(52237204-52237366)
chr3 (92-203)||(32695706-32695817)
chr3 (86-249)||(36701483-36701645)
chr3 (86-249)||(50900915-50901076)
chr3 (86-249)||(55389984-55390146)
chr3 (213-249)||(32730776-32730812)
chr3 (86-249)||(52375718-52375880)
chr3 (182-249)||(8874073-8874138)
chr3 (182-249)||(40275187-40275254)
chr3 (87-249)||(47431694-47431856)
chr3 (87-249)||(49720369-49720530)
chr3 (183-249)||(43222776-43222842)
chr3 (188-249)||(50662799-50662860)
chr3 (183-249)||(51828344-51828410)
chr3 (188-249)||(14654578-14654639)
chr3 (188-249)||(37847207-37847267)
chr3 (188-249)||(40839039-40839100)
chr3 (188-249)||(43222488-43222549)
chr3 (208-249)||(52236935-52236975)
chr3 (205-249)||(36701224-36701267)
chr3 (213-249)||(40838775-40838811)
chr3 (213-249)||(52375450-52375486)
[»] chr5 (56 HSPs)
chr5 (87-275)||(5818927-5819115)
chr5 (87-275)||(19359495-19359683)
chr5 (86-275)||(8647797-8647986)
chr5 (88-275)||(8461290-8461477)
chr5 (89-275)||(164191-164376)
chr5 (87-275)||(18182968-18183156)
chr5 (86-275)||(24331556-24331747)
chr5 (91-273)||(14215243-14215425)
chr5 (91-275)||(2864756-2864940)
chr5 (88-275)||(29454739-29454926)
chr5 (88-275)||(25000448-25000635)
chr5 (87-275)||(16018946-16019134)
chr5 (89-268)||(15709335-15709513)
chr5 (86-249)||(18183355-18183517)
chr5 (87-249)||(2865141-2865302)
chr5 (89-249)||(5819315-5819474)
chr5 (89-249)||(8647438-8647597)
chr5 (87-249)||(24362222-24362383)
chr5 (89-246)||(19359136-19359292)
chr5 (91-275)||(15371873-15372060)
chr5 (88-249)||(29455128-29455288)
chr5 (86-249)||(15372259-15372421)
chr5 (86-249)||(15708968-15709129)
chr5 (87-249)||(8460928-8461089)
chr5 (95-275)||(24361843-24362022)
chr5 (85-249)||(14215629-14215792)
chr5 (95-275)||(24325218-24325397)
chr5 (86-249)||(164577-164739)
chr5 (87-249)||(14463907-14464067)
chr5 (88-206)||(16018588-16018705)
chr5 (89-215)||(7349436-7349562)
chr5 (90-206)||(4222150-4222266)
chr5 (91-249)||(24331946-24332107)
chr5 (89-206)||(4623148-4623265)
chr5 (89-215)||(7348559-7348685)
chr5 (111-249)||(25000112-25000249)
chr5 (89-206)||(4219663-4219780)
chr5 (95-215)||(6019189-6019309)
chr5 (171-249)||(14462686-14462768)
chr5 (90-217)||(6018315-6018441)
chr5 (177-272)||(10721873-10721967)
chr5 (177-268)||(27307148-27307238)
chr5 (90-275)||(28494845-28495029)
chr5 (88-249)||(41834446-41834606)
chr5 (102-215)||(4624644-4624757)
chr5 (87-249)||(28290031-28290192)
chr5 (188-249)||(28495228-28495288)
chr5 (188-249)||(32305916-32305976)
chr5 (91-268)||(16752938-16753114)
chr5 (140-206)||(13814155-13814226)
chr5 (194-249)||(27307445-27307499)
chr5 (177-275)||(13557079-13557176)
chr5 (87-249)||(15029696-15029857)
chr5 (91-249)||(22651347-22651504)
chr5 (188-249)||(16752680-16752740)
chr5 (213-249)||(28289807-28289843)
[»] chr2 (54 HSPs)
chr2 (88-275)||(18450829-18451016)
chr2 (82-275)||(40815338-40815531)
chr2 (87-275)||(22374684-22374872)
chr2 (86-275)||(43058692-43058880)
chr2 (86-276)||(7446704-7446894)
chr2 (87-275)||(11090879-11091067)
chr2 (88-275)||(28616973-28617160)
chr2 (92-273)||(40027501-40027682)
chr2 (87-275)||(1978468-1978656)
chr2 (90-275)||(239711-239896)
chr2 (86-249)||(26538464-26538627)
chr2 (89-275)||(3025822-3026006)
chr2 (92-268)||(8425358-8425533)
chr2 (86-275)||(14432500-14432689)
chr2 (86-249)||(239350-239511)
chr2 (87-249)||(11090519-11090680)
chr2 (87-249)||(22374318-22374479)
chr2 (88-249)||(40027139-40027299)
chr2 (86-249)||(40815731-40815893)
chr2 (86-249)||(18451217-18451379)
chr2 (87-249)||(1978106-1978267)
chr2 (88-249)||(26538096-26538256)
chr2 (89-215)||(28616613-28616739)
chr2 (89-249)||(43058333-43058492)
chr2 (88-215)||(20444748-20444875)
chr2 (92-249)||(14432145-14432301)
chr2 (87-207)||(28847122-28847242)
chr2 (86-249)||(3025463-3025624)
chr2 (86-204)||(20440461-20440579)
chr2 (92-249)||(8425746-8425902)
chr2 (88-246)||(7446341-7446497)
chr2 (90-204)||(35781093-35781207)
chr2 (89-215)||(35779708-35779834)
chr2 (91-215)||(8972239-8972363)
chr2 (91-202)||(15551501-15551612)
chr2 (91-206)||(15552482-15552596)
chr2 (17-88)||(16194986-16195057)
chr2 (86-249)||(28143417-28143578)
chr2 (88-248)||(31797166-31797324)
chr2 (87-249)||(14942231-14942394)
chr2 (86-249)||(20128124-20128286)
chr2 (86-249)||(62954-63116)
chr2 (87-249)||(44219642-44219803)
chr2 (89-249)||(42192240-42192399)
chr2 (78-249)||(11540025-11540195)
chr2 (88-249)||(42192629-42192790)
chr2 (188-249)||(33920710-33920771)
chr2 (183-249)||(43160397-43160463)
chr2 (188-249)||(5560937-5560998)
chr2 (188-249)||(13399520-13399581)
chr2 (208-249)||(15550793-15550833)
chr2 (88-249)||(20127735-20127896)
chr2 (213-249)||(4356143-4356179)
chr2 (213-249)||(4809002-4809038)
[»] chr1 (56 HSPs)
chr1 (87-275)||(50970276-50970464)
chr1 (90-275)||(4636330-4636515)
chr1 (86-275)||(21856039-21856228)
chr1 (91-275)||(17433574-17433758)
chr1 (88-275)||(39154379-39154566)
chr1 (89-275)||(29869978-29870164)
chr1 (97-275)||(33143925-33144103)
chr1 (90-275)||(5539817-5540002)
chr1 (90-275)||(8678542-8678727)
chr1 (87-275)||(15173453-15173640)
chr1 (88-275)||(18984478-18984665)
chr1 (87-275)||(15646190-15646378)
chr1 (89-249)||(29307327-29307487)
chr1 (89-262)||(26859059-26859232)
chr1 (90-273)||(5962579-5962762)
chr1 (86-249)||(9019348-9019511)
chr1 (88-249)||(50970664-50970824)
chr1 (87-249)||(18984117-18984278)
chr1 (88-249)||(5540204-5540364)
chr1 (88-249)||(15646581-15646741)
chr1 (89-249)||(29306953-29307112)
chr1 (91-249)||(33144305-33144462)
chr1 (88-249)||(29869619-29869779)
chr1 (89-249)||(8678928-8679086)
chr1 (89-275)||(17112282-17112467)
chr1 (92-249)||(15173099-15173255)
chr1 (92-249)||(5962964-5963120)
chr1 (86-239)||(9018970-9019122)
chr1 (89-249)||(21856429-21856588)
chr1 (89-249)||(17433216-17433375)
chr1 (87-249)||(26859446-26859606)
chr1 (91-249)||(39154021-39154178)
chr1 (88-215)||(52268289-52268416)
chr1 (86-175)||(2733416-2733505)
chr1 (91-205)||(52269177-52269291)
chr1 (80-189)||(47827033-47827141)
chr1 (86-269)||(45048504-45048684)
chr1 (149-249)||(4636033-4636131)
chr1 (86-249)||(44802558-44802720)
chr1 (91-164)||(47826966-47827039)
chr1 (86-249)||(17088527-17088688)
chr1 (182-249)||(17088243-17088309)
chr1 (188-249)||(45048253-45048313)
chr1 (89-170)||(50419725-50419806)
chr1 (86-249)||(9992151-9992314)
chr1 (182-249)||(8229732-8229799)
chr1 (182-249)||(17641751-17641818)
chr1 (86-249)||(39485062-39485223)
chr1 (188-249)||(9833539-9833599)
chr1 (177-246)||(44291701-44291769)
chr1 (188-249)||(44954613-44954674)
chr1 (213-249)||(8230028-8230064)
chr1 (188-248)||(29021252-29021311)
chr1 (213-249)||(34555767-34555803)
chr1 (213-249)||(44954349-44954385)
chr1 (87-218)||(50926658-50926789)
[»] scaffold0417 (2 HSPs)
scaffold0417 (89-268)||(10989-11168)
scaffold0417 (111-249)||(10643-10780)
[»] scaffold0007 (4 HSPs)
scaffold0007 (92-275)||(64664-64847)
scaffold0007 (88-249)||(64301-64461)
scaffold0007 (91-249)||(205755-205911)
scaffold0007 (177-249)||(205038-205109)
[»] scaffold1223 (2 HSPs)
scaffold1223 (89-249)||(1126-1286)
scaffold1223 (91-249)||(755-911)
[»] scaffold0273 (2 HSPs)
scaffold0273 (128-275)||(4242-4389)
scaffold0273 (87-249)||(4593-4754)
[»] scaffold0295 (2 HSPs)
scaffold0295 (91-269)||(5160-5334)
scaffold0295 (86-249)||(4790-4952)
[»] scaffold0157 (2 HSPs)
scaffold0157 (106-275)||(16855-17024)
scaffold0157 (157-249)||(16564-16655)
[»] scaffold0027 (2 HSPs)
scaffold0027 (92-249)||(42172-42329)
scaffold0027 (86-249)||(42545-42706)
[»] scaffold0019 (1 HSPs)
scaffold0019 (86-249)||(134059-134221)
[»] scaffold0432 (2 HSPs)
scaffold0432 (92-275)||(9935-10116)
scaffold0432 (92-249)||(10259-10414)
[»] scaffold0176 (2 HSPs)
scaffold0176 (88-249)||(18834-18993)
scaffold0176 (89-186)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (88-203)||(28674-28789)
[»] scaffold1585 (1 HSPs)
scaffold1585 (90-214)||(568-692)
[»] scaffold0076 (1 HSPs)
scaffold0076 (92-192)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (93-205)||(454-565)
[»] scaffold0057 (2 HSPs)
scaffold0057 (92-215)||(61877-62000)
scaffold0057 (87-163)||(61026-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (138-215)||(7707-7784)
[»] scaffold0712 (1 HSPs)
scaffold0712 (208-249)||(6778-6818)
[»] scaffold0709 (1 HSPs)
scaffold0709 (208-249)||(6796-6836)


Alignment Details
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 19591073 - 19590884
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19590974  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19590973 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 19590884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 38859189 - 38859000
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 38859090  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  38859089 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 38859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 32004612 - 32004800
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccctatgct 32004800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 35288903 - 35289089
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccctatgct 35289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 37787315 - 37787126
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttt 37787216  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  37787215 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccctatgct 37787126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 19830965 - 19830779
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccctatgct 19830779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 2658837 - 2659025
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||| ||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctacacctatgct 2659025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 34533789 - 34533977
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||| |||| |||| ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccctatgct 34533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 92 - 275
Target Start/End: Complemental strand, 4641983 - 4641803
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| ||||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacctctatgct 4641803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 29099863 - 29100036
Alignment:
Q  102 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 201  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  202 ctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| |  |||||||||||||| |||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacctctatgct 29100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 86 - 272
Target Start/End: Original strand, 23952727 - 23952914
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcc-tattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||||||||||||||||||||||| |||||||||| || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctat 272  Q
    | ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| || |||||| ||||||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccctat 23952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 19830418 - 19830579
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 19830579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 37786766 - 37786926
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 37786926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 19590525 - 19590684
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||| ||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagtttta 19590684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 2659388 - 2659226
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 2659226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 38858642 - 38858802
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  38858742 ttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 38858802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 34534338 - 34534177
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||| |||||||||  ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagtttta 34534177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 35289448 - 35289287
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| |||| || ||||| |  ||| | |||||||||||||| | |||||||    
T  35289348 gttgcatttttcgtcataccccccatttt-attctctaaaaacgcagagaaataatagtttta 35289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 32005159 - 32005000
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || ||||||||| || |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagtttta 32005000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 29100393 - 29100237
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| |||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  29100293 attttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 29100237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 4641443 - 4641599
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || ||||| |  ||||| ||| |||||||||||| |||||||    
T  4641543 atttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagtttta 4641599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 95 - 249
Target Start/End: Complemental strand, 23953268 - 23953115
Alignment:
Q  95 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 194  Q
    |||||| |||||||| ||||||||||  ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  195 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||| |||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  23953168 tttcgtcataccccccatttt-attctccaaaaacgcagagaaataacagtttta 23953115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 38160948 - 38161067
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||| |  ||||||||||||||||||||||||||  ||||||||||||| |||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttt 38161047  T
Q  186 tgttgcatttttcgtcctac 205  Q
    ||||||||||||||||||||    
T  38161048 tgttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 4478247 - 4478086
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||| |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || | |||  ||| |  ||||| |||||||||||||| |||||||||    
T  4478147 gttgcatttttcgtcttatc-cctcattttattctccaaaaacgcagagaaataacagtttta 4478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 28583437 - 28583565
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| || | |||| |||||||||||||||| || ||||| ||||||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  187 gttgcatttttcgtcctacctcctatttt 215  Q
     ||||||||||||||||||| || |||||    
T  28583537 attgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 28584466 - 28584341
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||||||||||||||||||  |||||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  190 gcatttttcgtcctacctcctatttt 215  Q
    | |||||||||| |||| || |||||    
T  28584366 gtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 4477800 - 4477887
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  |  ||||||||||||||||||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccctatgct 4477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 9393823 - 9393914
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 269  Q
    |||||| ||| ||||  |||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||| ||  || ||||||||||||    
T  9393823 tatcatgttttttgctgttttagtcctacctcctattttcaa-ctccagaaacacagtgaaatgacagttttaagcaattatagacctacccc 9393914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 34595319 - 34595159
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||| ||   ||||| || | |||||||| |||||||||  |||||||| | ||||||||  |||| | || |||||| |||    
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatc-gaacaaaatcgtccctaaactatcatgttt 34595221  T
Q  187 gttgcatttttcgtcctacctcct-attttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| || ||||| ||| |||||||| ||||||||||||| ||||||||||||||||    
T  34595220 -ttgcagttttagtgctacccccttattttcaa-ctccagaaacgcacagaaatgacagtttta 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 9181534 - 9181691
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |    ||||| || | |||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| |||||| |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 9181691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 35578902 - 35579057
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| | |  ||||| ||   |||| ||| ||||||||||  ||| |||  ||||||||| ||| |  || |||||| ||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||  |||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  35579001 agttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacattttta 35579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 49064033 - 49064171
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| ||||| ||   |||||||| ||||  ||||  ||| ||| |||||||||   ||| | || |||||| |||     
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatgttt- 49064131  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaa 228  Q
    ||||| |||| |||||| ||||||||||| |||||||||||    
T  49064132 ttgcacttttagtcctaactcctattttc-aactccagaaa 49064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 32427461 - 32427407
Alignment:
Q  194 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaa-ctctaaaaacgcagagaaatgacagtttta 32427407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 48248141 - 48247978
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |    ||||| || | |||| ||| |||||||  | |||| |||  ||||||||  |||||| || |||   |||    
T  48248141 ttaggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 48248042  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||| | ||||   |||| ||||||||||||||| ||||||||||||||||    
T  48248041 ttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagtttta 48247978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 27245297 - 27245363
Alignment:
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||| |||| |||||| |||||  |||| ||||||||||||||| |||||||| |||||||    
T  27245297 tttttttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagtttta 27245363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 7732485 - 7732647
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    ||||||||||||||| |||||||| | |  |||||  | | |||||||| ||||||| || |||||||| | ||||||||  |||||| || ||| || |    
T  7732485 ttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaactat-atgt 7732582  T
Q  185 ttgttgcatttttcgtcctacct-cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| |||||| || ||||||||| ||||||| ||||||| | ||||||||||||||    
T  7732583 tttttgcagttttagtcctatctccctattttc-aactccataaacgcacataaatgacagtttta 7732647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 25637741 - 25637585
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| |    ||||| || | |||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| || ||| ||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttttgc 25637643  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | |||| |||||| ||||   |||| |||||||||||| || ||||||||||||||||    
T  25637642 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 25637585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 26026437 - 26026477
Alignment:
Q  208 cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  26026437 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 26026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 26048071 - 26048107
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  26048071 tttccaactccagaaacgcacagaaatgacagtttta 26048107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 28687922 - 28687886
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  28687922 tttccaactccagaaacgcacagaaatgacagtttta 28687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 35579344 - 35579273
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| ||| ||||| |||| ||| |||||||||||||| ||||| | |||||||| ||||| |||||||||    
T  35579344 tatcatgttttttgcagttttagtcatacctcctattttc-aactctaaaaacgcagggaaataacagtttta 35579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 3e-91; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 22219901 - 22219712
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22219802  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  22219801 tgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccctatgct 22219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 11445535 - 11445346
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 11445436  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  11445435 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccctatgct 11445346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 12935154 - 12935343
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccctatgct 12935343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 10899942 - 10900099
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 10900099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 20741650 - 20741460
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat---tt 184  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 20741460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 23075675 - 23075487
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||| || ||||||||||||||| ||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacccttatgct 23075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 18504922 - 18505105
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccctatgct 18505105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 31470314 - 31470501
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||| ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccctatgct 31470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 2319669 - 2319857
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||| || ||||| |  |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  2319769 tgttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 2319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 18257682 - 18257496
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    | |||||||||||||||||| ||||||| ||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccctatgct 18257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 90 - 269
Target Start/End: Original strand, 15827639 - 15827819
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| ||| |||||||||||| ||||||  |||||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacccc 15827819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 18257135 - 18257296
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 18257296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 20741098 - 20741259
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 20741259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 10900475 - 10900316
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 10900316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 11277127 - 11276968
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagtttta 11276968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 11276589 - 11276750
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||| ||| |||  |||||||||| ||| ||| ||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagtttta 11276750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 15828187 - 15828027
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  15828087 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 15828027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 31470860 - 31470702
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| | ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  31470760 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaatttta 31470702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 4811801 - 4811616
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||| ||||||| || ||||||||||||||| ||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||| || |||||||||||||||||| ||| ||||||||| ||||| || ||||| |  ||||||||||||||||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccctatgct 4811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 12935704 - 12935543
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||| |||||||||||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagtttta 12935543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 28472634 - 28472795
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 28472733  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  28472734 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 28472795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 29859823 - 29859984
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 29859922  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  29859923 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 29859984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 11444984 - 11445146
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttt 11445083  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||||  | ||||| |  ||| | |||| |||||||||||||||||||    
T  11445084 tgttgcatttttcgtcctaccctccatttt-attctctaaaaacacagagaaatgacagtttta 11445146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 1149977 - 1149817
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  189 tgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  |||| | ||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagtttta 1149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 2322760 - 2322605
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| |||  ||| |  ||||| |||| |||||||||||||||||||    
T  2322660 atttttcgtcctacc-cctcattttattctcca-aaacacagagaaatgacagtttta 2322605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||| || ||||| |  |||||  |||| ||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 23073998 - 23074096
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 4811372 - 4811531
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||   || |||||| ||| |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||||||||| |||| || ||||| |  || || ||||||||| |||| |||||||||    
T  4811472 ttcatttttcgtcttaccccccatttt-attcttcaaaaacgcagataaataacagtttta 4811531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 29033436 - 29033560
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  191 catttttcgtcctacctcctatttt 215  Q
    ||  |||| ||||||| || |||||    
T  29033536 cacatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 177  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 3835268 - 3835145
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||||||||||||   |||||||| |||| |||||||| ||||||||||  |||||||||||||||||  |||||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  192 atttttcgtcctacctcctatttt 215  Q
    ||||||||||||||| || |||||    
T  3835168 atttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||| ||||  |||||||||||||||||||||||  |||||| | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  191 catttttcgtcc 202  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 18296142 - 18296262
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||| | |||| ||| |||||||||| | || |||| ||| || |  |||||||||||||||||||||||| |||||||| ||||||||||    
T  18296142 ttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttt 18296241  T
Q  186 tgttgcatttttcgtcctacc 206  Q
    |||||||||||||||||||||    
T  18296242 tgttgcatttttcgtcctacc 18296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 35163639 - 35163573
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttc-aactccaaaaacacagagaaatgacagtttta 35163573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 1149558 - 1149614
Alignment:
Q  219 actccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||| |||||||||  |||||||| ||| |||||||||||||||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccctatgct 1149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 32836114 - 32836179
Alignment:
Q  202 ctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||  |  ||||||||||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 145  Q
    ||||||||||||||||||||| |||| ||||| || | |||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 31573817 - 31573884
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  31573817 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtttta 31573884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 250
Target Start/End: Original strand, 25468943 - 25469011
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagttttat 250  Q
    ||||| ||||| |||| |||||| |||| |||||| ||| |||||||||||| |||||||||||||||||    
T  25468943 tttttcttgcagttttagtcctatctccctatttt-aaattccagaaacgcacagaaatgacagttttat 25469011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 28473041 - 28472997
Alignment:
Q  231 cagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||| |||||||||||||| | |||||||||||||||| ||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacccatatgct 28472997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 28636619 - 28636583
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  28636619 tttccaactccagaaacgcacagaaatgacagtttta 28636583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 31073565 - 31073529
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  31073565 tttccaactccagaaacgcacagaaatgacagtttta 31073529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 33095782 - 33095842
Alignment:
Q  157 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttca 217  Q
    ||||||||| |||| | || |||||| ||| ||||| |||| |||||||||||||||||||    
T  33095782 gaacaaaaccgtccctaaactatcatgttttttgcagttttagtcctacctcctattttca 33095842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 15523233 - 15523421
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 15523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 22434179 - 22434365
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 22434365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 45082969 - 45082783
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 45082783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 20471062 - 20470870
Alignment:
Q  83 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 182  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  20471062 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcat 20470963  T
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  20470962 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatgct 20470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 46193405 - 46193591
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 46193591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 25447247 - 25447433
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacccatatgct 25447433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 23494991 - 23494802
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| | ||||||| || ||||| |||||||||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccctatgct 23494802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 12234874 - 12234688
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccctatgct 12234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 54995067 - 54995255
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| |||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacccttatgct 54995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 11153145 - 11153332
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 11153332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 25938217 - 25938030
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||||    
T  25938117 ttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 25938030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 51021342 - 51021155
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccctatgct 51021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 48526723 - 48526545
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccct 270  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 4220107 - 4219918
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttt 4220008  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  4220007 tgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccctatgct 4219918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 18751602 - 18751785
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccctatgct 18751785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 91 - 275
Target Start/End: Original strand, 2118295 - 2118480
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctac-ccctatgct 275  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||| |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctactccctatgct 2118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 12503453 - 12503622
Alignment:
Q  106 ggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 205  Q
    |||| |||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  206 ctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 12503622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 25447783 - 25447622
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||  | ||||| |  ||||| |||||||||||||| |||||||||    
T  25447683 gttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagtttta 25447622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 12234326 - 12234488
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  12234426 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 33109686 - 33109843
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||| |||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 33109843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 38962362 - 38962205
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  || || ||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttta 38962205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 11153692 - 11153533
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||  | ||||| |  ||||| |||||||||||||| |||||||||    
T  11153592 tgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagtttta 11153533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 25937667 - 25937829
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 25937766  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||| |||||  | || ||||| |  ||||| ||||||||||||||||||||||||    
T  25937767 tgttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagtttta 25937829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 46193948 - 46193791
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||| |||||||||||    
T  46193848 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagtttta 46193791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 15523780 - 15523620
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||| ||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagtttta 15523620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| || |||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  187 gttgcatttttcgtcctacctcctatttt 215  Q
    |||||||||||||||||||||||||||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 23494445 - 23494602
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| | ||||||||||||||||||||||    
T  23494545 catttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagtttta 23494602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 22434724 - 22434564
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttt 22434626  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  22434625 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 22434564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 51020794 - 51020956
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||||||||| || || |||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttt 51020893  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  || || ||||| ||||||||||||||||||    
T  51020894 tgttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagtttta 51020956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 48526195 - 48526354
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||  |||||||||| |||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagtttta 48526354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 22170482 - 22170323
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| |||| | |||||| || ||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 22170323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 2118837 - 2118682
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||| | |||||||    
T  2118737 atttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaataatagtttta 2118682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  186 tgttgcatttttcgtcct 203  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 45082429 - 45082589
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| |||||||| ||||||||| ||||||||||| ||| ||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||| ||||||||||||| |||||    
T  45082528 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatgacaatttta 45082589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 54995614 - 54995454
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| | || ||||| |  ||| | ||||||| |||||||| |||||||    
T  54995515 gttgcatttttcgtcctaacccccatttt-attctctaaaaacgcaaagaaatgatagtttta 54995454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 20958403 - 20958288
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||| ||||||||    
T  20958303 gcattttt-gtcctacc 20958288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||| |||| ||||| |||| | |||||||||||| |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  188 ttgcatttttcgtcctacc 206  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 48708293 - 48708401
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||||   |||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  187 gttgcattt 195  Q
    |||||||||    
T  48708393 gttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 217
Target Start/End: Complemental strand, 10258433 - 10258304
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||  ||||  ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  188 ttgcatttttcgtcctacctcctattttca 217  Q
    ||||| |||| ||| |||| ||||||||||    
T  10258333 ttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 44892692 - 44892576
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||| | |||||||| |||||||||| |||| |||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  44892592 gcatttttcgtcctacc 44892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 43243803 - 43243708
Alignment:
Q  111 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 206  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||||||||    
T  43243803 tcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 48293592 - 48293708
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||| || ||||| |  ||||||||| |||||||  || |||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  187 gttgcatttttcgtcct 203  Q
    |||||||||||| ||||    
T  48293692 gttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 203
Target Start/End: Complemental strand, 48713893 - 48713777
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| ||||||||||||||  |  ||||||||| ||||| ||| |||| ||||| ||| |||||||||||||||||||  ||||||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  187 gttgcatttttcgtcct 203  Q
    |||||||||||||||||    
T  48713793 gttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 16690939 - 16691062
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||| |||||||| | ||||||||  ||| |||||||| ||||||||||  ||||||||| |||||||   ||||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  192 atttttcgtcctacctcctatttt 215  Q
    ||||||||||||||| || |||||    
T  16691039 atttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 44890518 - 44890643
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||   ||||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  190 gcatttttcgtcctacctcctatttt 215  Q
    ||||||||| || |||| || |||||    
T  44890618 gcatttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 43281313 - 43281210
Alignment:
Q  111 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcct 210  Q
    ||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||  || |||||||||| |||||||||||||||||||||||||| ||     
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacccccc 43281215  T
Q  211 atttt 215  Q
    |||||    
T  43281214 atttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 48295088 - 48294961
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||| |||||||| ||||||||||  ||| |||||||| ||||| ||||  ||||||||| |||||||  ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  189 tgcattttt-cgtcctacctcctatttt 215  Q
    ||||||||| ||||||||| || |||||    
T  48294988 tgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 12503913 - 12503822
Alignment:
Q  157 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 12503822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  147 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 215  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaa 159  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| ||   |||||||| |||| |||||||| ||||||||||  |||||| || |||||||  |||||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    ||||||||||||| ||||||| |||||    
T  16691517 tgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  96 ttacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 195  Q
    ||||| |||||||| ||| |||||||| || |||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  196 ttcgtc 201  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 249
Target Start/End: Original strand, 17503964 - 17504132
Alignment:
Q  79 attaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 178  Q
    |||||| | ||||||||||| ||| |||||| |||  ||||| ||   |||||||| ||||||||||  ||| |||  ||||| ||| |||||  || ||    
T  17503964 attaaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aacta 17504062  T
Q  179 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||| ||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17504063 tcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagtttta 17504132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||| | ||||| || |||||||||| ||||||||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  189 tgcattttt 197  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 17504437 - 17504346
Alignment:
Q  157 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| || ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  17504437 gaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagtttta 17504346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 35193406 - 35193466
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagtttta 35193466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 44220861 - 44220805
Alignment:
Q  150 taaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacc 206  Q
    |||||||||||||||  |||||||| |||||||||||||| |||||||||| |||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 229702 - 229546
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||||||  ||||| ||   |||||||| ||||| |||| |||| ||| || |||||||  |||||| || |||||| ||| |||    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatca-aacaaaatcgtccttaaactatcatgttt-ttg 229605  T
Q  191 catttttcgtcctacctcct-attttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||  ||||||||||| |||||||| ||||||||||||| |||| ||||| |||||    
T  229604 cagttttaatcctacctccttattttcaa-ctccagaaacgcacagaagtgacaatttta 229546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 262
Target Start/End: Complemental strand, 40160633 - 40160465
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||| |||||||| | |  ||||| || | |||||||| | ||| ||||  ||| |||  ||||||||| |||||  || |||||| ||| ||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtccta-aactatcatgttttttgc 40160535  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagac 262  Q
    | |||| ||| |||||||||||||| ||||||||||||| |||||||   |||||||| || |||||||||    
T  40160534 agttttagtcttacctcctattttc-aactccagaaacgtagagaaaatgcagttttaggcagttttagac 40160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 34789382 - 34789541
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |    ||||| || | |||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| || ||| |    
T  34789382 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgttttt 34789480  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| |||| |||||| ||||   |||||||||||||||||||| | |||||||| |||||    
T  34789481 tgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaatttta 34789541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 30598065 - 30597940
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||| ||||||||||||||| |||||||||| || | ||||| || |||| ||| | |||||||| | ||||||||  |||| | |||||| |||||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  188 ttgcatttttcgtcctacctcctatttt 215  Q
    ||||| |||| |||||| | ||||||||    
T  30597967 ttgcacttttggtcctaacccctatttt 30597940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 10795730 - 10795692
Alignment:
Q  231 cagagaaatgacagttttatgcggttttagacctacccc 269  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacccc 10795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 12593023 - 12593183
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |     |||| || | |||||||| ||||| | || |||| |||  ||||||||  |||||| || ||| || |||     
T  12593023 aggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactat-atgtttt 12593121  T
Q  188 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||  ||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  12593122 ttgcaattttaatcctatctccctattttcaa-ctccagaaacgcacagaaatgacagtttta 12593183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 249
Target Start/End: Complemental strand, 24336271 - 24336150
Alignment:
Q  127 tcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccaga 226  Q
    |||||||| ||||||||||  ||| |||  ||||||||| || | | ||||||||| ||| ||||  |||| |||||||| | ||||||||| |||||||    
T  24336271 tcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgctcttttagtcctaccccatattttcaa-ctccaga 24336173  T
Q  227 aacgcagagaaatgacagtttta 249  Q
    |||| | ||||||| ||| ||||    
T  24336172 aacgtatagaaatggcagcttta 24336150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 35193744 - 35193672
Alignment:
Q  194 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    |||| ||| |||||||||||||||| |||||||||||||||| |||| |||||||| || |||  ||||||||||    
T  35193744 ttttagtcatacctcctattttcaa-ctccagaaacgcagag-aatggcagttttaagcagttacagacctaccc 35193672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 14439926 - 14439987
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  14439926 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 14439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 46736774 - 46736814
Alignment:
Q  208 cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  46736774 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 46736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 26974407 - 26974443
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  26974407 tttccaactccagaaacgcacagaaatgacagtttta 26974443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 34789932 - 34789769
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||| ||||||||||||||||||| | |  ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | || |||   ||    
T  34789932 ttagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaattgtccctaaactatatgtt 34789834  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| |||||| ||||   |||| ||||||| ||||||| | ||||||||||||||    
T  34789833 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagtttta 34789769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 45838970 - 45838934
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  45838970 tttccaactccagaaacgcacagaaatgacagtttta 45838934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 13225185 - 13224998
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 13224998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 19176287 - 19176476
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccatatgct 19176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 41681679 - 41681493
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccctatgct 41681493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 9928912 - 9929095
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacccttatgct 9929095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 44831246 - 44831433
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccctatgct 44831433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 90 - 275
Target Start/End: Complemental strand, 31133764 - 31133579
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagacctatctctatgct 31133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 11657003 - 11656816
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| || ||||||||||||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccctatgct 11656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 92 - 275
Target Start/End: Complemental strand, 12572393 - 12572210
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccctatgct 12572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 33742919 - 33743107
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcatttt 33743017  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    || ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  33743018 tgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 33743107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 91 - 275
Target Start/End: Complemental strand, 33328683 - 33328499
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||| |||||||||| ||||||||| ||||| |||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccctatgct 33328499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 34541096 - 34540934
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttt 34540997  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 248  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  34540996 tgttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 41681132 - 41681292
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  41681232 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 19176838 - 19176676
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176739  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  19176738 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagtttta 19176676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||| |||||||  |  |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacag 244  Q
     |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 12571855 - 12572023
Alignment:
Q  81 taaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc 180  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  12571855 taaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatc 12571954  T
Q  181 atttttgttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||||||| || || ||||| |  ||||| ||||||||||||||||||||||||    
T  12571955 atttttgttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 12572023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 11656452 - 11656615
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttt 11656551  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactcc-agaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  |||| | ||||||||||||||| ||||||||    
T  11656552 tgttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagtttta 11656615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 93 - 249
Target Start/End: Original strand, 13224645 - 13224799
Alignment:
Q  93 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 192  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  193 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 13224799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 82 - 249
Target Start/End: Original strand, 31133213 - 31133379
Alignment:
Q  82 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 181  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||    
T  31133213 aaacataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatca 31133312  T
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  31133313 tttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 31133379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 9930203 - 9930043
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| || ||||||||||||| |||||||    
T  9930103 ttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagtttta 9930043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 33328161 - 33328317
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||  | ||||| |  ||||| ||||||| ||||||||||||||||    
T  33328261 atttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagtttta 33328317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 249
Target Start/End: Complemental strand, 44831799 - 44831631
Alignment:
Q  80 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 179  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  44831799 ttaaaattaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattat 44831700  T
Q  180 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| |||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  44831699 catttttgttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 44831631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 9178180 - 9178022
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||| || |||| || ||||| |  ||| | |||||||||||||||||| |||||    
T  9178080 tgcatttttcatcttacc-cccatttt-attctcaaaaaacgcagagaaatgacaatttta 9178022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  187 gttgcattttt 197  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 9177724 - 9177818
Alignment:
Q  181 atttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccctatgct 9177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 33743417 - 33743305
Alignment:
Q  136 tggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagag 235  Q
    |||| ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||| |  ||||| ||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagag 33743319  T
Q  236 aaatgacagtttta 249  Q
    |||| |||||||||    
T  33743318 aaataacagtttta 33743305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 4630328 - 4630178
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| |||||||||  ||||||||||||| | ||||||||||||||||      |||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  4630234 atttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagtttta 4630178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 8074097 - 8073985
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| || || || ||||||||||||||||||||   |||||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  188 ttgcatttttcgtc 201  Q
    ||||||||| ||||    
T  8073998 ttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 215
Target Start/End: Original strand, 10918123 - 10918252
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| ||||||||| |||| ||| ||||||||||  ||| |||||||| ||||| ||||   |||||||||| |||||  ||||||||| |||||||||    
T  10918123 ttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttt 10918222  T
Q  186 tgttgcatttttcgtcctacctcctatttt 215  Q
    ||||||||||||| || |||| || |||||    
T  10918223 tgttgcatttttcatcataccccccatttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 35427361 - 35427199
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||  ||||| || | |||||||| |||| || ||  ||| |||| ||||||||  |||| | |||||| || ||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atatt 35427263  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||| | ||||   |||| ||||||| ||||||| ||||||||||||||||    
T  35427262 ttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagtttta 35427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 43958264 - 43958311
Alignment:
Q  168 tccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 215  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctatttt 43958311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 18805267 - 18805321
Alignment:
Q  194 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagtttta 18805321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 249
Target Start/End: Complemental strand, 28254971 - 28254813
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||| | |  ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| ||  || |    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-ataatttt 28254874  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  28254873 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28254813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggc 122  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 18049684 - 18049750
Alignment:
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  18049684 tttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 18049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 43958206 - 43958254
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 134  Q
    |||| |||||||| |||||||||||||||||||||  ||| ||||||||    
T  43958206 ttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 83 - 273
Target Start/End: Complemental strand, 2218 - 2028
Alignment:
Q  83 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 182  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2218 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 2119  T
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  2118 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccctatg 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 1665 - 1826
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 37727475 - 37727289
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 37727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 17464488 - 17464677
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccctatgct 17464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 43973988 - 43973799
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 43973889  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  43973888 tgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 43973799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 4275911 - 4275723
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 4275723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 88 - 268
Target Start/End: Original strand, 39555577 - 39555757
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 31778652 - 31778839
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccgtatgct 31778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 20841107 - 20840920
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||  ||||||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccctatgct 20840920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 27393660 - 27393847
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccctatgct 27393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 25853234 - 25853420
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccctatgct 25853420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 5137529 - 5137340
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccccatgct 5137340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 22424811 - 22425000
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||  ||||||||  ||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttt 22424910  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  22424911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 22425000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 29801964 - 29801775
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29801964 ttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29801865  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||    
T  29801864 tgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacctctatgct 29801775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 23645010 - 23644823
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacct-acccctatgct 275  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagacctaacccctatgct 23644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 24300560 - 24300742
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24300560 ttaattacatttttggtct-cgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 24300742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 32534962 - 32535145
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| |||||||||||| || |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttataccttcccctatgct 32535145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 88 - 273
Target Start/End: Complemental strand, 30098309 - 30098121
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttag---acctacccctatg 273  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||   |||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttagatcacctacccctatg 30098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 87 - 267
Target Start/End: Original strand, 26837358 - 26837538
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| ||||||||| |||||||| | || |||||||||| |||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 92 - 273
Target Start/End: Complemental strand, 41047239 - 41047060
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||||||| | ||||| |||||||||||| ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccatatg 41047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 26274570 - 26274753
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||| ||||| || | || |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| || |||||||||||||  |||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctacgtctatgct 26274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 31779199 - 31779038
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| ||| || ||||| |  ||||| ||||||||||||||| ||||||||    
T  31779099 gttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagtttta 31779038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 20840556 - 20840719
Alignment:
Q  85 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  20840556 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcattt 20840655  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||||| || ||||| |  ||||  ||||||||||||||||||||||||    
T  20840656 ttgttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagtttta 20840719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 39556122 - 39555963
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 39555963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 86 - 245
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagt 245  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||    
T  48453086 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 41046703 - 41046859
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 41046859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 5136978 - 5137139
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 5137139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 24301104 - 24300942
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||| | |||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttt 24301005  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  24301004 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 24300942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 37726928 - 37727088
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||| ||  | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 37727088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 23644461 - 23644621
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| |||||||||||||| | |||||||    
T  23644561 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagtttta 23644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 32535508 - 32535345
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc-----att 183  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  184 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||    
T  32535408 tttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgatagtttta 32535345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 27394123 - 27393963
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||| | ||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  27394023 ttgcattttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagtttta 27393963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 43973441 - 43973600
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||| || |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||| |||| |||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagtttta 43973600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 30104479 - 30104640
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttt 30104578  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |   || | ||||||||||||||||||||||||    
T  30104579 tgttgcatttttcgtcctacc-cccatttt-attatctaaaaacgcagagaaatgacagtttta 30104640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  189 tgcatttttcgtcctacc 206  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 26837903 - 26837742
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||| ||||||| |||||||||||||| ||||| |||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcatttt 26837805  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  26837804 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 26837742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  93 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 192  Q
    ||||||||||||||||| |||||||| |||||| ||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  193 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 239  Q
    |||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 25853770 - 25853613
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||||||||| || ||||||||||  ||| |||||||||||||| || | |||||||||||||||||| |||||||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 25853613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 25612519 - 25612396
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  192 atttttcgtcctacctcctatttt 215  Q
    ||||||||||||||| || |||||    
T  25612419 atttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 17465038 - 17464877
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||||| |||||||| |||||||||||||||  || ||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  188 ttgcat-ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| |||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  17464938 ttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 17464877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 26275114 - 26274953
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| ||||||| | |||||| | | |||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  26275114 ttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttt 26275015  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| |||||||||||||| || ||||| |  ||||| || |||||||||||||||||||||    
T  26275014 tgttgc-tttttcgtcctaccccccatttt-attctccaaaaccgcagagaaatgacagtttta 26274953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||||||  |||||||||||||| |||||||| || || |||||||||||||| ||||||||  |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    ||||||||||||||||||||| |||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  190 gcatttttcgtcct 203  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 51474882 - 51474753
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||   ||||||||||| || |||||||| ||||| ||||||||||||||| |||||||  |||||| | ||||||||||    
T  51474882 ttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttt 51474783  T
Q  186 tgttgcatttttcgtcctacctcctatttt 215  Q
    ||||||||||||||||||||| || |||||    
T  51474782 tgttgcatttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 50116954 - 50116828
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| ||| |||||||||||||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    |||| ||||||||||||| || |||||    
T  50116854 tgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 32697244 - 32697128
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||| | |||||||| ||||||||| ||||| |||||||| | |||  ||||||||||||||||||||||  || ||||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  32697144 gcatttttcgtcctacc 32697128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 45965936 - 45966049
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||  |  |||||| ||||||||||| |||||||  ||||||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  187 gttgcatttttcgt 200  Q
    ||||||||||||||    
T  45966036 gttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 37220555 - 37220674
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||| |||||||||| |||| | |  | || ||| |||||||||||||| ||||  |||||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  187 gttgcatttttcgtcctacc 206  Q
    |||||| |||||||||||||    
T  37220655 gttgcacttttcgtcctacc 37220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 25420684 - 25420560
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||||||||| || |||| ||||| |||| |||||||| || ||  |||||||||||| |||| ||||  ||||||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  191 catttttcgtcctacctcctatttt 215  Q
    ||||||||||| |||| || |||||    
T  25420584 catttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 175  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||| |||||||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 25419145 - 25419242
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcattttt 186  Q
    |||| |||| |||||||||||||||||||| || || |||||||| | || ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 18010265 - 18010176
Alignment:
Q  114 tgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcct 203  Q
    |||||| | ||| |||||||| |||| | ||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||    
T  18010265 tgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 27200240 - 27200079
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| | |  ||||| ||   |||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggttta 27200079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 37075687 - 37075847
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca--ttttt 186  Q
    ||||||||||||||||||||| ||  ||||| || | |||||||| |||||||||| |||| ||| || |||||| | |||| | || |||    |||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatca-aacaaacccgtccctaaactatatgtttttt 37075785  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  37075786 tttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgtttta 37075847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 55192222 - 55192276
Alignment:
Q  194 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagtttta 55192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 8873784 - 8873869
Alignment:
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 269  Q
    |||| ||||| |||| ||| |||||||||||||||| || ||||||||||||||||||||||||||| ||  |||| ||||||||||    
T  8873784 tttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacccc 8873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 2323466 - 2323553
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagaccta 265  Q
    |||||| ||| ||||| |||| |||||||||||||||||| |||||||||||| | || |||||||||||||| ||  |||||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 49407793 - 49407954
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||  ||||| ||   |||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | |   |||    
T  49407793 ttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttt 49407892  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||  || |||| ||| |||||||||||||||| ||||| |||||||||||||||||| |||||    
T  49407893 tgta-cagttttagtcatacctcctattttcaa-ctccaaaaacgcagagaaatgacaatttta 49407954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 51827956 - 51828116
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct-gcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||| | |  ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| || |||    
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  187 gttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     |||||||||| |||||| |||| ||||||||| ||||||||||||| | ||||||||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaa-ctccagaaacgcacataaatgacagtttta 51828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 50900637 - 50900710
Alignment:
Q  194 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    |||| ||||||||| |||||||||| ||| ||||||  |||||||||||||||||| || |||||||||||||||    
T  50900637 ttttagtcctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctaccc 50900710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 55389603 - 55389764
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||| ||||||||||||||||| ||   ||| | || | |||||||| ||||||| || |||| |||  ||||||||  |||||| || ||| || |||    
T  55389603 taggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttt 55389701  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  55389702 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 55389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 22370599 - 22370756
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| |||  ||||| || | |||||||| ||||||| || |||| ||||  |||||||  |||| | || |||   |||| ||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | |||| |||||| |||||  | || ||||||||||||||| |||||| |||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagtttta 22370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 23227261 - 23227370
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||| ||||| |||||||||||  |||||||||| || |||||||| |||||||       | ||||||||||||   ||||| ||||| |||||||||    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  188 ttgcatttttcgtcct 203  Q
    ||||||||||||||||    
T  23227355 ttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 52237366 - 52237204
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||| ||||||||||||||||||| ||   ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | |||||| || |    
T  52237366 ttagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaattat-atgt 52237269  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| |||||| ||||   |||| |||||| |||||||| ||||||||||||||||    
T  52237268 tttttgcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagtttta 52237204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||| |||||||| || | |||||||||| | |||||| || |  || | ||||||||||||||||||  ||||| | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  192 atttttcgtcct 203  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 36701645 - 36701483
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||| ||||||||||||||||||| |||  ||||| ||   |||||||| ||||| || |  ||| |||  ||||||||   ||| | || |||||| ||    
T  36701645 ttagacttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgtt 36701546  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| ||| |||||||||||||| |||||||||||| || ||||||| ||||||||    
T  36701545 ttttgcagttttagtcatacctcctattttc-aactccagaaacacatagaaatggcagtttta 36701483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 50901076 - 50900915
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||  ||||| ||   |||| ||| ||| ||||||  ||  |||  ||||||||| |||| | || ||| || ||    
T  50901076 ttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgtt 50900978  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||||||||||||||||| ||||||| ||||||| ||||||  ||||||||    
T  50900977 ttttgcagtttttgtcctacctcctattttc-aactccataaacgcaaagaaattgcagtttta 50900915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 55390146 - 55389984
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||  ||||  || |||||||||| ||||||| || |||| |||   |||||||  |||  | || ||| || ||    
T  55390146 ttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactat-atgtt 55390048  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||| | |||| |||||||||||   |||| ||||||| ||||||| ||||||||||||||||    
T  55390047 ttttgtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagtttta 55389984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 32730812 - 32730776
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32730812 tttcaaactccagaaacgcacagaaatgacagtttta 32730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 52375880 - 52375718
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||  ||||| || | |||||||| ||||||| ||  ||| |||  ||||||||  |||| | || ||| || ||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat-atgtt 52375782  T
Q  186 tgttgcatttttcgtcctac-ctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| ||| ||  | ||||||| ||| ||||||||||||| ||||||||||||||||    
T  52375781 ttttgcagttttagtcatattcccctatttccaa-ctccagaaacgcacagaaatgacagtttta 52375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 8874138 - 8874073
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| || |||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  8874138 ttttttttgcagttttagttctaccttctattttcaa-ctccagaaacgca-agaaatgacagtttta 8874073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 40275187 - 40275254
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  40275187 ttttttttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagtttta 40275254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 47431694 - 47431856
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||||||||||| |    ||||| || | |||||||| ||||| | || |||||||| | ||||||||  ||| || || |||   |||    
T  47431694 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatc-gaacaaaatcgtctttaaactatatgttt 47431792  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  47431793 ttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 47431856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 49720369 - 49720530
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||| || | |  ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | || |||   |||    
T  49720369 taggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccctaaagtatacgttt 49720467  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||||| |||||  |||| ||||||||||||||| | ||||||||||||||    
T  49720468 t-ttgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagtttta 49720530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 43222842 - 43222776
Alignment:
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||| |||| |||| ||| ||||||||  ||||||||||||||| | ||||||||||||||    
T  43222842 tttttttgcagttttagtcccaccccctatttttcaactccagaaacgcacaaaaatgacagtttta 43222776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 50662860 - 50662799
Alignment:
Q  188 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  50662860 ttgcagttttagtcctagctccctattttcaa-ctccagaaacgcacagaaatgacagtttta 50662799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 51828410 - 51828344
Alignment:
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  51828410 tttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagtttta 51828344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 14654639 - 14654578
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| |||||  |||| ||||||||||||||| | ||||||||||||||    
T  14654639 ttgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagtttta 14654578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 37847267 - 37847207
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||||||||||| || |||||| |||||||||||||| |||||    
T  37847267 ttgcagttttagtcctatctcctattttcaa-cttcagaaatgcagagaaatgacaatttta 37847207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 40839100 - 40839039
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  40839100 ttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 40839039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 43222488 - 43222549
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||  ||||||| ||||||||  ||||||||||||| | | ||||||||||||||    
T  43222488 ttgcatttttaatcctaccccctatttttcaactccagaaacgtacaaaaatgacagtttta 43222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 52236935 - 52236975
Alignment:
Q  208 cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  52236935 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 52236975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 36701224 - 36701267
Alignment:
Q  205 cctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||    
T  36701224 cctcctattttcaa-ctccagaaacgcagataaatgacaatttta 36701267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 40838775 - 40838811
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  40838775 tttccaactccagaaacgcacagaaatgacagtttta 40838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 52375450 - 52375486
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  52375450 tttctaactccagaaacgcatagaaatgacagtttta 52375486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 3e-88; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 5818927 - 5819115
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 5819115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 19359683 - 19359495
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccctatgct 19359495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 8647986 - 8647797
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 8647887  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8647886 tgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 8647797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 8461477 - 8461290
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 8461290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 164191 - 164376
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccctatgct 164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 18182968 - 18183156
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccctatgct 18183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 24331556 - 24331747
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--tt 183  Q
    |||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattt 24331655  T
Q  184 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24331656 tttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 24331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 91 - 273
Target Start/End: Original strand, 14215243 - 14215425
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||  | ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatg 14215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 91 - 275
Target Start/End: Original strand, 2864756 - 2864940
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccctatgct 2864940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 29454739 - 29454926
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacccatatgct 29454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 25000635 - 25000448
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||  ||||||||||||||||||| |||| |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 25000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 16019134 - 16018946
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| || ||||||||| || |||||||| ||||||||| ||||||||| |||| |||| ||| |||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccctatgct 16018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 15709513 - 15709335
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| | ||||||||||||| ||| |||||| ||| |||||||| |||||||||||||||||||||| | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 18183517 - 18183355
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18183418  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| |||  ||| |  ||||| |||||||||||||| |||||||||    
T  18183417 tgttgcatttttcgtcctacc-cctcattttattctccaaaaacgcagagaaataacagtttta 18183355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 2865302 - 2865141
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||| |||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 2865141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 5819474 - 5819315
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||| ||||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagtttta 5819315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 8647438 - 8647597
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 8647597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 24362383 - 24362222
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 24362222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 19359136 - 19359292
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 246  Q
    |||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 91 - 275
Target Start/End: Original strand, 15371873 - 15372060
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    |||||||||||||||| || |||| |||||| ||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttat----gcggttttagacctacccctatgct 275  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||     ||||||||||||||||| |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacctctatgct 15372060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 29455288 - 29455128
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  29455188 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 29455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 15372421 - 15372259
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 15372322  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||| || |||| ||| ||||| |   |||| ||||||||||||||||||||||||    
T  15372321 tgttgcattttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagtttta 15372259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 15708968 - 15709129
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 15709067  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||| |||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  15709068 tgttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 15709129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 8460928 - 8461089
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagtttta 8461089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 95 - 275
Target Start/End: Original strand, 24361843 - 24362022
Alignment:
Q  95 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 194  Q
    |||||||||||||||  | ||||||||||||  |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  195 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccctatgct 24362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 85 - 249
Target Start/End: Complemental strand, 14215792 - 14215629
Alignment:
Q  85 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  14215792 cttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 14215693  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||| || | || ||||| |  ||||| ||||| ||||||||||||||||||    
T  14215692 ttgttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagtttta 14215629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 275
Target Start/End: Original strand, 24325218 - 24325397
Alignment:
Q  95 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 194  Q
    |||||||||||||||  | ||||||||||||  |||||||||| || ||||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  195 tttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccctatgct 24325397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 164739 - 164577
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||| | ||||| || || |||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  164739 ttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 164640  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||| |||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  164639 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagtttta 164577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 14464067 - 14463907
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||  |  || |||||||||| ||||||||||| |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaatttt-attctccaaaaacgcagagaaatgacagtttta 14463907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 16018588 - 16018705
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  188 ttgcatttttcgtcctacc 206  Q
    ||||||||| |||||||||    
T  16018687 ttgcattttccgtcctacc 16018705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 7349562 - 7349436
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||||  ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    |||| ||||| ||||||| || |||||    
T  7349462 tgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 4222266 - 4222150
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  190 gcatttttcgtcctacc 206  Q
    |||||||||||||||||    
T  4222166 gcatttttcgtcctacc 4222150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 24332107 - 24331946
Alignment:
Q  91 cttaattacactttt-ggtcttcgtgttttggcctattcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcat-ttttg 187  Q
    ||||||||||||||| |||| || ||||||||| || ||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||| |||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  188 ttgca-tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||||||||||||| || ||| | |  ||||| ||||||||||||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattct-attctccaaaaacgcagagaaatgacagtttta 24331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||||  |||||||||||||||||  |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  189 tgcatttttcgtcctacc 206  Q
     ||||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||| |||||||| || |||||| | ||| |||||||| ||||| ||||||||||||||||||||||||  ||||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    |||| ||||||||||||| || |||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 111 - 249
Target Start/End: Original strand, 25000112 - 25000249
Alignment:
Q  111 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcct 210  Q
    ||||||||||||||| |||||||  ||||| |||||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||| |||||||| ||     
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  211 attttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |  ||||| ||||| ||||||||||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagtttta 25000249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 4219663 - 4219780
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || ||||||||||| ||||| || ||| ||||| |||| |||||||||||||||||   |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  189 tgcatttttcgtcctacc 206  Q
    ||||||||||||||||||    
T  4219763 tgcatttttcgtcctacc 4219780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 6019309 - 6019189
Alignment:
Q  95 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat- 193  Q
    |||||| |||||||| || ||||||||| || ||||||||||| || ||| |||||||||||||||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  194 ttttcgtcctacctcctatttt 215  Q
    |||||||||||||||| |||||    
T  6019210 ttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 14462686 - 14462768
Alignment:
Q  171 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactc----cagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||| ||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagtttta 14462768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 6018315 - 6018441
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||||| |||||||  ||||||||||  ||| |||||||||||||| || ||||||||||||||||||||   | ||||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  190 gcatttttcgtcctacctcctattttca 217  Q
    ||| |||| ||||||||  |||||||||    
T  6018414 gcagttttagtcctaccctctattttca 6018441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 10721873 - 10721967
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctat 272  Q
    |||||| ||| ||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccctat 10721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 27307148 - 27307238
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    |||||| ||| ||||| |||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||    
T  27307148 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 275
Target Start/End: Original strand, 28494845 - 28495029
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| |    ||||| ||  |||| |||| |||| |||||  ||| |||  ||||||||| |||||  || |||||| ||| ||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtccta-aactatcatgtttttt 28494943  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacc-cctatgct 275  Q
    ||| |||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||| |  |||||||||||||| ||||||||    
T  28494944 gcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctaccacctatgct 28495029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 41834606 - 41834446
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 186  Q
    |||||||||||||||||||||| |||  ||||| ||   |||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| ||||    
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  41834507 tttgcagttttagtcctacctcctattttc-aactcttgaaacgcagagaaatgacagtttta 41834446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 4624757 - 4624644
Alignment:
Q  102 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 201  Q
    |||| ||| |||||||||  |||| |||||||| ||||| || |  ||||||||| ||||||||  || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  202 ctacctcctatttt 215  Q
    ||||| || |||||    
T  4624657 ctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 28290192 - 28290031
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |    ||||| || | |||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| || |||    
T  28290192 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgttt 28290094  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  28290093 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 28290031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 28495288 - 28495228
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaa-ctccagaaccgcagagaaatgatagtttta 28495228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 32305916 - 32305976
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  32305916 ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagtttta 32305976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 268
Target Start/End: Complemental strand, 16753114 - 16752938
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat--ttttgt 188  Q
    |||||||||| |||||||| |||  ||||| || | |||||||| |||| |||||  ||| |||  |||| ||||  ||||  |||||||||  |||| |    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaaccatccta-aattatcatgttttttt 16753016  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    |||| |||| | |||| ||||||||||||| ||||||||||||||| ||||| |||||||| || | |||||||||||||    
T  16753015 tgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcag-tttagacctaccc 16752938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 13814226 - 13814155
Alignment:
Q  140 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttgttgcatttttcgtcctacc 206  Q
    |||||||||||||| ||||||||||| ||| |     ||||||||||||||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctacc 13814155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 27307499 - 27307445
Alignment:
Q  194 ttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacattttta 27307445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 13557079 - 13557176
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||| ||| ||||| |||| ||||||| || |||||| || || |||||||||||||||||  || ||| |||| |||||||||||||| |||||||    
T  13557079 tatcatgttttttgcagttttagtcctacatcttattttgaa-ctgcagaaacgcagagaaattgcaatttgatgccgttttagacctacctctatgct 13557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 15029857 - 15029696
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||   ||||| || | |||||||| ||||| | || |||| |||  ||||||||  |||||| || ||| || |||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat-atgttt 15029759  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| || | | ||||   |||||||||||||||||||| | ||||||||||||||    
T  15029758 tttgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagtttta 15029696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 22651347 - 22651504
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||| |||||||  |||| ||||| ||   ||||| || ||||| |||| |||||||| || ||||||||  ||||| || |||||| ||| ||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatca-aacaaaaccatccttaaactatcatgttt-tt 22651444  T
Q  190 gcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||| |||| ||||||||||| ||||||| ||||||||||||||| | ||||| ||||||||    
T  22651445 gcagttttagtcctacctccttattttc-aactccagaaacgcacaaaaatggcagtttta 22651504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 16752680 - 16752740
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| ||| |||||||||||||| ||||||| ||||||| |||||||| |||||||    
T  16752680 ttgcagtttttgtcatacctcctattttc-aactccataaacgcaaagaaatgatagtttta 16752740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 28289807 - 28289843
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  28289807 tttccaactccagaaacgcacagaaatgacagtttta 28289843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 18450829 - 18451016
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 18451016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 82 - 275
Target Start/End: Original strand, 40815338 - 40815531
Alignment:
Q  82 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 181  Q
    |||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  40815338 aaactttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatca 40815437  T
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40815438 tttttgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 40815531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 22374872 - 22374684
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccctatgct 22374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 43058880 - 43058692
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  43058880 ttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcatttt 43058781  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  43058780 -gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccctatgct 43058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 86 - 276
Target Start/End: Complemental strand, 7446894 - 7446704
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||||| ||||| || |||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 7446795  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgctt 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | |||||||    
T  7446794 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctactcatatgctt 7446704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 11091067 - 11090879
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacccatatgct 11090879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 28617160 - 28616973
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccctatgct 28616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 92 - 273
Target Start/End: Complemental strand, 40027682 - 40027501
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 273  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||||||| ||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacccatatg 40027501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 1978656 - 1978468
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||| |||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||||| |||||||    
T  1978556 gttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacctctatgct 1978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 90 - 275
Target Start/End: Complemental strand, 239896 - 239711
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaactctatgct 239711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 26538627 - 26538464
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttt 26538528  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  26538527 tgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagtttta 26538464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 3026006 - 3025822
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||| |||||||| |||||||||||| || |||||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacccatatgct 3025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 92 - 268
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| | ||||||||||||| |||||||| ||||| | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 14432689 - 14432500
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||| |||||||||| |||| ||||||||||||| |||| ||| |||||||||| |||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttt 14432590  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| ||||||    
T  14432589 tgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacccttatgct 14432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 239350 - 239511
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  239449 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 239511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 11090519 - 11090680
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 11090680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 22374318 - 22374479
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||| |||||||    
T  22374418 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagtttta 22374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 40027139 - 40027299
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||| ||||||||  | ||||| |  ||||| ||||||||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagtttta 40027299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 40815893 - 40815731
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttt 40815794  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  40815793 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 40815731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 18451379 - 18451217
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttt 18451280  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||| ||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  18451279 tgttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 18451217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 1978106 - 1978267
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| |||||  | || ||||| |  ||||| ||||||||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagtttta 1978267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 26538096 - 26538256
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| |||| ||||||||| |||||||||    
T  26538196 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagtttta 26538256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 28616613 - 28616739
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    |||| ||||||||||||| || |||||    
T  28616713 tgcaattttcgtcctaccccccatttt 28616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 43058333 - 43058492
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||| ||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 43058492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 20444748 - 20444875
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  188 ttgcatttttcgtcctacctcctatttt 215  Q
    ||||| ||||||||||||| || |||||    
T  20444848 ttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 14432145 - 14432301
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| |||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 14432301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  187 gttgcatttttcgtcctacct 207  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 3025463 - 3025624
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| || |||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||| | ||||||| ||||||||||||||||    
T  3025563 tgttgcatttttcgtcctacc-cccatttt-attctcaaaaaacgcaaagaaatgacagtttta 3025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 20440579 - 20440461
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttt 20440480  T
Q  186 tgttgcatttttcgtccta 204  Q
    ||||||| |||||||||||    
T  20440479 tgttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 8425902 - 8425746
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||  | ||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagtttta 8425746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 88 - 246
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||| || ||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 246  Q
    |||||||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||    
T  7446441 ttgcatttttcgtcatacc-cccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  190 gcatttttcgtccta 204  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 215
Target Start/End: Original strand, 35779708 - 35779834
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  189 tgcatttttcgtcctacctcctatttt 215  Q
    ||||||||| |||||||| || |||||    
T  35779808 tgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |||||||||||| |  |||||||| ||||| |||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  191 catttttcgtcctacctcctatttt 215  Q
    |||||||||| ||||| ||||||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |||||||||||  || |||||||| ||||| |||| |||||||||| |||||||  |||||||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  191 catttttcgtcc 202  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 15552596 - 15552482
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| || ||| ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  191 catttttcgtcctacc 206  Q
     |||||||||||||||    
T  15552497 tatttttcgtcctacc 15552482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 16194986 - 16195057
Alignment:
Q  17 atatataaatgaaacccaatttagttaaggaagaccaggtatttcatgtaagtgtaacatgtattaaactta 88  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16194986 atatataaatgaaacccaatttagttaaggaagactaggtatttcatgtaagtgtaacatgtattaaactta 16195057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 28143578 - 28143417
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||| ||||||||||| |||  ||||| ||   |||||||| ||||||||||  ||| |||  ||||||||  |||| | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagtttta 28143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 248
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||   ||||| ||   |||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || |||     
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 248  Q
    ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 14942394 - 14942231
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttt 184  Q
    |||||||||||||||||||||||||||  ||||| ||   |||||||| ||||| || |  ||| |||  ||||||||  |||| | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| ||||||| |||||||||| ||||||||||| ||||||||||  ||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttc-aactccagaaatgcagagaaatcgcagtttta 14942231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 20128286 - 20128124
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||||||||||||||||||||||| | |  ||||  || | |||||||| ||||||| || |||||||| || |||||||  |||||| || ||| || |    
T  20128286 ttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaactat-atgt 20128189  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||||||||||||    
T  20128188 tttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagtttta 20128124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 62954 - 63116
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||| ||||| |    ||||| || | |||||||| ||||||| || ||||||||  ||||||||  |||||| || ||| || ||    
T  62954 ttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgtt 63052  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||||| ||||   |||| ||||| ||||||||| | ||||||||||||||    
T  63053 ttttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagtttta 63116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 44219642 - 44219803
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |    |||||  | | |||| ||| || |||| || |||| |||  ||||||||  |||||| |||||| || |||    
T  44219642 taggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattat-atgttt 44219740  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  44219741 tttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagtttta 44219803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 42192240 - 42192399
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    ||||||||||||||||||||| ||   ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| || |||     
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaactat-atgtttt 42192337  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| | ||||||||||||||    
T  42192338 ttgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagtttta 42192399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 249
Target Start/End: Complemental strand, 11540195 - 11540025
Alignment:
Q  78 tattaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaat 176  Q
    |||||||  |||||||||||| |||||||||| |||  ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | ||     
T  11540195 tattaaaaataggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccataaac 11540097  T
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||| || ||| ||||| |||| ||| ||  |||   |||| ||||||||||||||| ||||||||||||||||    
T  11540096 tat-atgttttttgcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagtttta 11540025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 42192790 - 42192629
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||| |||  ||||| || | |||||||| ||||||| || |||||||| | ||||||||  |||| | || ||    ||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaactagatgtttt 42192692  T
Q  187 gttgcatttttcgtccta-cctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
     ||||| |||| ||| || || ||||||| ||| ||||||||||||| ||||||||||||||||    
T  42192691 tttgcagttttagtcatatccccctatttccaa-ctccagaaacgcacagaaatgacagtttta 42192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 33920710 - 33920771
Alignment:
Q  188 ttgcatttttcgtcctacctcc-tattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  33920710 ttgcagttttagtcctatctccctattttcaa-ctccagaaacgcatagaaatgacagtttta 33920771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 43160463 - 43160397
Alignment:
Q  183 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  43160463 tttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 43160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 5560998 - 5560937
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  5560998 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 5560937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 13399520 - 13399581
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  13399520 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 13399581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 15550793 - 15550833
Alignment:
Q  208 cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  15550793 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 15550833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 20127735 - 20127896
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || |||   ||||     
T  20127735 aggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 20127834  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||| ||||||||||| | |||||||| |||||    
T  20127835 ttgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaatttta 20127896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 4356179 - 4356143
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  4356179 tttccaactccagaaacgcacagaaatgacagtttta 4356143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 4809002 - 4809038
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  4809002 tttccaactccagaaacgcacagaaatgacagtttta 4809038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 7e-86; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 50970276 - 50970464
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccctatgct 50970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 90 - 275
Target Start/End: Complemental strand, 4636515 - 4636330
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccctatgct 4636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 21856039 - 21856228
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||| ||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 21856138  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21856139 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 21856228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 91 - 275
Target Start/End: Complemental strand, 17433758 - 17433574
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccctatgct 17433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 39154566 - 39154379
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccctatgct 39154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 29870164 - 29869978
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacccatatgct 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 97 - 275
Target Start/End: Original strand, 33143925 - 33144103
Alignment:
Q  97 tacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttt 196  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  197 tcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 33144103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 90 - 275
Target Start/End: Original strand, 5539817 - 5540002
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    | ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccctatgct 5540002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 90 - 275
Target Start/End: Original strand, 8678542 - 8678727
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccctatgct 8678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 87 - 275
Target Start/End: Complemental strand, 15173640 - 15173453
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccctatgct 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 88 - 275
Target Start/End: Complemental strand, 18984665 - 18984478
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||||||||| ||||||||||    
T  18984565 ttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccctatgct 18984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 15646190 - 15646378
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccctatgct 15646378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 29307487 - 29307327
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 29307327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 89 - 262
Target Start/End: Original strand, 26859059 - 26859232
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagac 262  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||| ||||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttagac 26859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 90 - 273
Target Start/End: Original strand, 5962579 - 5962762
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  190 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatg 273  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggttttaaacttacccctatg 5962762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 9019511 - 9019348
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| |||||||||| |||| |||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttt 9019412  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  9019411 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagtttta 9019348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 50970824 - 50970664
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 50970664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 18984117 - 18984278
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| |||||||||||||||| |||||||    
T  18984217 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagtttta 18984278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 5540364 - 5540204
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 5540204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 15646741 - 15646581
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagtttta 15646581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 29306953 - 29307112
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 29307112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 33144462 - 33144305
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 33144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 29869619 - 29869779
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagtttta 29869779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 8679086 - 8678928
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| ||||| |  ||||| ||| ||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagtttta 8678928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 17112282 - 17112467
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||  || |||||||  ||| ||| |||| ||||   |||||||||||| |||| ||||  |||||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccctatgct 17112467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 15173099 - 15173255
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 15173255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 5963120 - 5962964
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 5962964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 9018970 - 9019122
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttt 9019069  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 239  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||    
T  9019070 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 21856588 - 21856429
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagtttta 21856429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 17433216 - 17433375
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| || |||||||||||| ||| |||||||  | |||||||||||||||||||||||||||||||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||| ||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 17433375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 26859606 - 26859446
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||  |  ||||| |||||||||||||| | |||||||    
T  26859506 gttgcatttttcgtcctaccccccattt--attctccaaaaacgcagagaaataatagtttta 26859446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 39154021 - 39154178
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| || ||||||||| || ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||| | |  ||||| ||||||| ||||||||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagtttta 39154178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 52268289 - 52268416
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  188 ttgcatttttcgtcctacctcctatttt 215  Q
    ||||| ||||||||||||| || |||||    
T  52268389 ttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 2733505 - 2733416
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 175  Q
    ||||||||||||| |||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| |||||||||| | || ||| ||||  ||| ||||||||||||||||||||||||  ||| |||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  191 catttttcgtcctac 205  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 47827141 - 47827033
Alignment:
Q  80 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 179  Q
    ||||| || |||||||| ||||||||| ||| | |||||||||||| |||||||| ||||| |||||||||||||||||||||||  |||||| ||||||    
T  47827141 ttaaattttggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattat 47827043  T
Q  180 catttttgtt 189  Q
    ||||||||||    
T  47827042 catttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 86 - 269
Target Start/End: Complemental strand, 45048684 - 45048504
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| |||||||||||||||||| |||  ||||| ||  ||||||||| ||||| | ||  |||  ||  ||||||||| |||||  || |||||| ||    
T  45048684 ttaggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtccta-aactatcatgtt 45048586  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 269  Q
    | ||||| |||| |||||||||||||||||| ||||||||||||||||||||||  | | ||||||| ||||||||||||||||    
T  45048585 ttttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaaatagccg-tttatgcagttttagacctacccc 45048504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 4636033 - 4636131
Alignment:
Q  149 ttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 248  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||| || ||||| |  || || |||||||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 44802720 - 44802558
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| | |  ||||| ||   |||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |||||| ||    
T  44802720 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtt 44802621  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| || ||||||||||||||| |||||||||||| |||| |||||||| |||||    
T  44802620 ttttgcagttttagttctacctcctattttc-aactccagaaacacagaaaaatgacaatttta 44802558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaa 164  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 17088688 - 17088527
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||||||||||||||||||||||| ||   |||||  |   |||||||| ||||| |||| |||| ||| || |||||||| |||| | || ||| || |    
T  17088688 ttaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atat 17088591  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| || |||||||||||||||||| || ||||||||||||||||||||||||||    
T  17088590 tttttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagtttta 17088527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 17088243 - 17088309
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| |||||||||||||||||| |||| |||||| ||||||||||| ||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttc-aacttcagaaatgcagagaaatggcagtttta 17088309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 45048253 - 45048313
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||| |||||| |||||||||    
T  45048253 ttgcagttttagtcctacctcatattttcaa-ctccagaaacgcatagaaataacagtttta 45048313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 170  Q
    ||||||||| ||||||||||| |||  ||| | || | |||||||| |||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 9992151 - 9992314
Alignment:
Q  86 ttaggcttaattacacttttggtctt-cgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 184  Q
    |||||||||||||||||||||||| | |   ||||| || | ||||| || |||||||  | |||| |||  |||||||| ||||||| || ||| || |    
T  9992151 ttaggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactat-atgt 9992249  T
Q  185 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || ||||| |||| |||||| ||||   |||| |||||||||||| || ||||||||||||||||    
T  9992250 tttttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagtttta 9992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 8229732 - 8229799
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  8229732 ttttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagtttta 8229799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 17641818 - 17641751
Alignment:
Q  182 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  17641818 ttttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 17641751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 39485062 - 39485223
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||| |||||||||||||||||| |||  ||||| |    |||||||| ||||||| ||  ||| |||  ||||||||  |||| | || ||| || ||    
T  39485062 ttaggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactat-atgtt 39485160  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    | ||||| |||| |||||| ||||||||||||| || ||||||| |||||| ||||||||||||    
T  39485161 ttttgcagttttagtcctatctcctattttcaa-cttcagaaacacagagagatgacagtttta 39485223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 9833599 - 9833539
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||||| ||||||||||| ||||||||||||| |||||| ||| |||||    
T  9833599 ttgcagttttagtcctaccccctattttcaa-ctccagaaacgcacagaaataacattttta 9833539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 44291769 - 44291701
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtt 246  Q
    |||||| ||| ||||| |||| |||||||| ||||||||| |||||||||||| || ||||||| |||||    
T  44291769 tatcatgttttttgcagttttagtcctaccccctattttc-aactccagaaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 44954674 - 44954613
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||| |||||| ||||   |||| ||||||||||||||| ||||||||||||||||    
T  44954674 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagtttta 44954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 8230064 - 8230028
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  8230064 tttccaactccagaaacgcacagaaatgacagtttta 8230028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 29021311 - 29021252
Alignment:
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 248  Q
    ||||| |||| ||| |||| ||||||||||| ||||||||||||| | |||||||||||||    
T  29021311 ttgcagttttagtcttaccccctattttcaa-ctccagaaacgcacataaatgacagtttt 29021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 34555803 - 34555767
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  34555803 tttccaactccagaaacgcacagaaatgacagtttta 34555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 44954349 - 44954385
Alignment:
Q  213 tttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  44954349 tttccaactccagaaacgcacagaaatgacagtttta 44954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 50926789 - 50926658
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||||| |||  ||||| ||   |||||||| |||||| | |  ||| |||  ||||||||| |||| | || ||||||||||    
T  50926789 taggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcattttt 50926690  T
Q  187 gttgcatttttcgtcc-tacctcctattttcaa 218  Q
     ||||| |||| |||| |||| |||||||||||    
T  50926689 -ttgcagttttagtccttaccccctattttcaa 50926658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctaccc 268  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 111 - 249
Target Start/End: Original strand, 10643 - 10780
Alignment:
Q  111 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcct 210  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |     
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctcc 10742  T
Q  211 attttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |  ||||| ||| ||||||||||||||||||||    
T  10743 atttt-attctccaaaaatgcagagaaatgacagtttta 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 136; Significance: 5e-71; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 92 - 275
Target Start/End: Complemental strand, 64847 - 64664
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    ||||||||||||| || |||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||| |||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacctctatgct 64664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 64301 - 64461
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||||||||||||||||||| |||||||||| | || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 64461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 249
Target Start/End: Complemental strand, 205911 - 205755
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||| ||| ||   ||||| || | |||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    || |||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||    
T  205812 cagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagtttta 205755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 205038 - 205109
Alignment:
Q  177 tatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| ||| ||||| |||| |||||||||||||||||| ||||| |||||| ||||||||||  |||||||    
T  205038 tatcatgttttttgcagttttagtcctacctcctattttc-aactctagaaacacagagaaatggaagtttta 205109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 1286 - 1126
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 188  Q
    ||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  189 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagtttta 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 755 - 911
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 124; Significance: 8e-64; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 128 - 275
Target Start/End: Original strand, 4242 - 4389
Alignment:
Q  128 cacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaa 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  228 acgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccctatgct 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 4754 - 4593
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  187 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||||||||||||||||| || ||||| |  ||||| |||| |||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagtttta 4593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 5334 - 5160
Alignment:
Q  91 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 190  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  191 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccc 269  Q
    ||||||||||    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  5234 catttttcgt----cctcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttacccc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 4790 - 4952
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  4890 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 4952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 17024 - 16855
Alignment:
Q  106 ggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 205  Q
    |||| |||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  206 ctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccctatgct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 16564 - 16655
Alignment:
Q  157 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagtttta 16655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 42172 - 42329
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||| ||  ||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagtttta 42329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 42706 - 42545
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    ||||||||||||| |||||||| | ||||||||||| ||| ||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  42706 ttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 42607  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    |||| |||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  42606 tgtttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 42545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 134221 - 134059
Alignment:
Q  86 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 185  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||| ||||||||||| ||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttt 134122  T
Q  186 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  134121 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 134059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 9935 - 10116
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| || ||||||||||| | ||||||||| |||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttatgcggttttagacctacccctatgct 275  Q
    | ||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||| || ||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggttttaaacatacccctatgct 10116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 92 - 249
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  192 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||||||| || ||||| |  ||||| |||  |||||||||||||||||||    
T  10314 atttttcgtcctacc-cccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 18834 - 18993
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||||| ||||||||||||||| |  |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  188 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||| || ||||| |  ||||| |||||||||||||| |||||||||    
T  18934 ttgcatttttcatcctacc-cccatttt-attctccaaaaacgcagagaaataacagtttta 18993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  89 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 186  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 28789 - 28674
Alignment:
Q  88 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 187  Q
    |||| ||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  188 ttgcatttttcgtcct 203  Q
    ||||| ||||||||||    
T  28689 ttgcagttttcgtcct 28674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 568 - 692
Alignment:
Q  90 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 189  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| || || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  190 gcatttttcgtcctacctcctattt 214  Q
    | ||||||||||  |||||| ||||    
T  668 gtatttttcgtctcacctcccattt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  192 a 192  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 454 - 565
Alignment:
Q  93 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 192  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||| ||  ||||||||||| |||| ||  ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  193 tttttcgtcctac 205  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 62000 - 61877
Alignment:
Q  92 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 191  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| ||||||| ||||||||||| |||||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  192 atttttcgtcctacctcctatttt 215  Q
    ||||||||||||||| || |||||    
T  61900 atttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  87 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaa 163  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 7784 - 7707
Alignment:
Q  138 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 215  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 6818 - 6778
Alignment:
Q  208 cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  6818 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 6836 - 6796
Alignment:
Q  208 cctattttcaaactccagaaacgcagagaaatgacagtttta 249  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  6836 cctattttcaa-ctccagaaacgcacagaaatgacagtttta 6796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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