View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14136_low_14 (Length: 243)
Name: NF14136_low_14
Description: NF14136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14136_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 37298386 - 37298160
Alignment:
| Q |
1 |
caaaatttactcgagtcaacattaaaaatattttatgactcgaatcacgtatatgaactttaagaattttttaacatgatcaattcctcctatccaagta |
100 |
Q |
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| T |
37298386 |
caaaatttactcgagtcaatattaaaaatattttatgactcgaatcacgtatatgaactttaagaattttttaacatgatcaattcctcctatccaagta |
37298287 |
T |
|
| Q |
101 |
ttttttcaaaccaaatttttataccatgactagagtcatgacccgagtcaagtcatctagnnnnnnnttcaacgcaaatttttgaagcatgactcgaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |
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| T |
37298286 |
-cttttcaaaccaaatttttataccatgactagagtcatgacccaagtcaagtcgtctagaaaaaaattcaacgcaaatttttgaagcatgactcgaatc |
37298188 |
T |
|
| Q |
201 |
aacataaaatgagttttaccatgatctt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
37298187 |
aacataaaatgagttttaccatgatctt |
37298160 |
T |
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