View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14132_low_12 (Length: 399)

Name: NF14132_low_12
Description: NF14132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14132_low_12
NF14132_low_12
[»] chr6 (48 HSPs)
chr6 (11-351)||(33041473-33041798)
chr6 (115-304)||(33235996-33236192)
chr6 (116-351)||(9719034-9719271)
chr6 (115-352)||(30487308-30487547)
chr6 (118-355)||(19278039-19278282)
chr6 (110-303)||(1390365-1390566)
chr6 (115-351)||(9721140-9721378)
chr6 (116-289)||(5585304-5585486)
chr6 (115-351)||(14515476-14515713)
chr6 (160-352)||(4097559-4097755)
chr6 (115-230)||(10818343-10818458)
chr6 (110-287)||(34176397-34176581)
chr6 (158-352)||(21606889-21607086)
chr6 (162-352)||(31849112-31849305)
chr6 (115-314)||(1300654-1300862)
chr6 (165-292)||(10348850-10348986)
chr6 (115-314)||(16737998-16738205)
chr6 (237-309)||(2893670-2893742)
chr6 (159-303)||(2892650-2892801)
chr6 (237-351)||(12811112-12811221)
chr6 (186-291)||(13583777-13583890)
chr6 (158-229)||(2900038-2900109)
chr6 (237-308)||(6034204-6034275)
chr6 (116-311)||(26318343-26318546)
chr6 (115-312)||(665843-666054)
chr6 (159-293)||(1395691-1395834)
chr6 (277-351)||(9721141-9721210)
chr6 (115-184)||(10818231-10818300)
chr6 (255-328)||(9298636-9298709)
chr6 (262-351)||(10818232-10818316)
chr6 (158-217)||(9298625-9298685)
chr6 (116-184)||(19278211-19278278)
chr6 (159-351)||(30849960-30850153)
chr6 (160-312)||(2892890-2893053)
chr6 (237-292)||(14548738-14548793)
chr6 (162-212)||(7775996-7776046)
chr6 (277-351)||(9719034-9719103)
chr6 (115-184)||(14515475-14515544)
chr6 (198-280)||(25741476-25741566)
chr6 (272-314)||(1300787-1300829)
chr6 (277-315)||(10818388-10818426)
chr6 (121-186)||(23091129-23091195)
chr6 (158-207)||(31799070-31799120)
chr6 (116-181)||(21607020-21607085)
chr6 (116-184)||(4097686-4097754)
chr6 (278-314)||(21606879-21606915)
chr6 (115-155)||(23090997-23091037)
chr6 (311-351)||(23090998-23091038)
[»] chr3 (54 HSPs)
chr3 (110-351)||(41110318-41110562)
chr3 (115-315)||(24560251-24560459)
chr3 (134-320)||(25654991-25655187)
chr3 (110-352)||(18654597-18654843)
chr3 (158-320)||(220442-220612)
chr3 (133-298)||(52473966-52474139)
chr3 (158-307)||(30200133-30200293)
chr3 (158-314)||(37102194-37102358)
chr3 (158-348)||(21773788-21773981)
chr3 (110-308)||(41039947-41040153)
chr3 (132-314)||(46556178-46556369)
chr3 (119-315)||(27541937-27542141)
chr3 (164-318)||(9312522-9312687)
chr3 (115-274)||(36568906-36569072)
chr3 (115-275)||(16275707-16275875)
chr3 (170-315)||(2387817-2387970)
chr3 (116-218)||(28581189-28581291)
chr3 (117-298)||(37807131-37807321)
chr3 (239-309)||(651771-651841)
chr3 (117-292)||(10748299-10748484)
chr3 (237-304)||(46204931-46204998)
chr3 (237-303)||(14898022-14898088)
chr3 (237-315)||(28582641-28582719)
chr3 (176-308)||(43005804-43005942)
chr3 (237-351)||(6803333-6803442)
chr3 (164-304)||(52185060-52185207)
chr3 (164-297)||(55327422-55327563)
chr3 (237-304)||(54574493-54574560)
chr3 (116-335)||(40463874-40464096)
chr3 (115-184)||(34641163-34641232)
chr3 (243-348)||(10943752-10943852)
chr3 (116-207)||(17474209-17474301)
chr3 (109-184)||(24253895-24253970)
chr3 (110-202)||(26135952-26136044)
chr3 (237-273)||(31684362-31684398)
chr3 (118-181)||(14897981-14898044)
chr3 (110-184)||(220570-220644)
chr3 (117-207)||(17474356-17474446)
chr3 (134-184)||(28582682-28582732)
chr3 (115-184)||(41110494-41110563)
chr3 (243-350)||(12790377-12790478)
chr3 (237-273)||(31894020-31894056)
chr3 (237-309)||(37236963-37237034)
chr3 (115-202)||(13082856-13082943)
chr3 (117-184)||(55428552-55428619)
chr3 (115-197)||(23028086-23028168)
chr3 (116-181)||(6803377-6803442)
chr3 (119-184)||(21773788-21773853)
chr3 (115-184)||(24560219-24560288)
chr3 (277-314)||(30200123-30200160)
chr3 (277-314)||(37102184-37102221)
chr3 (278-315)||(52474088-52474125)
chr3 (136-184)||(30200264-30200312)
chr3 (311-351)||(42772047-42772087)
[»] chr2 (52 HSPs)
chr2 (115-351)||(36347543-36347782)
chr2 (115-314)||(23748130-23748337)
chr2 (113-349)||(8426879-8427110)
chr2 (152-315)||(15224733-15224904)
chr2 (115-351)||(36046206-36046442)
chr2 (158-303)||(39732774-39732926)
chr2 (115-314)||(19566822-19567030)
chr2 (158-314)||(39821704-39821868)
chr2 (156-292)||(16565832-16565978)
chr2 (137-354)||(36566874-36567096)
chr2 (115-292)||(40022427-40022615)
chr2 (119-318)||(12541796-12541999)
chr2 (115-229)||(34209592-34209706)
chr2 (170-304)||(28262500-28262642)
chr2 (116-318)||(31795772-31795982)
chr2 (158-304)||(7681293-7681443)
chr2 (115-229)||(9631688-9631802)
chr2 (152-303)||(29525768-29525931)
chr2 (158-229)||(27926681-27926752)
chr2 (241-351)||(35736178-35736283)
chr2 (164-351)||(9426988-9427179)
chr2 (158-229)||(42316809-42316880)
chr2 (175-264)||(17379897-17379994)
chr2 (162-212)||(1583222-1583272)
chr2 (197-288)||(2241471-2241570)
chr2 (169-298)||(37739949-37740085)
chr2 (243-292)||(9591973-9592022)
chr2 (115-184)||(36347714-36347783)
chr2 (115-207)||(35736337-35736429)
chr2 (115-206)||(887261-887351)
chr2 (238-309)||(41841722-41841793)
chr2 (109-207)||(45257456-45257555)
chr2 (237-303)||(6721754-6721820)
chr2 (113-181)||(9426985-9427053)
chr2 (115-183)||(15224868-15224936)
chr2 (115-191)||(17380007-17380083)
chr2 (115-182)||(34187577-34187644)
chr2 (237-315)||(41778807-41778885)
chr2 (107-184)||(39732901-39732978)
chr2 (248-304)||(27926613-27926669)
chr2 (118-177)||(8427051-8427110)
chr2 (109-184)||(22356177-22356252)
chr2 (115-182)||(31061361-31061428)
chr2 (110-184)||(35736172-35736246)
chr2 (277-351)||(36046207-36046276)
chr2 (170-309)||(39354231-39354378)
chr2 (237-309)||(886958-887028)
chr2 (243-292)||(2381125-2381174)
chr2 (115-208)||(16713494-16713587)
chr2 (239-276)||(32503232-32503269)
chr2 (115-184)||(36046375-36046443)
chr2 (109-181)||(41841678-41841750)
[»] chr4 (53 HSPs)
chr4 (115-351)||(54935070-54935311)
chr4 (115-308)||(27735786-27735987)
chr4 (115-292)||(45741947-45742132)
chr4 (132-351)||(31348340-31348562)
chr4 (110-352)||(5730827-5731073)
chr4 (109-351)||(37711141-37711371)
chr4 (115-309)||(54320474-54320676)
chr4 (115-305)||(49735470-49735668)
chr4 (115-297)||(41174397-41174587)
chr4 (121-297)||(35248738-35248922)
chr4 (176-351)||(26166940-26167118)
chr4 (139-351)||(1968377-1968600)
chr4 (158-352)||(46007744-46007943)
chr4 (115-297)||(24565348-24565536)
chr4 (127-304)||(6891405-6891590)
chr4 (159-288)||(36151637-36151773)
chr4 (158-315)||(47433754-47433919)
chr4 (115-210)||(6938394-6938489)
chr4 (170-278)||(16400871-16400987)
chr4 (121-315)||(17938115-17938318)
chr4 (164-351)||(29798291-29798478)
chr4 (158-229)||(34110933-34111003)
chr4 (158-303)||(44784038-44784190)
chr4 (133-351)||(21694910-21695129)
chr4 (134-279)||(22659268-22659413)
chr4 (164-351)||(2247854-2248042)
chr4 (115-184)||(31348494-31348563)
chr4 (133-305)||(45132517-45132695)
chr4 (158-303)||(28332850-28333003)
chr4 (243-351)||(56135752-56135855)
chr4 (237-292)||(2917095-2917150)
chr4 (158-232)||(36278376-36278450)
chr4 (115-184)||(1968532-1968601)
chr4 (117-184)||(27735749-27735816)
chr4 (116-179)||(46007879-46007942)
chr4 (108-186)||(2247972-2248050)
chr4 (277-351)||(54935241-54935310)
chr4 (118-317)||(55510202-55510407)
chr4 (115-184)||(45132668-45132737)
chr4 (160-201)||(45911327-45911368)
chr4 (115-184)||(54576329-54576398)
chr4 (115-182)||(54935069-54935137)
chr4 (238-298)||(31719966-31720028)
chr4 (263-309)||(2247843-2247889)
chr4 (270-308)||(6938322-6938360)
chr4 (261-307)||(27735901-27735947)
chr4 (115-181)||(47433885-47433951)
chr4 (110-180)||(47846233-47846303)
chr4 (277-351)||(49735471-49735540)
chr4 (237-297)||(22921033-22921094)
chr4 (237-297)||(22970705-22970766)
chr4 (243-292)||(34995108-34995157)
chr4 (115-203)||(37761467-37761555)
[»] chr1 (52 HSPs)
chr1 (117-314)||(8529834-8530039)
chr1 (115-307)||(40094935-40095136)
chr1 (115-351)||(30010335-30010574)
chr1 (110-351)||(12234013-12234257)
chr1 (110-352)||(38509891-38510136)
chr1 (110-351)||(41498407-41498652)
chr1 (115-347)||(2858934-2859169)
chr1 (161-351)||(32951366-32951559)
chr1 (115-351)||(35349468-35349703)
chr1 (165-314)||(50744332-50744490)
chr1 (159-350)||(51597672-51597866)
chr1 (158-309)||(10391912-10392072)
chr1 (158-308)||(49946633-49946791)
chr1 (158-313)||(6563614-6563775)
chr1 (167-304)||(45585739-45585884)
chr1 (110-229)||(43551993-43552108)
chr1 (256-351)||(26324017-26324112)
chr1 (116-229)||(20576136-20576247)
chr1 (116-229)||(7444623-7444736)
chr1 (144-298)||(26940874-26941036)
chr1 (158-272)||(36285619-36285741)
chr1 (109-228)||(28770852-28770969)
chr1 (109-184)||(32951491-32951566)
chr1 (158-229)||(40964726-40964798)
chr1 (237-297)||(44211037-44211097)
chr1 (237-314)||(2470867-2470944)
chr1 (158-265)||(41676363-41676480)
chr1 (243-303)||(43553068-43553129)
chr1 (120-184)||(2859105-2859169)
chr1 (110-177)||(23536777-23536844)
chr1 (110-184)||(35349635-35349709)
chr1 (115-184)||(30010334-30010403)
chr1 (115-180)||(41498406-41498471)
chr1 (110-202)||(2470727-2470819)
chr1 (115-207)||(2506689-2506781)
chr1 (261-309)||(41676437-41676485)
chr1 (117-180)||(35512974-35513037)
chr1 (134-184)||(10391893-10391943)
chr1 (102-184)||(12233999-12234081)
chr1 (277-351)||(12234182-12234251)
chr1 (277-315)||(38509928-38509966)
chr1 (243-292)||(1085628-1085677)
chr1 (115-164)||(20607410-20607459)
chr1 (111-184)||(25268437-25268510)
chr1 (115-212)||(40709294-40709391)
chr1 (255-308)||(49946629-49946682)
chr1 (116-184)||(7444481-7444549)
chr1 (277-309)||(35349504-35349536)
chr1 (116-184)||(38510067-38510135)
chr1 (277-309)||(40094973-40095005)
chr1 (280-308)||(43552037-43552065)
chr1 (237-313)||(49832583-49832659)
[»] chr5 (59 HSPs)
chr5 (115-351)||(13634714-13634953)
chr5 (110-324)||(7544161-7544383)
chr5 (110-315)||(10650463-10650661)
chr5 (115-320)||(26414922-26415136)
chr5 (115-351)||(16938482-16938721)
chr5 (115-287)||(8502837-8503017)
chr5 (118-314)||(36363067-36363271)
chr5 (115-308)||(28279478-28279680)
chr5 (165-314)||(9856915-9857072)
chr5 (115-315)||(37606929-37607136)
chr5 (158-309)||(4373611-4373770)
chr5 (110-308)||(10476067-10476275)
chr5 (116-303)||(9798615-9798810)
chr5 (158-349)||(36392195-36392388)
chr5 (158-303)||(10072692-10072845)
chr5 (115-315)||(37779139-37779345)
chr5 (115-215)||(1657955-1658055)
chr5 (115-229)||(14245090-14245204)
chr5 (115-304)||(37551453-37551647)
chr5 (115-304)||(37654283-37654477)
chr5 (164-318)||(20146917-20147088)
chr5 (159-351)||(16501836-16502033)
chr5 (158-350)||(2550397-2550592)
chr5 (237-292)||(22022907-22022962)
chr5 (159-229)||(20513491-20513561)
chr5 (158-229)||(43535-43607)
chr5 (239-309)||(11756917-11756987)
chr5 (159-274)||(17024270-17024393)
chr5 (158-229)||(22023495-22023568)
chr5 (158-229)||(32727822-32727893)
chr5 (192-292)||(42681510-42681618)
chr5 (115-201)||(14245202-14245288)
chr5 (247-304)||(11419303-11419360)
chr5 (237-298)||(14681520-14681581)
chr5 (237-351)||(40815300-40815408)
chr5 (116-190)||(11757070-11757144)
chr5 (237-303)||(39966084-39966150)
chr5 (115-184)||(13634713-13634782)
chr5 (158-218)||(17780279-17780340)
chr5 (115-184)||(26414895-26414964)
chr5 (164-232)||(4423336-4423404)
chr5 (113-201)||(10650427-10650517)
chr5 (115-182)||(34980812-34980879)
chr5 (261-351)||(1657969-1658054)
chr5 (277-351)||(14245218-14245287)
chr5 (158-223)||(11419237-11419302)
chr5 (158-206)||(2556167-2556215)
chr5 (243-351)||(34980813-34980916)
chr5 (245-315)||(43410-43481)
chr5 (117-176)||(2550533-2550592)
chr5 (237-313)||(14684614-14684692)
chr5 (158-229)||(29002251-29002322)
chr5 (313-351)||(8551621-8551659)
chr5 (115-177)||(10476028-10476090)
chr5 (311-353)||(12600703-12600745)
chr5 (110-180)||(33744190-33744260)
chr5 (115-181)||(40815299-40815365)
chr5 (115-184)||(16938481-16938550)
chr5 (239-319)||(13298296-13298376)
[»] chr8 (50 HSPs)
chr8 (119-315)||(31543078-31543282)
chr8 (121-320)||(11575415-11575621)
chr8 (116-309)||(16652989-16653190)
chr8 (115-314)||(11785561-11785768)
chr8 (159-308)||(1281184-1281341)
chr8 (115-335)||(31738442-31738665)
chr8 (158-324)||(1026894-1027067)
chr8 (158-318)||(7502999-7503167)
chr8 (117-351)||(30479721-30479958)
chr8 (109-304)||(3726859-3727054)
chr8 (158-312)||(29358385-29358547)
chr8 (152-303)||(30664407-30664566)
chr8 (157-315)||(7979174-7979340)
chr8 (115-223)||(34634277-34634385)
chr8 (119-315)||(36308876-36309081)
chr8 (164-292)||(6315119-6315255)
chr8 (158-307)||(37923123-37923280)
chr8 (116-311)||(11033455-11033659)
chr8 (164-351)||(9718530-9718720)
chr8 (175-309)||(37032419-37032561)
chr8 (143-351)||(2248455-2248666)
chr8 (115-308)||(41103506-41103709)
chr8 (165-299)||(28083792-28083934)
chr8 (116-229)||(29690925-29691038)
chr8 (115-304)||(40990183-40990383)
chr8 (237-309)||(42650468-42650540)
chr8 (158-351)||(4247563-4247761)
chr8 (115-184)||(43732860-43732929)
chr8 (133-220)||(10028259-10028347)
chr8 (197-309)||(33922560-33922680)
chr8 (237-303)||(10028156-10028222)
chr8 (159-298)||(13405027-13405178)
chr8 (106-180)||(9718656-9718730)
chr8 (119-184)||(1281149-1281214)
chr8 (116-184)||(16024327-16024394)
chr8 (110-180)||(31543249-31543319)
chr8 (186-220)||(35694828-35694862)
chr8 (243-292)||(12022281-12022330)
chr8 (115-183)||(2248454-2248522)
chr8 (115-182)||(8815316-8815383)
chr8 (115-230)||(24243052-24243164)
chr8 (277-315)||(3726897-3726935)
chr8 (160-206)||(5562012-5562058)
chr8 (117-182)||(7394636-7394701)
chr8 (109-202)||(30365126-30365219)
chr8 (278-315)||(31543106-31543143)
chr8 (237-298)||(38198181-38198241)
chr8 (173-206)||(42919879-42919912)
chr8 (109-185)||(7503126-7503202)
chr8 (117-181)||(11575582-11575646)
[»] chr7 (56 HSPs)
chr7 (115-315)||(41496959-41497167)
chr7 (158-352)||(33655153-33655350)
chr7 (134-304)||(24970187-24970364)
chr7 (115-315)||(47390889-47391098)
chr7 (115-305)||(40196534-40196732)
chr7 (159-314)||(34235053-34235219)
chr7 (116-307)||(42306376-42306571)
chr7 (110-351)||(13770945-13771187)
chr7 (133-351)||(25887195-25887417)
chr7 (133-351)||(1051520-1051739)
chr7 (116-309)||(43230276-43230476)
chr7 (115-229)||(18231714-18231828)
chr7 (119-229)||(4833537-4833647)
chr7 (110-348)||(41008188-41008425)
chr7 (115-284)||(45940658-45940835)
chr7 (241-351)||(39856001-39856106)
chr7 (160-314)||(17852906-17853067)
chr7 (159-320)||(34228364-34228534)
chr7 (165-292)||(40572287-40572421)
chr7 (118-229)||(10315761-10315872)
chr7 (186-314)||(37417706-37417842)
chr7 (158-229)||(32872826-32872897)
chr7 (115-229)||(13425122-13425236)
chr7 (170-268)||(22163167-22163272)
chr7 (170-268)||(22221875-22221980)
chr7 (116-352)||(26365769-26366009)
chr7 (237-351)||(31571600-31571711)
chr7 (115-201)||(48881560-48881646)
chr7 (251-308)||(23029480-23029537)
chr7 (115-184)||(39856038-39856107)
chr7 (115-195)||(36267555-36267635)
chr7 (164-303)||(42087041-42087188)
chr7 (115-184)||(31571643-31571712)
chr7 (250-314)||(10315648-10315712)
chr7 (160-228)||(19835838-19835906)
chr7 (110-218)||(31553182-31553287)
chr7 (115-292)||(33519105-33519290)
chr7 (169-229)||(47229888-47229948)
chr7 (237-297)||(48152036-48152092)
chr7 (115-184)||(13771119-13771188)
chr7 (115-184)||(28074105-28074174)
chr7 (115-232)||(30592255-30592372)
chr7 (115-184)||(34228492-34228561)
chr7 (229-298)||(38378096-38378165)
chr7 (262-315)||(40196566-40196619)
chr7 (160-207)||(2087786-2087833)
chr7 (158-197)||(30891039-30891078)
chr7 (115-182)||(37925843-37925910)
chr7 (110-180)||(47390852-47390922)
chr7 (243-293)||(48013558-48013608)
chr7 (237-298)||(18795727-18795788)
chr7 (310-351)||(28074106-28074147)
chr7 (277-309)||(33655148-33655180)
chr7 (116-180)||(33655285-33655349)
chr7 (157-185)||(34235180-34235208)
chr7 (243-351)||(37925844-37925947)
[»] scaffold0067 (3 HSPs)
scaffold0067 (109-315)||(39182-39400)
scaffold0067 (115-184)||(39363-39432)
scaffold0067 (277-351)||(39189-39259)
[»] scaffold0262 (1 HSPs)
scaffold0262 (119-309)||(16302-16500)
[»] scaffold0171 (1 HSPs)
scaffold0171 (134-304)||(15995-16173)
[»] scaffold0096 (2 HSPs)
scaffold0096 (160-320)||(6613-6780)
scaffold0096 (110-181)||(6581-6652)
[»] scaffold0341 (1 HSPs)
scaffold0341 (158-313)||(18807-18968)
[»] scaffold0294 (1 HSPs)
scaffold0294 (112-292)||(15320-15507)
[»] scaffold0026 (2 HSPs)
scaffold0026 (152-352)||(1174-1377)
scaffold0026 (116-184)||(1175-1243)
[»] scaffold0198 (1 HSPs)
scaffold0198 (116-201)||(3150-3235)
[»] scaffold0007 (1 HSPs)
scaffold0007 (117-207)||(242366-242456)
[»] scaffold0240 (1 HSPs)
scaffold0240 (115-181)||(17716-17780)
[»] scaffold0012 (1 HSPs)
scaffold0012 (117-180)||(184784-184847)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 33041798 - 33041473
Alignment:
Q  11 cacagacattaatattgtgaacttacttggtgttatttagttgtggtgagagtaatgtttcattgtctcatttagtttgagttacttaaaaatggttgtt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33041798 cacagacattaatattgtgaacttacttggtgttatttagttatggtgagagtaatgtttcattgtctcatttagtttgagttacctaaaaatggttgtt 33041699  T
Q  111 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 210  Q
    |||||||||||||||||||||||||||||||||||||           |||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  33041698 ttatggtgtgtttggatggaaagtttaggaggggaag----------atttattttttatttttaaattacggatactatgaaatgttttttaaaaagtt 33041609  T
Q  211 aacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 310  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||||||||      |    
T  33041608 aacatattaacatgataaataacacttcaatcacacttaatttattttaaaaaaacacattatatagtctataatttaaaaatgaaaaataaa-----tt 33041514  T
Q  311 ctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||  |||| ||| |||||| |||||||||||||||    
T  33041513 ctcccctcctttcctctcctaaacccccaatccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 115 - 304
Target Start/End: Complemental strand, 33236192 - 33235996
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||| |||||||||| |||||| ||| |||| ||| ||||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33236192 ggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat-ttttttaaaaagttaaca 33236094  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||||||||||||        ||||  | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  33236093 tattaacatgataaacaatcatataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaac 33235996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 116 - 351
Target Start/End: Original strand, 9719034 - 9719271
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||| ||  |||||||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaacat 9719133  T
Q  216 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |||||  ||||||        |||| || ||||||||||| |||||| |||| |||| |||||||||||||||| |||||||||| ||||| ||||||      
T  9719134 attaatttgataaacaatcatataatacttcaatcacactaaatttaattta-aaaagcatgttatatagtccggaatttaaaaaagaaaattaaacc-- 9719230  T
Q  308 cctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
       | |||||||||||||||||||||||  ||||||||||||||    
T  9719231 ---cacccctctcttcccctcataaaccctcaatccaaacacac 9719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 115 - 352
Target Start/End: Original strand, 30487308 - 30487547
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||| |||||||| ||| | |||||||| | ||||||||||| ||||    
T  30487308 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta-ggacagtatgaaatgtcttttaaaaagtcaaca 30487406  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  |||| |||||||    
T  30487407 tattaacatgataaacaataatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtagtttaaaaaataaaactaaaccc 30487506  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacact 352  Q
    ||| ||||     ||||||||| ||||||  ||||| |||||||||    
T  30487507 tccactcc-----cttcccctcctaaaccctcaatcgaaacacact 30487547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 355
Target Start/End: Original strand, 19278039 - 19278282
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    |||||||||||||  |||||||||||||||| | | ||  |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatattttttaaaaagttgacatat 19278138  T
Q  218 ----taacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
        ||||||||||||        | | || ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  19278139 atattaacatgataaacgatcatatgatacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaatttaaaaaag-aaaataaacc 19278237  T
Q  306 ctcctctcccctctcttcccctcataaacctccaatccaaacacacttaa 355  Q
         |||||||| ||||||||| |||||   ||||||||||||||||||    
T  19278238 -----ctcccctcccttcccctcctaaactctcaatccaaacacacttaa 19278282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 110 - 303
Target Start/End: Complemental strand, 1390566 - 1390365
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| |||||||||||||| |  |||||||||||||| ||| | |    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1390566 tttaaggtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattactgacactatgaaatattttttaaaaagt 1390467  T
Q  210 taacatattaacatgata-------aataacacctcaatcacacttaatttattttagaa-aaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    ||||||||||||||||||       ||||| |  ||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||| ||||| ||    
T  1390466 taacatattaacatgataaatgatcaataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattttaaaaagaaaatta 1390367  T
Q  302 aa 303  Q
    ||    
T  1390366 aa 1390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 115 - 351
Target Start/End: Original strand, 9721140 - 9721378
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9721140 ggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatggaatgttttttaaaaagttaaca 9721239  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||  ||||||        |||| || ||||||||||| | |||| |||| ||||||||||||||| ||||| |||||||||| ||||| ||||||     
T  9721240 tattaatttgataaacaatcatataatacttcaatcacactaactttaattta-aaaaacatgttatatggtccggaatttaaaaaagaaaattaaacc- 9721337  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        | |||||||||| || |||||||||  |||| |||||||||    
T  9721338 ----cacccctctcttaccttcataaaccctcaattcaaacacac 9721378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 116 - 289
Target Start/End: Original strand, 5585304 - 5585486
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttactttt-catttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||||  |||||||||||||||| |||| |  |||||||||| | ||||||||||||| | |||||||||| |||||||||||| |||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaatgttttttaaaaaggtaaca 5585403  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 289  Q
    ||||||||| ||||        | || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5585404 tattaacataataaacgattatacaatatttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 5585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 115 - 351
Target Start/End: Complemental strand, 14515713 - 14515476
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||| | ||||  |||||  |||||||||||||||| | | ||||| ||||||||||| || ||||||||    
T  14515713 ggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatattttttgaagagttaaca 14515614  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||| ||||||||||        |||| || ||| ||||||||||||||||||||| |||||  |||| |||||||||||||||||| |||||| |||||     
T  14515613 tatgaacatgataaatgataatataatacttcattcacacttaatttattttagagaaaca--ttatctagtccgtaatttaaaaaagaaaaacaaacc- 14515517  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  14515516 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 14515476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 352
Target Start/End: Original strand, 4097559 - 4097755
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaat 251  Q
    |||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  4097559 ttacttttaatttttaaattacggacactttgaaatgttttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttaat 4097658  T
Q  252 ttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 350  Q
    ||||||| | ||||| ||||||||| |||||||||||||||| ||||| | ||||     || ||||| ||||||||| ||||||  |||||||||||||    
T  4097659 ttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacc-----cttccctcccttcccctcttaaaccctcaatccaaacaca 4097753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 10818458 - 10818343
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| || ||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||    
T  10818458 ggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaaca 10818359  T
Q  215 tattaacatgataaat 230  Q
    ||||||||||||||||    
T  10818358 tattaacatgataaat 10818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 287
Target Start/End: Complemental strand, 34176581 - 34176397
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggagggga-agggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    |||||||||||||||||||||  ||||| ||||| | || |||| ||  ||||| ||||||||||||||||||||| |||||||||||||||||  ||||    
T  34176581 tttatggtgtgtttggatggagggtttatgagggaagagagatgaga--gtttagttttcatttttaaattacggacactatgaaatattttttttaaag 34176484  T
Q  209 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 287  Q
    ||||||||||||||| ||||        |||| ||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  34176483 ttaacatattaacataataaacgatcgtataatactgcaatcacacttgatttattttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 158 - 352
Target Start/End: Original strand, 21606889 - 21607086
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||        |||| || ||| ||||||||     
T  21606889 gtttacttttcatttttaaattacggaaactatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcagtcacacttt 21606988  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 349  Q
    ||||||||||||||||||| | |||||||  |||||||||||| ||||  |||||  || |     ||||||||||||| ||||||  ||||||||||||    
T  21606989 atttattttagaaaaacatataatatagtttgtaatttaaaaacgaaatgtaaacattcat-----ctctcttcccctcctaaaccctcaatccaaacac 21607083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 162 - 352
Target Start/End: Complemental strand, 31849305 - 31849112
Alignment:
Q  162 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaattt 253  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||| ||||||||||||| |||||||        ||| || |||||||||||| ||||    
T  31849305 acttttcatttttaaattacggacactataaaatgtcttttaaaaaattaacatattaacgtgataaacaataatataatacttcaatcacacttgattt 31849206  T
Q  254 attttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 352  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||||| ||||||||    
T  31849205 attttagaaaaatatgttatatagtctgtagtttaaaaaagaaaactaaacc-----ctcccctcccttcccctcttaaaccctcaatcctaacacact 31849112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 115 - 314
Target Start/End: Complemental strand, 1300862 - 1300654
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||| | ||  ||| ||| ||||  ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  1300862 ggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatattttataaaaagttaaca 1300763  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttat-tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||||||| ||||||        |||| || ||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||   ||| ||||||    
T  1300762 tattaacctgataaacaatcatataatacttcaatcacacttaatttatcttgaaaaaaatatgttatataatccgtaatttaaaaacataaagtaaacc 1300663  T
Q  306 ctcctctcc 314  Q
    |||| ||||    
T  1300662 ctcccctcc 1300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 292
Target Start/End: Original strand, 10348850 - 10348986
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 256  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |||||        |||| || |||||| ||||| | |||||    
T  10348850 tttcatttttaaattacggataatatgaaatatcttttaaaaagttaacatattaatacgataaacgataatataatacttcaatcgcacttgaattatt 10348949  T
Q  257 tt-agaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    || | ||||||||||||||||||||||||||||||||    
T  10348950 ttaaaaaaaacatgttatatagtccgtaatttaaaaa 10348986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 314
Target Start/End: Original strand, 16737998 - 16738205
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||| ||||| || |||||  |||||||||| ||||||||||| ||| |||||||||| |||||| | || |||| |    
T  16737998 ggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatgttttttgataaattaaaa 16738097  T
Q  215 tattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    || |||||||||        | |||| || | ||| ||||||| |||||||||||||||||| ||||||| || |||||||||||| ||||| ||||| |    
T  16738098 taataacatgatatacgatcatataatacttaaataacacttactttattttagaaaaacattttatataatctgtaatttaaaaaagaaaagtaaactc 16738197  T
Q  307 tcctctcc 314  Q
    ||| ||||    
T  16738198 tcccctcc 16738205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 2893742 - 2893670
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||| ||||    
T  2893742 tcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaactctcc 2893670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 303
Target Start/End: Original strand, 2892650 - 2892801
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 250  Q
    |||||||||  || |||||||||| | ||||||| |||||||||||||| |||| ||| ||||||||||||        ||| |  ||||||||||| ||    
T  2892650 tttactttttgttgttaaattacgcacactatgagatattttttaaaaa-ttaaaataataacatgataaacaatcatataatatttcaatcacactaaa 2892748  T
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| ||||    
T  2892749 tttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaa 2892801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 12811112 - 12811221
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 336  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||| | ||||| ||| ||     ||||||||||||||| || ||||||     
T  12811112 tcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatcc-----ctcccctctcttcccatcctaaaccc 12811206  T
Q  337 ccaatccaaacacac 351  Q
     ||||||||||||||    
T  12811207 tcaatccaaacacac 12811221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 13583890 - 13583777
Alignment:
Q  186 actatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatag 277  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||        || |  ||||||||||||||||||||||||||||||||||||||||     
T  13583890 actatgaaatgttttttaaaaaattaacatgttaacataataaatgatcatataatatttcaatcacacttaatttattttagaaaaacatgttatataa 13583791  T
Q  278 tccgtaatttaaaa 291  Q
    || |||||||||||    
T  13583790 tctgtaatttaaaa 13583777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 2900109 - 2900038
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||||  || |||||||||| |||| ||| ||||||||||||||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaatgttttataagaagttaacatattaacatgataaa 2900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 6034204 - 6034275
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||| |||| ||||    
T  6034204 tcaatcacacttaatttattttagaaaaacatgttatacagtctgcaatttaaaaaagaaaagtaaatcctc 6034275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 311
Target Start/End: Complemental strand, 26318546 - 26318343
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||||| |||||||||||| |||||| |||||  |||||||||| ||||||||||| ||||  ||| ||||   ||||| ||| || |  |    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaatt 26318447  T
Q  216 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |  ||||||||||        |||| || ||||  ||||||||||||||||| |||||||| ||||||  | |||||||||||||  |||||| ||||||    
T  26318446 aacaacatgataattgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttttcgtaatttaaaaaataaaaatgaaccct 26318347  T
Q  308 cctc 311  Q
    ||||    
T  26318346 cctc 26318343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 312
Target Start/End: Original strand, 665843 - 666054
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt-aac 213  Q
    |||||||||||||| |  ||||||||||||||| || ||||  ||| | ||||||||||||||||| | ||| |||||||| | ||||||||| || |||    
T  665843 ggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtcttttaaaaattttaac 665941  T
Q  214 atattaacatgataaat--------aacacctcaatcacacttaatttattttaga------aaaacatgttatatagtccgtaatttaaaaatgaaaaa 299  Q
    |||||||||||||||||        || || |||| |||||||||||| |||||        |||||||||| ||||||| ||| |||||||| ||||||    
T  665942 atattaacatgataaatgatgatataatacttcaaccacacttaattttttttattttttataaaacatgttgtatagtctgtagtttaaaaaagaaaaa 666041  T
Q  300 taaaccctcctct 312  Q
    ||||| |||||||    
T  666042 taaactctcctct 666054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 1395834 - 1395691
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac--------acctcaatcacacttaa 250  Q
    |||||||||||||||||||||||  | ||| |  ||| ||||||||||| ||||||||||| |||||||||| |         |  ||||||||||||||    
T  1395834 tttacttttcatttttaaattactaacactgtagaatgttttttaaaaaattaacatattagcatgataaatgatcatgtattatttcaatcacacttaa 1395735  T
Q  251 tttattttagaaaaa-catgttatatagtccgtaatttaaaaat 293  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||    
T  1395734 tttattttataaaaaacatgttacatagtccgtaattaaaaaat 1395691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 9721210 - 9721141
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||||||||||||||||     |||||||| ||||||||| ||||||| ||||||||||||||    
T  9721210 gtccgtaatttaaaaatgaaaaataaacc-----ctcccctcccttcccctcctaaaccttcaatccaaacacac 9721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 10818231 - 10818300
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  10818231 ggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacgga 10818300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 9298636 - 9298709
Alignment:
Q  255 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctc 328  Q
    ||||| |||||||| | |||  ||||||||||||||| |||||| |||||||||| |||||||| |||||||||    
T  9298636 ttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcccctcccttcccctc 9298709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 10818316 - 10818232
Alignment:
Q  262 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||| |||||||||||||||| ||||||||||     |  ||||||| ||||||||| ||||||  ||||||||||||||    
T  10818316 aaaacatgttatattgtccgtaatttaaaaaagaaaaataaa-----caatcccctcccttcccctcctaaaccctcaatccaaacacac 10818232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 9298685 - 9298625
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatat 217  Q
    |||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||    
T  9298685 gtttacttttcaattttaaattacggacattatgaaatgtttttttaaaaagttaacatat 9298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 19278278 - 19278211
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacgga 19278211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 351
Target Start/End: Original strand, 30849960 - 30850153
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    ||||| |||| ||||||||||||| ||||||| |||||||||||||||  |||| ||| |||||||||||        |||| || ||||| | ||| ||    
T  30849960 tttacatttcgtttttaaattacgcatactataaaatattttttaaaa--ttaaaataataacatgataaacgatcatataatacttcaattatactaaa 30850057  T
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 350  Q
    ||| ||||| |||||||| ||||||| | | ||||||||||   |||| ||||     ||||||| |||||| ||||| ||||||  |||||||||||||    
T  30850058 tttgttttaaaaaaacatattatataattcataatttaaaataaaaaagtaaa-----ctctcccttctctttccctcctaaaccctcaatccaaacaca 30850152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 312
Target Start/End: Original strand, 2892890 - 2893053
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactt--a 249  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||| ||  ||| ||| ||||||||||||        ||| || |||||||||||   |    
T  2892890 ttactttttgtttttaaattacgcacactatgaaatattttgtaagaaagtaaaataataacatgataaacgatcatataatacttcaatcacactataa 2892989  T
Q  250 atttattttagaaaa-acatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctct 312  Q
    |||||||| | |||| | || ||||||||| ||||||||||||| ||||| |||||||||||||    
T  2892990 atttatttaaaaaaatatattttatatagttcgtaatttaaaaaagaaaagtaaaccctcctct 2893053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 14548738 - 14548793
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||| ||||||||||||| || ||||| |||||| ||||||||||||||||    
T  14548738 tcaatcacagttaatttattttaaaataacattttatattgtccgtaatttaaaaa 14548793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 7775996 - 7776046
Alignment:
Q  162 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||    
T  7775996 acttttcattttaaaattacgaacactataaaatattttttaaaaagttaa 7776046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 9719103 - 9719034
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||||||||||||||||||||| |     |||||||| ||||||||| ||||||  ||||||||||||||    
T  9719103 gtccgtaatttaaaaatgaaaaataaatc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 14515475 - 14515544
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  14515475 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 14515544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 280
Target Start/End: Complemental strand, 25741566 - 25741476
Alignment:
Q  198 tttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtcc 280  Q
    ||||||||||||||||||| ||| ||||||||        ||| || ||| |||| |||||||||||||| ||||||||||||||||||||    
T  25741566 tttttaaaaagttaacataataatatgataaacgatcatataaaacttcagtcacgcttaatttattttaaaaaaacatgttatatagtcc 25741476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 1300787 - 1300829
Alignment:
Q  272 atatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||| |||||||||||||||||||||| |||||||||| ||||    
T  1300787 atattgtccgtaatttaaaaatgaaaagtaaaccctcccctcc 1300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 10818388 - 10818426
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  10818388 gtccgtaatttaaaaatgaaaagtaaaccctcccctccc 10818426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23091195 - 23091129
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttc-atttttaaattacggata 186  Q
    ||||||||||  |||||||||||||||||| ||||  | |||||||||  |||||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggata 23091129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 31799120 - 31799070
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 207  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaa 31799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 21607085 - 21607020
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||||| ||  ||||||||||||||| ||   |||||||||| |||| ||||||||||||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattac 21607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 4097754 - 4097686
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||| ||  ||||| |||||||||||| || |  ||| ||||||| |||||||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacgga 4097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 21606915 - 21606879
Alignment:
Q  278 tccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  21606915 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 21606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 23090997 - 23091037
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatggga 155  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    
T  23090997 ggtgtgtttggattgaaggtttaggaggggaagggagggga 23091037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 351
Target Start/End: Complemental strand, 23091038 - 23090998
Alignment:
Q  311 ctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  23091038 ctcccctcccttcccctcctaaaccttcaatccaaacacac 23090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 110 - 351
Target Start/End: Original strand, 41110318 - 41110562
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41110318 tttatggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaatattttataaaaagt 41110417  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    |||||||||||||||||||        |||| || |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||    
T  41110418 taacatattaacatgataaacaatcatataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaacgaaaagta 41110517  T
Q  302 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||| ||||||||     |||||||||| |||||  ||||||||||||||    
T  41110518 aaccttcctctcc-----cttcccctcacaaaccctcaatccaaacacac 41110562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 315
Target Start/End: Complemental strand, 24560459 - 24560251
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24560459 ggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaagttaaca 24560360  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  24560359 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccc 24560260  T
Q  307 tcctctccc 315  Q
    ||| |||||    
T  24560259 tcccctccc 24560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 134 - 320
Target Start/End: Original strand, 25654991 - 25655187
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat--- 230  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||| | |||| ||||| |||||| || |||||||||||||| |||||||||       
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaatgttttttgaagagttaacatattaatatgataaatgat 25655090  T
Q  231 -------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 320  Q
           || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  25655091 catatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaagttaaaccctcccctcccttctc 25655187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 110 - 352
Target Start/End: Original strand, 18654597 - 18654843
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  18654597 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 18654696  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||    
T  18654697 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaa----aaaagta 18654792  T
Q  302 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 352  Q
    || |   |||||||||| ||||||||| ||||||  |||| ||||||||||    
T  18654793 aaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacact 18654843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 320
Target Start/End: Original strand, 220442 - 220612
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||        ||||||| ||||||| ||||     
T  220442 gtttagttttcatttttaaattacggacattatgaaatgttttttaaaaagttaacatattaacataataaacaatcttataacacttcaatcatacttg 220541  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 320  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||  |||| ||||| ||||    
T  220542 atttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctc 220612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 133 - 298
Target Start/End: Complemental strand, 52474139 - 52473966
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 228  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||        
T  52474139 gtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatattttgtaaaaagttaacatattaatatgataaacag 52474040  T
Q  229 ----ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
        |||| || |||||||||  |||||||||||| || ||||||||||||| ||||||||||||||| |||||    
T  52474039 tcatataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaagaaaa 52473966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 30200133 - 30200293
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac-----------acctcaatcacac 246  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||| |||           || | ||||||||    
T  30200133 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaacataataaacaacgatcatatagtactttaatcacac 30200232  T
Q  247 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  30200233 ttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccct 30200293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 37102194 - 37102358
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa-------ataacacctcaatcacacttaa 250  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||       |||| || |||| ||||||| |    
T  37102194 gtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacataataacgatcatataatacttcaaccacacttga 37102293  T
Q  251 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||||||| |||||||||||||||||||||||||||||||| || || |||||| ||| ||||    
T  37102294 tttattttagaaaaaacatgttatatagtccgtaatttaaaaaagataagtaaaccttcccctcc 37102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 21773981 - 21773788
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 249  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||||||||||||||||| ||||||||||        |||  | |||||||||||||    
T  21773981 gtttactttttatttttaaattacgaacactaggaaatgttttttaaaaagttaacatatttacatgataaacaatcatataattcttcaatcacactta 21773882  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 348  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||     || || || ||||||||| ||||||| |||||||||||    
T  21773881 atttattttagaaaaacatgttatatagtccgtaatttagaaaagaaaagtatacc-----cttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 110 - 308
Target Start/End: Original strand, 41039947 - 41040153
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||| ||||||||||||||| ||  | |   |||| |||||| ||||||||||| || ||||||||||||||| ||||||||    
T  41039947 tttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatattttataaaaagt 41040046  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    |||||||||||||||||||        |||| || |||||||| |||| ||||||||| |||| |||||||| || ||||||||||||||  ||||| ||    
T  41040047 taacatattaacatgataaacaatcatataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagcgaaaagta 41040146  T
Q  302 aaccctc 308  Q
    |||||||    
T  41040147 aaccctc 41040153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 132 - 314
Target Start/End: Complemental strand, 46556369 - 46556178
Alignment:
Q  132 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatg------- 224  Q
    |||||||||| |||| ||| ||||  ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||           
T  46556369 agtttaggagaggaatggaggggag-gtttacttttcatttttcaattacggacactatgacatattttttaaaaagttaagatattaacatgacaaacg 46556271  T
Q  225 ---ataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
       ||| |||| || ||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||| ||||| ||||| |||| ||||    
T  46556270 gtcatatataatacttcaatcacactcaatttattttggaaaaacatattatatagtctgtaatttaaaaaagaaaattaaactctcccctcc 46556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 27541937 - 27542141
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||| ||  |||||||||||||||||| | ||  ||| || ||||||||||||||||  || ||||||||||| || |||||||  |||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaatacttgttaaaaatctaacatatt 27542036  T
Q  219 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 310  Q
    ||||||||||        |||| || ||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||| |||||| |||| ||||     
T  27542037 aacatgataaacgatcatataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaaacaaactctccc 27542136  T
Q  311 ctccc 315  Q
    |||||    
T  27542137 ctccc 27542141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 9312522 - 9312687
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 255  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||        |||| ||   |||||||||||||||||    
T  9312522 ttttcatttttaaattacagacactatgaaatattttgtaaaaagttaacatattaacatgataaacaatcatataatactcaaatcacacttaatttat 9312621  T
Q  256 tttagaaaaac---atgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 318  Q
    ||||||||| |   ||||||||||||| |||||||||||| |||||  ||||||||| ||||||||    
T  9312622 tttagaaaatcatgatgttatatagtcggtaatttaaaaaagaaaatcaaaccctcccctcccctc 9312687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 274
Target Start/End: Original strand, 36568906 - 36569072
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  ||||| |||||||||||||||| || | |||||||||| ||||| ||||||||||||    
T  36568906 ggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaatgtttttcaaaaagttaaca 36569004  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttata 274  Q
    ||||||||||||||        |||| |  ||||||||||||||||||||||||||||||||| ||||    
T  36569005 tattaacatgataaacaatcgtataatagttcaatcacacttaatttattttagaaaaacatgatata 36569072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 115 - 275
Target Start/End: Original strand, 16275707 - 16275875
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||  |||| |||||| ||||  ||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||||||     
T  16275707 ggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaatgttttataaaaagttaact 16275806  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatat 275  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||||||||||||||||||||    
T  16275807 tattaacatgataaacaaccatataatacttcaatcacacttgatttattttagaaaaacatgttatat 16275875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 315
Target Start/End: Original strand, 2387817 - 2387970
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 261  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||| ||| ||||||||||||        ||| |  | |||||||||||||||||||||||    
T  2387817 tttttaaattacggacactatggaatgttttttaataagttaaaataataacatgataaacgatcatataataatttaatcacacttaatttattttaga 2387916  T
Q  262 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    |||||||||||||||| |||| ||||| ||| ||||| |||||||||| |||||    
T  2387917 aaaacatgttatatagaccgtgatttagaaaagaaaagtaaaccctcccctccc 2387970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 28581189 - 28581291
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||||||  |||||| || |||||||| ||||  ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattacagatattgtgaaatattttttaaaaagttaacat 28581288  T
Q  216 att 218  Q
    |||    
T  28581289 att 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 117 - 298
Target Start/End: Complemental strand, 37807321 - 37807131
Alignment:
Q  117 tgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||| |||||  |||||||||||| ||| || |  |||||||||||||| ||||||||||  ||| |||||||||| |||||||||||||||| ||    
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatgttttttaaaaagttaatat 37807222  T
Q  216 attaacatgataa--------ataacacctcaatcacacttaa-tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
    |||||||||||||        |||| || |||||||||||||| ||||||||  ||||| |||||||||||| |||| |||||||| |||||    
T  37807221 attaacatgataaacgatcatataatacttcaatcacacttaattttattttttaaaaa-atgttatatagttcgtagtttaaaaaagaaaa 37807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 651841 - 651771
Alignment:
Q  239 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  651841 aatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctcc 651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 292
Target Start/End: Original strand, 10748299 - 10748484
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 216  Q
    ||||||||||||||  ||||||||||||||||||   ||  ||||||     |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggagaagagagtttac-----atttttaaattacgggcattataaaatgttttttaaaaagttaacata 10748393  T
Q  217 ttaacatgataaat---------------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||               || || |  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10748394 ttaacatgataaatgataaaaggtcatataatacttttatcacacttaatttattttagaaaaacatgttatatactccgtaatttaaaaa 10748484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 304
Target Start/End: Complemental strand, 46204998 - 46204931
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| |||||    
T  46204998 tcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaac 46204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 14898088 - 14898022
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||    
T  14898088 tcaatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaaaagtaaa 14898022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 28582641 - 28582719
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    |||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||    
T  28582641 tcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctcccctccc 28582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 43005804 - 43005942
Alignment:
Q  176 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaaca 267  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||        |||| || ||||||| | | ||||||||||||||||| |    
T  43005804 aattacggat--tatgaaatattttttaaaaagttaacatattaatatgataaaatatcatataatacttcaatcaaattaaatttattttagaaaaata 43005901  T
Q  268 tgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    |||||||||||  | |||||||||| ||||| |||| ||||    
T  43005902 tgttatatagtttggaatttaaaaaagaaaattaaatcctc 43005942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 6803333 - 6803442
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 336  Q
    |||||||||| |||||||||||| |||||| | ||  |||||| |||||||||||| ||||| ||||     ||||| |||||||||||||| |||||||    
T  6803333 tcaatcacacataatttattttataaaaacttattgcatagtctgtaatttaaaaaagaaaattaaa-----ctctctcctctcttcccctcctaaacct 6803427  T
Q  337 ccaatccaaacacac 351  Q
     ||||||||||||||    
T  6803428 tcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 304
Target Start/End: Complemental strand, 52185207 - 52185060
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 255  Q
    |||| |||||||||||| ||| ||||  ||||||||| |||||||||||||||||||||||||||        |||| || ||||| | | |||||||||    
T  52185207 tttttatttttaaattatggacacta--aaatattttataaaaagttaacatattaacatgataaacaatcatataatacttcaattatatttaatttat 52185110  T
Q  256 tttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||| |||||||||||||||| |  |||||||||||| ||||| |||||    
T  52185109 tttagaaaaaacatgttatataatttgtaatttaaaaacgaaaagtaaac 52185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 55327563 - 55327422
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 255  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||||| | ||||||||| |||||        |||  | ||||||||| || ||||||    
T  55327563 ttttcgtttttaaatcacggacattatgaaatgttttttaaaaagttagcgtattaacataataaacgaacatataatgcttcaatcacatttgatttat 55327464  T
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    || |||||| |||||||| |||||||||||||||||| ||||    
T  55327463 ttaagaaaagcatgttatgtagtccgtaatttaaaaaagaaa 55327422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 54574493 - 54574560
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||| ||||    
T  54574493 tcaatcacgcttaatttattttagaaaaacgtgttatatagtctgtaattaaaaaaagaaaaacaaac 54574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 335
Target Start/End: Original strand, 40463874 - 40464096
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |  ||||| ||||  ||  |||| || ||| |||||||||||||||||||||||| ||||| || | ||||||||||  |||| |     
T  40463874 gtgtgtttggatgaagggtttatgaggataaacgatgagagtgtgtacttttcatttttaaattacggacactataaattgttttttaaaatattaaaac 40463973  T
Q  216 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    | ||||||||||||        ||| |  |||||| |||||||||||||||||||||| ||||||| ||| || | ||||| ||| ||||| ||||        
T  40463974 aataacatgataaacaatcatataaaaattcaatctcacttaatttattttagaaaaatatgttatgtagcccttgatttagaaaagaaaagtaaa---- 40464069  T
Q  308 cctctcccctctcttcccctcataaacc 335  Q
     ||||||||||| |||| ||||||||||    
T  40464070 -ctctcccctctattcctctcataaacc 40464096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 34641232 - 34641163
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| |||||||||||||||    
T  34641232 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 10943752 - 10943852
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 342  Q
    ||||||||||||||||| |||||||| ||  || || |||||||||||||| |||| | ||||     |||||||||||| ||||||||||||  |||||    
T  10943752 acacttaatttattttaaaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaacc-----ctcccctctctttccctcataaaccctcaatc 10943846  T
Q  343 caaaca 348  Q
    ||||||    
T  10943847 caaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 17474209 - 17474301
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 207  Q
    |||||||||||| ||  ||||||||||| |||  |||| || ||||||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaa 17474301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 24253970 - 24253895
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatg-tttacttttcatttttaaattacgga 184  Q
    ||||| ||||||||||||||||  |||||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaaggga-gggaaggatttacttttcttttttaaattacgga 24253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 26136044 - 26135952
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    |||| |||||| ||| |||||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||||| | ||| ||||| |||||    
T  26136044 tttaaggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttt 26135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 31684398 - 31684362
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttat 273  Q
    |||||||||||||||||||||||||||||||||||||    
T  31684398 tcaatcacacttaatttattttagaaaaacatgttat 31684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||| || |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 220644 - 220570
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||| ||| ||||||||||||  |||||||||| ||||||| ||||   |||||||||| |||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacgga 220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 17474446 - 17474356
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||||| ||  ||| |||||||||||||| ||||  ||| ||||||  ||||||||||||| ||| | | ||||||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaa 17474356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 28582732 - 28582682
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  28582732 tttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 28582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 41110563 - 41110494
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||| |||||||||||||||    
T  41110563 ggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacgga 41110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 350
Target Start/End: Complemental strand, 12790478 - 12790377
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 342  Q
    |||||||||||||| |||||||||||||||||||| |   ||| |||||| ||||| |||||      |||| ||||||||| ||| ||||||  |||||    
T  12790478 acacttaatttattatagaaaaacatgttatatagcctacaatataaaaaagaaaagtaaac------ctcctctctcttcctctcctaaaccctcaatc 12790385  T
Q  343 caaacaca 350  Q
    ||||||||    
T  12790384 caaacaca 12790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 31894020 - 31894056
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttat 273  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31894020 tcaatcacatttaatttattttagaaaaacatgttat 31894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 37237034 - 37236963
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||||||||||||||||||  |||||||| || ||  ||| |||||||||||||||||| ||| ||||||    
T  37237034 tcaatcacacttaatttatttt-caaaaacattttgtagcgtctgtaatttaaaaatgaaaagtaagccctcc 37236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 13082856 - 13082943
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    ||||||||||||||||  |||||| || | ||| ||  |||| ||||| |||| ||||||||| |||||| |||||||||| ||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaaggtttaatttttatttttaaaatacggacactatgaaatgtttttt 13082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 55428619 - 55428552
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacgga 55428552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 23028168 - 23028086
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat 197  Q
    ||||||||||||||||  |||| |||||||||  || || |    |||||||| |||||||||||||||| ||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatat 23028086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 6803442 - 6803377
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||||| ||| ||||||||||||||| || | ||  ||||| ||||| ||||||||||||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattac 6803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 21773788 - 21773853
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||| ||| |||||||||||||||||| || |  || |||||||| ||| |||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacgga 21773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 24560219 - 24560288
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||  ||||| |||||||||||||||    
T  24560219 ggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacgga 24560288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 30200160 - 30200123
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  30200160 gtccgtaatttaaaaatgaaaactaaaccctcccctcc 30200123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 37102221 - 37102184
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  37102221 gtccgtaatttaaaaatgaaaactaaaccctcccctcc 37102184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 52474088 - 52474125
Alignment:
Q  278 tccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  52474088 tccgtaatttaaaaataaaaagtaaaccctcctctccc 52474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 30200312 - 30200264
Alignment:
Q  136 taggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||| || |  ||||||||||| |||||||||||||||    
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacgga 30200264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 351
Target Start/End: Complemental strand, 42772087 - 42772047
Alignment:
Q  311 ctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  42772087 ctcccctcccttcccctcttaaaccttcaatccaaacacac 42772047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 7e-59; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 115 - 351
Target Start/End: Original strand, 36347543 - 36347782
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||| |  |||||||||||||||||| | ||  ||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  36347543 ggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatattttttaaatagttaaca 36347642  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||       
T  36347643 tattaacatgataaacaattatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaa--- 36347739  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
      ||||||| || ||||||||| ||||||  ||||||||||||||    
T  36347740 --ctctcccttcccttcccctcctaaaccctcaatccaaacacac 36347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 115 - 314
Target Start/End: Complemental strand, 23748337 - 23748130
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||||    
T  23748337 ggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaaca 23748238  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || |||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||    
T  23748237 tattaacatgataaacgataatataatacttcaatcacacttgatttatttttgaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccc 23748138  T
Q  307 tcctctcc 314  Q
    ||| ||||    
T  23748137 tcccctcc 23748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 113 - 349
Target Start/End: Original strand, 8426879 - 8427110
Alignment:
Q  113 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  8426879 atggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgttttttaaaaagttaa 8426978  T
Q  213 catattaacatgat-aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctc 311  Q
    |||  ||| ||||| | |||| || |||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||     |||    
T  8426979 catgataa-atgatcatataatacttcaatcgcacttaatttattttagaaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaa-----ctc 8427072  T
Q  312 tcccctctcttcccctcataaacctccaatccaaacac 349  Q
    ||||||| ||| ||||| ||||||  ||||||||||||    
T  8427073 tcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 315
Target Start/End: Original strand, 15224733 - 15224904
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 243  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||        |||| || |||||||    
T  15224733 gggagtgtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaatgatcatataatacttcaatca 15224832  T
Q  244 cacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||    
T  15224833 cacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccctccc 15224904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 351
Target Start/End: Original strand, 36046206 - 36046442
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  36046206 ggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgttttttaaaaagttaaca 36046305  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    |||||||||| |||        |||| || |||||  |||| ||||||||||| |||| |||||||||| ||||||||||||||||  |||| |||||      
T  36046306 tattaacatgttaaatgatcacataatacttcaat--cactcaatttattttataaaagcatgttatatcgtccgtaatttaaaaaacaaaagtaaac-- 36046401  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        |||||||| ||||||||||||||||  ||||||||||||||    
T  36046402 ----ctcccctcccttcccctcataaaccctcaatccaaacacac 36046442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 39732774 - 39732926
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||||||||||||||||||||||| | | |||||||| |||| |||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  39732774 gtttacttttcatttttaaattacgaacattatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 39732873  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  39732874 atttattttagaaaaacatg-tatatagtccgtaatttaaaaacgaaaagtaaa 39732926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 115 - 314
Target Start/End: Original strand, 19566822 - 19567030
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaac 213  Q
    |||||||||||| |||  |||||| |||| ||| ||  |||  |||||||| ||| ||||||||||| || |||||||||| |||||| ||||||||| |    
T  19566822 ggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaatgtttttttaaaaagttagc 19566921  T
Q  214 atattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||||||| ||||||||        ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||    
T  19566922 atattaaaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaatgaaattaaacc 19567021  T
Q  306 ctcctctcc 314  Q
    |||| ||||    
T  19567022 ctcccctcc 19567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 39821868 - 39821704
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacactta 249  Q
    ||||| ||||| ||||||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||||        || || | |||| ||||||    
T  39821868 gtttagttttcttttttaaattacggacactatgaaataatatttaaagagttaacatattaacatgataaatgatcttataatacttaaatcgcactta 39821769  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||| ||||    
T  39821768 atttattttagaaaaacatgttatagaatccataatttaaaaatgaaaagtaaaccctcccctcc 39821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 16565978 - 16565832
Alignment:
Q  156 atgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacact 247  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||        |||| || |||||||||||    
T  16565978 atgtttactttttatttttaaattacggatactatgaaacgttttttaaaaagttaacatataaatatgataaacgatcatataatacttcaatcacact 16565879  T
Q  248 taatttattttagaaaaacatgt--tatatagtccgtaatttaaaaa 292  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||    
T  16565878 taatttattttagaaaaacatgttatatatagttcgtaatttaaaaa 16565832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 137 - 354
Target Start/End: Original strand, 36566874 - 36567096
Alignment:
Q  137 aggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaa-tattttttaaaaagttaacatattaacatgataa------- 228  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||| | ||||||| | |||| |||||||||||||||||||||||||||           
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaagttttttataaaaagttaacatattaacatgataaatgatca 36566973  T
Q  229 -ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa-taaaccctcctctcccctctcttcccc 326  Q
     |||| || ||||||||| |||||||||| ||||||||||||||||||| | | ||||||||||| |||||| ||||   || |||  ||||| ||||||    
T  36566974 tataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaacgaaaaagtaaa---tcatct--cctctattcccc 36567068  T
Q  327 tcataaacctccaatccaaacacactta 354  Q
    || ||||||  |||||||||||||||||    
T  36567069 tcctaaaccctcaatccaaacacactta 36567096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 115 - 292
Target Start/End: Complemental strand, 40022615 - 40022427
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaac 213  Q
    |||||| |||||||||  ||||| |||| ||||||| ||||  |||||| ||||||||||||||||| || ||||||||||  ||||||||||||| |||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaagtaaac 40022516  T
Q  214 atat--taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||  ||| ||| |||        |||| || ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  40022515 atattataatatgttaaacaatcatataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaaaaa 40022427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 119 - 318
Target Start/End: Complemental strand, 12541999 - 12541796
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  |||||||||  ||||||| ||| |  ||||||||||||    ||||||| |||||||| |||| |||||||||||||||||| |||    
T  12541999 tgtttggatggagggtttaggagaagaaggga-gggtagatttacttttcat----aaattacagatactataaaatgttttttaaaaagttaacacatt 12541905  T
Q  219 aacatgataaa--------taacacctcaatcacacttaatttattttagaaaaac-atgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||        ||  || |||||| ||||||||||||||||||||||  || ||||||||||||||||||||||| ||||| || || ||||    
T  12541904 aacatgataaacgatcatatagtacttcaatcgcacttaatttattttagaaaaaatattttatatagtccgtaatttaaaaaagaaaagtagactctcc 12541805  T
Q  310 tctcccctc 318  Q
     ||||||||    
T  12541804 cctcccctc 12541796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 34209706 - 34209592
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||| |  |||||| | |||| |||| || |  | ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  34209706 ggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatattttttaaaaagttaaca 34209607  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  34209606 tattaacatgataaa 34209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 170 - 304
Target Start/End: Original strand, 28262500 - 28262642
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 261  Q
    ||||||||||| | | ||||||||||||||||||||||||||| ||| ||||||||||||        ||| |  |||||||||  ||||||||||||||    
T  28262500 tttttaaattatgaacactatgaaatattttttaaaaagttaatataataacatgataaacgatcatgtaatatttcaatcacatgtaatttattttaga 28262599  T
Q  262 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||||||||||||||||  ||||||||||| ||||| |||||    
T  28262600 aaaacatgttatatagtcaataatttaaaaaagaaaagtaaac 28262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 318
Target Start/End: Original strand, 31795772 - 31795982
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||||||  ||||| |||| ||||||| ||||    ||||||||| ||||||||||||||| |||||||||  |||||| ||||  ||| ||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  216 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |  |||||||||||        ||| || ||||||||||||||||||||||| ||||||||||||| || ||||| ||||| ||| ||||| ||| ||||    
T  31795872 aacaacatgataaacgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatttactccgtgatttagaaaagaaaattaatccct 31795971  T
Q  308 cctctcccctc 318  Q
    ||  |||||||    
T  31795972 cccttcccctc 31795982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 304
Target Start/End: Complemental strand, 7681443 - 7681293
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac---atattaacatgat-aaataacacctcaatcacacttaattt 253  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||   ||||  | | ||| | |||| || |||||||||||||||||    
T  7681443 gtttactttttatttttaaattgcggatattatgaaatatttttttaaaagttaacatgatatacaaacgatcatataatacttcaatcacacttaattt 7681344  T
Q  254 attttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    |||||| |||||  | ||||||| ||||||||| |||||||||||| ||||    
T  7681343 attttacaaaaaactattatataatccgtaattaaaaaatgaaaaacaaac 7681293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 9631802 - 9631688
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||| ||||||   ||  ||| ||||||| ||||||||||||||| || ||||||| |  |||||||||||||||    
T  9631802 ggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaatgtcctttaaaaagttaaca 9631703  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  9631702 tattaacatgataaa 9631688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 29525768 - 29525931
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaa--aaagttaacatattaacatgataaa----------taacacctca 239  Q
    |||| |||| |||||||| ||||||||||| ||||||||||| | ||||||    |||||||||||||||||||||||||          ||| || |||    
T  29525768 gggagtgttcacttttcaattttaaattactgatactatgaatttttttttttggaaagttaacatattaacatgataaaaagtattatataatacttca 29525867  T
Q  240 atcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||| ||||||||||||| |||||||| ||||||| ||||| ||||||||| ||||||||||    
T  29525868 atcacatttaatttattttaaaaaaacatattatatattccgtgatttaaaaaagaaaaataaa 29525931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 27926752 - 27926681
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||| ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||    
T  27926752 gtttatttttcatttttaaattacggatactattaaattttggttaaaaagttaacatattaacatgataaa 27926681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 35736283 - 35736178
Alignment:
Q  241 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaa 340  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||| |||     || |||||||| ||||||||| ||||||  |||    
T  35736283 tcacacttcatttattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaa-----cccctcccctcccttcccctcctaaaccctcaa 35736189  T
Q  341 tccaaacacac 351  Q
    |||||||||||    
T  35736188 tccaaacacac 35736178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 351
Target Start/End: Complemental strand, 9427179 - 9426988
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaa-aaagttaacatattaacatgataaa--------taacacctcaatcacacttaattta 254  Q
    ||||||||||||||||||||| ||||| |||| ||||||   ||||||| ||||||| |||||||||        ||| || |||||||| | |||||||    
T  9427179 ttttcatttttaaattacggacactataaaatgtttttttttaaagttagcatattagcatgataaacaaacatataatacttcaatcacgcataattta 9427080  T
Q  255 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
     ||| |||||||||||||||||||  |||||||||||| |||||  |||||     ||| |||| ||||||||| ||||| | ||||||||||||||    
T  9427079 gttttgaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaacc-----ctctcctcccttcccctcctaaactttcaatccaaacacac 9426988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 42316809 - 42316880
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||||| |  | |||||||||| ||||||||||||||||| |||||||||||||||    
T  42316809 gtttacttttcatttttaaattgcaaacactatgaaatgttttttaaaaagttaacgtattaacatgataaa 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 17379994 - 17379897
Alignment:
Q  175 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaa 264  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||        |||| ||  |||||||||||||||||||||||||||    
T  17379994 aaattacggacactatgaaatgttttttaaaaagttagcatattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaa 17379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 1583272 - 1583222
Alignment:
Q  162 acttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaatgttttttaaaaagttaa 1583222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 2241570 - 2241471
Alignment:
Q  197 ttttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattta 288  Q
    |||||| |||| |||||||||||||||||||||        ||| || ||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  2241570 tttttttaaaatttaacatattaacatgataaacaatcatataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaattta 2241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 298
Target Start/End: Original strand, 37739949 - 37740085
Alignment:
Q  169 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttag 260  Q
    ||||| |||||||| | |||||||| |  |||| |||||||||| ||||||||||||||||        ||| || ||||||||||||||||||||||||    
T  37739949 attttaaaattacgaacactatgaagt--ttttcaaaaagttaagatattaacatgataaacgatcatataatacttcaatcacacttaatttattttag 37740046  T
Q  261 -aaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
     |||||||||||||||| || | |||||||||| |||||    
T  37740047 aaaaaacatgttatataatctggaatttaaaaaagaaaa 37740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 9591973 - 9592022
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  9591973 acacttaatatattttagaaaaacatgttatatagtgcgtaatttaaaaa 9592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 36347783 - 36347714
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  36347783 ggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacgga 36347714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 35736429 - 35736337
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||||||||||  |||||||||| ||||||| ||||  | | ||||||| |||||||||| |||| |||||||||  |||||||||||    
T  35736429 ggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaaagttttttaaaaa 35736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 887351 - 887261
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaa 206  Q
    ||||||| |||||| || |||||||||||||||||| ||||  | ||||||||| |||||||||||||||| |||| |||| ||||| ||||    
T  887351 ggtgtgtctggatg-aaggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgtttttaaaaa 887261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 41841793 - 41841722
Alignment:
Q  238 caatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||| ||||||||||||||| |||| ||||||||||||  |||||||||||| |||||  |||||||||    
T  41841793 caatcacccttaatttattttaggaaaatatgttatatagttggtaatttaaaaaagaaaatcaaaccctcc 41841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 45257555 - 45257456
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat-attttttaaaaa 207  Q
    ||||| ||||||||||||||||   ||||||| ||||||||| | ||  ||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||    
T  45257555 ttttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaa 45257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 6721754 - 6721820
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||  |||||||| ||||| ||||    
T  6721754 tcaatcacacttgatttattttagaaaaacatgctatatattccgtggtttaaaaaagaaaactaaa 6721820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 9426985 - 9427053
Alignment:
Q  113 atggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||||| |||||||||||||||||||||| | ||  ||||  ||||| ||||||||||||    
T  9426985 atggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 15224936 - 15224868
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 183  Q
    |||||||||||||  |  |||||||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  15224936 ggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgg 15224868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 17380083 - 17380007
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatg 191  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||  ||||||||||||||||||||| ||||||    
T  17380083 ggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 34187577 - 34187644
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| || |||||||||| |||||| | ||||| ||| |||||| ||||||||||||||    
T  34187577 ggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacg 34187644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 41778885 - 41778807
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||||||||||||||||||| |||||||| |||||  |||| |||||||||    |||| |||||||||| |||||    
T  41778885 tcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccc 41778807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 39732978 - 39732901
Alignment:
Q  107 tgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||| ||||||||||||| ||| ||||  |||||||||| | ||||   |||||||||| |||||||||||||||    
T  39732978 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacgga 39732901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 27926669 - 27926613
Alignment:
Q  248 taatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||||||||||||||||||||||||| | |||   ||||||||| |||||||||||    
T  27926669 taatttattttagaaaaacatgttatacaatccagtatttaaaaaagaaaaataaac 27926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 177  Q
    |||||||||| ||  ||||||||||| |||||| ||||  ||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 22356252 - 22356177
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||| ||||||||||||| ||   ||||||||||||||||| ||||  ||| | ||||| |||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 31061361 - 31061428
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||| |||||||||||||| ||||||||  | | ||||||  |||||||||||||    
T  31061361 ggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacg 31061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 35736172 - 35736246
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||  | ||| ||||| ||||||||| |||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacgga 35736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 36046276 - 36046207
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||||||||||||||     ||||||||||  |||||||| ||||||  | ||||||||||||    
T  36046276 gtccgtaatttaaaaatgaaaaataaa-----ctctcccctcatttcccctcctaaaccctccatccaaacacac 36046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 39354231 - 39354378
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttaga 261  Q
    ||||||||||||| | | |||||||||||||| ||||| |||| ||| |||||| ||||         ||| || ||||||||||| | |||||||||||    
T  39354231 tttttaaattacgcacattatgaaatatttttaaaaaaattaaaataataacataataatcgatcatgtaatacttcaatcacactaactttattttaga 39354330  T
Q  262 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
     ||||||||||||||    ||||||||||||  |||| ||||| ||||    
T  39354331 taaacatgttatataacttgtaatttaaaaaaaaaaagtaaactctcc 39354378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 887028 - 886958
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||| |||||||||||| |||| ||| |||||| ||  |||||||||||| ||||| ||| ||||||    
T  887028 tcaatcacacataatttattttaaaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctcc 886958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 2381125 - 2381174
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||    
T  2381125 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaa 2381174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 16713494 - 16713587
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||||||| ||| ||  ||||| |||||||||||| ||||  ||| | |||| |||||||||||||| | | ||| ||||||||||| |||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaag 16713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 32503269 - 32503232
Alignment:
Q  239 aatcacacttaatttattttagaaaaacatgttatata 276  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  32503269 aatcatacttaatttattttagaaaaatatgttatata 32503232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 36046443 - 36046375
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  ||||| |||||||||||| ||| | ||||||||||  |||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaaggga-ggggaggtttacttttgttttttaaattacgga 36046375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 41841678 - 41841750
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||  ||||  ||||| ||||||||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattac 41841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 4e-57; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 115 - 351
Target Start/End: Complemental strand, 54935311 - 54935070
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||| | ||||||||||||| ||    
T  54935311 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatgtattttaaaaagttatca 54935212  T
Q  215 tattaacatgataaa---------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    |||||| ||||||||          || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  54935211 tattaatatgataaacgatcatataaatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaacc 54935112  T
Q  306 ctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||    |||||| ||||||||| ||||||  ||||||||||||||    
T  54935111 ctc----cccctcccttcccctcctaaaccctcaatccaaacacac 54935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 115 - 308
Target Start/End: Complemental strand, 27735987 - 27735786
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| |  |  ||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  215 tattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||||        || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  27735887 tattaacatgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccc 27735788  T
Q  307 tc 308  Q
    ||    
T  27735787 tc 27735786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 115 - 292
Target Start/End: Complemental strand, 45742132 - 45741947
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||| |  ||||||| ||| |||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  45742132 ggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaaca 45742033  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||        |||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45742032 tattaacatgataaacgatcatataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaaa 45741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 132 - 351
Target Start/End: Original strand, 31348340 - 31348562
Alignment:
Q  132 agtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-- 229  Q
    |||||| |||||||||||| || |  ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||      
T  31348340 agtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagctaacatattaacatgataaaca 31348439  T
Q  230 ------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttc 323  Q
          ||| |  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||     |||    
T  31348440 atcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctccc-----ttc 31348534  T
Q  324 ccctcataaacctccaatccaaacacac 351  Q
    ||||| |||||   ||||||||||||||    
T  31348535 ccctcctaaactctcaatccaaacacac 31348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 110 - 352
Target Start/End: Original strand, 5730827 - 5731073
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  ||||||||||| ||| |||||||  |||||  ||||||||||||||||||||  |||| ||||||||||| || |||    
T  5730827 tttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatattttttgaagagt 5730926  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    |||||||||||||||||||        |||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||    
T  5730927 taacatattaacatgataaatgatcatataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaa----aaaagta 5731022  T
Q  302 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 352  Q
    || |   |||||||||| ||||||||| ||||||  |||| ||||||||||    
T  5731023 aaacaaactctcccctcccttcccctcctaaaccctcaattcaaacacact 5731073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 351
Target Start/End: Complemental strand, 37711371 - 37711141
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||||| |||||||              
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatatt---------- 37711282  T
Q  209 ttaacatattaacatgataa-ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
      |||||  ||| ||||| | |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  37711281 --aacatgataa-atgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaaccct 37711185  T
Q  308 cctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    || ||||| || ||||||||| ||||||  ||||||||||||||    
T  37711184 cccctcccttcccttcccctcctaaaccctcaatccaaacacac 37711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 115 - 309
Target Start/End: Complemental strand, 54320676 - 54320474
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||||||  ||||||||||||||| ||    
T  54320676 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaacgttttttaaaaagttagca 54320577  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| ||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||  ||||||    
T  54320576 tattaacatgataaacaatcatataatactccaatcacacttaatttattttagaaaaacatgatatatagtcggtaatttaaaaaagaaaatcaaaccc 54320477  T
Q  307 tcc 309  Q
    |||    
T  54320476 tcc 54320474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 115 - 305
Target Start/End: Original strand, 49735470 - 49735668
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||||||||||||||||||| |  ||||||| | |||||||||||||||     
T  49735470 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtcttttaaaaagttaacc 49735569  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||||||||||||||        |||| |  || ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  49735570 tattaacatgataaacgataatataatatttctatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaacc 49735668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 297
Target Start/End: Complemental strand, 41174587 - 41174397
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||    
T  41174587 ggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggtttttaaaaagttagca 41174488  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||||| ||||        |||| || ||||||||| || |||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  41174487 tattaacataataaatgatcatataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaatttaaaaaagaaa 41174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 35248922 - 35248738
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||  ||||||||| || ||||| ||||  |||||||||||| |||||||||| ||| |||    |||||||||| |||||||||| ||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  221 catgataaataac--------acctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||||||||         || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35248822 catgataaataatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaa 35248738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 176 - 351
Target Start/End: Complemental strand, 26167118 - 26166940
Alignment:
Q  176 aattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaaca 267  Q
    ||||||||| ||| |||||| |||||| || |||||||||||||||||||||||        ||| || ||||||||||||||||||||||||| |||||    
T  26167118 aattacggacactttgaaatgtttttttaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttagagaaaca 26167019  T
Q  268 tgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||| |||||||||||| |||||| |||     ||||||||||  |||||||| ||||||  ||||||||||||||    
T  26167018 tgttatatagtctgtaatttaaaaaagaaaaacaaa-----ctctcccctccattcccctcctaaaccctcaatccaaacacac 26166940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 139 - 351
Target Start/End: Original strand, 1968377 - 1968600
Alignment:
Q  139 gaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatat-tttttaa-------aaagttaacatattaacatgataaa- 229  Q
    ||||| |||||| ||||  |||||||||||| | |||||||| ||| |||||||||||| |||||||       |||||||||||||||||||||||||     
T  1968377 gagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaatatctttttaactttttaaaagttaacatattaacatgataaac 1968476  T
Q  230 -------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctctt 322  Q
           ||| || |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     |||| ||||| |||    
T  1968477 gatcatataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatgaaaattaaa-----ctcttccctccctt 1968571  T
Q  323 cccctcataaacctccaatccaaacacac 351  Q
    |||||| ||||||  ||||||||||||||    
T  1968572 cccctcctaaaccctcaatccaaacacac 1968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 158 - 352
Target Start/End: Original strand, 46007744 - 46007943
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaata--ttttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacact 247  Q
    |||||||||||||||||||||||| || |  ||||||    ||||||||||||||||||||||||||||||||||        || || |||||| ||||    
T  46007744 gtttacttttcatttttaaattaccgacataatgaaaatgtttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatctcact 46007843  T
Q  248 taatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaac 347  Q
    |||||||||||| ||||||| ||||||||||| | |||||||||| ||||| ||||||     |||||||| ||||||||| ||||||  ||||||||||    
T  46007844 taatttattttacaaaaacaagttatatagtctgcaatttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaac 46007938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 297
Target Start/End: Original strand, 24565348 - 24565536
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||| |||||||| ||||||    ||||  ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||     
T  24565348 ggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacggatattacgaaatgctttttaaaaagttaact 24565447  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||| ||||||        |||| || |||||||| || |  ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  24565448 tattaacgtgataaacaaacatataatacttcaatcacgctca--ttattatagaaaaacatgttatatagcccgtaatttaaaaaagaaa 24565536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 304
Target Start/End: Complemental strand, 6891590 - 6891405
Alignment:
Q  127 tggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgat 226  Q
    |||| |||||||||||||||| || ||||  ||||  ||||| ||||||||||| ||| |||||||| | ||||| ||||| |||| ||| |||||| ||    
T  6891590 tggatagtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacattat 6891491  T
Q  227 aaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    |||        ||| || |||||||||||||||||||||||||||||||||||||||| |  ||| |||||||| |||||||||||    
T  6891490 aaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaagaaaaataaac 6891405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 36151773 - 36151637
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 250  Q
    |||||||||||||||||||||| | | ||||  ||||  ||||||||| ||||||||||||||||||||||        ||| || ||||||||||||||    
T  36151773 tttacttttcatttttaaattatgaacactagaaaatgatttttaaaa-gttaacatattaacatgataaacgatcatataatacttcaatcacacttaa 36151675  T
Q  251 tttattttagaaaaacatgttatatagtccgtaattta 288  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36151674 tttattttagaaaaacatgttatatagtctgtaattta 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 158 - 315
Target Start/End: Original strand, 47433754 - 47433919
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaa 250  Q
    ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| ||||||      ||| | |||| || ||||||||||||||    
T  47433754 gtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacatataaacgatcatataatacttcaatcacacttaa 47433853  T
Q  251 tttattttagaaaaacatgtta-tatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||    
T  47433854 tttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctccc 47433919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 6938489 - 6938394
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtt 210  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  6938489 ggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttttaaaaagtt 6938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 16400987 - 16400871
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 261  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||        |||| || ||||||| | |||||||||||||||    
T  16400987 tttttaaattagggacactatgaaatagtttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcataattaatttattttaga 16400888  T
Q  262 aaaacatgttatatagt 278  Q
    |||||||||| ||||||    
T  16400887 aaaacatgttgtatagt 16400871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 315
Target Start/End: Original strand, 17938115 - 17938318
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||  |||||||||||||| ||| || |  ||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||| |||| ||| |||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  221 catgataa--------ataacacctcaatcacacttaatttattt-tagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctc 311  Q
    ||||||||        |||| || |||||||||||||||||||||  | ||||| ||||||||||||  |||||||||||| ||||| ||||| ||| ||    
T  17938215 catgataaacgatcatataatacttcaatcacacttaatttatttaaaaaaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatc 17938314  T
Q  312 tccc 315  Q
    ||||    
T  17938315 tccc 17938318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 351
Target Start/End: Complemental strand, 29798478 - 29798291
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt-aacatgataa--------ataacacctcaatcacacttaattta 254  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| || ||||| ||||        |||| || |||||||||||| |||||    
T  29798478 ttttcatttttaaattacggacactatgaaatgttttttaaaaaattaacatgttaaacataataaacgatcatataatacttcaatcacacttgattta 29798379  T
Q  255 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        ||||||||||||||||||||| ||||||||||||  |||| ||||     || ||| ||||||||||||| ||||||  ||||||||||||||    
T  29798378 ----agaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaa-----ctatcctctctcttcccctcctaaaccatcaatccaaacacac 29798291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 34111003 - 34110933
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  34111003 gtttactttttatttttaaattacg-atactgtgaaatgttttttaaaaagttaacatattaacatgataaa 34110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 44784190 - 44784038
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 249  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| ||||  |||||||||||||| | |||||        ||| || |||||||||||||    
T  44784190 gtttacttttcgtttttaaattacgaacactacgaaatattttctaaac-gttaacatattaaccttataaacgatcatataatacttcaatcacactta 44784092  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    ||||| ||||||||||| |||||||| ||  |||||||||||| ||||| ||||    
T  44784091 atttactttagaaaaacctgttatatggtatgtaatttaaaaaagaaaagtaaa 44784038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 351
Target Start/End: Original strand, 21694910 - 21695129
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa---- 228  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| ||||| ||||  ||||||| || || | |||  || |||||||        
T  21694910 gtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgataatgat 21695009  T
Q  229 ---ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttccc 325  Q
       |||| || |||||||||||||||||| || | ||||| |  |||||| |||| ||||||||||  ||||| |||||||||| || |     ||||||    
T  21695010 catataatacttcaatcacacttaattta-ttaaaaaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttc-----cttccc 21695103  T
Q  326 ctcataaacctccaatccaaacacac 351  Q
    |||||||||| |||||||||||||||    
T  21695104 ctcataaacccccaatccaaacacac 21695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 279
Target Start/End: Complemental strand, 22659413 - 22659268
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcattttt-aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 232  Q
    |||||||||  |||||| | || |||||||||||||||||| ||||||| || || || ||||||||||| |||| |||| |||||||||| ||||| ||    
T  22659413 tttaggaggaaaagggaggagagtgtttacttttcattttttaaattacagacaccataaaatatttttttaaaaattaatatattaacataataaacaa 22659314  T
Q  233 -cacctcaatcacacttaatttattttagaaaaacatgttatatagtc 279  Q
     ||  | |||  |||||||||| |||||| ||||||||||||||||||    
T  22659313 tcatattaat--cacttaatttcttttaggaaaacatgttatatagtc 22659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 351
Target Start/End: Original strand, 2247854 - 2248042
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 255  Q
    ||||||||||||||||||||| | ||| |||| ||| ||||||  ||||| |||||| ||||||||        ||| || |||||||||| || ||| |    
T  2247854 ttttcatttttaaattacggacattataaaatgtttattaaaatcttaacttattaatatgataaacaattatataatacttcaatcacacatatttt-t 2247952  T
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||||||||||||||| || |||||||||||| ||||| ||||     ||||||| || |||| |||| ||||||  ||||||||||||||    
T  2247953 tttagaaaaacatgttatata-tctgtaatttaaaaaagaaaagtaaa-----ctctcccttcacttctcctcctaaaccctcaatccaaacacac 2248042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 31348563 - 31348494
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  31348563 ggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 31348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 305
Target Start/End: Original strand, 45132517 - 45132695
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcat-----ttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgata 227  Q
    ||||||||| ||||| || ||||  |||||||||||||     |||||||||| | | |||| ||||| |||| ||||||||||||||||||| ||||||    
T  45132517 gtttaggagcggaagagaggggatggtttacttttcataatctttttaaattatgtacactacgaaatgtttt-taaaaagttaacatattaaaatgata 45132615  T
Q  228 a--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    |        |||| || ||||||||||||||||||||||      |||| ||||||||||||||||||||||| ||||| ||||||    
T  45132616 aacgatcatataatacttcaatcacacttaatttatttt------acatattatatagtccgtaatttaaaaaagaaaagtaaacc 45132695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 28333003 - 28332850
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 249  Q
    ||||||||||  ||||||||||||  | |||| |||||||||| |||||  ||| ||||||||| || ||||        ||| || ||||||| |||||    
T  28333003 gtttactttttgtttttaaattaccaacactacgaaatattttctaaaacattagcatattaacctggtaaacgatcatataatacttcaatcatactta 28332904  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    ||||| ||||||||||| |||||||||||  |||||||||||| ||||| ||||    
T  28332903 atttactttagaaaaacctgttatatagtatgtaatttaaaaaagaaaagtaaa 28332850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 56135855 - 56135752
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 342  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||  |||||| ||||     |||||||| ||||||||| ||||||  |||||    
T  56135855 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaacc-----ctcccctcccttcccctcctaaaccctcaatc 56135761  T
Q  343 caaacacac 351  Q
    |||||||||    
T  56135760 caaacacac 56135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 2917095 - 2917150
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||| | |||||||||||||||| |||||||||||||||| ||||||||||    
T  2917095 tcaatcacaataaatttattttagaaaatcatgttatatagtccggaatttaaaaa 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 36278450 - 36278376
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 232  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||| ||| ||||| |||||| |||||||||||    
T  36278450 gtttagttttcgtttttaaattacagacactacgaaatattttttataaatttaacgtattaatatgataaataa 36278376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 1968601 - 1968532
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| || |  ||||| |||||||||||||||||||||    
T  1968601 ggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacgga 1968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 27735749 - 27735816
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||| ||  |||||||||||||||||| | ||  ||||| |||||||||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt 179  Q
    |||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 2248050 - 2247972
Alignment:
Q  108 gttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggata 186  Q
    |||| ||||||||||||||| ||  |||||||||| |||| || ||||  ||||||||||| |||||||||||| ||||    
T  2248050 gtttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacagata 2247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 54935241 - 54935310
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||||||||||||||||||||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  54935241 gtccgtaatttaaaaatgaaaaataaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 54935310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 317
Target Start/End: Complemental strand, 55510407 - 55510202
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    ||||||||||||| |||||| ||||| |||  ||| ||  |||||||||| |||||||||||||| | ||||| |||||||||  ||||| | || |||     
T  55510407 gtgtttggatggagagtttaagagggaaagaaatgtgagggtttactttt-atttttaaattacgaacactataaaatattttaaaaaaattgaa-ataa 55510310  T
Q  218 taacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
     |||||||| |||        || || ||| ||||||||||||||||||| |||||||| ||| || |||  ||| ||||||||||||| |||  |||||    
T  55510309 caacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtctttaaattaaaaatgaaaagtaagtcctcc 55510210  T
Q  310 tctcccct 317  Q
     |||||||    
T  55510209 cctcccct 55510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 45132737 - 45132668
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||| || || |||||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  45132737 ggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacgga 45132668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 45911327 - 45911368
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  45911327 ttacttttcttttttaaattacggatactataaaatattttt 45911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 54576329 - 54576398
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  | ||||||||| |||||| ||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacgga 54576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 54935069 - 54935137
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||  ||||||||||||||||||  ||||  ||||||||||| |||||||||||||    
T  54935069 ggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacg 54935137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 31719966 - 31720028
Alignment:
Q  238 caatcacacttaatttattttagaaaa--acatgttatatagtccgtaatttaaaaatgaaaa 298  Q
    |||||||||||||||||||| | ||||  ||||||||||||||  |||||||||||| |||||    
T  31719966 caatcacacttaatttatttaaaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaa 31720028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 2247889 - 2247843
Alignment:
Q  263 aaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||| |||||  |||||||||||||||||||||||| ||||||||    
T  2247889 aaacattttataatgtccgtaatttaaaaatgaaaaatgaaccctcc 2247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 6938360 - 6938322
Alignment:
Q  270 ttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  6938360 ttatatagtccgtaatttaaaaaggaaaaataaatcctc 6938322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 27735901 - 27735947
Alignment:
Q  261 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |||||||| |||||  |||||||||||||||||||||||| ||||||    
T  27735901 aaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccct 27735947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 47433951 - 47433885
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||| | ||  ||||||||||||||||||  |||  ||||||||||| ||||||||||||    
T  47433951 ggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattac 47433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 47846303 - 47846233
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||||||| ||  ||||| |||| ||||||||||||  ||||||||||  |||||||||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 49735540 - 49735471
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||||||||| | ||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  49735540 gtccgtaatttaaaaatgaaaagtgaacc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 49735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 22921094 - 22921033
Alignment:
Q  237 tcaatcacactta-atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||  |||||||||||| ||||    
T  22921094 tcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaa 22921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 22970705 - 22970766
Alignment:
Q  237 tcaatcacactta-atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||  |||||||||||| ||||    
T  22970705 tcaatcacactttgatttattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaa 22970766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 34995157 - 34995108
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    |||||||||||||||||||||||||| | | || || |||||||||||||    
T  34995157 acacttaatttattttagaaaaacatttcacattgttcgtaatttaaaaa 34995108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 37761467 - 37761555
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta 203  Q
    ||||||||||||| || ||||||||||| ||| ||| || |  ||| |||||| |||||||||||||| | |  || ||||||||||||    
T  37761467 ggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatatttttta 37761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 117 - 314
Target Start/End: Complemental strand, 8530039 - 8529834
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 216  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatattttttaaaaagttaacata 8529940  T
Q  217 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    |||||||| |||        |||| || ||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| ||||| |||||||||    
T  8529939 ttaacatggtaaacgatcatataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaagtaaaccctc 8529840  T
Q  309 ctctcc 314  Q
    | ||||    
T  8529839 ccctcc 8529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 115 - 307
Target Start/End: Original strand, 40094935 - 40095136
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  40094935 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaaca 40095034  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
     |||||||||||||        |||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||    
T  40095035 aattaacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaaacc 40095134  T
Q  306 ct 307  Q
    ||    
T  40095135 ct 40095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 115 - 351
Target Start/End: Complemental strand, 30010574 - 30010335
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||| ||||||||||| ||||  |||||||||||||||| |||||||||| |||| ||||| ||||||||| ||||||||    
T  30010574 ggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaaca 30010475  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||| ||||        |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |     
T  30010474 tattaacattataaacgatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatc- 30010376  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  30010375 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 30010335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 110 - 351
Target Start/End: Complemental strand, 12234257 - 12234013
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||    
T  12234257 tttatggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaatgttttttataaagt 12234158  T
Q  210 taacatattaacatgat--------aaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    || ||||||||||| ||        | || | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  12234157 tagcatattaacataatatatgatcatattatacatcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaatta 12234058  T
Q  302 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    | ||     || ||||| ||||||||| ||||||  ||||||||||||||    
T  12234057 agcc-----ctaccctcccttcccctcctaaaccctcaatccaaacacac 12234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 110 - 352
Target Start/End: Original strand, 38509891 - 38510136
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||| ||  ||||||||||||||||||  |||  ||| ||||||||||||||||||||||| |||||||||| | ||||||||| |    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtcttttaaaaaat 38509990  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    |||||| |||||| |||||        |||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||    
T  38509991 taacatcttaacacgataaacgataatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaacta 38510090  T
Q  302 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacact 352  Q
    ||||     |||||||| ||||||||| ||||||   ||||||||||||||    
T  38510091 aacc-----ctcccctcccttcccctcctaaacccttaatccaaacacact 38510136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 110 - 351
Target Start/End: Complemental strand, 41498652 - 41498407
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaaag 41498553  T
Q  209 ttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaat 300  Q
    ||||||||||||||||||||        |||| || |||||||||||||| ||||  ||||||| ||||||| ||||| | ||||||||||| ||||| |    
T  41498552 ttaacatattaacatgataaacgatcatataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaacgaaaagt 41498453  T
Q  301 aaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  41498452 aaacc-----ctcccctcacttcccctcctaaaccctcaatccaaacacac 41498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 115 - 347
Target Start/End: Original strand, 2858934 - 2859169
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||  ||||||||| || |||||||||||||||    
T  2858934 ggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaatgttatttaaaaagttaaca 2859033  T
Q  215 tattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    || | |||| |||||        ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||     
T  2859034 tacttacattataaacaatcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaacc- 2859132  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaac 347  Q
        |||||||| ||||||||| ||||||| ||||||||||    
T  2859133 ----ctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 351
Target Start/End: Original strand, 32951366 - 32951559
Alignment:
Q  161 tacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatt 252  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||        ||| || ||||||||||||||||    
T  32951366 tacttttcatttttaaattacggacacaatgaaatgttttataaaaagttaacatattaacatgataaacgatcgtataatacttcaatcacacttaatt 32951465  T
Q  253 tattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||     ||||||||| ||||| ||| |||||   ||||||||||||||    
T  32951466 tattttagaaaaacatgttctatagtccgtaatttaaaaacgaaaagtaaac-----tctcccctcccttcctctcctaaactctcaatccaaacacac 32951559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 115 - 351
Target Start/End: Original strand, 35349468 - 35349703
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||||| |||  ||||  ||||||||||||||||||||||||||| |||  ||||| |||| |||||||||||||    
T  35349468 ggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacact--gaaatgttttataaaaagttaaca 35349563  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || ||||| || |||| ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||     
T  35349564 tattaacatgataaacaatcatataatacttcaataacccttagtttattttagaaaaaaatgttatatagtccgtaatttaaaaacgaaaagtaaacc- 35349662  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        |||||||| ||||||||||||||||   |||||||||||||    
T  35349663 ----ctcccctcccttcccctcataaacccttaatccaaacacac 35349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 165 - 314
Target Start/End: Original strand, 50744332 - 50744490
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaa-agttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 255  Q
    |||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||||||||||||        ||| || |||||||||||||||||||    
T  50744332 tttcatttttaaattacggacactatgaaatgtttttttaaagagttaacatattaacatgataaacgatcatataatacttcaatcacacttaatttat 50744431  T
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  50744432 tttagagaaacctgttatatagtccgtaatttaaaaaagaaaaacaaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 159 - 350
Target Start/End: Complemental strand, 51597866 - 51597672
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaa 250  Q
    ||||||||||| |||||||||| | | ||||||||||  ||||||||||||||||||||||| ||||||||        ||| || ||||||||||||||    
T  51597866 tttacttttcaattttaaattatgaacactatgaaatggtttttaaaaagttaacatattaagatgataaacaatcatataatacttcaatcacacttaa 51597767  T
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacaca 350  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||     |||||||||| |||||  |||||||||  |||||||||||||    
T  51597766 tttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaa-----ctctcccctcccttcctttcataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 10392072 - 10391912
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaacatattaacatgataaa--------taacacctcaatcacactt 248  Q
    ||||||||||| ||||||||||||  | | ||| |||| |||||| |||||||||||||||||||||||||||        ||| || | ||||||| ||    
T  10392072 gtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaaagttaacatattaacatgataaacggtcatataatactttaatcacaatt 10391973  T
Q  249 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10391972 aatttattttagaaaaacatgtaatatagtccgtaatttaaaaatgaaaagtaaaccctcc 10391912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 158 - 308
Target Start/End: Original strand, 49946633 - 49946791
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||        |||| || ||||||||| |||    
T  49946633 gtttatttgtcatttttaaattacggacactataaaatatttttttaaaagttaacatattaacatgataaattatcatataatacttcaatcacattta 49946732  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    |||||||||| |||||||||||||||||||  |  |||||| | ||||| |||||||||    
T  49946733 atttattttaaaaaaacatgttatatagtctctggtttaaacaagaaaagtaaaccctc 49946791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 6563775 - 6563614
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-------taacacctcaatcacacttaa 250  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||       ||| |  ||||| |||| |||    
T  6563775 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 6563676  T
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 313  Q
    ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  6563675 tttattttagaaagacatgttatatagtctgtcatttaaaaaag-aaaataaaccctcctctc 6563614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 304
Target Start/End: Original strand, 45585739 - 45585884
Alignment:
Q  167 tcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatttt 258  Q
    ||||||||||||||  |||||||| |||| |||||| ||||||||||||||||||||||||||        ||  || || |||||||||||||||||||    
T  45585739 tcatttttaaattatagatactataaaatgtttttttaaaagttaacatattaacatgataaacgatcatatagtacttcgatcacacttaatttatttt 45585838  T
Q  259 agaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    | ||||||||||||||||||||||||||| || | ||||| |||||    
T  45585839 aaaaaaacatgttatatagtccgtaattttaagaggaaaagtaaac 45585884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 43551993 - 43552108
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| ||  ||||| |||||||||||||||||||     |||||||| |||||||||||||    
T  43551993 tttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacgt----tatgaaatgttttttaaaaagt 43552088  T
Q  210 taacatattaacatgataaa 229  Q
    ||||||||||||||||||||    
T  43552089 taacatattaacatgataaa 43552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 26324112 - 26324017
Alignment:
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||||||||||  |||||||||||| |||||  ||||||||| |||||||| ||||||||| ||||||  ||||||||||||||    
T  26324112 tttagaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccctcccctcccttcccctcctaaaccctcaatccaaacacac 26324017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 20576136 - 20576247
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||| ||  |||||||||||||||||| ||||  |||||  |||||||||||||||||||| ||  |||||| ||||||||| |||||| ||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacac--tgaaatgttttttaaagagttaatat 20576233  T
Q  216 attaacatgataaa 229  Q
    ||||||||||||||    
T  20576234 attaacatgataaa 20576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 7444736 - 7444623
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| | ||||||| | |||||| || ||||  ||||| |||||||||| |||||||||| ||||| ||||  ||||||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgatttttaaaaagttaacat 7444637  T
Q  216 attaacatgataaa 229  Q
    |||||||| |||||    
T  7444636 attaacataataaa 7444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26940874 - 26941036
Alignment:
Q  144 gaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacac 235  Q
    |||| |||||||  ||| |||||| ||||||||||||  || |||||||||||||| || |||||||||| |||||||||  ||||        ||| ||    
T  26940874 gaagagatgggagggttcactttttatttttaaattatagacactatgaaatatttgtttaaaagttaacttattaacatcgtaaacagtcatataatac 26940973  T
Q  236 ctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
     |||||||||||| ||||||||||||||||||||||||| | |||||| |||||||| |||||    
T  26940974 ttcaatcacacttgatttattttagaaaaacatgttatagaatccgtattttaaaaaagaaaa 26941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 36285619 - 36285741
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||| || |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||        |||| || ||||||||||||     
T  36285619 gtttatttatcatttttaaattacgaacactataaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcacacttg 36285718  T
Q  250 atttattttagaaaaacatgtta 272  Q
    || ||||||| ||||||||||||    
T  36285719 atatattttaaaaaaacatgtta 36285741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 28770969 - 28770852
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||| ||||||||||||||||| ||||||||||| || |||  |||  ||||| |||| |||||||||||||  | | |||||||| |||| ||||||     
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac--acattatgaaatgttttataaaaaa 28770872  T
Q  209 ttaacatattaacatgataa 228  Q
    ||||||||||||||||||||    
T  28770871 ttaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 32951566 - 32951491
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||| ||||||||||||| || |||||||||| |||||||| ||||  ||||||||||| |||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacgga 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 40964798 - 40964726
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||||||||| |||||||    
T  40964798 gtttacttttcatttttaaattacggacaccgtcaaatattttttttaaaagttaacatattaacgtgataaa 40964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 44211037 - 44211097
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||| ||||    
T  44211037 tcaatcacacttaatttattttagaaaaacacgttatatagactgtaatttataaaagaaa 44211097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 2470867 - 2470944
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    ||||||||| ||| | ||||||||||||||||||||||||||   ||||||||||| ||||| |||||| ||| ||||    
T  2470867 tcaatcacaattagtgtattttagaaaaacatgttatatagttgataatttaaaaaagaaaagtaaaccttcccctcc 2470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 41676480 - 41676363
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaa--aagttaacatattaacatgataa--------ataacacctcaatcacact 247  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||     || ||||||||||||||||||||        |||| ||  ||||||||||    
T  41676480 gtttacttttcatttttaaattacggacactataaaatgtttttttttttaaattaacatattaacatgataaacgatcatataatactacaatcacact 41676381  T
Q  248 taatttattttagaaaaa 265  Q
    ||||||||||||||||||    
T  41676380 taatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 43553068 - 43553129
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgt-aatttaaaaatgaaaaataaa 303  Q
    ||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||| ||||    
T  43553068 acacttaatttattttagagaaacaagttatataatccgtaaatttaaaaatgaaaagtaaa 43553129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 2859169 - 2859105
Alignment:
Q  120 gtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||| ||| |||||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacgga 2859105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 23536777 - 23536844
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 177  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| |||||| |||||  |||||||    
T  23536777 tttatggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 35349709 - 35349635
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||| |||||||||||||  |  ||||| |||||||||||| ||||  ||||||||||| |||||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacgga 35349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 30010334 - 30010403
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| | |||||||||||||    
T  30010334 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacgga 30010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 41498406 - 41498471
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||    
T  41498406 ggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 2470727 - 2470819
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    |||| ||||||||||||||||  ||||||||||||||| ||  |||  ||||  ||| ||||||||||||||| | ||||| |||| ||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgtttttt 2470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 2506781 - 2506689
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    |||||||||||||||| ||||||| || |||||||| | ||    ||| ||||| |||||||||||| |||| ||| ||||| ||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaa 2506689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 41676437 - 41676485
Alignment:
Q  261 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  41676437 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 41676485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    ||||||||||||||  |||||||||||||||||| ||||  | ||||||||  |||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 10391893 - 10391943
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||||  || ||||  |||||||||||||||||||||||||||    
T  10391893 tttaggaggggaaacgaggggagggtttacttttcatttttaaattacgga 10391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 12233999 - 12234081
Alignment:
Q  102 atggttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||| ||| | ||||||||||||| ||  |||||||||||||||||| || |  | ||| ||||| |||||||||||||||    
T  12233999 atggttttttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacgga 12234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 12234182 - 12234251
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||||||||| |||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  12234182 gtccgtaatttaaaaatgaaaactaaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 12234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 38509966 - 38509928
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  38509966 gtccgtaatttaaaaatgaaaagtgaaccctcctctccc 38509928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 1085628 - 1085677
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||||| |||||||| ||| || || |||||||||||||    
T  1085628 acacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaa 1085677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 20607459 - 20607410
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttact 164  Q
    ||||||||||||||||  |||||||||||||||||| ||||  |||||||    
T  20607459 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 25268510 - 25268437
Alignment:
Q  111 ttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||| | ||||||||||  |||||| |||||||| || ||||  ||||||||| | |||||||||||||||    
T  25268510 ttatggtatatttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacgga 25268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 40709294 - 40709391
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaa 212  Q
    |||||||||||||  || ||||| ||||||||||||  |||    ||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| ||||    
T  40709294 ggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaa 40709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 49946682 - 49946629
Alignment:
Q  255 ttttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    ||||| ||||| || |||||  ||||||||||||||||||| ||||||||||||    
T  49946682 ttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 7444481 - 7444549
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||| |||| ||  |||| ||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 35349536 - 35349504
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||||||||||||| ||||||||||    
T  35349536 gtccgtaatttaaaaatgaaaagtaaaccctcc 35349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 38510135 - 38510067
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||  |  |||||||||||||||||| ||||  ||||| ||||| |||||||| ||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacgga 38510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 40095005 - 40094973
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||||||||||||| ||||||||||    
T  40095005 gtccgtaatttaaaaatgaaaagtaaaccctcc 40094973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 308
Target Start/End: Complemental strand, 43552065 - 43552037
Alignment:
Q  280 cgtaatttaaaaatgaaaaataaaccctc 308  Q
    |||||||||||||||||||||||||||||    
T  43552065 cgtaatttaaaaatgaaaaataaaccctc 43552037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 49832659 - 49832583
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 313  Q
    ||||||||||||| ||||||||  |||||||  ||||||  || |||||||||||| ||||| ||| | ||||||||    
T  49832659 tcaatcacacttattttatttttaaaaaacactttatattatctgtaatttaaaaaagaaaagtaagctctcctctc 49832583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 351
Target Start/End: Complemental strand, 13634953 - 13634714
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  | ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  13634953 ggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgttttttaaaaagttaaca 13634854  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| |  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||     
T  13634853 tattaacatgataaacgatcatataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaacc- 13634755  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  13634754 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 13634714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 110 - 324
Target Start/End: Complemental strand, 7544383 - 7544161
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  |||||||||||||||| | ||||  ||||  ||||||||||||||||||||| |||||||||| |||||||||||||    
T  7544383 tttaaggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgttttttaaaaagt 7544284  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    || ||||||||||| ||||        |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  7544283 tagcatattaacataataaacaatcatataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaattt 7544184  T
Q  302 aaccctcctctcccctctcttcc 324  Q
    | |||||| ||||| || |||||    
T  7544183 agccctcccctcccttcccttcc 7544161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 110 - 315
Target Start/End: Complemental strand, 10650661 - 10650463
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||| |||||||| ||||||||||||| | ||| ||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaatgttttataaaaagt 10650562  T
Q  210 taacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||| ||||||       || |||||||||||||||||||||||||||||||| | |||  ||||||||||||||||| |||| |||| |||||    
T  10650561 taacatattaccatgat-------acttcaatcacacttaatttattttagaaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcc 10650469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 115 - 320
Target Start/End: Complemental strand, 26415136 - 26414922
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggagggg-aagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaac 213  Q
    ||||||||||||||||  ||||| |||||| || ||| ||||  ||||||||||||||||||| |||| || |||||||||| |||| ||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaatgttttataaaaagttaac 26415037  T
Q  214 atattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||||||||||||||||        ||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  26415036 atattaacatgataaacgaccatataatacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaacgaaaagtaaacc 26414937  T
Q  306 ctcctctcccctctc 320  Q
    |||| ||||| ||||    
T  26414936 ctcccctcccttctc 26414922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 115 - 351
Target Start/End: Complemental strand, 16938721 - 16938482
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||| |||| ||| ||||  |||||  ||||||||||||||||| || |||||||||| ||||||||| ||||||||    
T  16938721 ggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgttttttaaagagttaaca 16938622  T
Q  215 tattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    | ||||||||||||||        || |  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||     
T  16938621 tgttaacatgataaatgatcatataatatttcaatcacacttaatttattttagagaaacatgttatatagtccgtaacttaaaaaagaaaaacaaacc- 16938523  T
Q  307 tcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
        |||||||| ||||||||| ||||||  ||||||||||||||    
T  16938522 ----ctcccctcccttcccctcctaaaccctcaatccaaacacac 16938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 115 - 287
Target Start/End: Original strand, 8502837 - 8503017
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| || ||||| ||||||||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8502837 ggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatattttttaaaaagttaaca 8502936  T
Q  215 tattaacatga--------taaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 287  Q
     ||||| ||||        || |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8502937 aattaatatgatacacaattacataatacttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 118 - 314
Target Start/End: Complemental strand, 36363271 - 36363067
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    |||||||||||||  |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtcttttagaaagttaacatat 36363172  T
Q  218 taacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    || ||||||||        |||| || ||||| |||||| ||||||||||||||||||||||||||||| |||| |||||| | ||||| ||||| ||||    
T  36363171 tagcatgataaacaatgatataaaacttcaatgacacttgatttattttagaaaaacatgttatatagtacgtagtttaaacaagaaaattaaactctcc 36363072  T
Q  310 tctcc 314  Q
     ||||    
T  36363071 cctcc 36363067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 308
Target Start/End: Original strand, 28279478 - 28279680
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||| ||| ||||| ||  | |||  |||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||    
T  28279478 ggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagttaaca 28279577  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||||||||||||||        |||| || ||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  28279578 tattaacatgataaatgatcatataatacttcaatcacacttagtttattttagaaaaaacatgttatatattccataatttaaaaaggaaaagtaaacc 28279677  T
Q  306 ctc 308  Q
    |||    
T  28279678 ctc 28279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 165 - 314
Target Start/End: Complemental strand, 9857072 - 9856915
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatt 256  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||        ||| || |||||||||||| |||||||    
T  9857072 tttcatttttaagttacggacactatgaaatgttttttaaaaagttaacatattaacataataaacgatcatataatacttcaatcacacttgatttatt 9856973  T
Q  257 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||| |||| ||||    
T  9856972 ttagaaaaacatgttatatagtccttaatttaaaaaagaaaactaaactctcccctcc 9856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 315
Target Start/End: Complemental strand, 37607136 - 37606929
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37607136 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacagatactatgaaatgttttataaaaagttaaca 37607037  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || |||||||||  |||||||||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| |    
T  37607036 tattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-ttatatagtccttaatttaaaaacgaaaagtaaactc 37606938  T
Q  307 tcctctccc 315  Q
    || ||||||    
T  37606937 tcatctccc 37606929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 4373611 - 4373770
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||        |||| |  |||||||||||||    
T  4373611 gtttacttttaatttttaaattacggacactgtgaaatatttttttaaaagttaacatattaacatgataaatgatcatataatatttcaatcacactta 4373710  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||  |||||| ||||||||||||||||||||||||| ||||| |||| |||||    
T  4373711 atttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctcc 4373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 110 - 308
Target Start/End: Complemental strand, 10476275 - 10476067
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| | ||||||||||||||   |||||||||||||| | |||||      
T  10476275 tttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatatttataaaaaaaa 10476176  T
Q  210 taacatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgt-tatatagtccgtaa-tttaaaaatgaaaaa 299  Q
     |||||||||| |||||||        |||| || |||||||||||||||||||||||||||||||||| |||||| || |||| |||||||| |||||     
T  10476175 aaacatattaagatgataaacgattatataatacttcaatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaag 10476076  T
Q  300 taaaccctc 308  Q
    |||||||||    
T  10476075 taaaccctc 10476067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 303
Target Start/End: Original strand, 9798615 - 9798810
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||||||   |||||||||  |||||||| ||  |||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaatgttttttaaaaagtcaatat 9798714  T
Q  216 attaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
     ||||||||| ||        |||| || ||||||||| ||||||||||| |||||||||||||||||| || ||||||| |||| ||||| ||||    
T  9798715 tttaacatgaaaaacgatcatataatacttcaatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaaaagaaaagtaaa 9798810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 349
Target Start/End: Original strand, 36392195 - 36392388
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||        |||| || |||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacatattaacatgataaacgatcatataatacttcaatcacactta 36392294  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 349  Q
    || |||||||| |||| || ||||||||||||||||||||||| |||| |||||     | | || ||||||||||||| ||||||  ||||||||||||    
T  36392295 atctattttag-aaaatatattatatagtccgtaatttaaaaacgaaatataaa-----cacaccgctctcttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 10072692 - 10072845
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||||||||||| ||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||        |||| || ||||||| |||||    
T  10072692 gtttacttttcatatttaaattgtgagtactatgaaatattttttaaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 10072791  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||||||||||||||||||||||  ||| |||||||||||| ||||| ||||    
T  10072792 atttattttagaaaaacatgttataccgtcggtaatttaaaaaagaaaagtaaa 10072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 115 - 315
Target Start/End: Complemental strand, 37779345 - 37779139
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||   ||  |||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  37779345 ggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacagatactatgaaatgttttataaaaagttaaca 37779246  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || |||||||||  |||||||||||| |||||||| ||| ||||||| ||||||||||| ||||| ||||| |    
T  37779245 tattaacatgataaacgatcatataatacttcaatcacatataatttattttaaaaaaacat-tta-atagtccttaatttaaaaacgaaaagtaaactc 37779148  T
Q  307 tcctctccc 315  Q
    || ||||||    
T  37779147 tcatctccc 37779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 115 - 215
Target Start/End: Complemental strand, 1658055 - 1657955
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaagttaaca 1657956  T
Q  215 t 215  Q
    |    
T  1657955 t 1657955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 14245090 - 14245204
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||||| ||||   |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  14245090 ggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaagttaaca 14245189  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  14245190 tattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 304
Target Start/End: Complemental strand, 37551647 - 37551453
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37551647 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37551550  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||||||||||||        |||| || |||||||||| |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  37551549 tattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaacgaaaagtaaac 37551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 304
Target Start/End: Complemental strand, 37654477 - 37654283
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| ||||| ||||||  |||  |||||||||||||||||||| ||| || |||  ||||| |||| |||||||||||||    
T  37654477 ggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagacact--gaaatgttttataaaaagttaaca 37654380  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||||||||||||        |||| || |||||||||| |||||||||||  |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  37654379 tattaacatgataaacgatcatataatacttcaatcacacataatttatttttaaaaaac-ttttatatagtccataatttaaaaacgaaaagtaaac 37654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 20146917 - 20147088
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatc----------aca 245  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||        |||| |  ||||||          |||    
T  20146917 ttttcatttttaaattacggtcactatgaaatgttttttaaaaagttaacatattaacatgataagcgatcatataatatttcaatcacacttaattaca 20147016  T
Q  246 cttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 318  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||    
T  20147017 cttaatttattttagaaaaacatg-tatataatccgtaatttaaaaatgaaaagtaaaccctcccttcccctc 20147088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 351
Target Start/End: Original strand, 16501836 - 16502033
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    |||| ||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||| ||||        |||| || | |||||||||| |    
T  16501836 tttagttttcatttttaaattacggacattatgaaatgtttttttaaaagttaacatattaacataataaatgatcatataaaactttaatcacacttga 16501935  T
Q  251 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 349  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||  |||| |||   |||    |||||||||| ||||| ||||||  ||||||||||||    
T  16501936 tttattttagaaaaaatatgatatatagtccgtaatttaaaaaataaaagtaatttctc----cccctctctttccctcctaaaccctcaatccaaacac 16502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 350
Target Start/End: Original strand, 2550397 - 2550592
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa-agttaacatattaacatgataaa--------taacacctcaatcacactt 248  Q
    |||||||||||||||||||||||| || ||||||| || |||||| ||| | |||| ||| || |||||||||        ||| || |||||||||| |    
T  2550397 gtttacttttcatttttaaattacagacactatgatatgtttttttaaacaattaaaataata-catgataaacaatcatataatacttcaatcacacgt 2550495  T
Q  249 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 348  Q
    |||||||| |||||||||||||||||||||||| |  ||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||||||||||    
T  2550496 aatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaaca 2550590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 22022962 - 22022907
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22022962 tcaatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaa 22022907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 20513491 - 20513561
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| |||||||||    
T  20513491 tttacttttcatttttaaactacagacactatgaaatgttttttaaaaagttaacatattatcatgataaa 20513561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 43607 - 43535
Alignment:
Q  158 gtttacttttcatttttaaa-ttacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| |||||    
T  43607 gtttacttttcatttttaaaattacgaacactatgaaatattttttgaaaagttaacatattaacataataaa 43535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 11756987 - 11756917
Alignment:
Q  239 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||| |||| ||||    
T  11756987 aatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaaataaaaacaaactctcc 11756917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 17024270 - 17024393
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    ||||||||||||||||||||| | || | |||||||| || |||||||||||| ||||||||||||| ||        |||| || ||||||  ||||||    
T  17024270 tttacttttcatttttaaattgcagacattatgaaatgttctttaaaaagttatcatattaacatgaaaaacgatcatataatacttcaatcgtacttaa 17024369  T
Q  251 tttattttagaaaaacatgttata 274  Q
    ||||||||||||||||||||||||    
T  17024370 tttattttagaaaaacatgttata 17024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 22023568 - 22023495
Alignment:
Q  158 gtttacttttcatttttaaattacggatact-atgaaatattttttaaaaa-gttaacatattaacatgataaa 229  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||    
T  22023568 gtttacttttcatttataaattacggatatttatgaaatgttttttaaaaaagttaacatattaacatgataaa 22023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 32727822 - 32727893
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    |||||| ||| ||||||||||||||| || ||||||||||||||||||||   |||||||||||||||||||    
T  32727822 gtttacattttatttttaaattacgggtattatgaaatattttttaaaaaacgaacatattaacatgataaa 32727893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 42681618 - 42681510
Alignment:
Q  192 aaatattttttaaaaagttaacatattaacatgataaat--------aacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgta 283  Q
    |||||||||||||||| |||| ||| |||||||||||||        || || | ||||||||| || ||||||||||||||||||||||||||||||||    
T  42681618 aaatattttttaaaaaattaaaataataacatgataaatgatcatataatactttaatcacactaaaattattttagaaaaacatgttatatagtccgta 42681519  T
Q  284 atttaaaaa 292  Q
    ||| |||||    
T  42681518 attaaaaaa 42681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 14245288 - 14245202
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||||||||||||||||||| ||| |||||| |||||    
T  14245288 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgttttt 14245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 11419303 - 11419360
Alignment:
Q  247 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||    
T  11419303 ttaatttattttagaaaaacatgttatataacccgtaatttaaaaaagaaaagtaaac 11419360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 14681581 - 14681520
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
    ||||||||| ||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  14681581 tcaatcacatttaatttattttaaaaaaacatgttatataatctgtaatttaaaaaagaaaa 14681520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 40815408 - 40815300
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacct 336  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||   ||||||  | || ||||||||| |||| ||    
T  40815408 tcaatcacacttt-tttattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaa---tcctct--cttcccttcccctcctaaatct 40815315  T
Q  337 ccaatccaaacacac 351  Q
     ||||||||||||||    
T  40815314 tcaatccaaacacac 40815300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactat 190  Q
    |||||||||||||||  ||||| |||||||||||| ||||  |||||  |||||||||||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 39966084 - 39966150
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    ||||||||  ||||||||||| | ||||| |||||||||| |||||||||||||||| |||||||||    
T  39966084 tcaatcacgtttaatttatttaaaaaaaatatgttatataatccgtaatttaaaaataaaaaataaa 39966150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 13634713 - 13634782
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| ||||||||| |||||    
T  13634713 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacgga 13634782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 17780279 - 17780340
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaat-attttttaaaaagttaacatatt 218  Q
    |||||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  17780279 gtttacttttcagttttaaattacggatattataaaatgtttttttaaaaagttaacatatt 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 26414895 - 26414964
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||  ||||||||||| |||||||||||||||    
T  26414895 ggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacgga 26414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 4423404 - 4423336
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataa 232  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| ||| ||||||||| | ||||||||    
T  4423404 ttttcatttttaaattacgaacattatgaaatatttttttaaaatttagcatattaacgtaataaataa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 10650427 - 10650517
Alignment:
Q  113 atggtgtgtttggatggaaagtttaggaggggaa--gggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    |||||| |||||||||||   |||||||||||||  |||| ||||   ||||||||| |||||||||||||||| |||||||||| |||||    
T  10650427 atggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgttttt 10650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 34980812 - 34980879
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||| |||||||||||||||||| || |  ||| |||||| ||||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacg 34980879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 1657969 - 1658054
Alignment:
Q  261 aaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||     |||||||| ||||||  | ||||||||||||    
T  1657969 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccc-----ttcccctcctaaaccctccatccaaacacac 1658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 14245218 - 14245287
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||||||||||||||||| |||||     |||||||| ||||||||| ||||||  ||||||||||||||    
T  14245218 gtccgtaatttaaaaatgaaaaacaaacc-----ctcccctcccttcccctcctaaaccctcaatccaaacacac 14245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 11419237 - 11419302
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat 223  Q
    |||||||||||||||| |||||| ||| | ||| |||| ||||| ||||||| |||||||||||||    
T  11419237 gtttacttttcattttcaaattaaggacaatataaaatgtttttaaaaaagtaaacatattaacat 11419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 2556215 - 2556167
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaa 206  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  2556215 gtttacttttcatttttaaattatggatgatataaaatattttttaaaa 2556167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 34980916 - 34980813
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 342  Q
    ||||||||||||||||| ||||| || |||  | || |||||||||||||| |||| | ||||     || ||||| ||||||||| ||||||| |||||    
T  34980916 acacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacc-----cttccctcccttcccctcctaaaccttcaatc 34980822  T
Q  343 caaacacac 351  Q
    |||||||||    
T  34980821 caaacacac 34980813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 315
Target Start/End: Complemental strand, 43481 - 43410
Alignment:
Q  245 acttaatttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||||||||||| ||||| ||||||||||| ||| ||||||||||| || || |||| |||| ||||||    
T  43481 acttaatttattttaaaaaaaacatgttatataatccctaatttaaaaaagagaagtaaatcctcatctccc 43410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaa 176  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 14684614 - 14684692
Alignment:
Q  237 tcaatcacacttaatttattt--tagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 313  Q
    |||||||||||||||||||||   | |||||||| |||||| | |||||||| ||||| ||||| ||| ||||||||||    
T  14684614 tcaatcacacttaatttatttaaaaaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctc 14684692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 29002251 - 29002322
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||||||||||||||| | | ||||| |||| ||||||  |||   |||||||||||||||||||    
T  29002251 gtttacttttcatttttaaattatgaacactataaaatgttttttttaaaaacaacatattaacatgataaa 29002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 351
Target Start/End: Original strand, 8551621 - 8551659
Alignment:
Q  313 cccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  8551621 cccctctcttcccctcctaaaccttcaatccaaacacac 8551659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 10476028 - 10476090
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa 177  Q
    |||||||||| || ||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  10476028 ggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 353
Target Start/End: Original strand, 12600703 - 12600745
Alignment:
Q  311 ctcccctctcttcccctcataaacctccaatccaaacacactt 353  Q
    |||||||||||||||||| |||||||  |||||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacactt 12600745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 33744190 - 33744260
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||||||||||  ||| ||| || ||||||| ||||  ||||||||||| |||||||||||    
T  33744190 tttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 40815299 - 40815365
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||| |||  ||||||||||||||||| | ||   |||||||||| ||||||||||||    
T  40815299 ggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 16938481 - 16938550
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||  ||||| ||||||| |||||||    
T  16938481 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacgga 16938550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 13298376 - 13298296
Alignment:
Q  239 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctct 319  Q
    ||||||||||||||||| ||  |||||| | |||||| ||||| |||||||||| ||||| |||   |||| |||||||||    
T  13298376 aatcacacttaatttatattgcaaaaacgttttatattgtccgcaatttaaaaaagaaaagtaagttctcccctcccctct 13298296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 31543078 - 31543282
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  ||||| |||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgtttttaaaaaagttaacatatt 31543177  T
Q  219 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcct 310  Q
    ||||| ||||        |||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||     
T  31543178 aacatcataaacggtcatataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaaagtaaaccctccc 31543277  T
Q  311 ctccc 315  Q
    |||||    
T  31543278 ctccc 31543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 121 - 320
Target Start/End: Original strand, 11575415 - 11575621
Alignment:
Q  121 tttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaa 220  Q
    ||||||||||   |||||||| |||||||| ||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11575415 tttggatggaggatttaggagaggaaggga-gggagggtttacttttcattcttaaattaaggatactatgaaatgttttttaaaaagttaacatattaa 11575513  T
Q  221 catgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctct 312  Q
    ||||||||        |||| || | |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||| ||    
T  11575514 catgataaacgatcatataatactttaatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaaatgaaaagtaaaccctcccct 11575613  T
Q  313 cccctctc 320  Q
    ||| ||||    
T  11575614 cccttctc 11575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 116 - 309
Target Start/End: Complemental strand, 16653190 - 16652989
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |  ||||| |||||||||||| | ||  ||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgtttttgaaaaagttaacat 16653091  T
Q  216 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |||||||  |||||        ||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  16653090 attaacaaaataaacgatcatataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccct 16652991  T
Q  308 cc 309  Q
    ||    
T  16652990 cc 16652989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 314
Target Start/End: Complemental strand, 11785768 - 11785561
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||||||||| ||| || ||||  ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  11785768 ggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatattttttaaaaagttagca 11785669  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || |||||| || ||||| |||||||||||||||||||||||||| | ||||||||||| ||||| ||||| |    
T  11785668 tattaacatgataaacaaacatataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaactc 11785569  T
Q  307 tcctctcc 314  Q
    ||| ||||    
T  11785568 tcccctcc 11785561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 308
Target Start/End: Complemental strand, 1281341 - 1281184
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||        |||| || |||| ||||||| |    
T  1281341 tttagttttcatttttaaattacggacactatgaaatattttttaaaaagttaacatattaacataataaacgataatataatacttcaaccacacttga 1281242  T
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  1281241 tttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctc 1281184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 115 - 335
Target Start/End: Complemental strand, 31738665 - 31738442
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||  | ||||  |||||  |||||||||||||||||||| ||||| ||||||||||| || ||||||||    
T  31738665 ggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatattttttgaagagttaaca 31738566  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        |||| || ||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||  ||||| |||       
T  31738565 tattaacatgataaatgatcatataatacttcaattacacttaatttattctagagaaacatgttatatagtctgtaatttaaaaaaaaaaaaaaaa--- 31738469  T
Q  307 tcctctcccctctcttcccctcataaacc 335  Q
      ||||||| |||||||||||| ||||||    
T  31738468 --ctctcccttctcttcccctcctaaacc 31738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 324
Target Start/End: Original strand, 1026894 - 1027067
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    |||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||        |||| || ||||||| |||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatattttatcaaaagttaacatattaacatgataaacgatcatataatacttcaatcatactta 1026993  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcc 324  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||| | ||||| || |||||    
T  1026994 atttattttagaaaaacat-ttatatagtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcc 1027067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 318
Target Start/End: Original strand, 7502999 - 7503167
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 249  Q
    |||| |||| ||||||||||||||  | |||||||||| |||| ||||||||||||||||||||||||||||        ||| || | |||||||||||    
T  7502999 gtttgctttccatttttaaattaccaaaactatgaaatgttttataaaaagttaacatattaacatgataaacaatcatataatactttaatcacactta 7503098  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctc 318  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||| ||||||||    
T  7503099 atttattttagaaaaacatgttatataatccataatttaaaaacgaaaagtaaaccctcccctcccctc 7503167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 117 - 351
Target Start/End: Original strand, 30479721 - 30479958
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacata 216  Q
    ||||||||||||||   ||||||||||| | ||| ||||  ||| |||||||||||||||||||| || |||||||||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtcttttaaaaagttaacata 30479820  T
Q  217 ttaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    ||||  ||||||        |||| || |||||||||||| ||||||||||||||||||||  |||||||| ||| |||||||| ||||| |||||||||    
T  30479821 ttaaggtgataaatgataatataatacttcaatcacacttgatttattttagaaaaacatgacatatagtctgtagtttaaaaaagaaaactaaaccctc 30479920  T
Q  309 ctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    | ||||      |||| ||||||||||  ||||||||||||||    
T  30479921 cgctcc-----attcctctcataaaccctcaatccaaacacac 30479958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 3726859 - 3727054
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaag 208  Q
    ||||| ||||||||||||||||  ||||||||||||||||||  |||  ||||| ||||||||||||||||||||| || ||| ||| ||||||||| ||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacaccatggaatgttttttaaatag 3726958  T
Q  209 ttaacatattaacatgataaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    |||||||  |||   |  | |||| |  |||||||  |||||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||    
T  3726959 ttaacatgataaacggtcatataatatttcaatcatgcttaatttattttagaaaaacatgttatatagtctgtaatctaaaaaagaaaagtaaac 3727054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 29358385 - 29358547
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacactta 249  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||        ||| || |||||||||||||    
T  29358385 gtttactttttatttttaaattacggacactataaaatattttttaaaaa-ttaacatattaacattataaacgatcctataatacttcaatcacactta 29358483  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa-taaaccctcctct 312  Q
    ||||||| |||||||| |||||||||| |||||| ||||||||||||||| ||||| |||||||    
T  29358484 atttattctagaaaaatatgttatataatccgtagtttaaaaatgaaaaagtaaacactcctct 29358547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 30664566 - 30664407
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatca 243  Q
    ||||||||||| |||||| |||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||||        |||| || |||||||    
T  30664566 gggaatgtttatttttcagttttaaattacggacattacaaaatattttttaaaaagttaacatattaatatgataaacggttatataatacttcaatca 30664467  T
Q  244 cacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    ||||||||||||||| ||||||||||||||| |||| | |||||||||| ||||||||||    
T  30664466 cacttaatttatttttgaaaaacatgttataaagtctgcaatttaaaaaagaaaaataaa 30664407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 157 - 315
Target Start/End: Complemental strand, 7979340 - 7979174
Alignment:
Q  157 tgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaataac--------acctcaatcacactt 248  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||  ||||| ||||||||||||||||||         || |||||  |||||    
T  7979340 tgtttacttttcatttttaaattacggacaccgtgaaatgtttattaaaagtttaacttattaacatgataaataatcatataatacttcaattgcactt 7979241  T
Q  249 aatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  7979240 gatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcctctccc 7979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 34634385 - 34634277
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||| | |||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  34634385 ggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatatcttttaaaaagttaaca 34634286  T
Q  215 tattaacat 223  Q
    |||||||||    
T  34634285 tattaacat 34634277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 119 - 315
Target Start/End: Complemental strand, 36309081 - 36308876
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||||||| ||||||||||| | | | |||||||| |||| |||||| ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaaagtaaacatatt 36308982  T
Q  219 aacatgataa--------ataacacctcaatcacacttaatttatttta-gaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||||||        |||| || ||||||||||||| |||||||||  |||||||||||||||||||  || ||||| || ||||||| ||||||||    
T  36308981 aacatgataaacaatcatataatacttcaatcacacttagtttattttataaaaaacatgttatatagtctctagtttaacaaagaaaaatgaaccctcc 36308882  T
Q  310 tctccc 315  Q
     |||||    
T  36308881 cctccc 36308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 6315255 - 6315119
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 255  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||| ||||||||||||| |||||||        ||| || |||||||||||||||||||    
T  6315255 ttttcatttttaaaatacggacactatgaaatgtttttaaaaaaattaacatattaacttgataaacgatcgtataatacttcaatcacacttaatttat 6315156  T
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6315155 tttagaaaaacatgttatatagtccgtaattaaaaaa 6315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 37923123 - 37923280
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||||| |||||| |||||||||||||||        |||| |  | |||| ||||||    
T  37923123 gtttacttttcatttttaaattatgaacactatgaaatgttttttaaagagttaaaatattaacatgataaatgatcatataatattttaatcgcactta 37923222  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||    
T  37923223 atttattttagaaaaacatgttatatagtctgtaatttaaaaataaatattaaaccct 37923280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 116 - 311
Target Start/End: Complemental strand, 11033659 - 11033455
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt-aaaaagttaaca 214  Q
    |||| ||| ||||||  |||||||||| ||||||| | |||  ||||||||||| |||||||||| | ||| |||||||| |||||| ||||| ||||||    
T  11033659 gtgtctttagatggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaaattaaca 11033560  T
Q  215 tattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    |||||||||||||||        |||    |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||||||    
T  11033559 tattaacatgataaacgatcatataattattcaatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaaaagaaaagtaaaccc 11033460  T
Q  307 tcctc 311  Q
     ||||    
T  11033459 ccctc 11033455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 351
Target Start/End: Original strand, 9718530 - 9718720
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttat 255  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||        |||| || ||||||||| |||||  ||    
T  9718530 ttttcatttttaaattacggacactatgaaatggtttttaaaaagttagcatattaacatgataaacaatcatataatacttcaatcacaattaatgaat 9718629  T
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||| |||||||||||| | ||||||||||| ||||| ||||     || ||||||| |||| |||| ||||||  ||||||||||||||    
T  9718630 tttagaaaaatatgttatatagttcataatttaaaaaagaaaagtaaa-----ctttcccctcccttctcctcctaaaccctcaatccaaacacac 9718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 309
Target Start/End: Complemental strand, 37032561 - 37032419
Alignment:
Q  175 aaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaac 266  Q
    |||||||||| |||| ||| | |||||||||||||||||||||||| ||||||||        ||| || | ||||||||||||||||||||| ||||||    
T  37032561 aaattacggacactaggaagtgttttttaaaaagttaacatattaagatgataaactatcatataatactttaatcacacttaatttattttaaaaaaac 37032462  T
Q  267 atgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||    
T  37032461 atgttatatagtctgtaatttaaaaaagaaaaataaactctcc 37032419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 351
Target Start/End: Complemental strand, 2248666 - 2248455
Alignment:
Q  143 ggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataaca 234  Q
    |||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||  |||        |||| |    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatatttttttaaaagttaacttattaacatcgtaaacggtcatataata 2248567  T
Q  235 cctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaac 334  Q
       ||||||||||| |||||||||||||||||||||||||||  |||||||||||||| | ||| | ||     |||||||||| ||||||||| |||||    
T  2248566 ttccaatcacacttgatttattttagaaaaacatgttatataaaccgtaatttaaaaaaggaaattgaa-----ctctcccctcccttcccctcctaaac 2248472  T
Q  335 ctccaatccaaacacac 351  Q
       ||||||||||||||    
T  2248471 tctcaatccaaacacac 2248455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 115 - 308
Target Start/End: Original strand, 41103506 - 41103709
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaa--ttacggatactatgaaatattttttaaaaagttaa 212  Q
    ||||||||||||||||  ||||||||||||||| || ||||  ||||  ||||| ||||||||  ||| ||| |||||||||  ||||| ||||| ||||    
T  41103506 ggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaattaa 41103605  T
Q  213 catattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
     | | ||||||||||||        ||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||||    
T  41103606 aacaataacatgataaacgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaac 41103705  T
Q  305 cctc 308  Q
    ||||    
T  41103706 cctc 41103709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 28083934 - 28083792
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttatt 256  Q
    |||| ||||||||||||||||||||||| || ||||||||| ||||||||| | |||||||||||        ||| ||  |||||||||||||||||||    
T  28083934 tttcttttttaaattacggatactatgatatgttttttaaagagttaacatgtcaacatgataaacaatcatataatactccaatcacacttaatttatt 28083835  T
Q  257 ttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaa 299  Q
    ||||| ||||||||||||| ||| |||||||||||| ||||||    
T  28083834 ttagagaaacatgttatattgtctgtaatttaaaaaagaaaaa 28083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 29690925 - 29691038
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |||||||||||||  ||| || | ||  ||||||||||||||| |||  ||| ||||||| ||||||||||| |||||||||||||    
T  29690925 gtgtgtttggatgaaaagtttaggaggaaaagagacgagagagtttacttttcatttataacatactgatactaggaaatatttttaaaaaagttaacat 29691024  T
Q  216 attaacatgataaa 229  Q
    ||||||||||||||    
T  29691025 attaacatgataaa 29691038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 304
Target Start/End: Original strand, 40990183 - 40990383
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatt-acggatactatgaaatatttttt--aaaaagtta 211  Q
    ||||||||||||||||  |||| ||||  ||| ||| ||||  |||||  |||||||||| |||| |  || |||||||||| ||||||  ||| |||||    
T  40990183 ggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttttaaagagtta 40990282  T
Q  212 acatattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||||||||||||||||        |||| || ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||    
T  40990283 acatattaacatgataagcgatcatataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaa 40990382  T
Q  304 c 304  Q
    |    
T  40990383 c 40990383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 42650468 - 42650540
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  42650468 tcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacgaaaagtaaactctcc 42650540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 351
Target Start/End: Original strand, 4247563 - 4247761
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||| |||||||||||||| ||||||||        |||| || | ||||| |||||    
T  4247563 gtttactttttatttttaaattacggc-actttaaaatattttttaagaagttaacatattagcatgataaacgatcatataatacttaaatcatactta 4247661  T
Q  250 atttattttagaaaaacatgttatatagtccgtaattt-aaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 348  Q
    |||||||||| |||||||| |   ||| | | |||||| ||||| ||||| |||||||||||||  |||| ||||||||| ||||||| |||||||||||    
T  4247662 atttattttaaaaaaacatat--aataattcataatttaaaaaaagaaaagtaaaccctcctct-acctcccttcccctcctaaaccttcaatccaaaca 4247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 43732929 - 43732860
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  43732929 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 10028347 - 10028259
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatt-ttttaaaaagttaacatattaa 220  Q
    ||||||||| ||||| || ||||  |||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  10028347 gtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatattttttttaaaagttaacatattaa 10028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 33922680 - 33922560
Alignment:
Q  197 ttttttaaaaagttaacatattaacatgataaataac--------acctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattta 288  Q
    ||||||||||||||||||||||| ||||||||| ||         || ||||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaacaatcatatcatacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaattta 33922581  T
Q  289 aaaatgaaaaataaaccctcc 309  Q
    |||| ||||| ||||| ||||    
T  33922580 aaaaagaaaagtaaactctcc 33922560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 10028222 - 10028156
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||| ||||    
T  10028222 tcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaa 10028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 13405178 - 13405027
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagt----taacatattaacatgataaa--------taacacctcaatcacac 246  Q
    |||||||||||||||||||||||||| | ||  ||||||||||| ||||||    |||| |||||||||||||||        ||| |  ||||| | |     
T  13405178 tttacttttcatttttaaattacggacattaaaaaatatttttttaaaagtgaattaacgtattaacatgataaacgatcatataataattcaattatat 13405079  T
Q  247 ttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
     |||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  13405078 ataatttattttagaaaaacatgttatatagtctgttatttaaaaaagaaaa 13405027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 9718730 - 9718656
Alignment:
Q  106 ttgttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||||| | ||||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9718730 ttgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 1281149 - 1281214
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||| ||  |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacgga 1281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 16024394 - 16024327
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||||||   ||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacgga 16024327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 31543319 - 31543249
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||| ||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 35694828 - 35694862
Alignment:
Q  186 actatgaaatattttttaaaaagttaacatattaa 220  Q
    |||||||||||||||||||||||||||||||||||    
T  35694828 actatgaaatattttttaaaaagttaacatattaa 35694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 12022281 - 12022330
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||||    
T  12022281 acacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaa 12022330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 2248454 - 2248522
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgg 183  Q
    ||||||||||||| || ||||||||||||||||||| ||||  ||| | ||| | ||||||||||||||    
T  2248454 ggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacgg 2248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 8815383 - 8815316
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||  |||||||||||| ||||| ||||  ||| |||||| ||||||||||||||    
T  8815383 ggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 24243052 - 24243164
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    |||||||||||||||| |||||| || ||||||||| ||||    |||||||||||||| ||||||| || ||||| |||| | ||||||||| || | |    
T  24243052 ggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattac-gacactataaaatgtcttttaaaaa-ttgaaa 24243148  T
Q  215 tattaacatgataaat 230  Q
    || |||||||||||||    
T  24243149 taataacatgataaat 24243164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 3726935 - 3726897
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  3726935 gtccgtaatttaaaaatgaaaaataaaccgtcctttccc 3726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 5562012 - 5562058
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaa 206  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaa 5562058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 30365126 - 30365219
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttt 202  Q
    ||||| ||||||||||||| ||  |||||||||| ||| ||| ||||  ||| |||||| |||||||||||||| | |  || |||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttt 30365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 31543143 - 31543106
Alignment:
Q  278 tccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  31543143 tccgtaatttaaaaatgaaaagtaaaccctcccctccc 31543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 38198181 - 38198241
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
    |||||||||||||||| |||||| |||||||  |||||  ||| ||||||||||||||||||    
T  38198181 tcaatcacacttaattcatttta-aaaaacactttatagtgtctgtaatttaaaaatgaaaa 38198241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 42919912 - 42919879
Alignment:
Q  173 ttaaattacggatactatgaaatattttttaaaa 206  Q
    |||||||||||||||||| |||||||||||||||    
T  42919912 ttaaattacggatactataaaatattttttaaaa 42919879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 7503202 - 7503126
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggat 185  Q
    ||||| ||||||||||||| ||   ||| |||||||| |||| ||||  ||||||||||| ||||||||||| ||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggat 7503126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||||||||||  |  |||||||| | ||||||| ||||  ||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 115 - 315
Target Start/End: Original strand, 41496959 - 41497167
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||   ||||||||| |||||||||||||||| | || ||||| ||||||||||| ||||||    
T  41496959 ggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatgttttttaaaaatttaaca 41497058  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccc 306  Q
    ||||||||||||||        ||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  41497059 tattaacatgataaatgatcatataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccc 41497158  T
Q  307 tcctctccc 315  Q
    ||| |||||    
T  41497159 tcccctccc 41497167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 158 - 352
Target Start/End: Original strand, 33655153 - 33655350
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacactta 249  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||        |||| || |||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagttaacatattaacatgataaatgatcatataatacttcaatcacactta 33655252  T
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacac 349  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||     ||| |||||||||||||| ||||||  ||||||||||||    
T  33655253 atttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaacc-----ctcgcctctcttcccctcctaaaccctcaatccaaacac 33655347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 134 - 304
Target Start/End: Original strand, 24970187 - 24970364
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa----- 228  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||         
T  24970187 tttaggaggggaagg-aggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacttgataaacgat 24970285  T
Q  229 ---ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
       |||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  24970286 catataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaaagaaaaacaaac 24970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 115 - 315
Target Start/End: Complemental strand, 47391098 - 47390889
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  47391098 ggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaacattttttaaaatgttaaca 47390999  T
Q  215 tattaacatgataa---------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||||||||||||||         |||| || ||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  47390998 tattaacatgataaacaagtcatataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacc 47390899  T
Q  306 ctcctctccc 315  Q
    |||| |||||    
T  47390898 ctccactccc 47390889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 115 - 305
Target Start/End: Original strand, 40196534 - 40196732
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||| |||||||||||||  |||  ||||||||||||||||| ||||||||| ||||| |||| |||| |||||||||||||    
T  40196534 ggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagttaaca 40196633  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaacc 305  Q
    ||| ||| ||||||        |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||    
T  40196634 tatcaacctgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacaaaaagtaaacc 40196732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 314
Target Start/End: Original strand, 34235053 - 34235219
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34235053 tttacttttcatttttaaattacggacactatgaaatgttttataaaaagttaacatattaatatgataaacaatcatataatacttcaatcacacttaa 34235152  T
Q  251 tttattttag-aaaaacatgttatatagtccgtaatttaaaaatgaaaaataa--accctcctctcc 314  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||  ||||||||||||    
T  34235153 tttattttagaaaaaacatgttatataatccgtaatttaaaaatgaaaagtaaacaccctcctctcc 34235219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 116 - 307
Target Start/End: Complemental strand, 42306571 - 42306376
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    |||||||||||| ||  ||||||||||||||  || ||||  ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgttttttaaaaagttagcat 42306472  T
Q  216 attaacatgataa----ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    |||||| | ||||    |||| ||  ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||  |||||||    
T  42306471 attaacctcataaacatataatactccaatcacgcttaatttattttagaaatacatgttatatagtcggtaatttaaaaaagaaaatcaaaccct 42306376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 110 - 351
Target Start/End: Original strand, 13770945 - 13771187
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||| ||   ||||||||||||||||| ||||   ||||||| | |||||||||||||||| ||||| ||||||| |  |||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaatattat--aaaaagt 13771042  T
Q  210 taacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaata 301  Q
    ||||||||||||||||||||        ||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||    
T  13771043 taacatattaacatgataaacaatgatataacactcgaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagta 13771142  T
Q  302 aaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||     ||||| |||| ||||||||| ||||||  ||||| ||||||||    
T  13771143 aa-----ctctcacctcccttcccctcctaaaccctcaatctaaacacac 13771187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 351
Target Start/End: Complemental strand, 25887417 - 25887195
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatatttttta-aaaagttaacatattaacatgataaa-- 229  Q
    |||||||||||||||||| ||||  |||||| |||||||||||||||||| | |  ||||||| ||||||  ||||||||||||||||| ||||||||      
T  25887417 gtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaaaatcatgaaatgttttttttaaaagttaacatattaatatgataaaca 25887318  T
Q  230 ------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttc 323  Q
          ||| ||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |     |||||||| ||||    
T  25887317 atcatataatactccaatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaagaaaaacaaatc-----ctcccctcccttc 25887223  T
Q  324 ccctcataaacctccaatccaaacacac 351  Q
    ||||||||||||  ||||||||||||||    
T  25887222 ccctcataaaccctcaatccaaacacac 25887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 133 - 351
Target Start/End: Original strand, 1051520 - 1051739
Alignment:
Q  133 gtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--- 229  Q
    ||||||||||||||  || ||||  ||| || |||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||       
T  1051520 gtttaggaggggaatagaggggagggttaacatttcatttttaaattacggacac-atgaaatgttttttaaaaagttaacatatta-catgataaacaa 1051617  T
Q  230 -----taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcc 324  Q
         |||  | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||   ||||||  |||| |||||    
T  1051618 tcatataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaaaagaaaaataaa---tcctct--cctcccttcc 1051712  T
Q  325 cctcataaacctccaatccaaacacac 351  Q
    |||| ||||||  ||||||||||||||    
T  1051713 cctcctaaaccctcaatccaaacacac 1051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 116 - 309
Target Start/End: Complemental strand, 43230476 - 43230276
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||||| |  ||||| ||| |||| | | ||||  |||||||||| |||||||||||||||| ||| |||| | |||||| ||||||||||||    
T  43230476 gtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact-tgaattttttttttaaaagttaacat 43230378  T
Q  216 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    ||||||||||||||        |||  | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  43230377 attaacatgataaacgatcgtataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaaaagtaaaccct 43230278  T
Q  308 cc 309  Q
    ||    
T  43230277 cc 43230276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 18231828 - 18231714
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||   |||||||||||||||||||||||  | |||||||||| ||||||||||||||||||    
T  18231828 ggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaatgttttttaaaaagttaaca 18231729  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  18231728 tattaacatgataaa 18231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 4833537 - 4833647
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaatgttttataaaaagttaacctatt 4833636  T
Q  219 aacatgataaa 229  Q
    |||||||||||    
T  4833637 aacatgataaa 4833647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 348
Target Start/End: Complemental strand, 41008425 - 41008188
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt--taaaaa 207  Q
    |||| |||||||||||||| |  |||||||||||||||| |   ||  |||||| ||||||||||||||||||||||||||||  | ||| |  | ||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaa---ga--gtttacatttcatttttaaattacggatactatgatttttttgtcttcaaaa 41008331  T
Q  208 gttaacatattaacatgataaataac------acctcaatcacacttaatttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaat 300  Q
    |||||||||||||||||||||| ||       || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||     
T  41008330 gttaacatattaacatgataaacaatcatataacttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaagaaaaac 41008231  T
Q  301 aaaccctcctctcccctctcttcccctcataaacctccaatccaaaca 348  Q
    |||      ||||||||| |||||||||  |||||  |||||||||||    
T  41008230 aaa-----ttctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 115 - 284
Target Start/End: Original strand, 45940658 - 45940835
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||| |||||| ||||||||||| || || |||||||||| ||||||| |||||||| |||||||||| ||||||| |||| ||  |    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaatgttttttacaaagatagta 45940757  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaa 284  Q
    ||||||||| ||||        |||| || ||||| ||| ||||||||||||||||||| ||||||||||||| ||||    
T  45940758 tattaacataataagcgataatataatacttcaattacatttaatttattttagaaaaatatgttatatagtctgtaa 45940835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 351
Target Start/End: Original strand, 39856001 - 39856106
Alignment:
Q  241 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||     |||||||| ||||||||| ||||||  |||    
T  39856001 tcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacc-----ctcccctcccttcccctcctaaaccctcaa 39856095  T
Q  341 tccaaacacac 351  Q
    |||||||||||    
T  39856096 tccaaacacac 39856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 160 - 314
Target Start/End: Complemental strand, 17853067 - 17852906
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaat 251  Q
    |||||||||||||||||||||||   ||||||||| | ||||||||||| ||| |||  |||||||||||        ||| ||||||||||||||||||    
T  17853067 ttacttttcatttttaaattacgagcactatgaaa-agtttttaaaaagataaaataacaacatgataaacgatcatataatacctcaatcacacttaat 17852969  T
Q  252 ttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||| ||| |||||| ||||    
T  17852968 ttattttagaaaaacatgttatttaatccgtaatttaaaaaagaaaagtaatccctcccctcc 17852906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 34228364 - 34228534
Alignment:
Q  159 tttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaa 250  Q
    |||||||| ||||||  ||||||||| ||||||||   ||| | |||||||||||||||||| |||||||        |||| || ||||||||||||||    
T  34228364 tttactttacattttgtaattacggacactatgaatgttttataaaaaagttaacatattaatatgataagcaatcatataatacttcaatcacacttaa 34228463  T
Q  251 tttattttagaaaaacatgttatatag-tccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 320  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||||| ||||| ||||    
T  34228464 tttattttagaaaaacatgttatatagttccgtaattttaaaatgaaaagtaaatcctcccctcccttctc 34228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 292
Target Start/End: Original strand, 40572287 - 40572421
Alignment:
Q  165 tttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttatt 256  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||        |||| || | |||||| |||||||||||    
T  40572287 tttcatttttaaattacggatgctataaaatatttttt-aaaagttaacatattaacatgataaaaggtcatataatactttaatcacgcttaatttatt 40572385  T
Q  257 ttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||||| |||||| |||||||||||||||||| ||||    
T  40572386 ttagagaaacatattatatagtccgtaattttaaaa 40572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 10315872 - 10315761
Alignment:
Q  118 gtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatat 217  Q
    |||||||||||||| ||||||||||||||||||  ||    |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  10315872 gtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgttttttaaaaatttaacatat 10315773  T
Q  218 taacatgataaa 229  Q
    ||||| ||||||    
T  10315772 taacaagataaa 10315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 186 - 314
Target Start/End: Original strand, 37417706 - 37417842
Alignment:
Q  186 actatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatag 277  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||        ||| || |||||||||||||| ||| ||| ||||||||||||||||||    
T  37417706 actatgaaatgttttctaaaaagttaacatattcacatgataaacgatcatataatacttcaatcacacttaacttaattttgaaaaacatgttatatag 37417805  T
Q  278 tccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    ||||| ||||||||||||||| |||||| ||| ||||    
T  37417806 tccgttatttaaaaatgaaaagtaaaccatcccctcc 37417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 32872826 - 32872897
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  32872826 gtttacttttcttttttaaattacgaatattataaaatactttttaaaaagttaacatattaacatgataaa 32872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 13425122 - 13425236
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||| ||  |||||||||||||||| |  |||  ||||| |||| ||||||||||||| || ||||  ||||||||||| |||||| ||||    
T  13425122 ggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacactacaaaatattttttcaaaagtcaaca 13425221  T
Q  215 tattaacatgataaa 229  Q
    |||||||||||||||    
T  13425222 tattaacatgataaa 13425236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 22163167 - 22163272
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 261  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22163167 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22163265  T
Q  262 aaaacat 268  Q
    |||||||    
T  22163266 aaaacat 22163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 22221875 - 22221980
Alignment:
Q  170 tttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa--------ataacacctcaatcacacttaatttattttaga 261  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||||        |||| || |||||||||||||||||||||||||    
T  22221875 tttttaaattacggacactatgaaatgttttttagaaag-taacatattaacatgataaacgatcatataatacttcaatcacacttaatttattttaga 22221973  T
Q  262 aaaacat 268  Q
    |||||||    
T  22221974 aaaacat 22221980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 352
Target Start/End: Complemental strand, 26366009 - 26365769
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacat 215  Q
    ||||||||||| |||  ||||| || |||||| || ||||  ||||  ||||| ||||||||||| ||||||||  |||||||||||  ||| |||| ||    
T  26366009 gtgtgtttggacggagggtttaagatgggaagagaggggatagtttgattttcgtttttaaattatggatactacaaaatattttttttaaaattaaaat 26365910  T
Q  216 attaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccct 307  Q
    | |||||||| |||        ||| || |||||||||| || ||||||||||||||| ||||||||||||  ||||| |||||| ||||| ||||| ||    
T  26365909 aataacatgagaaacaatcatataatacttcaatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagtaaactct 26365810  T
Q  308 cctctcccctctcttcccctcataaacctccaatccaaacacact 352  Q
    |  ||||| ||    |||||| ||||||  |||||||||||||||    
T  26365809 caactcccttc----cccctcctaaaccctcaatccaaacacact 26365769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 31571600 - 31571711
Alignment:
Q  237 tcaatcacacttaat-ttattttagaaaaa-catgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaac 334  Q
    ||||||||||||||| || ||||| ||||| |||||||||| |||||||||||||||| ||||| ||||     |||||||||| ||||||||| |||||    
T  31571600 tcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaa-----ctctcccctcgcttcccctcctaaac 31571694  T
Q  335 ctccaatccaaacacac 351  Q
    |  ||||||||||||||    
T  31571695 cctcaatccaaacacac 31571711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 48881560 - 48881646
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| ||||||||||||||| | ||| ||||| ||||    
T  48881560 ggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataatttt 48881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 23029480 - 23029537
Alignment:
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctc 308  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  23029480 tttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctc 23029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 39856107 - 39856038
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  39856107 ggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 39856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 195
Target Start/End: Original strand, 36267555 - 36267635
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaat 195  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||| ||||| ||||||||||||||||| ||| ||||    
T  36267555 ggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaat 36267635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 42087188 - 42087041
Alignment:
Q  164 ttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa--------taacacctcaatcacacttaatttat 255  Q
    |||||||||||||||||||| || |||  ||  ||||||||||||||| ||||||||| ||| |||        ||| |  ||||| |||||||||||||    
T  42087188 ttttcatttttaaattacgggtattatacaaagttttttaaaaagttagcatattaacgtgacaaacgattatataataattcaattacacttaatttat 42087089  T
Q  256 tttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaa 303  Q
    |||| || || |||||||||| | |||||||| |||| ||||||||||    
T  42087088 tttaaaataatatgttatataattcgtaattttaaaaagaaaaataaa 42087041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 31571712 - 31571643
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  31571712 ggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacgga 31571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 10315712 - 10315648
Alignment:
Q  250 atttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcc 314  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||||| |||| ||||| ||||    
T  10315712 atttattttagaaaaatatgttatatagtctgaaatttaaaaaagaaaagtaaatcctcccctcc 10315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 19835906 - 19835838
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataa 228  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||| |||| ||| |||||| ||||    
T  19835906 ttacttttcatttttaaattacggaaactataaaatgttctttaaaaaattaaaataataacatcataa 19835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 31553182 - 31553287
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagt 209  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||  ||  |||||| ||||| |||| ||||| | |||||||| |||||||||||||    
T  31553182 tttagggtgtgtttggatggag-gtttaggaggggaagggaggagagggtc-acttttaatttt-aaataacggacattatgaaatgttttttaaaaagt 31553278  T
Q  210 taacatatt 218  Q
    |||||||||    
T  31553279 taacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 292
Target Start/End: Complemental strand, 33519290 - 33519105
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||||||||||||||  |||||||||||||||||| ||||  | ||||||||| | |||||||||| || | ||| ||||  |||||| ||| || |      
T  33519290 ggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaat 33519191  T
Q  215 tattaacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    ||  ||||||||||        |||| || ||||  ||||||||||||||| | |||||||| |||||| || |||||||||||||    
T  33519190 taacaacatgataaatgatcatataatacttcaaaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaa 33519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 47229888 - 47229948
Alignment:
Q  169 atttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa 229  Q
    ||||||||| ||||| || |||||||||||| ||||||||  |||||||||||||||||||    
T  47229888 atttttaaactacgggtattatgaaatatttcttaaaaagcgaacatattaacatgataaa 47229948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 48152092 - 48152036
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaa 297  Q
    ||||||||||| ||||||||||||||||||||||||||    |||||||||||||| ||||    
T  48152092 tcaatcacactaaatttattttagaaaaacatgttata----ccgtaatttaaaaaagaaa 48152036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 13771188 - 13771119
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||| ||| ||  |||||||||||||||||| | ||  ||||||||||| |||||||||||||||    
T  13771188 ggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacgga 13771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 28074105 - 28074174
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||| |||||||||||||||||| ||||    | ||||||| |||||||||||||||    
T  28074105 ggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 232
Target Start/End: Original strand, 30592255 - 30592372
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaaca 214  Q
    ||||| ||||||||||   |||||||||| |||||| ||||  | ||||||||| |||||||||||| || ||||| ||||  |||||||||| || | |    
T  30592255 ggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaa 30592354  T
Q  215 tattaacatgataaataa 232  Q
    || | | |||||||||||    
T  30592355 taatcatatgataaataa 30592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 34228561 - 34228492
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||| || ||| |||||||||| ||||||| ||||   ||||||||||||||| ||||||||||    
T  34228561 ggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacgga 34228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 38378165 - 38378096
Alignment:
Q  229 ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
    |||| |||||||| ||| || |||||||||  |||||||||||||||||| |||| |||||||| |||||    
T  38378165 ataatacctcaattacaattgatttatttttaaaaaacatgttatatagttcgtagtttaaaaaagaaaa 38378096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 40196619 - 40196566
Alignment:
Q  262 aaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctccc 315  Q
    ||||||| |||||  |||||||||| ||||||||||| ||||||||||||||||    
T  40196619 aaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctccc 40196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 2087786 - 2087833
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  2087786 ttacttttcttttttaaattacggatattataaaataatttttaaaaa 2087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 30891039 - 30891078
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatat 197  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  30891039 gtttacttttcatttttaaattacggacactataaaatat 30891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 37925843 - 37925910
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacg 182  Q
    ||||||||||||| ||  |||||||||||||||||| ||||  ||| ||||||  |||||||||||||    
T  37925843 ggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacg 37925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 47390852 - 47390922
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||| ||||||||||||| ||  | ||||||||||||||||  |||  ||||||||||| |||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 48013608 - 48013558
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaat 293  Q
    ||||||||||||||||| |||||||| ||| || || ||||||||||||||    
T  48013608 acacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaat 48013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 18795727 - 18795788
Alignment:
Q  237 tcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaa 298  Q
    ||||| |||||| |||| ||||| |||||||| |||||| || ||||||||||||| |||||    
T  18795727 tcaataacacttgatttgttttaaaaaaacattttatattgttcgtaatttaaaaaagaaaa 18795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 351
Target Start/End: Complemental strand, 28074147 - 28074106
Alignment:
Q  310 tctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  28074147 tctcccctcccttcccctcctaaaccttcaatccaaacacac 28074106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 33655180 - 33655148
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    |||||||||||||||||||||| ||||||||||    
T  33655180 gtccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    |||||||||||| ||  ||||||||||||||| || | ||  ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 34235208 - 34235180
Alignment:
Q  157 tgtttacttttcatttttaaattacggat 185  Q
    |||||||||||||||||||||||||||||    
T  34235208 tgtttacttttcatttttaaattacggat 34235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 37925947 - 37925844
Alignment:
Q  243 acacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatc 342  Q
    ||||||||| ||||| | |||||||| ||| || || |||||||||||||  |||| | ||||     |||||||| ||||||||| ||||||  |||||    
T  37925947 acacttaatctatttaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgaacc-----ctcccctcccttcccctcctaaaccctcaatc 37925853  T
Q  343 caaacacac 351  Q
    |||||||||    
T  37925852 caaacacac 37925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 109 - 315
Target Start/End: Original strand, 39182 - 39400
Alignment:
Q  109 ttttatggtgtgtttggatggaaagtttaggaggggaaggga-tgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||| ||||||||||||||||  ||||||||||||||  ||  ||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 39281  T
Q  208 gttaacatattaacatgataaat-aaca----------cctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaa 296  Q
    ||||||||||||||||||||||| | ||          | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  39282 gttaacatattaacatgataaatgatcatataatacttcttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaa 39381  T
Q  297 aaataaaccctcctctccc 315  Q
    || |||||||||| |||||    
T  39382 aagtaaaccctcccctccc 39400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 39432 - 39363
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    ||||||||||||| ||  |||||| |||| |||||| ||||  ||||||||||| |||||||||||||||    
T  39432 ggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacgga 39363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 39259 - 39189
Alignment:
Q  277 gtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctccaatccaaacacac 351  Q
    |||||||||||||||||||||| |||||||||    ||||||  |||||||| ||||||  | ||||||||||||    
T  39259 gtccgtaatttaaaaatgaaaagtaaaccctc----cccctcatttcccctcctaaaccctccatccaaacacac 39189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 119 - 309
Target Start/End: Original strand, 16302 - 16500
Alignment:
Q  119 tgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatatt 218  Q
    ||||||||||||  ||||||||||| || ||| ||||  ||||||||||||||||||||||| | | |||||||||| |||| ||||| |||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatgttttataaaacgttaacatatt 16401  T
Q  219 aacatgataa--------ataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcc 309  Q
    ||||||||||        |||| || ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  16402 aacatgataaacaatcatataatacttcaatcacacttaatttattttagacaaacatgttatatagtccgtgagttaaaaacgaaaagtaaaccctcc 16500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 134 - 304
Target Start/End: Complemental strand, 16173 - 15995
Alignment:
Q  134 tttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatga-------- 225  Q
    ||||||||||||||||| |  |  ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||            
T  16173 tttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaatgttttttaaaaagttaacatattaatatgaaaaacaat 16074  T
Q  226 taaataacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaac 304  Q
    || | || || |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||| ||||| |||||    
T  16073 tataaaatacttcaatcacacataattttttttaaaaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaac 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 320
Target Start/End: Complemental strand, 6780 - 6613
Alignment:
Q  160 ttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacat------gataa-ataacacctcaatcacacttaatt 252  Q
    ||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| ||||||||||      ||| | |||| || ||||||||||| ||||    
T  6780 ttacttttcgtttttaaattacgcacactatgaaatatttttaaaaaaattaaaatattaacatataaacgatcatataatacttcaatcacactaaatt 6681  T
Q  253 tattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctc 320  Q
    |||||||||| |||| ||||||||||| |||||||||||| ||||| |||||||||| ||||| ||||    
T  6680 tattttagaataacaagttatatagtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctc 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 6581 - 6652
Alignment:
Q  110 tttatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    |||| ||||||||||||| |||  ||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 18968 - 18807
Alignment:
Q  158 gtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa-------taacacctcaatcacacttaa 250  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| ||||||| ||||||||||||||||       ||| |  ||||| |||| |||    
T  18968 gtttacttttcatttttaaatcgaggacactatgaactattttttaagaagttaatatattaacatgataaagatcatataataattcaatgacacataa 18869  T
Q  251 tttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctc 313  Q
    ||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  18868 tttattttagaaagacatgttatatagtctgtcatttaaaaaag-aaaataaaccctcctctc 18807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 112 - 292
Target Start/End: Complemental strand, 15507 - 15320
Alignment:
Q  112 tatggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagtta 211  Q
    |||||||||||||||||||  |||||||| |||||||||   ||   | ||||||| |||||||||||||||| |||||||| | |||||||||| || |    
T  15507 tatggtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggacactatgaa-tgttttttaaaaggtca 15409  T
Q  212 acatattaacatgataaa--------taacacctcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 292  Q
    |||||||||| |||||||        ||| || |||| |||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  15408 acatattaacgtgataaacaatcatataatacttcaaccacacttaatttattttagaaaaacatgttatgtaatccgtagtttaaaaa 15320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 152 - 352
Target Start/End: Complemental strand, 1377 - 1174
Alignment:
Q  152 gggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaagttaacatattaacatgataaa------------taacacctca 239  Q
    ||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||  |||||||||            ||| || |||    
T  1377 gggaaggtttacttttcatttttaaattatgaacactatgaaatgttttttaaaaagttaacatattgtcatgataaacgatcatatatataatacttca 1278  T
Q  240 atcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaaaataaaccctcctctcccctctcttcccctcataaacctcca 339  Q
     ||| |||||||||    ||||| ||||||||| ||||||||||||||||||| ||||| ||||     |||||||||||||||||||| ||||||  ||    
T  1277 gtcatacttaattt----tagaataacatgttacatagtccgtaatttaaaaaagaaaagtaaa-----ctctcccctctcttcccctcctaaaccctca 1187  T
Q  340 atccaaacacact 352  Q
    |||||||||||||    
T  1186 atccaaacacact 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 1175 - 1243
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacgga 184  Q
    |||||||||||| ||  ||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacgga 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  116 gtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttt 201  Q
    |||||||||||| || ||||||||||||||||||| ||||  ||||||||||| |||||||||||| || |||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 242456 - 242366
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattacggatactatgaaatattttttaaaaa 207  Q
    ||||||||||||||  |||||  ||||||||||| ||||  ||||||||||| ||||||||||||||| | ||| ||||  ||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaa 242366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 17780 - 17716
Alignment:
Q  115 ggtgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaattac 181  Q
    ||||||||||||||||  ||||||||| |||||||| |||   ||||||||||| ||||||||||||    
T  17780 ggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattac 17716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  117 tgtgtttggatggaaagtttaggaggggaagggatgggaatgtttacttttcatttttaaatta 180  Q
    ||||||||||||||  ||||||||||| |||||| ||||  ||||||| ||| |||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University