View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14135_high_1 (Length: 234)
Name: NF14135_high_1
Description: NF14135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14135_high_1 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 18342573 - 18342696
Alignment:
| Q |
111 |
gtgagatctaatatatttaggactctatttcacttctattcaaatatatattcaaatagatttccttcctattcattccagtcctaaataatatatctat |
210 |
Q |
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| T |
18342573 |
gtgagatctaatatatttaggactctatttcacttctattcaaatatatattcaaatagatttccttcctattcattccagtcctaaataatatatctat |
18342672 |
T |
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| Q |
211 |
atcacgatctcgtattataatacc |
234 |
Q |
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| T |
18342673 |
atcacgatctcgtattataatacc |
18342696 |
T |
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