View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1412_low_94 (Length: 242)
Name: NF1412_low_94
Description: NF1412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1412_low_94 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 11696661 - 11696880
Alignment:
| Q |
1 |
acacttgttaatgtgctctctgcttgcactcatttagggtctcctgatcttggaaagtgtatacacgggatcttgttgaggaacattagtgaactcaatg |
100 |
Q |
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| T |
11696661 |
acacttgttaatgtgctctctgcttgcactcatttagggtctcctgatcttggaaagtgtatacacgggatcttgttgaggaacattagtgaactcaatg |
11696760 |
T |
|
| Q |
101 |
ttgttgtgaagacttcgttaattgatatgtatgtcaagtgtggatgtcttgagaaaggtttacgcgtattcgagaatatgtcggagaagaatagattttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||| |
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| T |
11696761 |
ttgttgtgaagacttcgttaattgatatgtatgtcaagagtggatgtcttgagaaaggtttacgcgtattcaaaaatatgtcggagaagaatagatattc |
11696860 |
T |
|
| Q |
201 |
ttacactgtaatgatatctg |
220 |
Q |
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|||||||||||||||||||| |
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| T |
11696861 |
ttacactgtaatgatatctg |
11696880 |
T |
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