View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14132_low_8 (Length: 489)
Name: NF14132_low_8
Description: NF14132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14132_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 29063514 - 29063457
Alignment:
| Q |
362 |
aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcctcttt |
419 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
29063514 |
aactttgggactgattgcttgttcaaattacaatacagtaagaaatactttcctcttt |
29063457 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 29101450 - 29101397
Alignment:
| Q |
362 |
aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29101450 |
aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct |
29101397 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 29118368 - 29118311
Alignment:
| Q |
362 |
aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcctcttt |
419 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
29118368 |
aactttgggactgattgcttgttcaaattacaatacagtaagaaatactttcctcttt |
29118311 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 29121089 - 29121036
Alignment:
| Q |
362 |
aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct |
415 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29121089 |
aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct |
29121036 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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