View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14131_low_4 (Length: 578)

Name: NF14131_low_4
Description: NF14131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14131_low_4
NF14131_low_4
[»] chr3 (53 HSPs)
chr3 (16-222)||(24569816-24570021)
chr3 (224-422)||(24569325-24569532)
chr3 (424-568)||(24568910-24569054)
chr3 (339-513)||(38389452-38389625)
chr3 (352-509)||(11610935-11611088)
chr3 (358-512)||(23638050-23638201)
chr3 (352-513)||(3863350-3863507)
chr3 (352-471)||(28992815-28992935)
chr3 (357-513)||(13495319-13495472)
chr3 (357-513)||(32553392-32553544)
chr3 (349-423)||(9710961-9711035)
chr3 (352-513)||(51618070-51618225)
chr3 (339-512)||(54527707-54527879)
chr3 (359-513)||(16875025-16875175)
chr3 (384-471)||(23320122-23320206)
chr3 (352-514)||(46492342-46492501)
chr3 (330-513)||(50204399-50204581)
chr3 (349-512)||(8497421-8497584)
chr3 (372-453)||(15862961-15863043)
chr3 (352-514)||(20938077-20938236)
chr3 (369-453)||(37055426-37055507)
chr3 (339-512)||(42180057-42180229)
chr3 (349-513)||(36426409-36426572)
chr3 (352-417)||(51339276-51339341)
chr3 (379-512)||(7940838-7940969)
chr3 (352-512)||(35094976-35095131)
chr3 (359-456)||(54621275-54621368)
chr3 (352-512)||(37332135-37332290)
chr3 (368-419)||(46845531-46845582)
chr3 (352-456)||(50364211-50364311)
chr3 (352-420)||(2379162-2379227)
chr3 (349-422)||(27549555-27549631)
chr3 (390-514)||(35414808-35414929)
chr3 (376-455)||(38785924-38786000)
chr3 (357-512)||(40497073-40497224)
chr3 (349-421)||(51567906-51567979)
chr3 (242-286)||(20871254-20871297)
chr3 (368-423)||(47386958-47387014)
chr3 (373-421)||(53537080-53537128)
chr3 (430-513)||(40330295-40330378)
chr3 (427-513)||(23523038-23523124)
chr3 (339-418)||(24086989-24087070)
chr3 (378-513)||(29686367-29686498)
chr3 (363-417)||(30214103-30214156)
chr3 (352-418)||(37444167-37444232)
chr3 (369-423)||(49396388-49396442)
chr3 (376-455)||(23803104-23803180)
chr3 (424-465)||(29932400-29932441)
chr3 (424-465)||(29981554-29981595)
chr3 (352-397)||(43750072-43750117)
chr3 (378-512)||(1569191-1569322)
chr3 (359-451)||(26486439-26486525)
chr3 (426-514)||(48346364-48346450)
[»] chr4 (52 HSPs)
chr4 (328-512)||(16667385-16667568)
chr4 (349-514)||(47326891-47327053)
chr4 (349-514)||(47341687-47341849)
chr4 (328-513)||(54495637-54495821)
chr4 (339-514)||(23545481-23545655)
chr4 (339-513)||(8736811-8736983)
chr4 (359-513)||(29190816-29190966)
chr4 (368-513)||(2096907-2097049)
chr4 (349-513)||(27362408-27362569)
chr4 (352-451)||(6875521-6875617)
chr4 (386-512)||(51070399-51070520)
chr4 (357-513)||(25843316-25843472)
chr4 (339-513)||(17409829-17410002)
chr4 (339-513)||(19450900-19451073)
chr4 (339-513)||(33632203-33632375)
chr4 (352-451)||(7349709-7349804)
chr4 (349-513)||(27019277-27019438)
chr4 (349-419)||(39539481-39539551)
chr4 (379-423)||(27298938-27298982)
chr4 (423-511)||(42479894-42479982)
chr4 (369-514)||(53961360-53961501)
chr4 (339-513)||(19468199-19468372)
chr4 (352-513)||(49181092-49181250)
chr4 (377-513)||(9326865-9327002)
chr4 (377-513)||(9373587-9373724)
chr4 (377-513)||(9381899-9382036)
chr4 (357-423)||(49332358-49332424)
chr4 (395-514)||(1378081-1378196)
chr4 (357-512)||(52391323-52391475)
chr4 (350-421)||(24297390-24297461)
chr4 (368-423)||(42480009-42480064)
chr4 (376-418)||(16069299-16069341)
chr4 (352-451)||(36000002-36000097)
chr4 (363-417)||(41415649-41415703)
chr4 (349-513)||(51691359-51691519)
chr4 (339-421)||(3085357-3085441)
chr4 (346-423)||(34941292-34941369)
chr4 (384-513)||(53376408-53376535)
chr4 (349-455)||(13009813-13009916)
chr4 (357-510)||(24684861-24685012)
chr4 (384-441)||(35645073-35645127)
chr4 (359-417)||(10813587-10813645)
chr4 (352-464)||(27756582-27756690)
chr4 (369-441)||(38222323-38222392)
chr4 (368-417)||(23438192-23438241)
chr4 (424-465)||(32459419-32459460)
chr4 (369-422)||(37784948-37785001)
chr4 (424-465)||(43759515-43759556)
chr4 (359-416)||(49228384-49228441)
chr4 (402-448)||(33559271-33559314)
chr4 (369-417)||(48910894-48910942)
chr4 (390-512)||(55813922-55814041)
[»] chr7 (42 HSPs)
chr7 (352-470)||(19868134-19868249)
chr7 (379-512)||(7899487-7899617)
chr7 (352-513)||(19889361-19889518)
chr7 (352-513)||(39757110-39757267)
chr7 (384-513)||(8420833-8420959)
chr7 (357-513)||(23982755-23982908)
chr7 (352-513)||(9331982-9332139)
chr7 (346-456)||(12085988-12086094)
chr7 (352-514)||(25709398-25709557)
chr7 (352-513)||(32117835-32117992)
chr7 (352-456)||(47120251-47120351)
chr7 (352-522)||(5909273-5909439)
chr7 (352-423)||(12650841-12650912)
chr7 (321-513)||(3561878-3562068)
chr7 (352-422)||(24699156-24699225)
chr7 (343-448)||(31066800-31066903)
chr7 (376-451)||(2276719-2276791)
chr7 (369-514)||(384430-384570)
chr7 (352-441)||(36548532-36548617)
chr7 (376-511)||(18102232-18102364)
chr7 (369-497)||(12624675-12624798)
chr7 (330-417)||(24250310-24250399)
chr7 (357-418)||(44806959-44807020)
chr7 (339-514)||(45501464-45501638)
chr7 (348-423)||(8091399-8091474)
chr7 (384-441)||(11680090-11680144)
chr7 (357-510)||(24462958-24463107)
chr7 (352-513)||(33343009-33343166)
chr7 (368-511)||(28323172-28323311)
chr7 (424-512)||(28061324-28061412)
chr7 (339-400)||(29398224-29398287)
chr7 (352-513)||(47457461-47457619)
chr7 (351-421)||(29692629-29692699)
chr7 (359-421)||(38759975-38760037)
chr7 (352-418)||(39869143-39869209)
chr7 (381-512)||(3530115-3530242)
chr7 (424-465)||(38798118-38798159)
chr7 (424-465)||(38798256-38798297)
chr7 (424-465)||(42593442-42593483)
chr7 (424-465)||(45645456-45645497)
chr7 (371-418)||(27300466-27300514)
chr7 (369-439)||(38554275-38554342)
[»] chr6 (27 HSPs)
chr6 (339-512)||(6016861-6017033)
chr6 (339-513)||(18332688-18332861)
chr6 (339-514)||(10887034-10887208)
chr6 (357-512)||(31069583-31069734)
chr6 (352-513)||(2830681-2830838)
chr6 (352-461)||(22974625-22974730)
chr6 (352-461)||(23813671-23813776)
chr6 (357-514)||(30591162-30591316)
chr6 (352-461)||(5362945-5363050)
chr6 (352-513)||(12454086-12454243)
chr6 (339-513)||(34692359-34692532)
chr6 (357-513)||(31169763-31169916)
chr6 (339-421)||(30623331-30623415)
chr6 (424-512)||(31503831-31503919)
chr6 (352-513)||(29863302-29863460)
chr6 (369-441)||(1017850-1017919)
chr6 (352-512)||(8977467-8977624)
chr6 (352-418)||(26602522-26602588)
chr6 (357-417)||(3850577-3850637)
chr6 (372-440)||(29730318-29730383)
chr6 (349-421)||(4371856-4371929)
chr6 (424-465)||(34733749-34733790)
chr6 (352-396)||(2086949-2086993)
chr6 (372-505)||(17154662-17154793)
chr6 (352-388)||(17596333-17596369)
chr6 (352-423)||(28757573-28757644)
chr6 (346-417)||(32615552-32615626)
[»] scaffold0111 (1 HSPs)
scaffold0111 (339-513)||(37114-37287)
[»] chr1 (46 HSPs)
chr1 (379-512)||(9516628-9516758)
chr1 (339-513)||(30171884-30172057)
chr1 (339-513)||(30187425-30187598)
chr1 (317-513)||(34801951-34802145)
chr1 (379-512)||(35438762-35438892)
chr1 (352-513)||(313770-313927)
chr1 (339-514)||(23591703-23591877)
chr1 (352-513)||(39150327-39150484)
chr1 (352-513)||(17919474-17919631)
chr1 (385-512)||(13241810-13241934)
chr1 (352-513)||(36490799-36490957)
chr1 (378-513)||(30288864-30288995)
chr1 (346-514)||(51920430-51920595)
chr1 (352-513)||(44918045-44918202)
chr1 (374-513)||(6569985-6570120)
chr1 (357-513)||(30362995-30363148)
chr1 (423-512)||(43909281-43909368)
chr1 (339-513)||(6180191-6180364)
chr1 (352-441)||(8062225-8062310)
chr1 (359-422)||(19277815-19277878)
chr1 (349-513)||(22167352-22167513)
chr1 (349-513)||(38812757-38812918)
chr1 (358-419)||(21854208-21854269)
chr1 (363-419)||(31101024-31101079)
chr1 (367-514)||(2222235-2222377)
chr1 (339-513)||(35512730-35512903)
chr1 (330-410)||(51382368-51382450)
chr1 (423-509)||(20357358-20357444)
chr1 (423-509)||(20562511-20562597)
chr1 (339-421)||(7824947-7825031)
chr1 (369-418)||(39930892-39930941)
chr1 (368-440)||(49195647-49195719)
chr1 (422-513)||(4249293-4249384)
chr1 (422-513)||(4249617-4249708)
chr1 (422-513)||(4249941-4250032)
chr1 (379-417)||(281030-281068)
chr1 (359-441)||(23378574-23378655)
chr1 (372-421)||(11744917-11744966)
chr1 (339-413)||(22331628-22331704)
chr1 (339-421)||(23808440-23808523)
chr1 (424-465)||(42589261-42589302)
chr1 (424-465)||(44013014-44013055)
chr1 (369-421)||(30109095-30109147)
chr1 (352-453)||(32716223-32716320)
chr1 (357-451)||(39627633-39627724)
chr1 (403-467)||(50467431-50467493)
[»] chr2 (32 HSPs)
chr2 (352-513)||(27665044-27665201)
chr2 (352-513)||(16126559-16126716)
chr2 (360-513)||(36731208-36731358)
chr2 (352-511)||(19228446-19228601)
chr2 (352-511)||(15411624-15411780)
chr2 (352-513)||(12016687-12016844)
chr2 (352-514)||(20566016-20566175)
chr2 (369-513)||(9747354-9747495)
chr2 (352-511)||(14377445-14377600)
chr2 (359-514)||(45062225-45062377)
chr2 (368-511)||(2060044-2060184)
chr2 (339-421)||(7720120-7720204)
chr2 (390-513)||(9450315-9450435)
chr2 (352-461)||(22705475-22705580)
chr2 (352-512)||(12919351-12919509)
chr2 (352-514)||(16919153-16919311)
chr2 (352-417)||(39904140-39904205)
chr2 (359-441)||(2051641-2051720)
chr2 (352-514)||(23932585-23932744)
chr2 (357-512)||(34213950-34214104)
chr2 (368-419)||(43388857-43388908)
chr2 (339-513)||(43806365-43806538)
chr2 (352-417)||(10690803-10690868)
chr2 (424-513)||(29157829-29157918)
chr2 (352-418)||(22162169-22162234)
chr2 (424-465)||(3286584-3286625)
chr2 (368-455)||(11660977-11661060)
chr2 (384-448)||(25068539-25068603)
chr2 (352-417)||(26229946-26230010)
chr2 (424-465)||(43941902-43941943)
chr2 (357-409)||(4579889-4579941)
chr2 (403-461)||(35729188-35729243)
[»] chr8 (50 HSPs)
chr8 (357-471)||(34249702-34249814)
chr8 (368-511)||(20514669-20514809)
chr8 (352-513)||(10129124-10129281)
chr8 (339-513)||(31812118-31812291)
chr8 (358-456)||(9743888-9743982)
chr8 (352-513)||(7140459-7140616)
chr8 (379-511)||(7393247-7393375)
chr8 (349-513)||(26834578-26834739)
chr8 (326-513)||(26682060-26682246)
chr8 (359-512)||(13327942-13328091)
chr8 (357-417)||(8140593-8140653)
chr8 (339-513)||(12131988-12132161)
chr8 (348-423)||(37264517-37264592)
chr8 (369-513)||(6818054-6818195)
chr8 (352-513)||(8284568-8284727)
chr8 (361-512)||(34741666-34741813)
chr8 (329-513)||(38843699-38843882)
chr8 (351-513)||(12189588-12189747)
chr8 (351-513)||(12434016-12434175)
chr8 (372-513)||(18567416-18567553)
chr8 (369-511)||(38047940-38048078)
chr8 (352-513)||(39701803-39701960)
chr8 (377-513)||(29642648-29642781)
chr8 (385-461)||(31133889-31133961)
chr8 (330-421)||(36967159-36967252)
chr8 (339-421)||(45005975-45006059)
chr8 (372-513)||(9801709-9801846)
chr8 (352-513)||(35678275-35678432)
chr8 (384-422)||(26195495-26195533)
chr8 (349-418)||(9580201-9580270)
chr8 (352-413)||(38527841-38527902)
chr8 (359-427)||(9824986-9825054)
chr8 (359-441)||(10974626-10974705)
chr8 (359-448)||(40210886-40210971)
chr8 (367-418)||(6850669-6850720)
chr8 (352-513)||(14816126-14816283)
chr8 (352-513)||(14829457-14829614)
chr8 (346-421)||(16445824-16445899)
chr8 (359-418)||(44091346-44091404)
chr8 (357-423)||(5573313-5573379)
chr8 (357-423)||(12346031-12346097)
chr8 (424-465)||(10543677-10543718)
chr8 (402-513)||(14961663-14961771)
chr8 (468-513)||(15198900-15198945)
chr8 (352-409)||(19343937-19343994)
chr8 (346-418)||(4080485-4080557)
chr8 (346-418)||(4084634-4084706)
chr8 (346-418)||(4102941-4103013)
chr8 (373-421)||(13496820-13496868)
chr8 (349-421)||(34869611-34869683)
[»] scaffold0061 (1 HSPs)
scaffold0061 (330-513)||(52779-52960)
[»] scaffold0017 (1 HSPs)
scaffold0017 (330-513)||(145674-145855)
[»] chr5 (38 HSPs)
chr5 (352-514)||(12641992-12642150)
chr5 (352-513)||(2795544-2795701)
chr5 (360-514)||(32019983-32020134)
chr5 (359-513)||(4047440-4047590)
chr5 (346-471)||(10665007-10665128)
chr5 (369-514)||(15240949-15241091)
chr5 (346-461)||(9184222-9184333)
chr5 (359-513)||(6863584-6863734)
chr5 (352-461)||(30328379-30328484)
chr5 (357-512)||(34578037-34578188)
chr5 (346-513)||(13515926-13516089)
chr5 (330-514)||(31365949-31366133)
chr5 (352-512)||(33072697-33072856)
chr5 (369-514)||(35469590-35469733)
chr5 (339-513)||(3398225-3398398)
chr5 (369-418)||(5958215-5958264)
chr5 (352-417)||(11375980-11376045)
chr5 (427-512)||(14466495-14466580)
chr5 (339-421)||(18841794-18841878)
chr5 (358-419)||(24329726-24329787)
chr5 (352-450)||(28629899-28629993)
chr5 (349-441)||(40309499-40309590)
chr5 (369-511)||(31567493-31567632)
chr5 (352-513)||(11636752-11636909)
chr5 (390-451)||(11692690-11692749)
chr5 (373-512)||(41350244-41350379)
chr5 (369-418)||(16174713-16174762)
chr5 (339-421)||(26376658-26376742)
chr5 (405-513)||(23995416-23995523)
chr5 (359-417)||(15190900-15190958)
chr5 (424-465)||(12332426-12332467)
chr5 (424-465)||(13761759-13761800)
chr5 (424-465)||(31613197-31613238)
chr5 (424-465)||(31705018-31705059)
chr5 (426-514)||(39990038-39990124)
chr5 (424-465)||(40454150-40454191)
chr5 (349-421)||(3737965-3738036)
chr5 (348-421)||(26265133-26265208)
[»] scaffold0009 (2 HSPs)
scaffold0009 (362-512)||(191316-191461)
scaffold0009 (372-512)||(43503-43641)
[»] scaffold0011 (1 HSPs)
scaffold0011 (359-513)||(13113-13263)
[»] scaffold0036 (1 HSPs)
scaffold0036 (349-514)||(94017-94179)
[»] scaffold0149 (1 HSPs)
scaffold0149 (373-512)||(22503-22641)
[»] scaffold0305 (1 HSPs)
scaffold0305 (372-514)||(17995-18134)
[»] scaffold0018 (1 HSPs)
scaffold0018 (373-513)||(182085-182220)
[»] scaffold0618 (1 HSPs)
scaffold0618 (359-418)||(8506-8564)
[»] scaffold0155 (1 HSPs)
scaffold0155 (352-455)||(3471-3571)
[»] scaffold0074 (1 HSPs)
scaffold0074 (369-418)||(45989-46038)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 9e-90; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 16 - 222
Target Start/End: Complemental strand, 24570021 - 24569816
Alignment:
Q  16 catttttaattaattgaaacattat--cttttaattctataatcagtcagcaagcgatagcgttgatgttttcactggggtcgttcttatgcatgacaat 113  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  24570021 catttttaattaattgaaacattatgtcttttaattctatagtcagtcagcaagcgatagtgttgatgttttcactggggtcgttcttatgtatgacaat 24569922  T
Q  114 tgtgcatgtggtcaaaaggtgcatttctttcgttaatctctttggcgtcagtatcatcatgctctttgatcccggtggaagtcacagttttccgttgtca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  24569921 tgtgcatgtggtcaaaaggtgcatttctttcgttaatctctttggcgtcagta---tcatgctctttgatcccggtggaagtcacagttttccgttgtca 24569825  T
Q  214 accttgttg 222  Q
    |||| ||||    
T  24569824 acctcgttg 24569816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 224 - 422
Target Start/End: Complemental strand, 24569532 - 24569325
Alignment:
Q  224 gtattattttgtgcaatatttagctttgtaatccaaactcaagttaagaattcttcttaccttaaggttgaaggaagccgtcaagactagtgattgc--- 320  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  24569532 gtattattttgtgcaatatttagctttgtaatccaaacttaagttaagaattcttcttaccttaaggttgaaggaagccgtcaagactagtgattgctat 24569433  T
Q  321 ----taataaaattaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttatta 414  Q
        ||||||||||||||||||||||||||||  || |||||||||||||||||||||| || || ||| |||| |||||||||||||||||||||||||    
T  24569432 aggataataaaattaggctttctctaacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttatta 24569333  T
Q  415 aaaagtta 422  Q
    ||||||||    
T  24569332 aaaagtta 24569325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 424 - 568
Target Start/End: Complemental strand, 24569054 - 24568910
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaactgataaaatt 523  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| || | |||||||||||| ||||||||    
T  24569054 tatatatttaatataaaacatacaagttccaagataaatttatcatttaaaaaattttaacatgtgaaaatttacatacgatagaaaaactcataaaatt 24568955  T
Q  524 atgttagtagttttagaacattagttatttgtttagttatatatt 568  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24568954 atgttagtagttttagaacattagttatttgtttagttatatatt 24568910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 38389452 - 38389625
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||| | |||||||||||||||||| |||||||||||  | |||||||||||||||    || ||||||||||    
T  38389452 tctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctacatatttaata 38389548  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  |||||||||||||  ||| ||| || || |||  | |||||||||  |||||||||||||||||||||||    
T  38389549 tgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38389625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 509
Target Start/End: Original strand, 11610935 - 11611088
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||     ||| ||||||||||||||| |||||||||    
T  11610935 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacacaagtt 11611030  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaa 509  Q
    |||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||    
T  11611031 ccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 512
Target Start/End: Complemental strand, 23638201 - 23638050
Alignment:
Q  358 catgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaaga 457  Q
    |||||||||  |||| |||||||||| |||  |||||||||||||||||||||| |||||||   || |||||||||||||||| ||||||||| |||||    
T  23638201 catgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaag---ttgtatatttaatataaaatacacaagtttcaaga 23638105  T
Q  458 taaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
      |||||| ||||| |||  | |||||||||  |||||||| ||||||| |||||    
T  23638104 ctaacttaccattttaaatttcttaacatgtgcaaatttgctcatgatataaaaa 23638050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 3863350 - 3863507
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||| ||||||| ||||||||||||| || |||||||| |||||||  |    | ||||||||||||||| |||||||||    
T  3863350 attgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagct----acatatttaatataaaaaacacaagtt 3863445  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| |||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  3863446 ccaagctaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3863507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 471
Target Start/End: Complemental strand, 28992935 - 28992815
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtta-ttatatatttaatataaaacacacaagt 450  Q
    |||| ||||||||| |||| |||||||||||| |||||||| ||||| || ||||||||| ||||||   | ||||| ||||||||||||| |||||| |    
T  28992935 attgcacatgttaaaacaattaaaagtagtaacttttcattaaaaaatattaattatttaataaaaaaaaagttatacatttaatataaaatacacaaat 28992836  T
Q  451 tccaagataaacttatcattt 471  Q
    |  ||||||||||||||||||    
T  28992835 tttaagataaacttatcattt 28992815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 513
Target Start/End: Original strand, 13495319 - 13495472
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||||  |||||||||||||||||||| |||||||| || |||||||||||||||||     || |||||||||||||||  |||||||||||||    
T  13495319 acatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaa---cctacatatttaatataaaatgcacaagttccaag 13495415  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
      ||| |||  | || |||  | ||| |||||  |||||| ||||||||||||||||    
T  13495416 tcaaaattactactttaaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 357 - 513
Target Start/End: Original strand, 32553392 - 32553544
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||||  || |||||||||||| ||||||||||||| ||  |||||||  |||||    ||||| ||||||||||||||| ||||||||| |||     
T  32553392 acatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaa----tattacatatttaatataaaaaacacaagtttcaaa 32553487  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     |||| |||| | || |||  | |||||||||  |||||| ||||||||||||||||    
T  32553488 ttaaagttattaatttaaacttcttaacatgtgtaaatttacacatgatagaaaaac 32553544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 349 - 423
Target Start/End: Original strand, 9710961 - 9711035
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    ||||||| ||||||||| |||||||||| |||||| |||| ||||||||||| |||||||| |||||||| ||||    
T  9710961 aacattgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaaatttat 9711035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 51618070 - 51618225
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||| ||||||||||| || || |||| | ||||||||| ||||||||||||||||      ||||||||||||| ||||   |||||||    
T  51618070 attgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa------tatatatttaatacaaaatgtacaagtt 51618163  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||   ||| |||  |||| |||  | |||||||||  |||||||||||||||||||||||    
T  51618164 ccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 51618225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 512
Target Start/End: Complemental strand, 54527879 - 54527707
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||   || |||||||||||    
T  54527879 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaag---ttttatatttaata 54527783  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | |||   ||||||||||| | ||| ||   |||| |||  | |||||||||  |||||||||||| |||||||||    
T  54527782 ttaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacataatagaaaaa 54527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 513
Target Start/End: Complemental strand, 16875175 - 16875025
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||||  |||||||||||||||||||| |||||||| || ||||| || |||||||  |    | ||||||||||||||| ||||||||| |||| |    
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagct----acatatttaatataaaaaacacaagtttcaagtt 16875080  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  | || |||  | |||||||||  ||||||||||| |||||||||||    
T  16875079 aaagttactactttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 16875025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 471
Target Start/End: Original strand, 23320122 - 23320206
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcattt 471  Q
    ||||| ||||||||||||||||||||||||||||||    |||||||||||||||||| |||| |||| ||||| ||| ||| |||||    
T  23320122 ttttttattgaaaaacatcaattatttattaaaaag---atatatatttaatataaaatacacgagtttcaagacaaatttaccattt 23320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 46492501 - 46492342
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||  ||||||||||| |||| |||| ||||||||||| ||||||||||||||  ||   |||||||||||||| ||||   |||||||    
T  46492501 attgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgag---ttatatatttaatacaaaatgtacaagtt 46492405  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
     |||   ||| |||  | || |||  | ||||| ||| |||||||||||||||||||||||||    
T  46492404 tcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatgatagaaaaact 46492342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 330 - 513
Target Start/End: Original strand, 50204399 - 50204581
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattata 427  Q
    |||| ||| ||||||||||  ||||||| ||||||||| |||||||| |||||||||||||  ||| |||| | ||||||| |||| |||||   || ||    
T  50204399 tagggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaag---tttta 50204495  T
Q  428 tatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||||||| |||   ||| ||||||| | ||| ||   |||| |||  | |||||||||  |||||||||||||||||||||||    
T  50204496 tatttaatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 50204581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 512
Target Start/End: Complemental strand, 8497584 - 8497421
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaa---tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacaca 445  Q
    ||||||| ||||||||| ||||||||||||| |||   ||||| |||||||||   |||||| |||||||||| |||||   |||| ||||||||||| |    
T  8497584 aacattgcacatgttaaaacaactaaaagtaataaggcttttttattgaaaaattacaattaattattaaaaacttatt---tattaaatataaaacata 8497488  T
Q  446 caagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    |||||| |||   ||| |||  |||| |||  |||||||||| | |||||| || ||||||||||||    
T  8497487 caagtttcaatgcaaaattacaattttaaagtttttaacatggccaaatttacatatgatagaaaaa 8497421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 372 - 453
Target Start/End: Complemental strand, 15863043 - 15862961
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat-tatatatttaatataaaacacacaagttcc 453  Q
    ||||||||| || ||| |||||||||| | |||||||||||| ||||||||| ||||||| ||||||||||  ||||||||||    
T  15863043 taaaagtagcaactttacattgaaaaagaacaattatttatttaaaagttatatatatatataatataaaatgcacaagttcc 15862961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 514
Target Start/End: Original strand, 20938077 - 20938236
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatat-aaaacacacaagt 450  Q
    |||| ||||||||||  ||||||||||| ||| |||| ||||||||  | |||||||| |||||||    |||| ||||||||||| |||| ||||||||    
T  20938077 attgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaa----attacatatttaatataaaaaaacacaagt 20938172  T
Q  451 tccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||||  ||| |||  | || |||  | ||| |||||  ||||||||||||||||||||||||    
T  20938173 tccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaact 20938236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 37055507 - 37055426
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttcc 453  Q
    |||||||| |||||| ||| |||||||||| | ||||||||||||||||||   || |||| ||||||||||| |||||||||||    
T  37055507 aactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaag---ttttatagttaatataaaaaacacaagttcc 37055426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 339 - 512
Target Start/End: Original strand, 42180057 - 42180229
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||   ||||||||||| |||||   || |||||||||||    
T  42180057 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaag---ttttatatttaata 42180153  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | |||   ||||||||||| | ||| || | |||| |||  | |||||||||  |||||| |||||||||||||||    
T  42180154 ttaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 42180229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 513
Target Start/End: Complemental strand, 36426572 - 36426409
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaat--ttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacac 446  Q
    ||||||| ||||||||| | | ||||||||||||||  |||| || ||||||||  | |||||||||||||||    || ||||||||||| |||  |||    
T  36426572 aacattgcacatgttaaaatatctaaaagtagtaattttttttatcgaaaaacaaaacttatttattaaaaag---ctacatatttaatatgaaatgcac 36426476  T
Q  447 aagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||||  ||| ||| || || |||  | |||||||||  |||||| ||||||||||||||||    
T  36426475 aagttccaagtcaaaattaccactttaaacttcttaacatgtgtaaatttacacatgatagaaaaac 36426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 51339341 - 51339276
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| ||||||||||  |||||||| |||||||||||||||||||| || |||||||| |||||||    
T  51339341 attgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaa 51339276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 512
Target Start/End: Original strand, 7940838 - 7940969
Alignment:
Q  379 agtaatttttcattgaaaaa-catcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaa 477  Q
    ||||| |||||||||||||| ||  |||||||||||||||||||||   ||||||||||||||| ||| ||||| ||||| ||| ||| ||||| |||      
T  7940838 agtaacttttcattgaaaaaacactaattatttattaaaaagttat---atatttaatataaaatacagaagttacaagacaaatttaccattttaaatt 7940934  T
Q  478 ttttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | |||||   |  ||||||||| ||||||||||||    
T  7940935 tcttaacgcatgtaaatttgcatatgatagaaaaa 7940969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 512
Target Start/End: Original strand, 35094976 - 35095131
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||| ||||| ||||||||||||||||||    |||||||||||||   || |||||||||||||||| | | || ||    
T  35094976 attgcacatgttaaggtaactaaaagcagtaacttttcattgaaaaacatc----atttattaaaaag---ttgtatatttaatataaaatatataaatt 35095068  T
Q  452 ccaagataaacttatcatttaaaaaatttta--acatgtcaaaatttgcacatgatagaaaaa 512  Q
     ||||||||| |||  |||| |||  |||||  | ||||  |||||||||||||||| |||||    
T  35095069 tcaagataaatttactattttaaattttttaatatatgtataaatttgcacatgataaaaaaa 35095131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 54621368 - 54621275
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||  || ||||||||||||||||||||| |||| || |||||||| ||||||    | ||| ||||||||||||||| |||||| |||||||    
T  54621368 atgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaa----tgttacatatttaatataaaaaacacaacttccaag 54621275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 512
Target Start/End: Original strand, 37332135 - 37332290
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||  ||||||||| ||  ||||||| ||| |||||||| ||| |||||| |||||    ||||||||||||||||||| |||||| ||    
T  37332135 attgcacatgttaatgcaactaaaattacaaattttttattaaaaaacattaat-atttatgaaaaa----ttatatatttaatataaaatacacaaatt 37332229  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
      |||| ||||||| ||||| |||  | | |||||||  |||||||||||| ||| |||||    
T  37332230 taaagacaaacttaccattttaaatttatcaacatgtgtaaatttgcacataataaaaaaa 37332290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 46845582 - 46845531
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaag 419  Q
    ||||||||||||| ||||||| |||||||| || ||||||||||||||||||    
T  46845582 caactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 46845531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 50364211 - 50364311
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||| |||  ||||||||||||||| || | |||||||| || |||||||| |||||||     ||| ||||||||||||||| |||||||||    
T  50364211 attgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaag----ttacatatttaatataaaaaacacaagtt 50364306  T
Q  452 ccaag 456  Q
    |||||    
T  50364307 ccaag 50364311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 2379227 - 2379162
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagt 420  Q
    |||| ||||||||| ||||||||||||||||| |||| |||||| ||   |||||||||||||||||||    
T  2379227 attgcacatgttaaaacaactaaaagtagtaagtttttattgaataa---caattatttattaaaaagt 2379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 27549555 - 27549631
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaa---tttttcattgaaaaacatcaattatttattaaaaagtta 422  Q
    ||||||| ||||||||| |||||||||||||||||   ||||| ||| ||| ||||||||||||| | |||||||||    
T  27549555 aacattgcacatgttaaaacaactaaaagtagtaatattttttaattaaaatacatcaattatttgtcaaaaagtta 27549631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 514
Target Start/End: Complemental strand, 35414929 - 35414808
Alignment:
Q  390 attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtc 489  Q
    ||||||||||| ||||||||| || |||||||||   ||||| |||| |||| | |||| |||||| ||||| |||  ||||  ||  | |||||||||     
T  35414929 attgaaaaacaacaattatttgttcaaaagttat---atattaaatacaaaatatacaacttccaatataaagttactattttgaacttcttaacatgtg 35414833  T
Q  490 aaaatttgcacatgatagaaaaact 514  Q
     ||||||||||||||||||||||||    
T  35414832 taaatttgcacatgatagaaaaact 35414808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 38785924 - 38786000
Alignment:
Q  376 agtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaa 455  Q
    |||||||||||||  |||||||||| ||||||||||||  ||||   || |||||||||||||||||  |||||||||||    
T  38785924 agtagtaatttttttttgaaaaacaacaattatttatttgaaag---ttttatatttaatataaaacgtacaagttccaa 38786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 357 - 512
Target Start/End: Original strand, 40497073 - 40497224
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||| |||||||||||||||| |||| |||| ||| || |||||| ||||||||||     || ||| |||||||||||  ||||||||| |||    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattg-aaatcaacaattaattattaaaaa---tctacatagttaatataaaatgcacaagttctaag 40497168  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
     |||| |||  | || |||  | ||| |||||  ||||||||||||||||||||||    
T  40497169 ttaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 51567979 - 51567906
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaa-tttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||| ||||||||| |||||||| |||||||| |||||  ||| |||||| |||||||||||| |||||||    
T  51567979 aacattgcacatgttaaaacaactaatagtagtaacttttttcttggaaaacaacaattatttattcaaaagtt 51567906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 20871254 - 20871297
Alignment:
Q  242 tttagctttgtaatccaaactcaagttaagaattcttcttacctt 286  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  20871254 tttagctttgtaatccaaactcaagttaagagttc-tcttacctt 20871297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 423
Target Start/End: Original strand, 47386958 - 47387014
Alignment:
Q  368 caactaaaagtagtaatttttcattg-aaaaacatcaattatttattaaaaagttat 423  Q
    |||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||||    
T  47386958 caactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagttat 47387014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 53537128 - 53537080
Alignment:
Q  373 aaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  53537128 aaaaatagtaactttacattgaaaaacaacaattatttattaaaaagtt 53537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 513
Target Start/End: Complemental strand, 40330378 - 40330295
Alignment:
Q  430 tttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||||||   ||||||||||||||||| |||  |||| |||  |||||||||||  ||||| ||||||||| |||||||    
T  40330378 tttaatataaaatgaacaagttccaagataaaattactattttaaattttttaacatgtacaaattcgcacatgattgaaaaac 40330295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 513
Target Start/End: Original strand, 23523038 - 23523124
Alignment:
Q  427 atatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||||| |||  |||||||||||||  ||| ||| || || |||  | |||||||||  |||||||||||||||||||||||    
T  23523038 atatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 23523124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 24086989 - 24087070
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||||  ||||||| |||| |||| |||||||| |||||||| ||||  || ||||||| |||||||||||| ||||    
T  24086989 tctaacatgtgcaacattgcacatcttaaaacaactaacagtagtaaatttttcttaaaaaacaacaattatttattcaaaa 24087070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 513
Target Start/End: Original strand, 29686367 - 29686498
Alignment:
Q  378 tagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaa 477  Q
    |||||| |||||| |||| | || ||||||||||||||||  |    |||||| |||||||||| |||||||||| ||| |||| |||  | || |||      
T  29686367 tagtaacttttcactgaatatcaacaattatttattaaaagct----atatatgtaatataaaaaacacaagttctaagttaaagttactactttaaact 29686462  T
Q  478 ttttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | ||| |||||  |||||||||||||||||||||||    
T  29686463 tcttatcatgtgcaaatttgcacatgatagaaaaac 29686498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 30214156 - 30214103
Alignment:
Q  363 taagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| ||||||||| |||||| ||||||||||||| || ||||||||||||||||    
T  30214156 taaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaa 30214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 37444167 - 37444232
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||| |||||||||| |||||||||||||||| |||| |||| ||| || |||||| ||||||||||    
T  37444167 attgcacatgttaaggcaactaaaagtagtaactttttattg-aaatcaacaattaattattaaaaa 37444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 423
Target Start/End: Original strand, 49396388 - 49396442
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    |||||||| ||  ||||||| ||||||||||  ||||||||||||||||||||||    
T  49396388 aactaaaaataacaatttttgattgaaaaactacaattatttattaaaaagttat 49396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 23803180 - 23803104
Alignment:
Q  376 agtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaa 455  Q
    |||||||| ||||  |||||||||| |||||||||||| |||||   || |||||||||||| ||| | |||||||||||    
T  23803180 agtagtaactttttcttgaaaaacaacaattatttattcaaaag---ttttatatttaatatgaaatatacaagttccaa 23803104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 29932441 - 29932400
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  29932441 tatatatttaatgtaaaatacacaagttccaatataaactta 29932400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 29981595 - 29981554
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  29981595 tatatatttaatgtaaaatacacaagttccaatataaactta 29981554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 43750072 - 43750117
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaa 397  Q
    |||| ||||||||||||| |||||||||||||| ||||| ||||||    
T  43750072 attgcacatgttaagacatctaaaagtagtaatgtttcactgaaaa 43750117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 512
Target Start/End: Complemental strand, 1569322 - 1569191
Alignment:
Q  378 tagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaa 477  Q
    ||||||||||| ||| ||||||| |||| |||||||| ||||   ||| |||| ||||||||||   ||||||||||| | ||| |||| |||| |||      
T  1569322 tagtaattttttattaaaaaacaacaataatttattagaaag---ttacatatctaatataaaatgaacaagttccaatacaaagttattattttaaact 1569226  T
Q  478 ttttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | |||||||||   |||||  ||||||||||||||    
T  1569225 tcttaacatgtacgaatttatacatgatagaaaaa 1569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 26486525 - 26486439
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||||||  |||||||||||||||  || | ||| |||||||   |||||||||||||||   | |||||||||||||||||| |||||||||    
T  26486525 atgttaaagcaactaaaagtagtagcttattattaaaaaaca---attatttattaaaaa---actatatatttaatataaaatacacaagtt 26486439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 514
Target Start/End: Complemental strand, 48346450 - 48346364
Alignment:
Q  426 tatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||||||||||||||  |||||||||||| | ||||||| ||||| |||  | |||||||||  |||||| ||||| |||||||||||    
T  48346450 tatatttaatataaaat-cacaagttccaaaacaaacttaccattttaaat-tgttaacatgttcaaatttacacattatagaaaaact 48346364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 512
Target Start/End: Complemental strand, 16667568 - 16667385
Alignment:
Q  328 attaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttatta 425  Q
    |||||| ||| ||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    ||    
T  16667568 attagggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaag---cta 16667472  T
Q  426 tatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
     ||||||||||||||| ||||||||| |||| |||| ||||||||| |||  | |||||||||  ||||||||||||||||||||||    
T  16667471 catatttaatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 349 - 514
Target Start/End: Complemental strand, 47327053 - 47326891
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||   | || ||||||||||| |||  || ||    
T  47327053 aacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaa---actacatatttaatatgaaatgcaaaa 47326957  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||||||  ||| ||| || || |||  | |||||||||  ||||||||||||||||||||||||    
T  47326956 gttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 47326891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 349 - 514
Target Start/End: Complemental strand, 47341849 - 47341687
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||   | || ||||||||||| |||  || ||    
T  47341849 aacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaa---actacatatttaatatgaaatgcaaaa 47341753  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||||||  ||| ||| || || |||  | |||||||||  ||||||||||||||||||||||||    
T  47341752 gttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 47341687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 328 - 513
Target Start/End: Complemental strand, 54495821 - 54495637
Alignment:
Q  328 attaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttatta 425  Q
    |||||| ||| ||||||||||  ||||||| ||||||||||| | ||||||||||||||||||  ||||||||||  | |||||||||||||||    ||    
T  54495821 attagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaag---cta 54495725  T
Q  426 tatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||||||||| |||  ||||||||||||| |||| ||| || || |||  | |||||||||  |||||||||||||||||||||||    
T  54495724 catatttaatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 54495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 514
Target Start/End: Original strand, 23545481 - 23545655
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||||||||  |||||||||| |||||||||||| |||||   || |||||||||||    
T  23545481 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaag---ttttatatttaata 23545577  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    | |||   |||| |||||| | ||| ||   |||| |||  | |||||||||  ||||||||||||||||||||||||    
T  23545578 ttaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatgatagaaaaact 23545655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 339 - 513
Target Start/End: Complemental strand, 8736983 - 8736811
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||||||  | ||||||||||||||||||    ||||||||||    
T  8736983 tctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttac---atatttaata 8736887  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  |||| ||||||||  ||| ||| || || |||  | |||||||||  |||||| |||| |||||||||||    
T  8736886 tgaaatgcaca-gttccaagtcaaagttaccactttaaatttcttaacatgtgcaaatttacacacgatagaaaaac 8736811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 513
Target Start/End: Complemental strand, 29190966 - 29190816
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||||  ||||||||||||||||||||||||||||| || |||||||| ||||||    | ||  ||||||||||| ||| ||||||||||||||      
T  29190966 atgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaa----tgttgcatatttaatattaaaaacacaagttccaagtc 29190871  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  29190870 aaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 29190816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 368 - 513
Target Start/End: Original strand, 2096907 - 2097049
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatc 467  Q
    |||||||||||   || |||| ||||||||||| ||||||||||||||||||   |||||||||||||||||||  |||||||||||| | ||||||| |    
T  2096907 caactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaag---ttatatatttaatataaaatgcacaagttccaatacaaacttacc 2097003  T
Q  468 atttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||  ||  | |||||||||  |||||| |||| |||| ||||||    
T  2097004 attttgaacttcttaacatgtgcaaattttcacaggataaaaaaac 2097049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 513
Target Start/End: Original strand, 27362408 - 27362569
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| | ||||||||| | |||||||||||||||||| |||||||||||  | |||||||| ||||||    || ||||||||||| |||  |||||    
T  27362408 aacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaag---ctacatatttaatatgaaatgcacaa 27362504  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     |||||||  ||| ||| || || |||  | |||||||||  |||||||||||||||||||||||    
T  27362505 attccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 27362569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 352 - 451
Target Start/End: Original strand, 6875521 - 6875617
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||| |||||||||| ||||||| ||| |||| |||| |||||||||||||| |||||   ||||| ||||||||||||| |||||||||    
T  6875521 attgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaag---ttataaatttaatataaaatacacaagtt 6875617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 51070520 - 51070399
Alignment:
Q  386 tttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaaca 485  Q
    ||||||||||||||| |||| |||||||||||||   ||||||||||||||||||| ||||||||| ||| | ||||||| ||||| |||  | |||||     
T  51070520 tttcattgaaaaacaccaatcatttattaaaaag---ttatatatttaatataaaatacacaagttacaaaacaaacttaccattttaaatttcttaac- 51070425  T
Q  486 tgtcaaaatttgcacatgatagaaaaa 512  Q
     ||  |||||| |||||||||||||||    
T  51070424 -gtgcaaattttcacatgatagaaaaa 51070399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 513
Target Start/End: Original strand, 25843316 - 25843472
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa--cacacaagttcca 454  Q
    |||||||||  |||||||||||||||| |||| ||||||||||| |||  |||| ||||||||   |||||||||||||||||||  |||| |||||| |    
T  25843316 acatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaag--cttatatatttaatataaaatgcacaaaagttcta 25843413  T
Q  455 agataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| ||| |||  | || |||  ||||||||| |  |||||||||| ||||||||||||    
T  25843414 agacaaagttactactttaaactttttaacatctacaaatttgcacgtgatagaaaaac 25843472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 17409829 - 17410002
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  |||||||||| |||||||||||| ||||   | | |||||||||||    
T  17409829 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaa---aatttatatttaata 17409925  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||||||| | ||| ||   |||| |||  | ||| |||||  |||||||||||||||||||||||    
T  17409926 ttaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 17410002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 513
Target Start/End: Complemental strand, 19451073 - 19450900
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||   || |||||||||||    
T  19451073 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaag---ttttatatttaata 19450977  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||||||| | ||| ||   |||| |||  | |||||||||  |||||||||||| ||||||||||    
T  19450976 ttaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 19450900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 513
Target Start/End: Complemental strand, 33632375 - 33632203
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||  |||||| || |||||||| |||||||| ||||  |||||||||| |||||||||||| |||||   || |||||||||||    
T  33632375 tctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaag---ttttatatttaata 33632279  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||| ||| ||||| || | |||| |||  |||||||||||  ||||| |||||||||||||||||    
T  33632278 ttaaatgtacaagtttcaatataaatttct-attttaaactttttaacatgtgcaaattcgcacatgatagaaaaac 33632203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 451
Target Start/End: Original strand, 7349709 - 7349804
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||| ||| ||||||||||||| || ||||||||| ||||||     ||| ||||||||||||||| |||||||||    
T  7349709 attgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaag----ttacatatttaatataaaaaacacaagtt 7349804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 349 - 513
Target Start/End: Original strand, 27019277 - 27019438
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||   || |||||||||||| |||   ||||    
T  27019277 aacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaag---ttttatatttaatattaaatgtacaa 27019373  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| ||| | ||| ||   |||| |||  ||||||||| |  |||||||||||||||||||||||    
T  27019374 gtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatgatagaaaaac 27019438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 39539481 - 39539551
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaag 419  Q
    ||||||| ||||| ||||||| |||||  ||||||||||||||||||||||| || |||||||||||||||    
T  39539481 aacattgcacatgctaagacatctaaacttagtaatttttcattgaaaaacaacacttatttattaaaaag 39539551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 27298938 - 27298982
Alignment:
Q  379 agtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  27298938 agtaatttttcattgaaaaacaccaattatttattaaaaagttat 27298982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 42479982 - 42479894
Alignment:
Q  423 ttatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    |||||||||| ||||||||  |||||||||||||| ||| ||||||| | |||  | |||||||||  |||||||||||||||||||||    
T  42479982 ttatatatttgatataaaatgcacaagttccaagacaaatttatcatattaaatttcttaacatgtgcaaatttgcacatgatagaaaa 42479894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 514
Target Start/End: Original strand, 53961360 - 53961501
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||    | ||| ||||||||||||||| |||||| || ||||  ||| |||  |    
T  53961360 aactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaa----tgttacatatttaatataaaaaacacaaatttcaagtcaaaattacta 53961455  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
     || |||  | |||||||||  ||||||||||| ||||||||||||    
T  53961456 atttaaacttcttaacatgtgcaaatttgcacacgatagaaaaact 53961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 19468199 - 19468372
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||   || |||||||||||    
T  19468199 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaag---ttttatatttaata 19468295  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||| ||| | ||| ||   |||| |||  | |||||||||  |||||||||||| ||||||||||    
T  19468296 ttaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 19468372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 49181092 - 49181250
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  |||||||||||| ||  ||| ||||||||||| |||| ||||||| |||||   ||| |||||||||||||||  ||||||||    
T  49181092 attgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaag---ttacatatttaatataaaatgcacaagtt 49181188  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||| | ||| |||  ||||  ||  | |||||| ||  |||||||||||||||||||||||    
T  49181189 acaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaac 49181250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 513
Target Start/End: Complemental strand, 9327002 - 9326865
Alignment:
Q  377 gtagtaatttttcattgaaaaaca---tcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaa 473  Q
    ||||||| |||||||||||||| |   ||||||||| ||||||||||| |    ||||||||||| || |||||||||||||||||||||| |||||| |    
T  9327002 gtagtaacttttcattgaaaaatagtatcaattatt-attaaaaagttgtc---tatttaatatagaatacacaagttccaagataaacttgtcatttta 9326907  T
Q  474 aaaattttaacatgtcaaaa--tttgcacatgatagaaaaac 513  Q
    ||  | |||||||||  |||  ||||||||||||||| ||||    
T  9326906 aatttcttaacatgtgcaaatttttgcacatgatagagaaac 9326865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 513
Target Start/End: Complemental strand, 9373724 - 9373587
Alignment:
Q  377 gtagtaatttttcattgaaaaaca---tcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaa 473  Q
    ||||||| |||||||||||||| |   ||||||||| ||||||||||| |    ||||||||||| || |||||||||||||||||||||| |||||| |    
T  9373724 gtagtaacttttcattgaaaaatagtatcaattatt-attaaaaagttgtc---tatttaatatagaatacacaagttccaagataaacttgtcatttta 9373629  T
Q  474 aaaattttaacatgtcaaaa--tttgcacatgatagaaaaac 513  Q
    ||  | |||||||||  |||  ||||||||||||||| ||||    
T  9373628 aatttcttaacatgtgcaaatttttgcacatgatagagaaac 9373587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 513
Target Start/End: Complemental strand, 9382036 - 9381899
Alignment:
Q  377 gtagtaatttttcattgaaaaaca---tcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaa 473  Q
    ||||||| |||||||||||||| |   ||||||||| ||||||||||| |    ||||||||||| || |||||||||||||||||||||| |||||| |    
T  9382036 gtagtaacttttcattgaaaaatagtatcaattatt-attaaaaagttgtc---tatttaatatagaatacacaagttccaagataaacttgtcatttta 9381941  T
Q  474 aaaattttaacatgtcaaaa--tttgcacatgatagaaaaac 513  Q
    ||  | |||||||||  |||  ||||||||||||||| ||||    
T  9381940 aatttcttaacatgtgcaaatttttgcacatgatagagaaac 9381899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 49332358 - 49332424
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    ||||||||||  || |||||||| ||| |||||||||||||| || |||||||||||||||||||||    
T  49332358 acatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaaagttat 49332424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 514
Target Start/End: Original strand, 1378081 - 1378196
Alignment:
Q  395 aaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaat 494  Q
    |||||||||||||||||||||||   | ||||||||||||||| |||   ||||||| ||||||||| ||| ||||| |||  | |||||||||  |||     
T  1378081 aaaacatcaattatttattaaaa---tgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgtgcaaa- 1378176  T
Q  495 ttgcacatgatagaaaaact 514  Q
    |||||| |||||||||||||    
T  1378177 ttgcacctgatagaaaaact 1378196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 512
Target Start/End: Original strand, 52391323 - 52391475
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||| | |||||| |||||||| ||||  |||||||||| |||||||||||| |||||   || |||||||||||| |||   |||||||||||     
T  52391323 acatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaag---ttttatatttaatattaaatgtacaagttccaat 52391419  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | ||| ||   |||| |||  | |||||||||  |||||| |||||||||||||||    
T  52391420 acaaaatttctattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 24297390 - 24297461
Alignment:
Q  350 acattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||||| | ||||||| |||| ||| |||||||||||||  |||||||||| |||||||||||| |||||||    
T  24297390 acattgcatatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttatttaaaagtt 24297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 423
Target Start/End: Complemental strand, 42480064 - 42480009
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    ||||||| ||||| ||  ||| ||||||||||||||||||||||||||||||||||    
T  42480064 caactaagagtagcaacattttattgaaaaacatcaattatttattaaaaagttat 42480009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 16069341 - 16069299
Alignment:
Q  376 agtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  16069341 agtagtaattttttattgaaaaacaacaattatttattaaaaa 16069299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 451
Target Start/End: Complemental strand, 36000097 - 36000002
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| |||| |||||||| || |||||||| |||||||      || ||||||||||||||| |||||||||    
T  36000097 attgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaa----gctacatatttaatataaaaaacacaagtt 36000002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 41415703 - 41415649
Alignment:
Q  363 taagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| |||||||||||||||| |||| |||||||| || ||||||||||||||||    
T  41415703 taaggcaactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaa 41415649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 513
Target Start/End: Original strand, 51691359 - 51691519
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| |||||||||  ||||||||| |||||| | || ||||||||  |  ||||||||||||||||| |||   |||||||||  |||| | ||||    
T  51691359 aacattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctat---atatttaattcaaaatatacaa 51691454  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||||   ||| |||  ||||||||  | |||||||||  |||||| ||||||||||||||||    
T  51691455 gttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaac 51691519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 3085357 - 3085441
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||| ||||||||| |||| ||| |||||||||||||  |||||||| | ||||||| |||| |||||||    
T  3085357 tctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaattttttcttgaaaaataacaattatatattcaaaagtt 3085441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 34941292 - 34941369
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    ||||| |||| |||| |||||  |||||||||||  || |||| ||||||||||| ||| ||||||||||||||||||    
T  34941292 tgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttat 34941369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 53376535 - 53376408
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaa 483  Q
    ||||| ||||||||||| |||| |||||||||||||||| |||| |||||||||||||  |||| |||  || | |||||| | |||| |||  | ||||    
T  53376535 ttttttattgaaaaacaacaatcatttattaaaaagtta-tata-atttaatataaaatgcacaggttttaatacaaacttcttattttaaacttcttaa 53376438  T
Q  484 catgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  |||||| ||||||||| ||||||    
T  53376437 catgtgcaaattttcacatgataaaaaaac 53376408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 455
Target Start/End: Complemental strand, 13009916 - 13009813
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| | ||||||| ||||||||||||| ||| |||| ||||||||  |  ||||||||| |||||||    ||||||||||||| |||| | ||||    
T  13009916 aacattgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaag---ctatatatttaatacaaaatatacaa 13009820  T
Q  449 gttccaa 455  Q
    |||||||    
T  13009819 gttccaa 13009813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 510
Target Start/End: Original strand, 24684861 - 24685012
Alignment:
Q  357 acatgttaagacaactaaaagtagtaa-tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaa 455  Q
    ||||||||| |||||||| |||||||| |||||  ||| |||||| |||||||||||| |||||   || |||||||||||| |||   |||||||||||    
T  24684861 acatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaag---ttttatatttaatattaaatgtacaagttccaa 24684957  T
Q  456 gataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaa 510  Q
       ||| ||   |||| |||  | |||||||||  ||||||||||||||||||||    
T  24684958 tgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 35645127 - 35645073
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    ||||| ||||||||| | ||||||||||||||||||   |||||||||||||||||||    
T  35645127 ttttttattgaaaaataacaattatttattaaaaag---ttatatatttaatataaaa 35645073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 10813645 - 10813587
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||||||| |||||||||||| ||| |||| |||||||| || ||||||||| ||||||    
T  10813645 atgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaa 10813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 27756582 - 27756690
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||| |||| || ||| ||||| |||||| |||||||| |||||||||||||    ||||||||||| || | |||||||    
T  27756582 attgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattatt-attaaaaagttatc---tatttaatatagaatatacaagtt 27756677  T
Q  452 ccaagataaactt 464  Q
     ||||| ||||||    
T  27756678 tcaagacaaactt 27756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 38222323 - 38222392
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    |||||||||||  || |||| | |||||| || |||||||||||||||||   ||||||||||||||||||||    
T  38222323 aactaaaagtaacaaatttttagtgaaaatcaacaattatttattaaaaa---attatatatttaatataaaa 38222392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 417
Target Start/End: Original strand, 23438192 - 23438241
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||||||| ||||||| |||| ||||||||||| |||| |||||||||||    
T  23438192 caactaaatgtagtaactttttattgaaaaacaacaataatttattaaaa 23438241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 32459419 - 32459460
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  32459419 tatatatttaatgtaaaatacacaagttccaatataaactta 32459460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Complemental strand, 37785001 - 37784948
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtta 422  Q
    |||||||||||| || |||| |||||||||||  ||| ||||||||||||||||    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagtta 37784948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 43759556 - 43759515
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  43759556 tatatatttaatgtaaaatacacaagttccaatataaactta 43759515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 416
Target Start/End: Original strand, 49228384 - 49228441
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaa 416  Q
    ||||||||  ||||||||||||||| ||||||||||||| || ||||| || ||||||    
T  49228384 atgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaa 49228441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 33559271 - 33559314
Alignment:
Q  402 caattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||    
T  33559271 caattatttattaaaaa---attatatatttaatataaaatacacaa 33559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 417
Target Start/End: Complemental strand, 48910942 - 48910894
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||||||||||||||||||| ||||||||  | |||||||| |||||||    
T  48910942 aactaaaagtagtaattttttattgaaaattaacaattattgattaaaa 48910894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 512
Target Start/End: Original strand, 55813922 - 55814041
Alignment:
Q  390 attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtc 489  Q
    |||||||| || ||||||||||||||||||||||   |||||||||| | ||   |||| || ||| | ||| |||| |||| |||  |||||||||||     
T  55813922 attgaaaatcaacaattatttattaaaaagttat---atatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtg 55814018  T
Q  490 aaaatttgcacatgatagaaaaa 512  Q
     ||||||||| |||||| |||||    
T  55814019 caaatttgcatatgatacaaaaa 55814041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 352 - 470
Target Start/End: Original strand, 19868134 - 19868249
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  19868134 attgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaag---ttatatatttaatataaaatacacaagtt 19868230  T
Q  452 ccaagataaacttatcatt 470  Q
     ||||| ||||||| ||||    
T  19868231 tcaagacaaacttaccatt 19868249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 512
Target Start/End: Complemental strand, 7899617 - 7899487
Alignment:
Q  379 agtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaat 478  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||   ||||||||||||||| | |||||||  |||| ||||||| ||||| |||  |    
T  7899617 agtaatttttcattgaaaaacaccaataatttattaaaatgttat---atatttaatataaaatatacaagttataagacaaacttaccattttaaattt 7899521  T
Q  479 tttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    ||||||||||  ||||||||||||||||||||||    
T  7899520 tttaacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 19889361 - 19889518
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||     ||| ||||||||||||||| |||||||||    
T  19889361 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacacaagtt 19889456  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||||    
T  19889457 ccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 19889518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 39757267 - 39757110
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||| || |||||||| |||||||      || ||||||||||||||| |||||| ||    
T  39757267 attgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaa----gctacatatttaatataaaaaacacaaatt 39757172  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     |||| |||| |||  |||| |||  | |||||||||  |||||||||||||||||||||||    
T  39757171 tcaagttaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 39757110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 513
Target Start/End: Complemental strand, 8420959 - 8420833
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaa 483  Q
    ||||| ||| |||| ||||||||||||||||||||||| |   ||||||||||||||| |||||||||  |||||||||||| ||||| |||  ||||||    
T  8420959 ttttttattaaaaagcatcaattatttattaaaaagttgt---atatttaatataaaagacacaagttataagataaacttaccattttaaattttttaa 8420863  T
Q  484 catgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  |||||||  ||||||||||||||    
T  8420862 catgtacaaatttgttcatgatagaaaaac 8420833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 513
Target Start/End: Complemental strand, 23982908 - 23982755
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||| |||||||||||||||| |||||||| |||| || |||||| ||||||||||    ||| ||||||||||||||| ||||||||||||||    
T  23982908 acatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaa---cttaaatatttaatataaaatacacaagttccaag 23982812  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
      ||| |||  | || |||  | ||||| |||  |||||||||||||||||||||||    
T  23982811 tcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaac 23982755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 9331982 - 9332139
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| ||||||    | ||| ||||||||||||||| |||||||||    
T  9331982 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaa----tgttacatatttaatataaaaaacacaagtt 9332077  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  9332078 tcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 9332139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 456
Target Start/End: Complemental strand, 12086094 - 12085988
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacaca 445  Q
    ||||| |||| |||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||||||||     ||| ||||||||||||||| |||    
T  12086094 tgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaag----ttaaatatttaatataaaaaaca 12085999  T
Q  446 caagttccaag 456  Q
    |||||| ||||    
T  12085998 caagtttcaag 12085988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 25709557 - 25709398
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||  ||||||||||||||||||||| ||||| ||||| |||| |||||||||||||    ||  |||||||||| |||   |||||||    
T  25709557 attgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaag---ctacctatttaatatgaaatgaacaagtt 25709461  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    |||| | ||| |||  |||| |||  | |||||||||  ||||||||||||||||||||||||    
T  25709460 ccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 25709398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 32117835 - 32117992
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||| |||| || ||| ||||| |||||| |||||||| |||||||||||||    ||||||||||| || | |||||||    
T  32117835 attgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattatt-attaaaaagttatc---tatttaatatagaatatacaagtt 32117930  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||||||||||  || || |||  | |||||||||  |||||||||||||||||||||||    
T  32117931 tcaagataaacttgccactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32117992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 456
Target Start/End: Complemental strand, 47120351 - 47120251
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||| |  ||||||||||||||||||||||||||||| || |||||||| ||||||    | ||| ||||||||||||||| |||||||||    
T  47120351 attgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaa----tgttacatatttaatataaaaaacacaagtt 47120256  T
Q  452 ccaag 456  Q
    |||||    
T  47120255 ccaag 47120251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 352 - 522
Target Start/End: Complemental strand, 5909439 - 5909273
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||| ||||| ||||||||||||| || ||||||||||||||||      || ||||||||||||||| |||||||||    
T  5909439 attgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaa----gctacatatttaatataaaaaacacaagtt 5909344  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaactgataaaat 522  Q
     ||||  ||| |||  | || |||  | ||| |||||  |||||| ||||||||||||||||  |||||||    
T  5909343 tcaagtcaaagttactactttaaacttcttatcatgtgcaaatttacacatgatagaaaaacccataaaat 5909273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 12650841 - 12650912
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    |||| |||||||||| ||||||||| |||||| |||||||||||||  | ||||||||||||||||||||||    
T  12650841 attgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagttat 12650912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 513
Target Start/End: Complemental strand, 3562068 - 3561878
Alignment:
Q  321 taataaaattaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||  ||| ||| ||||||||||  || |||| ||||||||||  ||||||||| ||||| ||||||||||||| ||  ||||||| |||||||     
T  3562068 taataaaaaaaggatttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaa- 3561970  T
Q  419 gttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
         || ||||||||||||||| |||||||||  ||| |||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  3561969 ---gctacatatttaatataaaaaacacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 422
Target Start/End: Original strand, 24699156 - 24699225
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtta 422  Q
    |||| |||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||| |||||||    
T  24699156 attgcacatgttaagactactaaaa-tagtaacttttcattgaaaaacaacaattatttattataaagtta 24699225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 31066903 - 31066800
Alignment:
Q  343 acatgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaac 442  Q
    ||||||||||||| ||||||||| | || |||||||||||| |||| ||| |||||||  || |||||||||||||   ||||||||||| ||||||||     
T  31066903 acatgtaacattgcacatgttaaaataagtaaaagtagtaactttttattaaaaaacaagaactatttattaaaaa--aattatatatttgatataaaat 31066806  T
Q  443 acacaa 448  Q
    ||||||    
T  31066805 acacaa 31066800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 2276719 - 2276791
Alignment:
Q  376 agtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||||||| | |||||||||||||| ||||||||||||||||||   |||| |||||||||||||| |||||||||    
T  2276719 agtagtaactcttcattgaaaaacaccaattatttattaaaaag---ttatctatttaatataaaatacacaagtt 2276791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 514
Target Start/End: Complemental strand, 384570 - 384430
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    ||||||||||||||| ||||||||||||| || |||||||| |||||||      || ||||||||||||||| | |||||||||||| |||| |||  |    
T  384570 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa----gctacatatttaatataaaaaaaacaagttccaagttaaagttacta 384475  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
     || |||  | |||||||||  ||||||||| ||||||||||||||    
T  384474 ctttaaacttcttaacatgtgcaaatttgca-atgatagaaaaact 384430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 36548617 - 36548532
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    |||| ||||||||||  |||||||||||||||||||| |||||||| || |||||||| ||||||    ||||| |||||||||||||||    
T  36548617 attgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaa----tattacatatttaatataaaa 36548532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 511
Target Start/End: Complemental strand, 18102364 - 18102232
Alignment:
Q  376 agtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatat-aaaacacacaagttccaagataaacttatcatttaaa 474  Q
    |||||||||||||||||||||| || |||||||| ||||||    | ||| ||||||||||| |||| ||||||||| ||||  ||| |||| | || ||    
T  18102364 agtagtaatttttcattgaaaatcaacaattattgattaaa----tgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaa 18102269  T
Q  475 aaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    |  | |||||||||  |||||||||||||||||||||    
T  18102268 acttcttaacatgtgcaaatttgcacatgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 369 - 497
Target Start/End: Original strand, 12624675 - 12624798
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    |||||||| |||| |||||| ||||||||| |||||||||||||||||||    || |||||||||||||||| |||||||||  |||| ||||||| ||    
T  12624675 aactaaaa-tagttattttttattgaaaaatatcaattatttattaaaaa---cttgtatatttaatataaaatacacaagtt-taagacaaacttacca 12624769  T
Q  469 tttaaaaaattttaacatgtcaaaatttg 497  Q
    ||| |||  | |||||||||  |||||||    
T  12624770 ttttaaatttcttaacatgtgcaaatttg 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 330 - 417
Target Start/End: Original strand, 24250310 - 24250399
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| ||| ||||||||||  || |||| ||||||||||  ||||||||||| ||| ||||||||||||| || ||||||||||||||||    
T  24250310 tagggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaa 24250399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 44806959 - 44807020
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||||||||||||  ||||||||||| ||||||| |||||||||  ||||||||||||||||    
T  44806959 acatgttaagacatttaaaagtagtattttttcactgaaaaacaataattatttattaaaaa 44807020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 514
Target Start/End: Original strand, 45501464 - 45501638
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| | |||||| |||||||| ||||  || ||||||| |||||||||||| || ||   || |||||||||||    
T  45501464 tctaacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacag---ttttatatttaata 45501560  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    | |||   ||||||||||| | ||| ||   |||| |||  | |||| ||||  ||||||||||||||||||||||||    
T  45501561 ttaaatgtacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaatttgcacatgatagaaaaact 45501638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 8091474 - 8091399
Alignment:
Q  348 taacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    |||||||| |||||| ||  ||||||||||||| || |||| |||||||| ||  |||||||||||||||||||||    
T  8091474 taacattgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttat 8091399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 11680144 - 11680090
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    ||||| ||||||||||| ||||||||||||||||||   |||||||||||||||||||    
T  11680144 tttttaattgaaaaacaacaattatttattaaaaag---ttatatatttaatataaaa 11680090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 357 - 510
Target Start/End: Complemental strand, 24463107 - 24462958
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||| ||||||||||||||||||| | |||| |||||| ||| |||||||||||||   | || |||||||||||||||   ||||  |  |||    
T  24463107 acatgttaaggcaactaaaagtagtaatttcttattg-aaaacaacaagtatttattaaaaa---actacatatttaatataaaatgtacaaactttaag 24463012  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaa 510  Q
      ||| |||| |||| |||  | |||||||||  ||||||||||||||||||||    
T  24463011 tcaaagttattattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 33343009 - 33343166
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  |||||||||||| || |||| |||||||  || ||||||||||  ||||||||||   |||||||||| ||||    ||||||    
T  33343009 attgcacatgttaaggtaactaaaagtagcaagtttttattgaaac-caacaattatttaacaaaaagttat---atatttaatacaaaatgttcaagtt 33343104  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||| | ||| |||  |||| |||  | |||||||||  |||||||||||||||||||||||    
T  33343105 ccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 33343166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 28323172 - 28323311
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatc 467  Q
    ||||||||| ||| || |||| ||| ||||||| | ||| |||||||||||   |||||||||| |||||||||   | |||||| || ||||| ||||     
T  28323172 caactaaaactagcaagtttttatt-aaaaacagcgattttttattaaaaa---attatatattaaatataaaatgtataagttctaatataaaattatt 28323267  T
Q  468 atttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    |||| |||  |||||||||||  |||||| ||||||||||||||    
T  28323268 attttaaattttttaacatgtgtaaatttacacatgatagaaaa 28323311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 512
Target Start/End: Complemental strand, 28061412 - 28061324
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    |||||||||||| ||||| ||||||||||||| |||||||||  | || |  |  ||||||||||  ||||||||||||| ||||||||    
T  28061412 tatatatttaatgtaaaatacacaagttccaatataaacttactactttagtatctttaacatgtgcaaatttgcacatgttagaaaaa 28061324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 400
Target Start/End: Complemental strand, 29398287 - 29398224
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaaca 400  Q
    ||||||||||  ||||||| ||||||||| |||||||| | || ||||||||||||||||||||    
T  29398287 tctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaaaca 29398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 47457619 - 47457461
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaat-ttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagt 450  Q
    |||| ||||||||| |||||||||||||||||| |||| |||| |||| | |||||||||||| |||||    || | || ||||||||||  || || |    
T  47457619 attgcacatgttaaaacaactaaaagtagtaatttttttattg-aaaataacaattatttatttaaaag---ctacacatataatataaaatgcataaat 47457524  T
Q  451 tccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||  ||| |||  | || |||  |||||||||||  |||||||||||||||||||||||    
T  47457523 tccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatgatagaaaaac 47457461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 421
Target Start/End: Complemental strand, 29692699 - 29692629
Alignment:
Q  351 cattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||| ||||||||| |||||||| | || ||||||||  ||| |||||| |||||||||||| |||||||    
T  29692699 cattgcacatgttaaaacaactaataatattaattttttcttggaaaacaacaattatttattcaaaagtt 29692629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 421
Target Start/End: Original strand, 38759975 - 38760037
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||| |||||||| | |||||| ||||  |||||||||| |||||||||||| |||||||    
T  38759975 atgttaaaacaactaataatagtaacttttttttgaaaaacaacaattatttattcaaaagtt 38760037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 39869143 - 39869209
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||| |||||||||   |||||||| |||||| ||||||||||||| || |||||| ||||||||||    
T  39869143 attgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaa 39869209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 512
Target Start/End: Complemental strand, 3530242 - 3530115
Alignment:
Q  381 taatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattt 480  Q
    |||||||| |||||||| || |||||||||||||||||   ||||||||||| ||||||||  ||||| || ||| | |||||||  |||  |||  | |    
T  3530242 taattttttattgaaaa-caacaattatttattaaaaa---attatatatttgatataaaatgcacaaatttcaataaaaacttactattctaaacgtct 3530147  T
Q  481 taacatgtcaaaatttgcacatgatagaaaaa 512  Q
    ||| ||||  |||||||||||||||| |||||    
T  3530146 taatatgtgtaaatttgcacatgatataaaaa 3530115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 38798159 - 38798118
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  38798159 tatatatttaatgtaaaatacacaagttccaatataaactta 38798118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 38798297 - 38798256
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  38798297 tatatatttaatgtaaaatacacaagttccaatataaactta 38798256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 42593483 - 42593442
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  42593483 tatatatttaatgtaaaatacacaagttccaatataaactta 42593442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 45645456 - 45645497
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  45645456 tatatatttaatgtaaaatacacaagttccaatataaactta 45645497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 27300466 - 27300514
Alignment:
Q  371 ctaaaagtagtaatttttc-attgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||||||||||||  |||||||||||| || |||||||||||||    
T  27300466 ctaaaagtagtaatttttttattgaaaaacattaactatttattaaaaa 27300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 439
Target Start/End: Original strand, 38554275 - 38554342
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataa 439  Q
    |||||||| | |||| |||| ||||||||||| ||||||| |||||||||    |||||||||||||||||    
T  38554275 aactaaaaatcgtaaatttttattgaaaaacaacaattatatattaaaaa---tttatatatttaatataa 38554342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 339 - 512
Target Start/End: Original strand, 6016861 - 6017033
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||| ||||||| ||||||||||||| |||||||||||||||| || |||||| ||||||||   ||||||||||||||    
T  6016861 tctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaag---ttatatatttaata 6016957  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | |||  |||||||||||||  ||| ||| || || |||  |||||||||||  ||||||||||||||||||||||    
T  6016958 tgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 6017033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 339 - 513
Target Start/End: Complemental strand, 18332861 - 18332688
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||| | |||||||||||||||||| |||||||||||  | |||||||||||||||    |||||||||||||    
T  18332861 tctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctatatatttaata 18332765  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  || ||||||||||  ||| |||||| || |||  | ||||||||| ||||||||||||||||||||||||    
T  18332764 tgaaatgcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatgatagaaaaac 18332688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 339 - 514
Target Start/End: Original strand, 10887034 - 10887208
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||| | |||||||||||||||||| |||||||||||  | |||||||||||||||    || ||||||||||    
T  10887034 tctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctacatatttaata 10887130  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||| |||||||||||||   ||| ||| || || |||  | |||||||||  ||||||||||||||||||||||||    
T  10887131 taaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaact 10887208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 357 - 512
Target Start/End: Complemental strand, 31069734 - 31069583
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||||  ||||||||||||||| |||| |||||||| || |||||||| ||||||    | ||| ||||||||||||||| ||||||||||||||    
T  31069734 acatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaa----tgttacatatttaatataaaaaacacaagttccaag 31069639  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
      ||| |||  | || |||  | |||||||||  ||||||||||||||||||||||    
T  31069638 tcaaagttactaatttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 2830838 - 2830681
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||      || ||||||||||||||| |||||| ||    
T  2830838 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaa----gctacatatttaatataaaaaacacaaatt 2830743  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | ||  |||| |||| |||| |||  | |||||||||  ||||||| |||||||||||||||    
T  2830742 ctaaattaaagttattattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 2830681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 461
Target Start/End: Complemental strand, 22974730 - 22974625
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||     ||| ||||||||||||||| |||||||||    
T  22974730 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag----ttacatatttaatataaaaaacacaagtt 22974635  T
Q  452 ccaagataaa 461  Q
    ||||| ||||    
T  22974634 ccaagttaaa 22974625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 461
Target Start/End: Original strand, 23813671 - 23813776
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||     ||| ||||||||||||||| |||||||||    
T  23813671 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag----ttacatatttaatataaaaaacacaagtt 23813766  T
Q  452 ccaagataaa 461  Q
    ||||| ||||    
T  23813767 ccaagttaaa 23813776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 514
Target Start/End: Complemental strand, 30591316 - 30591162
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||  |||||||| ||||||| |||| |||||||||   ||||||||||| ||||||||||   | |||||||| |||| | ||||||| |||     
T  30591316 acatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttat---acatttaatacaaaatatacaagttacaat 30591220  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
      ||| ||| |||||||||  | |||||||||  ||||||||||||||||||||||||    
T  30591219 gcaaaattaccatttaaaacttcttaacatgtgtaaatttgcacatgatagaaaaact 30591162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 461
Target Start/End: Complemental strand, 5363050 - 5362945
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || ||||| || |||||||      || ||||||||||||||| |||||||||    
T  5363050 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaa----gctacatatttaatataaaaaacacaagtt 5362955  T
Q  452 ccaagataaa 461  Q
    ||||| ||||    
T  5362954 ccaagttaaa 5362945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 12454086 - 12454243
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||| || |||| |||||||||||| |||||||| ||||||||| |  |||||||||| |    ||||||||||| || |||||||||    
T  12454086 attgcacatgttaagaaaattaaatgtagtaattttttattgaaaa-catcaattactatttaaaaagttgtc---tatttaatatagaatacacaagtt 12454181  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||| |  || ||| ||||| |||  |||||| ||||  |||||| || |||||||||||||    
T  12454182 ccaaaaccaatttaccattttaaattttttaaaatgtgcaaatttacatatgatagaaaaac 12454243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 34692359 - 34692532
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||   ||||||||||| |||||   || |||||||||||    
T  34692359 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaag---ttttatatttaata 34692455  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||||||| | ||| ||   |||| |||  | |||||||||  |||||||||||||||||||||||    
T  34692456 ttaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 34692532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 357 - 513
Target Start/End: Complemental strand, 31169916 - 31169763
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||| | ||||||| |||||||||||| ||||||| ||  ||||| ||||||||||     || |||||||||||||||  |||||||||||||    
T  31169916 acatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaa---cctacatatttaatataaaatgcacaagttccaag 31169820  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
      ||| |||  | || |||  | |||||||||  |||||| ||||||||||||||||    
T  31169819 tcaaagttactactttaaatttgttaacatgtgcaaatttacacatgatagaaaaac 31169763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 30623331 - 30623415
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||  ||||||||| |||||||| |||||||| ||||  |||||||||| |||||||||||| |||||||    
T  30623331 tctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagtt 30623415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 512
Target Start/End: Original strand, 31503831 - 31503919
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    |||||||||||||||||| ||||||||||||| |||||||||  | || |||  | |||||||||  ||||||||||||  ||||||||    
T  31503831 tatatatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatttgcacatattagaaaaa 31503919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 29863460 - 29863302
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   |||||||| |||||| ||| |||||||||| |  |||||||||||||||||   || |||| |||||||||||  || |||||    
T  29863460 attgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaag---ttttatagttaatataaaatgcaaaagtt 29863364  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    || | | ||  |||  |||| |||  | |||||||||  |||||||||||||||||||||||    
T  29863363 ccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 29863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 1017919 - 1017850
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    ||||||||||||||| ||||| ||||||| || |||||||||||||||||    ||| |||||||||||||||    
T  1017919 aactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaa---tttacatatttaatataaaa 1017850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 512
Target Start/End: Complemental strand, 8977624 - 8977467
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  |||||||||||| ||  ||| ||||||||||| |||| ||||||| |||||   ||| |||||||||||||||  ||||||||    
T  8977624 attgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaag---ttacatatttaatataaaatgcacaagtt 8977528  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
     ||| | ||| |||  ||||  ||  | |||||| ||  |||||| |||||||||||||||    
T  8977527 acaatacaaatttactattttgaacttcttaacaagtgcaaatttacacatgatagaaaaa 8977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 26602588 - 26602522
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||| |||| |||||  |||||||||||||||||||||| |||||| || |||||| ||||||||||    
T  26602588 attgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaattaattattaaaaa 26602522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 417
Target Start/End: Original strand, 3850577 - 3850637
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||||||||| ||||||||||||| || ||||||||||||| ||  ||||||| |||||||    
T  3850577 acatgttaaggcaactaaaagtagcaacttttcattgaaaatcaataattattcattaaaa 3850637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 440
Target Start/End: Original strand, 29730318 - 29730383
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaa 440  Q
    ||||| || ||| |||| ||||||||||| || |||||||||||||||   ||||||||||||||||||    
T  29730318 taaaattaataagtttttattgaaaaacaacagttatttattaaaaag---ttatatatttaatataaa 29730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 4371856 - 4371929
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatt-tttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||| ||||||||| |||||||| |||| ||||| |||  ||| |||||| |||||||||||| |||||||    
T  4371856 aacattgtacatgttaaaacaactaatagtaataattatttttttggaaaacaacaattatttattcaaaagtt 4371929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 34733790 - 34733749
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  34733790 tatatatttaatgtaaaatacacaagttccaatataaactta 34733749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 2086993 - 2086949
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaa 396  Q
    |||| ||||||||||  || |||||||||||||||||||||||||    
T  2086993 attgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 505
Target Start/End: Original strand, 17154662 - 17154793
Alignment:
Q  372 taaaagtagtaatttttc-attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatt 470  Q
    |||||||| ||||||||  |||||||||||  ||| | ||||||||||   |||||| |||||||||| || ||||||||| ||| | |||| ||| |||    
T  17154662 taaaagtattaatttttttattgaaaaacaataatcaattattaaaaa---attatacatttaatatagaatacacaagtttcaaaacaaacctattatt 17154758  T
Q  471 taaaaaattttaacatgtcaaaatttgcacatgat 505  Q
    | |||  |||||||||||  |||||| || |||||    
T  17154759 ttaaattttttaacatgtgtaaatttacaaatgat 17154793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 388
Target Start/End: Original strand, 17596333 - 17596369
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaattttt 388  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  17596333 attgcacatgttaagacaactaaaagtagtaactttt 17596369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 28757644 - 28757573
Alignment:
Q  352 attggacatgttaagacaactaaaagtagt-aatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    |||| |||||||||  ||| |||||||| | || |||| ||||||||| ||||||||||||||||||||||||    
T  28757644 attgcacatgttaaagcaattaaaagtatttaagtttttattgaaaaa-atcaattatttattaaaaagttat 28757573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 417
Target Start/End: Complemental strand, 32615626 - 32615552
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagta---gtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    ||||| |||| | ||||||||  |||||||||||   |||| ||||||||||||| ||||||||||| |||||||    
T  32615626 tgtaatattgcatatgttaaggtaactaaaagtactagtaacttttcattgaaaatcatcaattattgattaaaa 32615552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 513
Target Start/End: Complemental strand, 37287 - 37114
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||| | |||||||||||||||||| |||||||||||  | |||||||||||||||    || ||||||||||    
T  37287 tctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctacatatttaata 37191  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  |||||||||||||  ||| |||||| || |||  | |||||||||  |||||||||||||||||||||||    
T  37190 tgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 37114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 512
Target Start/End: Original strand, 9516628 - 9516758
Alignment:
Q  379 agtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaat 478  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||   ||||||||||||||| |||||||||  |||| ||||||| ||||| |||  |    
T  9516628 agtaacttttcattgaaaaacaccaattatttattaaaaagttat---atatttaatataaaatacacaagttataagagaaacttaccattttaaattt 9516724  T
Q  479 tttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
     |||||||||  |||||| |||||||||||||||    
T  9516725 cttaacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 30171884 - 30172057
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||||||  | |||||||||||||||    || ||||||||||    
T  30171884 tctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctacatatttaata 30171980  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  |||||||||||||  ||| ||| || || |||  | |||||||||  |||||||||||||||||||||||    
T  30171981 tgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 30172057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 30187425 - 30187598
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||||| |||||||||||||||||| |||||||||||  | |||||||||||||||    || ||||||||||    
T  30187425 tctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctacatatttaata 30187521  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  |||||||||||||  ||| ||| || || |||  | |||||||||  |||||||||||||||||||||||    
T  30187522 tgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 30187598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 317 - 513
Target Start/End: Original strand, 34801951 - 34802145
Alignment:
Q  317 ttgctaataaaattaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttatta 414  Q
    |||||||| || | ||| ||| ||||||||||  ||||||| ||||||||||| | |||||||||||||||||| |||||||||||  | ||||||||||    
T  34801951 ttgctaattaattaagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatta 34802050  T
Q  415 aaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||   | || ||||||||||| |||  |||||||||| ||| ||| ||| ||||| |||  | |||||||||  |||||||||||||||||||||||    
T  34802051 aaaa---actacatatttaatatgaaatgcacaagttcc-agacaaaattaccattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 34802145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 379 - 512
Target Start/End: Original strand, 35438762 - 35438892
Alignment:
Q  379 agtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaat 478  Q
    ||||| |||| ||||||||||| ||||| ||||||||||||||||   ||||||||||||||| |||||| ||  |||||||||||| ||||| |||  |    
T  35438762 agtaacttttaattgaaaaacaccaattgtttattaaaaagttat---atatttaatataaaatacacaaattataagataaacttaccattttaaattt 35438858  T
Q  479 tttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
     |||||||||  ||||||||||||||||||||||    
T  35438859 cttaacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 313770 - 313927
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  |||||||||||||||||||| |||||||| || |||||||| |||||||  |    | ||||||||||||||| |||||||||    
T  313770 attgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagct----acatatttaatataaaaaacacaagtt 313865  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| |||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  313866 ccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 339 - 514
Target Start/End: Original strand, 23591703 - 23591877
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| |||||||||  ||||||||| |||||| |||| |||||||| ||  |||||||||||||||||   ||||||||||||||    
T  23591703 tctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaag---ttatatatttaata 23591799  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
     ||||   |||||||||||   ||| || | ||||||||  | |||||||||  ||||||||||||||||||||||||    
T  23591800 caaaatgtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaact 23591877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 39150484 - 39150327
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||     ||| ||||||||||||||| |||||| ||    
T  39150484 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacacaaatt 39150389  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||||    
T  39150388 ccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 39150327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 17919474 - 17919631
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||     ||| ||||||||||||||| |||||| ||    
T  17919474 attgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacacaaatt 17919569  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  ||| |||  | || |||  | |||  ||||  |||||||||||||||||||||||    
T  17919570 ccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcacatgatagaaaaac 17919631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 512
Target Start/End: Original strand, 13241810 - 13241934
Alignment:
Q  385 ttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaac 484  Q
    ||||| ||||||||||  ||||||||||||||||   |||||||||||||||| ||| ||||||||| || || ||||||| ||||| |||  | |||||    
T  13241810 ttttcgttgaaaaacacaaattatttattaaaaa---attatatatttaatatgaaatacacaagttacacgacaaacttaccattttaaatttcttaac 13241906  T
Q  485 atgtcaaaatttgcacatgatagaaaaa 512  Q
    ||||  |||||| |||||||||||||||    
T  13241907 atgtgcaaattttcacatgatagaaaaa 13241934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 36490799 - 36490957
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||  ||| |||||||||||| |||| ||||||||||| ||||||||||||||||||   ||||||||| |||| ||||   |||||||    
T  36490799 attgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaag---ttatatattaaatacaaaatgtacaagtt 36490895  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||   ||| |||  |||| |||  | |||||||||  |||||||| ||||||||||||||    
T  36490896 ccaatgcaaagttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaac 36490957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 513
Target Start/End: Complemental strand, 30288995 - 30288864
Alignment:
Q  378 tagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaa 477  Q
    |||||||||||||||||||| || |||||||| |||||||  |    | ||||||||||||||| |||||||||||||| |||| |||  | || |||      
T  30288995 tagtaatttttcattgaaaaccaacaattattgattaaaagct----acatatttaatataaaaaacacaagttccaagttaaaattactactttaaact 30288900  T
Q  478 ttttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||||||||  |||||||||||||||||||||||    
T  30288899 tcttaacatgtgtaaatttgcacatgatagaaaaac 30288864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 514
Target Start/End: Complemental strand, 51920595 - 51920430
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacaca 445  Q
    |||||||||  ||||||||| |||| ||| |||||||||||||  |||||||||| |||||||||||| |||||   || |||||||||||| ||| | |    
T  51920595 tgtaacattatacatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttattcaaaag---ttttatatttaatattaaatata 51920499  T
Q  446 caagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||| ||  || ||||| ||   |||| |||  | |||||||||  ||||||||||||||||||||||||    
T  51920498 caaattttaatataaaatttctattttaaatttattaacatgtgcaaatttgcacatgatagaaaaact 51920430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 44918045 - 44918202
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| |||| |||||||| || |||||||| |||||||      || ||||||||||||||| ||| |||||    
T  44918045 attgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaa----gctacatatttaatataaaaaacataagtt 44918140  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||  |||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  44918141 ccaaattaaagttactactttaaatttcttaacatgtgtaaatttgcacatgatagaaaaac 44918202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 374 - 513
Target Start/End: Complemental strand, 6570120 - 6569985
Alignment:
Q  374 aaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaa 473  Q
    |||||| ||| ||||||||||||| || |||||||| |||||||  |    | ||||||||||||||| |||||||||||||| |||| |||  | || |    
T  6570120 aaagtactaacttttcattgaaaaccaacaattattgattaaaagct----acatatttaatataaaaaacacaagttccaagttaaagttactacttta 6570025  T
Q  474 aaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||  | |||||||||  |||||||||||||||||||||||    
T  6570024 aacttcttaacatgtgcaaatttgcacatgatagaaaaac 6569985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 513
Target Start/End: Complemental strand, 30363148 - 30362995
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||| | ||||||| |||||| |||| |||||||| || |||||| ||||||||||  ||    |||||||||||||||  |||||||||||||    
T  30363148 acatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctac---atatttaatataaaatgcacaagttccaag 30363052  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
      ||| |||  |||| |||  | ||| |||||  |||||||||||||||||||||||    
T  30363051 tcaaagttactattttaaatttgttatcatgtgcaaatttgcacatgatagaaaaac 30362995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 512
Target Start/End: Original strand, 43909281 - 43909368
Alignment:
Q  423 ttatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    ||||||||||||||||||| |||||||||  |||| ||||||| |||||||||  |||||  ||||  ||||||||||||||||||||||    
T  43909281 ttatatatttaatataaaatacacaagttataagacaaacttaccatttaaaatttttta--atgtgcaaatttgcacatgatagaaaaa 43909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 6180191 - 6180364
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaa-tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaat 435  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| |||||| | |||||  || ||||||||||| ||||||| |   |||||||||    
T  6180191 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattat-aattatttatttaaaagtttt---atatttaat 6180286  T
Q  436 ataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    || |||   ||||||||||| ||||| ||   |||| |||  | |||||||||  |||||||||||||||||||||||    
T  6180287 attaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 6180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 441
Target Start/End: Original strand, 8062225 - 8062310
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||    | ||||||||||||||||||    
T  8062225 attgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa----actatatatttaatataaaa 8062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 19277815 - 19277878
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtta 422  Q
    ||||||| ||||| || |||||||| |||| ||||||||||| |||||||||||||||||||||    
T  19277815 atgttaaaacaacaaagagtagtaagtttttattgaaaaacaacaattatttattaaaaagtta 19277878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 513
Target Start/End: Original strand, 22167352 - 22167513
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| ||||||||| |||||||| |||||||| ||||  |||||||||| |||||||||||| ||||   | | |||||||||||| |||   ||||    
T  22167352 aacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaa---aatttatatttaatattaaatgtacaa 22167448  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||| | ||| ||   |||| |||  | ||| |||||  ||||||||||||||||| |||||    
T  22167449 gttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgataggaaaac 22167513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 513
Target Start/End: Original strand, 38812757 - 38812918
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| ||||||||| |||||||| |||||||| ||||  ||  |||||| |||||||||||| |||||   || |||||||||||| |||   ||||    
T  38812757 aacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaag---ttttatatttaatattaaatgtacaa 38812853  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| ||| ||||| ||   ||||  ||  | |||||||||  |||||||||||||||||||||||    
T  38812854 gtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38812918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 21854269 - 21854208
Alignment:
Q  358 catgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaag 419  Q
    |||||||||| | |||||||||||||||||| ||||||||||| || ||||||||| |||||    
T  21854269 catgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaag 21854208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 419
Target Start/End: Complemental strand, 31101079 - 31101024
Alignment:
Q  363 taagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaag 419  Q
    ||||||| ||||||||||||||||| |||||||||||| || |||||||||||||||    
T  31101079 taagacatctaaaagtagtaatttt-cattgaaaaacaacacttatttattaaaaag 31101024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 2222377 - 2222235
Alignment:
Q  367 acaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatat-aaaacacacaagttccaagataaactta 465  Q
    ||||||||||||||||| |||| |||||||||||  |||||||||||||||||    ||  |||||||||| | || |||||||||  |||||||| |||    
T  2222377 acaactaaaagtagtaactttt-attgaaaaacaataattatttattaaaaag---ctaactatttaatatcataatacacaagttttaagataaagtta 2222282  T
Q  466 tcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    | |||  |||  | |||||||||  |||||| |||||||||||||||||    
T  2222281 ttatt--aaatttcttaacatgtgtaaattttcacatgatagaaaaact 2222235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 35512730 - 35512903
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| | ||||||| |||||||| |||||||| ||||  ||| |||||| || |||| |||| ||||||| |   ||||||||||    
T  35512730 tctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagtttt---atatttaata 35512826  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||    |||||||||| ||||| ||   |||| |||  | |||||||||  |||||||||||||||||||||||    
T  35512827 ttaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 35512903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 51382368 - 51382450
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattattt 410  Q
    |||| ||| ||||||||||  || |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||||    
T  51382368 tagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 509
Target Start/End: Original strand, 20357358 - 20357444
Alignment:
Q  423 ttatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaa 509  Q
    ||||||||||||| ||||| |||||||||| || | |||||||  || | ||| ||||||||||||  ||||||| |||||||||||    
T  20357358 ttatatatttaatgtaaaatacacaagttctaaaacaaacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaa 20357444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 509
Target Start/End: Complemental strand, 20562597 - 20562511
Alignment:
Q  423 ttatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaa 509  Q
    ||||||||||||| ||||| |||||||||| || | |||||||  || | ||| ||||||||||||  ||||||| |||||||||||    
T  20562597 ttatatatttaatgtaaaatacacaagttctaaaacaaacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaa 20562511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 7825031 - 7824947
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||  |||||||||||| |||||||    
T  7825031 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagtt 7824947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 39930941 - 39930892
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||||||||||||||||||||||||||||  |  ||||||||||||||||    
T  39930941 aactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaa 39930892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 49195647 - 49195719
Alignment:
Q  368 caactaaaagtagtaa--tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaa 440  Q
    ||||||||||||||||  ||||| |||||||||||  ||||||||| ||||||   |||||||||||||||||||    
T  49195647 caactaaaagtagtaaattttttaattgaaaaacacaaattatttactaaaaa--aattatatatttaatataaa 49195719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 4249293 - 4249384
Alignment:
Q  422 attatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||  | || |||  | |||||||||   |||||||||||| |||||||||    
T  4249293 attatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaaac 4249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 4249617 - 4249708
Alignment:
Q  422 attatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||  | || |||  | |||||||||   |||||||||||| |||||||||    
T  4249617 attatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaaac 4249708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 4249941 - 4250032
Alignment:
Q  422 attatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||  | || |||  | |||||||||   |||||||||||| |||||||||    
T  4249941 attatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaaac 4250032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 417
Target Start/End: Original strand, 281030 - 281068
Alignment:
Q  379 agtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  281030 agtaatttttcattgaaaaacaccaattgtttattaaaa 281068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 441
Target Start/End: Complemental strand, 23378655 - 23378574
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    ||||||| |||||||||| || ||| |||| ||||||||  | ||||||||| |||||||||||   ||||||||||||||||    
T  23378655 atgttaaaacaactaaaattaataactttttattgaaaataa-caattatttgttaaaaagttacactatatttaatataaaa 23378574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 11744966 - 11744917
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||  || |||| ||||||||||| ||||||||||||||||||||    
T  11744966 taaaagtataaactttttattgaaaaacaacaattatttattaaaaagtt 11744917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 413
Target Start/End: Original strand, 22331628 - 22331704
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttatt 413  Q
    ||||||||||  ||||||| ||||||||| | | |||| |||||||| ||||  |||||||||| ||||||||||||    
T  22331628 tctaacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattatttatt 22331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 23808440 - 23808523
Alignment:
Q  339 tctaacatgta--acattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||||||||||  |||||| ||||||||| | |||| | |||||||||||||| ||| |||||| || ||||||||| |||||||    
T  23808440 tctaacatgtacaacattgcacatgttaaaataactgatagtagtaatttttc-ttggaaaacaacatttatttattcaaaagtt 23808523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 42589261 - 42589302
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  42589261 tatatatttaatgtaaaatacacaagttccaatataaactta 42589302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 44013014 - 44013055
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  44013014 tatatatttaatgtaaaatacacaagttccaatataaactta 44013055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 421
Target Start/End: Complemental strand, 30109147 - 30109095
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||||||||||| ||||||  ||  ||||||| ||||||||||||||||||||    
T  30109147 aactaaaagtagcaattttatatgaaaaaacaacaattatttattaaaaagtt 30109095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 32716320 - 32716223
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||| | ||||| ||||| |||||||  | |||||||| ||||||    | ||| ||||||||||||||| |||||||||    
T  32716320 attgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaa----tgttacatatttaatataaaaaacacaagtt 32716225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 357 - 451
Target Start/End: Complemental strand, 39627724 - 39627633
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    ||||||||||  |||||||| ||| || |||| ||||||||||| |||| | ||||| |||||   ||| |||||||||||||||  ||||||||    
T  39627724 acatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaag---ttacatatttaatataaaatgcacaagtt 39627633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 467
Target Start/End: Complemental strand, 50467493 - 50467431
Alignment:
Q  403 aattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatc 467  Q
    |||||||||||||||| |||| |||| |||||||||||| ||| ||||| ||||| |||||||||    
T  50467493 aattatttattaaaaaattat-atat-tttaatataaaatacataagtttcaagacaaacttatc 50467431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 27665201 - 27665044
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||     ||| ||||||||||||||| |||||||||    
T  27665201 attgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacacaagtt 27665106  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||||    
T  27665105 ccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 27665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 16126716 - 16126559
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||| || |||||||| |||||||      || ||||||||||||||| |||||||||    
T  16126716 attgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa----gctacatatttaatataaaaaacacaagtt 16126621  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     |||| |||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  16126620 tcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 16126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 513
Target Start/End: Original strand, 36731208 - 36731358
Alignment:
Q  360 tgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagata 459  Q
    |||||||| ||||||| ||||||| ||||||||||||||||  ||||||| ||||||||   ||||| ||||||||||| || |||||||||| |||| |    
T  36731208 tgttaagaaaactaaatgtagtaacttttcattgaaaaacactaattatt-attaaaaaa--attatctatttaatatagaatacacaagttctaagaca 36731304  T
Q  460 aacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    || ||| ||||| |||  | |||||||||  |||||| ||||||||||||||||    
T  36731305 aatttaccattttaaatttcttaacatgtgtaaatttacacatgatagaaaaac 36731358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 352 - 511
Target Start/End: Original strand, 19228446 - 19228601
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||     ||| |||||||||| |||| |||||||||    
T  19228446 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaag----ttacatatttaatacaaaaaacacaagtt 19228541  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    |||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||    
T  19228542 ccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 352 - 511
Target Start/End: Complemental strand, 15411780 - 15411624
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   |||||||||||||||||||| ||||||||||| |||| |||||||||||||    || |||||||||||||||   |||||||    
T  15411780 attgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaag---ctacatatttaatataaaatgaacaagtt 15411684  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
     ||||| ||| |||  |||| |||  | |||||||||  ||||||||||||| |||||||    
T  15411683 tcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaa 15411624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 12016687 - 12016844
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| |||| |||||||| || |||||||| |||||||  |    | ||||||||||||||| |||||||||    
T  12016687 attgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagct----acatatttaatataaaaaacacaagtt 12016782  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| |||| |||  | || |||  | |||| ||||  |||||||||||||||||||||||    
T  12016783 ccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 12016844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 20566175 - 20566016
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   |||||||| ||| || | || ||||||||||| ||||||||||||||||   |||||| ||||||||| |||| |||||||||    
T  20566175 attgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaa---tattatctatttaataaaaaatacacaagtt 20566079  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    |||| | |||| ||  | || |||  | |||||||||  ||||||||||||||||||||||||    
T  20566078 ccaatacaaacataatactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaact 20566016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 513
Target Start/End: Original strand, 9747354 - 9747495
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    ||||||||||||||| | || ||||||||||| ||| ||||| | |||||| ||    |||||||||||||||   ||||||||||||| ||| |||  |    
T  9747354 aactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctac---atatttaatataaaatgaacaagttccaagacaaaattacta 9747450  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  | ||||||||| ||||||||||||||||||||||||    
T  9747451 ttttaaacttcttaacatgtgaaaatttgcacatgatagaaaaac 9747495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 511
Target Start/End: Original strand, 14377445 - 14377600
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||| |||| |||||||| || ||||||||| ||||||     ||| ||||||||||||||| |||||||||    
T  14377445 attgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaag----ttacatatttaatataaaaaacacaagtt 14377540  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
     ||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||    
T  14377541 tcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaa 14377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 514
Target Start/End: Original strand, 45062225 - 45062377
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||| |||| ||||||| |||| |||| ||| |||||||  |||||||||||||||||   ||| || ||||||||||||  |||||||||||| ||    
T  45062225 atgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaag---ttacatgtttaatataaaatgcacaagttccaaaat 45062321  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||| |||  ||||  ||  | |||| ||||  ||||||||||||||||||||||||    
T  45062322 aaagttactattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaact 45062377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 2060184 - 2060044
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatc 467  Q
    |||||||||||| ||| |||||||| |||| || ||||||||||||||| || ||    ||||||||||||||| |||||| ||||||| |||| |||      
T  2060184 caactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctac---atatttaatataaaagacacaaattccaagttaaagttact 2060088  T
Q  468 atttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    | || |||  | |||||||||  |||||||||||| ||||||||    
T  2060087 actttaaatttcttaacatgtgtaaatttgcacatcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 7720120 - 7720204
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  |||||||||| |||||||||||| |||||||    
T  7720120 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtt 7720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 513
Target Start/End: Original strand, 9450315 - 9450435
Alignment:
Q  390 attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtc 489  Q
    ||||||||||| |||||||||||||||||   ||||||||||||||| |||| |||||| |||||| | |||| ||  | || |||  | |||||||||     
T  9450315 attgaaaaacaacaattatttattaaaaa---attatatatttaatagaaaatacacaaattccaatacaaacatactactttaaatttcttaacatgtg 9450411  T
Q  490 aaaatttgcacatgatagaaaaac 513  Q
     | |||||||||||||||||||||    
T  9450412 cagatttgcacatgatagaaaaac 9450435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 461
Target Start/End: Original strand, 22705475 - 22705580
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| ||| |||     ||| ||||||||||||||| |||||||||    
T  22705475 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaa----gttacatatttaatataaaaaacacaagtt 22705570  T
Q  452 ccaagataaa 461  Q
     |||| ||||    
T  22705571 tcaagttaaa 22705580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 512
Target Start/End: Complemental strand, 12919509 - 12919351
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttc-attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagt 450  Q
    |||| |||||||||  ||| |||||||| ||||||||  ||||||||  | |||| ||||||||||||   | || |||||||||||||||   ||||||    
T  12919509 attgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaa---actacatatttaatataaaatgaacaagt 12919413  T
Q  451 tccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | ||||||||| |||  |||| |||  |||||||||||  |||||||||||||||| |||||    
T  12919412 ttcaagataaagttactattttaaattttttaacatgtgtaaatttgcacatgataaaaaaa 12919351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 16919311 - 16919153
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||  ||||||| || |||||||| |||||||     ||| ||||||||||||||| |||||||||    
T  16919311 attgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaag----ttacatatttaatataaaaaacacaagtt 16919216  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
     ||||  ||| |||  | || |||  | |||| ||||  |||||||||||||||||| |||||    
T  16919215 tcaagtcaaagttactactttaaacttgttaatatgtgcaaatttgcacatgatagataaact 16919153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 39904205 - 39904140
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||    
T  39904205 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 39904140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 441
Target Start/End: Original strand, 2051641 - 2051720
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    ||||||| |||||||||| ||| || |||| ||||||||||| |||||||||||||||||    ||| |||||||||||||||    
T  2051641 atgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaa---tttaaatatttaatataaaa 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 514
Target Start/End: Original strand, 23932585 - 23932744
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   |||||||| |||||| ||| |||||||||| | ||||||||||||||||||   || |||| |||||||||||  ||||||||    
T  23932585 attgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaag---ttttatagttaatataaaatgcacaagtt 23932681  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    || | | ||  |||  |||| |||  | |||| || |  ||||||||||||||||||||||||    
T  23932682 ccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaact 23932744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 357 - 512
Target Start/End: Complemental strand, 34214104 - 34213950
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    |||||||||  ||||||||| |||||| |||| |||||||| || |||||||||  |||||||||| ||||| ||||||| ||||    ||||||||||     
T  34214104 acatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagtta-tatatttttaataaaaaatgttcaagttccaat 34214006  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
      ||| |||  |||| |||  | |||||||||  ||||||||||| ||||||||||    
T  34214005 gaaaaattactattttaaatttcttaacatgtgcaaatttgcacacgatagaaaaa 34213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 43388908 - 43388857
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaag 419  Q
    ||||||||||||| ||||||| |||||||| || ||||||||||||||||||    
T  43388908 caactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 43388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 43806365 - 43806538
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||| ||| |||||||| ||||  ||| |||||| |||||||||||| |||||   || |||||||||||    
T  43806365 tctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaag---ttttatatttaata 43806461  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||| ||| | ||| ||   |||| |||  |||||||||||  |||||| |||| |||||||||||    
T  43806462 ttaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaatttacacacgatagaaaaac 43806538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 10690803 - 10690868
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| ||||||||||  |||||||| ||||||||||||||| |||| || |||||||| |||||||    
T  10690803 attgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattattgattaaaa 10690868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 513
Target Start/End: Complemental strand, 29157918 - 29157829
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||||||| |||| | |||||||||||   ||| |||  ||||||||  | |||||||||  |||||||||||||||||||||||    
T  29157918 tatatatttaatacaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 29157829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 418
Target Start/End: Complemental strand, 22162234 - 22162169
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||| |||||||||| |||||||||||||||| |||| |||| ||| || |||||| ||||||||||    
T  22162234 attgcacatgttaaggcaactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaa 22162169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 3286584 - 3286625
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  3286584 tatatatttaatgtaaaatacacaagttccaatataaactta 3286625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 455
Target Start/End: Complemental strand, 11661060 - 11660977
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaa 455  Q
    ||||||||||||| || |||| |||||| || | ||||||||||||||||||   ||||| |||||||| |||| | |||||||||||    
T  11661060 caactaaaagtagcaaatttttattgaataaaa-caattatttattaaaaag---ttatacatttaatacaaaatatacaagttccaa 11660977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 25068603 - 25068539
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagttat-tatatatttaatataaaacacacaa 448  Q
    ||||| ||||||||| | ||||||||||||||||| |||| ||| |||||||||||||| ||||||    
T  25068603 ttttttattgaaaaaaa-caattatttattaaaaaattatatatttatttaatataaaatacacaa 25068539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 417
Target Start/End: Complemental strand, 26230010 - 26229946
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| ||||||||||  |||||||||||||||||||| ||| |||| || |||||||| |||||||    
T  26230010 attgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaa 26229946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 43941943 - 43941902
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  43941943 tatatatttaatgtaaaatacacaagttccaatataaactta 43941902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 4579941 - 4579889
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatt 409  Q
    ||||||||||  |||||||  |||||| |||||||||||||||| ||||||||    
T  4579941 acatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattatt 4579889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 35729188 - 35729243
Alignment:
Q  403 aattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaa 461  Q
    |||||||||||||||| ||||   ||||||| ||||||| ||||||||||||| |||||    
T  35729188 aattatttattaaaaatttat---atatttactataaaatacacaagttccaatataaa 35729243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 471
Target Start/End: Original strand, 34249702 - 34249814
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||    ||| ||||||||||||||| ||||||||||||||    
T  34249702 acatgataagacagctaaaagtattaatttttcattgaaaaacactaattatttattaaaaa--agttaaatatttaatataaaatacacaagttccaag 34249799  T
Q  457 ataaacttatcattt 471  Q
    | ||||||| |||||    
T  34249800 acaaacttaccattt 34249814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 20514669 - 20514809
Alignment:
Q  368 caactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatc 467  Q
    ||||| ||||||||||||| | ||||||||| | ||||||||||||||||||||||   |||||||||||||||   ||||||||||||| ||||||| |    
T  20514669 caacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttat---atatttaatataaaatgtacaagttccaagacaaacttacc 20514765  T
Q  468 atttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    |||| |||  | ||||| |||  |||| ||||||||||||||||    
T  20514766 attttaaatttcttaacctgtgcaaatatgcacatgatagaaaa 20514809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 10129124 - 10129281
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  |||||||| |||||||||||||||||||| || |||||||| |||||||  |    | ||||||||||||||| |||||||||    
T  10129124 attgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagct----acatatttaatataaaaaacacaagtt 10129219  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| |||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  10129220 ccaagttaaaattactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 10129281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 31812118 - 31812291
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||||| | |||||||||||||||||| ||||||||| |  | |||||||||||||||    || ||||||||||    
T  31812118 tctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaag---ctacatatttaata 31812214  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||  |||||||||||||  ||| ||| ||||| |||  | |||| ||||  |||||||||||||||||||||||    
T  31812215 tgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 31812291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 9743888 - 9743982
Alignment:
Q  358 catgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||     ||| ||||||||||||||| ||| ||||||||||    
T  9743888 catgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacataagttccaag 9743982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 7140616 - 7140459
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| |||| |||||||| || |||||||| |||||||| |    | ||||||||||||||| |||||||||    
T  7140616 attgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaact----acatatttaatataaaaaacacaagtt 7140521  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| |||| |||  | || |||  | |||| ||||  |||||||||||||||||||||||    
T  7140520 ccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaac 7140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 379 - 511
Target Start/End: Complemental strand, 7393375 - 7393247
Alignment:
Q  379 agtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaat 478  Q
    |||| |||||| |||||||||| ||||||||||||||||||   ||||||||||||||||||| ||||||||| ||||| ||| |||  |||| |||  |    
T  7393375 agtagtttttcgttgaaaaacaccaattatttattaaaaag---ttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattt 7393280  T
Q  479 tttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    ||||||||||  ||||| |||||||||| ||||    
T  7393279 tttaacatgtgcaaattcgcacatgataaaaaa 7393247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 513
Target Start/End: Original strand, 26834578 - 26834739
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| ||||| ||||| | |||||||||||||||||| |||||||||||  | |||||||||||||||    || ||||||||||| |||  |||||    
T  26834578 aacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaag---ctacatatttaatatgaaatgcacaa 26834674  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||  ||| ||| ||||| |||  | |||| || |  |||||||||||||||||||||||    
T  26834675 gttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatgatagaaaaac 26834739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 513
Target Start/End: Original strand, 26682060 - 26682246
Alignment:
Q  326 aaattaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaa-tttttcattgaaaaacatcaattatttattaaaaagtta 422  Q
    |||||||  ||| ||||||||||  || |||| ||||||||| ||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||       
T  26682060 aaattagagtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattg-aaaacaacaattatttattaaaaag--- 26682155  T
Q  423 ttatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     || | |||||||||||||  |||||||||||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  26682156 ctacacatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 26682246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 512
Target Start/End: Complemental strand, 13328091 - 13327942
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||||  ||||||||||||||| ||||||||||||| || |||||||| ||||||    | ||| ||||||||||||||| ||||||||| ||||      
T  13328091 atgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaa----tgttacatatttaatataaaaaacacaagtttcaagtc 13327996  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    ||| |||  | || |||  | |||||||||  ||||||||||||||||||||||    
T  13327995 aaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 417
Target Start/End: Original strand, 8140593 - 8140653
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  8140593 acatgttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaa 8140653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 12131988 - 12132161
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| |||||||||   |||||||||||| || |||| ||||||||||  ||| ||||||||||||||   ||||||||||||||    
T  12131988 tctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaag---ttatatatttaata 12132084  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||    |||||||||| | |||||||  | || |||  | |||||||||  || |||||| |||||||||||||    
T  12132085 taaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaac 12132161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 37264517 - 37264592
Alignment:
Q  348 taacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    |||||||| ||||||||| ||||||||||||||||| || | |||||||| ||  |||||||||||||||||||||    
T  37264517 taacattgcacatgttaaaacaactaaaagtagtaaattgttattgaaaatcaataattatttattaaaaagttat 37264592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 369 - 513
Target Start/End: Original strand, 6818054 - 6818195
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    |||||||| |||||| ||| |||||||||| | ||||||||||||||||||   || |||| |||||||||||  |||||||||| | | ||  |||  |    
T  6818054 aactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaag---ttttatagttaatataaaatgcacaagttccgatacaattttacta 6818150  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  | |||||||||  |||||||||||||||||||||||    
T  6818151 ttttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 6818195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 8284727 - 8284568
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||  |||||||||||||||| |||| ||| ||||| | ||||||||||||||||||  |  |  |||||||||||||| |||||||||    
T  8284727 attgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaag--accacctatttaatataaaatacacaagtt 8284630  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||   || ||   | || |||  | |||||||||  |||||||||||||||||||||||    
T  8284629 ccaagtcgaagttgctaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 8284568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 512
Target Start/End: Complemental strand, 34741813 - 34741666
Alignment:
Q  361 gttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataa 460  Q
    ||||| |||||||||| ||  || |||| ||||||||  || ||||||||||||||||   ||||||||||||||||||||  ||||||||| || | ||    
T  34741813 gttaaaacaactaaaaataacaacttttaattgaaaacaat-aattatttattaaaaa---attatatatttaatataaaatgcacaagttctaatacaa 34741718  T
Q  461 acttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    |||||| |||| |||  ||||||||||   |||||| || ||||||||||||    
T  34741717 acttattattttaaactttttaacatgaacaaatttacatatgatagaaaaa 34741666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 513
Target Start/End: Original strand, 38843699 - 38843882
Alignment:
Q  329 ttaggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattat 426  Q
    ||||| ||| ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||   || |    
T  38843699 ttagggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaag---tttt 38843795  T
Q  427 atatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||||| |||   ||||||||||| | ||| ||   |||| |||  | ||| |||||  |||||| ||||||||||||||||    
T  38843796 atatttaatattaaatgtacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaatttacacatgatagaaaaac 38843882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 513
Target Start/End: Complemental strand, 12189747 - 12189588
Alignment:
Q  351 cattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagt 450  Q
    ||||| ||||||||| |||||||| |||| ||| ||||  |||||||||| |||||||||||| ||||   | | |||||||||||| |||   ||||||    
T  12189747 cattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaa---aatttatatttaatattaaatgtacaagt 12189651  T
Q  451 tccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| ||||| ||   |||| |||  | ||| |||||  |||||||||||||||||||||||    
T  12189650 tccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 12189588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 513
Target Start/End: Complemental strand, 12434175 - 12434016
Alignment:
Q  351 cattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagt 450  Q
    ||||| ||||||||| |||||||| |||| ||| ||||  |||||||||| |||||||||||| ||||   | | |||||||||||| |||   ||||||    
T  12434175 cattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaa---aatttatatttaatattaaatgtacaagt 12434079  T
Q  451 tccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||| ||||| ||   |||| |||  | ||| |||||  |||||||||||||||||||||||    
T  12434078 tccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 12434016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 513
Target Start/End: Complemental strand, 18567553 - 18567416
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcattt 471  Q
    ||||||| |||| ||||||||||||| || |||||||| ||||||    | ||| ||||||||||||||| ||||| ||||||||  ||| |||  | ||    
T  18567553 taaaagtggtaacttttcattgaaaaccaacaattattgattaaa----tgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatt 18567458  T
Q  472 aaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     |||  | |||||||||  |||||||||||||||||||||||    
T  18567457 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 18567416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 511
Target Start/End: Complemental strand, 38048078 - 38047940
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    |||||||| |||||| |||||||| | ||||| |||||||||||||||||   | | ||||||||| |||||| |||||| |||||||| ||| ||| ||    
T  38048078 aactaaaaatagtaacttttcattcacaaacaccaattatttattaaaaa---aatgtatatttaagataaaatacacaaattccaagacaaagttacca 38047982  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    ||||||  |  |||||||||  |||||||||||| ||| ||||    
T  38047981 tttaaatta-cttaacatgtgcaaatttgcacataataaaaaa 38047940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 39701960 - 39701803
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||| ||||||| || |||||| | |||||||     ||| ||||||||||||||| |||||| ||    
T  39701960 attgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaag----ttacatatttaatataaaaaacacaaatt 39701865  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  39701864 tcaagtcaaagttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaac 39701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 513
Target Start/End: Original strand, 29642648 - 29642781
Alignment:
Q  377 gtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatat-aaaacacacaagttccaagataaacttatcatttaaaa 475  Q
    ||||||| |||||||||||||||| |||||| |||||||||||   || | |||||||||| |||| ||||||||| ||||| ||||||| ||||| |||    
T  29642648 gtagtaacttttcattgaaaaacaccaatta-ttattaaaaag---ttgtctatttaatataaaaaaacacaagtttcaagacaaacttaccattttaaa 29642743  T
Q  476 aattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
        ||| ||| |  |||||||||||||||||||||||    
T  29642744 ttccttatcatatgcaaatttgcacatgatagaaaaac 29642781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 461
Target Start/End: Original strand, 31133889 - 31133961
Alignment:
Q  385 ttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaa 461  Q
    ||||||||||||||||  |||||||||||||||||||    |||||||||||||||| ||||| ||| |||||||||    
T  31133889 ttttcattgaaaaacacaaattatttattaaaaagtt----tatatttaatataaaatacacaggtttcaagataaa 31133961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 330 - 421
Target Start/End: Complemental strand, 36967252 - 36967159
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||| ||| ||||||||||  ||||||| |||||||||||||||||| |||||||| ||||  ||| |||||| ||||||| |||| |||||||    
T  36967252 tagggtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagtt 36967159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 421
Target Start/End: Original strand, 45005975 - 45006059
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||||    
T  45005975 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt 45006059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 9801709 - 9801846
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcattt 471  Q
    |||||||||||| ||||||||||||| || |||||||| |||||||     ||||||||||||||||| | ||| ||||| ||||  ||| |||  | ||    
T  9801709 taaaagtagtaacttttcattgaaaatcaacaattattgattaaaa----gttatatatttaatataacaaacataagtttcaagtcaaagttactactt 9801804  T
Q  472 aaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     |||  | |||||||||  ||||||||||||||| |||||||    
T  9801805 taaacttcttaacatgtgcaaatttgcacatgattgaaaaac 9801846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 35678432 - 35678275
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   ||||||||||||||| ||||||||||||| || |||||| ||||||||||    ||| ||||||||||| ||| |||||||||    
T  35678432 attgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaa---tttacatatttaatat-aaatacacaagtt 35678337  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||| ||||||    
T  35678336 tcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgataaaaaaac 35678275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 26195533 - 26195495
Alignment:
Q  384 tttttcattgaaaaacatcaattatttattaaaaagtta 422  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26195533 ttttttattgaaaaacatcaattatttattaaaaagtta 26195495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 418
Target Start/End: Complemental strand, 9580270 - 9580201
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| ||||    
T  9580270 aacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaa 9580201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 38527841 - 38527902
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttatt 413  Q
    |||| |||||||||| |||||||||||| ||| ||||||||||||| || | ||||||||||    
T  38527841 attgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattatttatt 38527902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 9824986 - 9825054
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattata 427  Q
    |||||||  ||| ||||| |||||| |||| |||||||||||||||| |||||| ||||||||| ||||    
T  9824986 atgttaatgcaattaaaattagtaactttttattgaaaaacatcaataatttataaaaaagttaatata 9825054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 441
Target Start/End: Complemental strand, 10974705 - 10974626
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaa 441  Q
    |||||||  ||||||||||||||||  ||| |||||||||||  || |||||||||||||   |||| |||||||||||||||    
T  10974705 atgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaa---attacatatttaatataaaa 10974626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 40210971 - 40210886
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||||  ||||||||||| ||| ||||||||||||| || |||||||| ||||||    | ||| ||||||||||||||| ||||||    
T  40210971 atgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaa----tgttacatatttaatataaaaaacacaa 40210886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 6850720 - 6850669
Alignment:
Q  367 acaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    |||||||| |||||||| |||| ||||||||||| |||||||||||| ||||    
T  6850720 acaactaatagtagtaactttttattgaaaaacaacaattatttattcaaaa 6850669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 513
Target Start/End: Complemental strand, 14816283 - 14816126
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   ||||||||||||||| |||| |||||||| || |||||| ||||||||||    ||| ||||||||||| ||| |||||||||    
T  14816283 attgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaa---tttacatatttaatat-aaatacacaagtt 14816188  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
      |||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||||    
T  14816187 ttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaac 14816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 14829457 - 14829614
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   ||||||||||||||| |||| |||||||| || |||||| ||||||||||    ||| ||||||||||| ||| |||||||||    
T  14829457 attgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaa---tttacatatttaatat-aaatacacaagtt 14829552  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
      |||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||||    
T  14829553 ttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaac 14829614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 421
Target Start/End: Complemental strand, 16445899 - 16445824
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||||||||  | ||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||||    
T  16445899 tgtaacattacatatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt 16445824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 44091346 - 44091404
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||| ||||| ||||||| |||||||| |||||||| || |||||||||||||||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaa-caacaattatttattaaaaa 44091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 5573313 - 5573379
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    ||||||||| | |||||||| ||  || |||| ||||||||||| |||| |||||||||||||||||    
T  5573313 acatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaagttat 5573379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 12346031 - 12346097
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttat 423  Q
    ||||||||| |||| ||| |||||||| ||||  |||||||||| |||||||||||| |||| ||||    
T  12346031 acatgttaaaacaattaatagtagtaactttttcttgaaaaacaacaattatttattcaaaacttat 12346097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 10543718 - 10543677
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  10543718 tatatatttaatgtaaaatacacaagttccaatataaactta 10543677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 513
Target Start/End: Complemental strand, 14961771 - 14961663
Alignment:
Q  402 caattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcaca 501  Q
    |||| ||||||||||||||||    ||||||||| |||||  |||||||||||| | ||| |||  |||| |||  | ||| |||||  |||||||||||    
T  14961771 caatcatttattaaaaagttaa---atatttaatttaaaatgcacaagttccaatacaaaattactattttaaacttcttagcatgtgcaaatttgcaca 14961675  T
Q  502 tgatagaaaaac 513  Q
    ||||||||||||    
T  14961674 tgatagaaaaac 14961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 15198945 - 15198900
Alignment:
Q  468 atttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||  |||||||||||  |||||||||||||||||||||||    
T  15198945 atttaaaattttttaacatgtgcaaatttgcacatgatagaaaaac 15198900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 19343994 - 19343937
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatt 409  Q
    |||| ||||||||||  ||| ||||||||||| ||||||||||||| || ||||||||    
T  19343994 attgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattatt 19343937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 418
Target Start/End: Complemental strand, 4080557 - 4080485
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||| |||| ||||||||||  || |||||||||||| |||||||||||||  | |||||| ||| ||||||    
T  4080557 tgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaa 4080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 418
Target Start/End: Complemental strand, 4084706 - 4084634
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||| |||| ||||||||||  || |||||||||||| |||||||||||||  | |||||| ||| ||||||    
T  4084706 tgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaa 4084634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 418
Target Start/End: Complemental strand, 4103013 - 4102941
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||| |||| ||||||||||  || |||||||||||| |||||||||||||  | |||||| ||| ||||||    
T  4103013 tgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaa 4102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 13496868 - 13496820
Alignment:
Q  373 aaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    |||| |||||| ||| |||||||||| | ||||||||||||||||||||    
T  13496868 aaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt 13496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 34869683 - 34869611
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||| || |||||| |||||||| | |||||| ||||  || ||||||| |||||||||||| |||||||    
T  34869683 aacattgcacgtgttaaaacaactaataatagtaactttttcttcaaaaacaacaattatttattcaaaagtt 34869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 330 - 513
Target Start/End: Complemental strand, 52960 - 52779
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattata 427  Q
    |||| ||| ||||||||||  || |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||     ||| |    
T  52960 tagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaag----ttaca 52865  T
Q  428 tatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||| |||| ||||||||||||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  52864 tatttaatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 52779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 330 - 513
Target Start/End: Original strand, 145674 - 145855
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattata 427  Q
    |||| ||| ||||||||||  || |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||     ||| |    
T  145674 tagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaag----ttaca 145769  T
Q  428 tatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||||||||| |||| ||||||||||||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  145770 tatttaatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 12642150 - 12641992
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| || |||||||   |||||    | ||| ||||||||||||||| |||||||||    
T  12642150 attgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaa----tgttacatatttaatataaaaaacacaagtt 12642055  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||   ||| |||| | || |||  | |||||||||  |||||||||||| |||||||||||    
T  12642054 ccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcacattatagaaaaact 12641992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 2795544 - 2795701
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||| || |||||||| |||||||     ||| |||||||||| |||| |||||||||    
T  2795544 attgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaag----ttacatatttaatacaaaaaacacaagtt 2795639  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||||  ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  2795640 ccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 2795701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 32020134 - 32019983
Alignment:
Q  360 tgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagata 459  Q
    |||||||  |||||||  |||||| ||||| |||||||||| | ||||||  | ||||||||||    ||||||||||| || ||||||||||||||| |    
T  32020134 tgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattattattaaaaaagttatc---tatttaatatagaatacacaagttccaagaca 32020038  T
Q  460 aacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    |||||| ||||| |||  | |||||||||  ||||||||||||||||||||||||    
T  32020037 aacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaact 32019983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 513
Target Start/End: Original strand, 4047440 - 4047590
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||||  ||||||||||||||| ||||||||||||| || ||||| || |||||||  |    | ||||||||||||||| |||||||||||||| |    
T  4047440 atgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagct----acatatttaatataaaaaacacaagttccaagtt 4047535  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  | || |||  | |||||||||  |||||||||||||||||||||||    
T  4047536 aaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 4047590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 346 - 471
Target Start/End: Complemental strand, 10665128 - 10665007
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacaca 445  Q
    ||||| |||| ||||||||||  ||||||||||| ||| ||||||||| |||| || |||||||||||||||||   ||||| |||||||||  || |||    
T  10665128 tgtaatattgcacatgttaaggtaactaaaagtaataacttttcattg-aaaatattaattatttattaaaaag---ttataaatttaatatgcaataca 10665033  T
Q  446 caagttccaagataaacttatcattt 471  Q
    |||||||||||| ||||||| |||||    
T  10665032 caagttccaagacaaacttaccattt 10665007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 369 - 514
Target Start/End: Complemental strand, 15241091 - 15240949
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    |||||||| |||||   ||||||||||||||| |||||||||||||||||   |||||||||||||||||| |  ||||| || ||| | ||| |||  |    
T  15241091 aactaaaaatagtatcatttcattgaaaaacaacaattatttattaaaaa---attatatatttaatataacatgcacaaatttcaatacaaatttaata 15240995  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    |||  ||  |||||||||||  ||||||||||||||||||||||||    
T  15240994 ttttgaactttttaacatgtacaaatttgcacatgatagaaaaact 15240949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 461
Target Start/End: Original strand, 9184222 - 9184333
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacaca 445  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||||||||||| ||  ||||||| |||||||    | || ||||||||||||||| |||    
T  9184222 tgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaa----actacatatttaatataaaaaaca 9184317  T
Q  446 caagttccaagataaa 461  Q
    ||||||||||| ||||    
T  9184318 caagttccaagttaaa 9184333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 513
Target Start/End: Original strand, 6863584 - 6863734
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||||  |||||||||||| || |||| |||||||  || |||||||||| |||||||||||   |||||||||| ||||    |||||||||| ||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattgaaac-caacaattatttaataaaaagttat---atatttaatacaaaatgttcaagttccaatat 6863679  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  |||| |||  |||||||||||  |||||||||||||||||||||||    
T  6863680 aaagttactattttaaattttttaacatgtgcaaatttgcacatgatagaaaaac 6863734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 461
Target Start/End: Complemental strand, 30328484 - 30328379
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| ||||||||||| ||||||||||||| |||||||||| |||| || |||||||| |||||||      || ||||||||||||||| |||||||||    
T  30328484 attgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaa----gctacatatttaatataaaaaacacaagtt 30328389  T
Q  452 ccaagataaa 461  Q
    ||||| ||||    
T  30328388 ccaagttaaa 30328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 512
Target Start/End: Original strand, 34578037 - 34578188
Alignment:
Q  357 acatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaag 456  Q
    ||||||||||  ||||||||||| ||||||||||||||||| || ||||| || |||||||      || ||||||||||||||| | |||||||  |||    
T  34578037 acatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaa----gctacatatttaatataaaaaatacaagttttaag 34578132  T
Q  457 ataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
     |||| |||  |||| |||  |||||||||||  |||||||||||||||| |||||    
T  34578133 ttaaagttactattttaaactttttaacatgtgcaaatttgcacatgataaaaaaa 34578188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 513
Target Start/End: Complemental strand, 13516089 - 13515926
Alignment:
Q  346 tgtaacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacaca 445  Q
    ||||| |||| ||||||||||  ||||||| |||| || ||| ||||| |||| |||||||||| ||||||||   ||||| ||||||||||| || | |    
T  13516089 tgtaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaatatcaattatt-attaaaaa---attatctatttaatatagaatata 13515994  T
Q  446 caagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||| ||||||||||||  || || |||  | |||||||||  |||||| ||||||||||||||||    
T  13515993 taagtttcaagataaactttccactttaaatttgttaacatgtgcaaatttacacatgatagaaaaac 13515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 514
Target Start/End: Complemental strand, 31366133 - 31365949
Alignment:
Q  330 taggctttctctaacatgt--aacattggacatgttaagacaactaaaagtagtaa--tttttcattgaaaaacatcaattatttattaaaaagttatta 425  Q
    |||| ||| ||||||||||  || |||| ||||||||||  | ||||| |||||||  ||||| |||||||| || |||||||| ||||||    | |||    
T  31366133 tagggtttgtctaacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgattaaa----tgtta 31366038  T
Q  426 tatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
     ||||||||||||||| ||||||||||||||  ||| |||  | || |||  | |||||||||  ||||||||||||||||||||||||    
T  31366037 catatttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaact 31365949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 512
Target Start/End: Original strand, 33072697 - 33072856
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttc--attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaag 449  Q
    |||| |||||||||  ||||||||||||||| |||||   ||||||| |||||||||||||||| ||||| |||   |||||||| |||||| ||| |||    
T  33072697 attgcacatgttaaatcaactaaaagtagtacttttttttattgaaagacatcaattatttattgaaaagctat---atatttaacataaaatacagaag 33072793  T
Q  450 ttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    ||| |||| ||| | | ||||| |||  |||||||||||  ||||||| | || |||||||||    
T  33072794 ttctaagacaaaatcaacattttaaattttttaacatgtgcaaatttgtagataatagaaaaa 33072856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 514
Target Start/End: Original strand, 35469590 - 35469733
Alignment:
Q  369 aactaaaagtagtaatttttc-attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatc 467  Q
    |||||||||||| |||||||  ||||||||||| |||| | |||  ||||||||||   ||||||||||||||| | || |||||||| | || ||||      
T  35469590 aactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttat---atatttaatataaaataaactagttccaataaaagcttact 35469686  T
Q  468 atttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    |||| |||  |||||||||||  |||||| |||||||||||||||||    
T  35469687 attttaaattttttaacatgtgcaaatttacacatgatagaaaaact 35469733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 513
Target Start/End: Original strand, 3398225 - 3398398
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaata 436  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||   ||||||||||| |||||   || |||||||||||    
T  3398225 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaag---ttttatatttaata 3398321  T
Q  437 taaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    | |||   ||||||||||| | ||| ||   |||| |||  | |||||||||  |||||||||||||||||||||||    
T  3398322 ttaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 3398398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 5958264 - 5958215
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  5958264 aactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaa 5958215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 417
Target Start/End: Original strand, 11375980 - 11376045
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    |||| |||||||||  |||||||||||||||| ||||||||||||| ||  |||||||||||||||    
T  11375980 attgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaa 11376045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 512
Target Start/End: Complemental strand, 14466580 - 14466495
Alignment:
Q  427 atatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    ||||||||||||||| ||||||||| |||| |||| |||  | || |||  | |||||||||| ||||||||||||||||||||||    
T  14466580 atatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtctaaatttgcacatgatagaaaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 18841878 - 18841794
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||| ||||||||| |||||||| |||||||| ||||  ||| |||||| |||||||||||| |||||||    
T  18841878 tctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagtt 18841794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 24329787 - 24329726
Alignment:
Q  358 catgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaag 419  Q
    |||||||||| | |||||||||||||||||| ||||||||||| || ||||||||| |||||    
T  24329787 catgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaag 24329726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 28629899 - 28629993
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagt 450  Q
    |||| |||||||||  ||||||||| || ||| ||||||||||||| || ||||||||||||||||     ||| ||||||||||||||| ||||||||    
T  28629899 attgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaag----ttacatatttaatataaaaaacacaagt 28629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 441
Target Start/End: Complemental strand, 40309590 - 40309499
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacat--caattatttattaaaaagttattatatatttaatataaaa 441  Q
    ||||||| ||||||||| |||||||||||||  ||| ||| ||||||||| ||  |||| |||||||||||||   |||||||||||||||||||    
T  40309590 aacattgaacatgttaaaacaactaaaagtaacaatattttattgaaaaaaataacaataatttattaaaaag---ttatatatttaatataaaa 40309499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 511
Target Start/End: Complemental strand, 31567632 - 31567493
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatca 468  Q
    ||||||||  ||||| |||| |||||||||||  ||||||| ||||||||   | || |||||||||||||||   |||| || ||||| ||| ||| ||    
T  31567632 aactaaaaagagtaactttttattgaaaaacaataattattcattaaaaa---actacatatttaatataaaatgaacaaatttcaagacaaaattacca 31567536  T
Q  469 tttaaaaaattttaacatgtcaaaatttgcacatgatagaaaa 511  Q
    ||| |||  |||||||||||  ||||||||| |||||||||||    
T  31567535 ttttaaattttttaacatgtgcaaatttgcatatgatagaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 11636752 - 11636909
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||| |||||||||   ||||||||||||||| ||||||||||||| || |||||| ||||||||||    ||| ||||||||||| |||  ||||||||    
T  11636752 attgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaa---tttacatatttaatat-aaatgcacaagtt 11636847  T
Q  452 ccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
     ||||  ||| |||  | || |||  | ||| |||||  |||||||||||||||||||||||    
T  11636848 tcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 11636909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 11692749 - 11692690
Alignment:
Q  390 attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagtt 451  Q
    |||||||||||||||||||||||||||| ||  ||||||| ||| ||||||| |||||||||    
T  11692749 attgaaaaacatcaattatttattaaaaggt--ttatataattattataaaatacacaagtt 11692690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 512
Target Start/End: Original strand, 41350244 - 41350379
Alignment:
Q  373 aaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcattta 472  Q
    ||||||| ||||||| || |||||| || ||||||||||||||||     ||| |||||||||||||||  |||||||||||||  ||| |||  | ||     
T  41350244 aaaagtattaattttgcactgaaaatcaacaattatttattaaaag----ttacatatttaatataaaaagcacaagttccaagtcaaaattactacttt 41350339  T
Q  473 aaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    |||  | |||||||||  |||||||||||||||| |||||    
T  41350340 aaacttcttaacatgtgcaaatttgcacatgataaaaaaa 41350379  T

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Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 16174762 - 16174713
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||||||||| ||||||||||||| || |||||| ||||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaa 16174713  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 421
Target Start/End: Complemental strand, 26376742 - 26376658
Alignment:
Q  339 tctaacatgt--aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||||||  ||||||| ||||||||| |||| ||| |||||||| ||||  ||| |||||| |||||||||||| |||||||    
T  26376742 tctaacatgtgcaacattgtacatgttaaaacaaataatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt 26376658  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 513
Target Start/End: Complemental strand, 23995523 - 23995416
Alignment:
Q  405 ttatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatga 504  Q
    ||||| ||||||||||||| |||||||||||| ||||   ||||||| ||| ||||| |||  |||| |||  | |||||||||  |||||||||||| |    
T  23995523 ttattaattaaaaagttat-atatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacataa 23995425  T
Q  505 tagaaaaac 513  Q
    |||||||||    
T  23995424 tagaaaaac 23995416  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 15190900 - 15190958
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaa 417  Q
    ||||||||  || ||||||||||||||||||||||||||  | |||||||| |||||||    
T  15190900 atgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaa 15190958  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 12332426 - 12332467
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  12332426 tatatatttaatgtaaaatacacaagttccaatataaactta 12332467  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 13761759 - 13761800
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  13761759 tatatatttaatgtaaaatacacaagttccaatataaactta 13761800  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 31613238 - 31613197
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  31613238 tatatatttaatgtaaaatacacaagttccaatataaactta 31613197  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 31705018 - 31705059
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  31705018 tatatatttaatgtaaaatacacaagttccaatataaactta 31705059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 514
Target Start/End: Complemental strand, 39990124 - 39990038
Alignment:
Q  426 tatatttaatataaaacacacaagttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    ||||||||||| ||||  |||||||| ||||| |||||||| ||||  ||| |||||||||||  | |||| ||||||||| |||||||    
T  39990124 tatatttaatagaaaatgcacaagtttcaagacaaacttattattt--aaacttttaacatgtgcacatttacacatgataaaaaaact 39990038  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 40454150 - 40454191
Alignment:
Q  424 tatatatttaatataaaacacacaagttccaagataaactta 465  Q
    |||||||||||| ||||| ||||||||||||| |||||||||    
T  40454150 tatatatttaatgtaaaatacacaagttccaatataaactta 40454191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 3738036 - 3737965
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagtt 421  Q
    ||||||| ||||||||| |||||||| |||||||| ||||  | | |||||| |||||||||||| |||||||    
T  3738036 aacattgcacatgttaaaacaactaatagtagtaacttttt-tcggaaaacaacaattatttattcaaaagtt 3737965  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 421
Target Start/End: Complemental strand, 26265208 - 26265133
Alignment:
Q  348 taacattggacatgttaagacaactaaaagtagtaatttttcatt--gaaaaacatcaattatttattaaaaagtt 421  Q
    |||||||| | ||||||| |||||||| |||||||| ||||  ||  |||||||| |||||||||||| |||||||    
T  26265208 taacattgtatatgttaaaacaactaatagtagtaacttttatttatgaaaaacaacaattatttatttaaaagtt 26265133  T

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Target: scaffold0009 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 362 - 512
Target Start/End: Complemental strand, 191461 - 191316
Alignment:
Q  362 ttaagacaactaaaagtagtaatttttcattgaaaaacat-caattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataa 460  Q
    ||||| ||||||||||| |||||||||||||| ||||||| | ||||||||||||||    |||||||||||||||||||| |||||| |||||||| ||    
T  191461 ttaagccaactaaaagtggtaatttttcattg-aaaacatccgattatttattaaaa----attatatatttaatataaaatacacaa-ttccaagacaa 191368  T
Q  461 acttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | || |||||| |||  | |||||||||  |||||||||||| ||| |||||    
T  191367 atttgtcattttaaatttcttaacatgtgcaaatttgcacataataaaaaaa 191316  T

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Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 512
Target Start/End: Original strand, 43503 - 43641
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaactta-tcatt 470  Q
    |||||||||||||||||||||||||| || |||||||| |||||||     ||||||||||||||||||| | | |||||  ||| |||| ||| |  ||    
T  43503 taaaagtagtaatttttcattgaaaatcaacaattattaattaaaa----gttatatatttaatataaaaaatataagttttaagttaaagttattgctt 43598  T
Q  471 taaaaaatt-ttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    |||||| || ||||||| |  |||||||||||||||| |||||    
T  43599 taaaaacttcttaacatattcaaatttgcacatgataaaaaaa 43641  T

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Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 513
Target Start/End: Original strand, 13113 - 13263
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagat 458  Q
    ||||||||  ||||||||||||||||||||||||||||| || ||||| || |||||||      || ||||||||||||||| |||||| ||||||  |    
T  13113 atgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaa----gctacatatttaatataaaaaacacaaattccaaatt 13208  T
Q  459 aaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    ||| |||  |||| |||  | |||||||||  |||||||||||||||||||||||    
T  13209 aaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13263  T

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Target: scaffold0036 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 514
Target Start/End: Complemental strand, 94179 - 94017
Alignment:
Q  349 aacattggacatgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaa 448  Q
    ||||||| |||||||||  |||||||||||||||| |||| ||||||||  |  ||||||||||||||||   | ||||||||||||| ||||   | ||    
T  94179 aacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaa---actatatatttaatacaaaatgtataa 94083  T
Q  449 gttccaagataaacttatcatttaaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
    |||||||  |||| |||  ||||||||  | ||||||| |  ||||||||||||||||||||||||    
T  94082 gttccaatgtaaagttagtatttaaaacttcttaacatatgcaaatttgcacatgatagaaaaact 94017  T

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Target: scaffold0149 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 512
Target Start/End: Original strand, 22503 - 22641
Alignment:
Q  373 aaaagtagtaatttttc--attgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcatt 470  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||    ||||||||||| ||| || ||| |||||| |||| ||| ||| ||||    
T  22503 aaaagtagtaattttttttattgaaaaacatcaattatttattaaaaag---ctatatatttaacatagaatacaaaagttctaagacaaaattaacatt 22599  T
Q  471 taaaaaattttaacatgtcaaaatttgcacatgatagaaaaa 512  Q
    | |||  | |||||||||  ||||||| |||| |||||||||    
T  22600 ttaaatttcttaacatgtgcaaatttgtacataatagaaaaa 22641  T

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Target: scaffold0305 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 514
Target Start/End: Complemental strand, 18134 - 17995
Alignment:
Q  372 taaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcattt 471  Q
    |||||||||||| | || ||| ||||||| ||||||||||||| ||||   |||||||||||||||||||   |||| |||||| | |||| ||  ||||    
T  18134 taaaagtagtaactcttaattaaaaaacaacaattatttattagaaag---ttatatatttaatataaaatgtacaaattccaatacaaacatactattt 18038  T
Q  472 aaaaaattttaacatgtcaaaatttgcacatgatagaaaaact 514  Q
      || ||||||||| ||  ||||||||| ||||||||||||||    
T  18037 tgaacattttaacacgtgcaaatttgcatatgatagaaaaact 17995  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 513
Target Start/End: Original strand, 182085 - 182220
Alignment:
Q  373 aaaagtagtaatttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagttccaagataaacttatcattta 472  Q
    |||||||||||||||| ||||||||  | ||||||||||||||||     ||| ||||||||||||||| ||||||||| ||| || ||| ||  | ||     
T  182085 aaaagtagtaattttttattgaaaacaaacaattatttattaaaag----ttacatatttaatataaaaaacacaagtttcaa-atcaacgtactacttt 182179  T
Q  473 aaaaattttaacatgtcaaaatttgcacatgatagaaaaac 513  Q
    |||  | |||||||||  |||||| ||||||||||||||||    
T  182180 aaacttcttaacatgtacaaatttacacatgatagaaaaac 182220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 8564 - 8506
Alignment:
Q  359 atgttaagacaactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||| ||||| ||||||| |||||||| |||||||| || |||||||||||||||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaa-caacaattatttattaaaaa 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 455
Target Start/End: Complemental strand, 3571 - 3471
Alignment:
Q  352 attggacatgttaagacaactaaaagtagtaa-tttttcattgaaaaacatcaattatttattaaaaagttattatatatttaatataaaacacacaagt 450  Q
    |||| |||||||||   ||||||||||||||| ||||||||| |||| || |||||||| |||||||     ||| ||||||||||||||| ||| ||||    
T  3571 attgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaag----ttacatatttaatataaaaaacataagt 3476  T
Q  451 tccaa 455  Q
    |||||    
T  3475 tccaa 3471  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 46038 - 45989
Alignment:
Q  369 aactaaaagtagtaatttttcattgaaaaacatcaattatttattaaaaa 418  Q
    ||||||||||||||||||| ||||||| || | ||||||||||| |||||    
T  46038 aactaaaagtagtaattttacattgaagaagaacaattatttataaaaaa 45989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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