View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14138_high_36 (Length: 281)
Name: NF14138_high_36
Description: NF14138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14138_high_36 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 42930096 - 42929834
Alignment:
| Q |
1 |
tttaatattcaaaatatcattcaactatgtgaatgtgaagaatctctcagcgcaaagaaccaaatacgtaagcaaaagagggaaattaacatgaaaaata |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42930096 |
tttaatattcaaaatatcattcaactatgtgaatgtgaagaatctgtcagcgcaaagaaccaaatacgtaagcaaaagagggaaattaacatgaaaaata |
42929997 |
T |
|
| Q |
101 |
atgaaacaaaaaatgttactttatgatacactactactaatatttggtatacataattaaaatcattcccctcaaccttaaattaagtacttgaagacga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42929996 |
atgaaacaaaaaatgttactttatgatacactactactactatttggtatacataattaaaatcattcccctcaaccttaaattaagtacttgaagacga |
42929897 |
T |
|
| Q |
201 |
agatgaagttgaagcttgagtttgtgaagcttcaacttcatcttcacaatcaatctcctccct |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42929896 |
agatgaagttgaagcttgagtttgtgaagcttcaacttcatcttcacaatcaatctcctccct |
42929834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University