View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14136_high_2 (Length: 386)
Name: NF14136_high_2
Description: NF14136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14136_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 11 - 365
Target Start/End: Complemental strand, 43833574 - 43833229
Alignment:
| Q |
11 |
cataggtctataaattatatactttttattgtaataaattatacttaattttaatgacactaatgatataacaaatacaacacaaattaattcttatctc |
110 |
Q |
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| T |
43833574 |
cataggtctataaattatatactttttattgtaataaattatacttaattttaatgacaccaataatataataaatacaatataaattaattcttatctt |
43833475 |
T |
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| Q |
111 |
tttgaatgacatcaacaatatatctatgaaaaacttgttaaaggtataaattgaaagtaaaaaagtcacatccaaaaccatatattctctttatatgtag |
210 |
Q |
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| T |
43833474 |
tttgaatgacaccaacaatatatctatgaaaaacttgttaagggtataaattgaaagtaaaaaattcacatccaaaaccatatattctctttatatg--- |
43833378 |
T |
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| Q |
211 |
tatatatagataaagtcaagttcattttatttatcttaaaaagtcttacaataaaagttgttttaggcttttatgaatgacaaaccaactaatgatttta |
310 |
Q |
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| T |
43833377 |
------tagataaagtcaagttcattttatttatctttaaaagtcttacaataaaagttgttttaggcttttatgaatgagaaaccaactaatgatttta |
43833284 |
T |
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| Q |
311 |
aattggaaagagttagcgtcaatgtgatccactctctcatttatttttgataggt |
365 |
Q |
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| T |
43833283 |
aattggaaagagttagcgtcaatgtgatccactctctcatttatttttaataggt |
43833229 |
T |
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