View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14138_high_56 (Length: 234)

Name: NF14138_high_56
Description: NF14138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14138_high_56
NF14138_high_56
[»] chr7 (43 HSPs)
chr7 (164-216)||(34333282-34333334)
chr7 (166-216)||(24438477-24438527)
chr7 (84-148)||(42841859-42841923)
chr7 (164-216)||(12218572-12218624)
chr7 (164-204)||(18485959-18485999)
chr7 (164-216)||(29993623-29993675)
chr7 (165-216)||(5239284-5239335)
chr7 (166-216)||(34606261-34606311)
chr7 (84-149)||(47408299-47408364)
chr7 (164-216)||(4628564-4628616)
chr7 (164-204)||(6097334-6097374)
chr7 (84-140)||(35112615-35112671)
chr7 (166-204)||(30703689-30703727)
chr7 (166-216)||(47118100-47118150)
chr7 (167-216)||(28587911-28587959)
chr7 (84-149)||(33258067-33258132)
chr7 (84-145)||(35746641-35746702)
chr7 (84-149)||(41888986-41889051)
chr7 (84-145)||(43874079-43874140)
chr7 (166-214)||(1736980-1737028)
chr7 (164-216)||(5729344-5729396)
chr7 (166-214)||(8754723-8754771)
chr7 (164-216)||(24798539-24798590)
chr7 (172-204)||(31320382-31320414)
chr7 (164-204)||(32805536-32805576)
chr7 (164-216)||(34546450-34546502)
chr7 (172-204)||(35791652-35791684)
chr7 (167-215)||(47656981-47657029)
chr7 (172-203)||(24438626-24438657)
chr7 (169-216)||(28262034-28262081)
chr7 (169-204)||(30924139-30924174)
chr7 (172-203)||(36786057-36786088)
chr7 (86-149)||(47459826-47459889)
chr7 (165-216)||(47839492-47839542)
chr7 (83-149)||(8380584-8380650)
chr7 (170-204)||(36785486-36785520)
chr7 (91-145)||(41675183-41675237)
chr7 (166-216)||(43594172-43594222)
chr7 (165-214)||(27456251-27456299)
chr7 (84-149)||(30866728-30866793)
chr7 (88-148)||(18194207-18194267)
chr7 (164-204)||(20402387-20402427)
chr7 (171-203)||(38128441-38128473)
[»] chr5 (49 HSPs)
chr5 (164-216)||(10054488-10054540)
chr5 (82-149)||(18437309-18437376)
chr5 (166-216)||(10069969-10070019)
chr5 (166-216)||(35504376-35504426)
chr5 (164-216)||(13661806-13661858)
chr5 (164-216)||(35132520-35132572)
chr5 (164-214)||(8787337-8787387)
chr5 (166-216)||(34650969-34651018)
chr5 (84-148)||(5842980-5843044)
chr5 (84-149)||(6008052-6008118)
chr5 (84-146)||(13461178-13461240)
chr5 (84-149)||(13703265-13703330)
chr5 (84-149)||(37809927-37809992)
chr5 (164-213)||(39069379-39069428)
chr5 (164-216)||(13470149-13470201)
chr5 (164-204)||(21945009-21945049)
chr5 (84-148)||(25027562-25027626)
chr5 (84-148)||(37633844-37633908)
chr5 (166-216)||(11958103-11958153)
chr5 (84-146)||(42911718-42911780)
chr5 (84-149)||(5143984-5144049)
chr5 (166-215)||(6283562-6283611)
chr5 (84-145)||(12784433-12784494)
chr5 (84-145)||(26906658-26906719)
chr5 (84-145)||(38297606-38297667)
chr5 (84-149)||(38308112-38308177)
chr5 (84-149)||(40208960-40209025)
chr5 (172-204)||(1919621-1919653)
chr5 (164-204)||(16972174-16972214)
chr5 (164-216)||(19647794-19647846)
chr5 (94-149)||(7579653-7579708)
chr5 (172-203)||(34650839-34650870)
chr5 (94-149)||(39073222-39073277)
chr5 (111-149)||(4427391-4427429)
chr5 (106-148)||(7404042-7404084)
chr5 (85-143)||(7466351-7466409)
chr5 (166-216)||(12506296-12506346)
chr5 (165-203)||(20983519-20983557)
chr5 (166-204)||(40608684-40608722)
chr5 (84-149)||(1795103-1795168)
chr5 (91-148)||(6754166-6754223)
chr5 (84-145)||(12722949-12723010)
chr5 (84-149)||(16124246-16124311)
chr5 (84-149)||(31803105-31803170)
chr5 (84-149)||(31803492-31803557)
chr5 (165-202)||(36897379-36897415)
chr5 (164-216)||(4837256-4837307)
chr5 (88-148)||(7734771-7734831)
chr5 (84-148)||(39893796-39893860)
[»] chr4 (59 HSPs)
chr4 (164-216)||(15186241-15186293)
chr4 (165-216)||(4268958-4269009)
chr4 (165-216)||(18068015-18068066)
chr4 (164-216)||(789666-789718)
chr4 (164-216)||(43202519-43202571)
chr4 (164-216)||(43944505-43944557)
chr4 (84-149)||(38027565-38027630)
chr4 (164-216)||(7768936-7768988)
chr4 (164-216)||(16536046-16536098)
chr4 (165-215)||(4089141-4089191)
chr4 (84-146)||(43888170-43888232)
chr4 (166-216)||(54897308-54897358)
chr4 (164-216)||(47232008-47232060)
chr4 (166-216)||(32217045-32217095)
chr4 (164-214)||(46688348-46688398)
chr4 (84-149)||(45725725-45725790)
chr4 (164-216)||(29591187-29591239)
chr4 (84-148)||(42629506-42629570)
chr4 (166-214)||(54054548-54054596)
chr4 (84-149)||(23719774-23719839)
chr4 (84-149)||(49089095-49089160)
chr4 (165-214)||(55882683-55882732)
chr4 (84-149)||(55935296-55935361)
chr4 (164-204)||(292112-292152)
chr4 (164-216)||(12356242-12356294)
chr4 (164-204)||(12701918-12701958)
chr4 (168-204)||(22225894-22225930)
chr4 (164-216)||(33108809-33108860)
chr4 (84-152)||(41415196-41415264)
chr4 (84-148)||(47596604-47596668)
chr4 (85-149)||(52257781-52257845)
chr4 (94-149)||(8735588-8735643)
chr4 (172-203)||(10426066-10426097)
chr4 (172-203)||(16536197-16536228)
chr4 (172-203)||(16821001-16821032)
chr4 (164-214)||(5091748-5091798)
chr4 (84-142)||(26933769-26933827)
chr4 (166-216)||(28755621-28755670)
chr4 (166-216)||(32202616-32202666)
chr4 (84-146)||(42133226-42133288)
chr4 (170-204)||(43012735-43012769)
chr4 (165-215)||(50167590-50167640)
chr4 (84-149)||(19093143-19093208)
chr4 (167-216)||(19503241-19503289)
chr4 (84-149)||(31861976-31862041)
chr4 (84-141)||(31984150-31984207)
chr4 (84-145)||(33809276-33809337)
chr4 (84-145)||(38542270-38542331)
chr4 (107-148)||(47428731-47428772)
chr4 (84-149)||(54231728-54231793)
chr4 (166-202)||(3783651-3783687)
chr4 (164-204)||(11893550-11893590)
chr4 (171-203)||(16572492-16572524)
chr4 (164-204)||(16572636-16572676)
chr4 (166-214)||(24679780-24679827)
chr4 (93-149)||(33751333-33751389)
chr4 (171-203)||(37402764-37402796)
chr4 (164-216)||(52533921-52533973)
chr4 (85-149)||(55703110-55703174)
[»] chr3 (43 HSPs)
chr3 (164-216)||(52520679-52520731)
chr3 (166-216)||(39074419-39074469)
chr3 (164-216)||(46352632-46352684)
chr3 (165-216)||(272219-272270)
chr3 (165-216)||(49893330-49893381)
chr3 (166-216)||(20923992-20924042)
chr3 (166-216)||(43786871-43786921)
chr3 (166-216)||(48725271-48725321)
chr3 (84-149)||(32853355-32853420)
chr3 (164-215)||(18014670-18014721)
chr3 (165-216)||(41304004-41304055)
chr3 (84-149)||(33874541-33874606)
chr3 (84-149)||(40010659-40010724)
chr3 (84-149)||(47104150-47104215)
chr3 (166-216)||(53489960-53490012)
chr3 (85-149)||(31610081-31610145)
chr3 (166-214)||(52246582-52246630)
chr3 (166-216)||(2362801-2362851)
chr3 (166-216)||(4168183-4168233)
chr3 (164-214)||(40362718-40362768)
chr3 (84-145)||(27039605-27039666)
chr3 (84-149)||(41351189-41351254)
chr3 (91-148)||(42515170-42515227)
chr3 (84-145)||(48214241-48214302)
chr3 (164-216)||(858587-858639)
chr3 (172-204)||(23516589-23516621)
chr3 (89-149)||(48152176-48152236)
chr3 (86-145)||(29458202-29458261)
chr3 (94-149)||(34266435-34266490)
chr3 (86-149)||(41425817-41425880)
chr3 (172-203)||(43787020-43787051)
chr3 (172-215)||(50395699-50395742)
chr3 (172-203)||(52520830-52520861)
chr3 (94-149)||(54106459-54106514)
chr3 (166-204)||(27994448-27994486)
chr3 (91-149)||(45145321-45145379)
chr3 (84-149)||(3643191-3643256)
chr3 (84-145)||(11473588-11473649)
chr3 (84-149)||(20848719-20848784)
chr3 (84-149)||(27028010-27028075)
chr3 (164-216)||(13159895-13159947)
chr3 (166-214)||(28139309-28139357)
chr3 (85-145)||(32980827-32980887)
[»] scaffold0003 (1 HSPs)
scaffold0003 (165-216)||(53821-53872)
[»] chr6 (43 HSPs)
chr6 (165-216)||(27433491-27433542)
chr6 (166-216)||(392096-392146)
chr6 (164-216)||(3515764-3515816)
chr6 (164-216)||(32929644-32929696)
chr6 (164-216)||(4215693-4215745)
chr6 (164-216)||(12525717-12525769)
chr6 (164-216)||(20897946-20897998)
chr6 (164-215)||(7851296-7851347)
chr6 (84-149)||(24949293-24949358)
chr6 (168-216)||(2350654-2350702)
chr6 (164-216)||(23402136-23402188)
chr6 (84-146)||(1249725-1249787)
chr6 (84-145)||(26485679-26485740)
chr6 (84-149)||(34379045-34379110)
chr6 (84-144)||(26470718-26470778)
chr6 (164-216)||(34396663-34396715)
chr6 (164-214)||(3026147-3026195)
chr6 (166-216)||(12145253-12145303)
chr6 (166-216)||(21878483-21878533)
chr6 (166-204)||(34712274-34712312)
chr6 (84-149)||(53817-53882)
chr6 (84-149)||(11676605-11676670)
chr6 (84-149)||(22050234-22050299)
chr6 (84-148)||(24356045-24356109)
chr6 (88-148)||(31244740-31244800)
chr6 (164-204)||(34706718-34706758)
chr6 (172-203)||(392245-392276)
chr6 (172-203)||(1604003-1604034)
chr6 (172-203)||(8701343-8701374)
chr6 (165-216)||(31280320-31280371)
chr6 (172-203)||(32929514-32929545)
chr6 (172-203)||(32985199-32985230)
chr6 (172-203)||(34706870-34706901)
chr6 (84-146)||(23777482-23777544)
chr6 (84-145)||(9838116-9838177)
chr6 (84-145)||(11129017-11129078)
chr6 (164-216)||(1391314-1391365)
chr6 (93-149)||(17251245-17251301)
chr6 (164-216)||(18276751-18276802)
chr6 (88-148)||(22784659-22784719)
chr6 (164-204)||(29716727-29716767)
chr6 (171-203)||(34712130-34712162)
chr6 (166-214)||(35043890-35043938)
[»] chr8 (63 HSPs)
chr8 (166-216)||(30675708-30675758)
chr8 (164-216)||(168464-168516)
chr8 (84-149)||(23855743-23855808)
chr8 (164-216)||(27988635-27988687)
chr8 (164-216)||(28045937-28045989)
chr8 (166-216)||(34228682-34228732)
chr8 (166-215)||(16394198-16394247)
chr8 (167-216)||(21595848-21595896)
chr8 (164-216)||(13643010-13643062)
chr8 (164-216)||(13743435-13743487)
chr8 (168-216)||(20831689-20831737)
chr8 (164-216)||(33357265-33357317)
chr8 (166-216)||(12652630-12652680)
chr8 (166-204)||(39751620-39751658)
chr8 (84-148)||(1245498-1245562)
chr8 (164-204)||(4537892-4537932)
chr8 (85-149)||(35296231-35296295)
chr8 (86-145)||(1739881-1739940)
chr8 (85-148)||(8672681-8672744)
chr8 (166-216)||(2805396-2805446)
chr8 (166-204)||(23722248-23722286)
chr8 (84-146)||(26740129-26740191)
chr8 (166-204)||(29566700-29566738)
chr8 (166-216)||(37373206-37373255)
chr8 (165-215)||(43119216-43119266)
chr8 (84-149)||(7483928-7483993)
chr8 (165-214)||(12203854-12203902)
chr8 (165-214)||(12448282-12448330)
chr8 (84-149)||(13174115-13174180)
chr8 (84-149)||(14061138-14061203)
chr8 (167-216)||(16888680-16888728)
chr8 (84-149)||(19972465-19972530)
chr8 (84-149)||(21020303-21020368)
chr8 (84-149)||(41643479-41643544)
chr8 (84-145)||(43641982-43642043)
chr8 (164-204)||(2490337-2490377)
chr8 (164-216)||(4648193-4648244)
chr8 (164-216)||(9063188-9063239)
chr8 (168-200)||(9254069-9254101)
chr8 (164-216)||(29444276-29444328)
chr8 (86-149)||(2888457-2888520)
chr8 (165-216)||(11112638-11112689)
chr8 (172-203)||(34228831-34228862)
chr8 (94-149)||(34982025-34982080)
chr8 (94-149)||(38482781-38482836)
chr8 (172-203)||(45185052-45185083)
chr8 (91-149)||(3720873-3720931)
chr8 (84-149)||(14511418-14511484)
chr8 (164-214)||(16785085-16785134)
chr8 (167-201)||(43714339-43714373)
chr8 (84-149)||(8453225-8453290)
chr8 (84-149)||(18842715-18842780)
chr8 (84-149)||(31964755-31964820)
chr8 (179-216)||(42035117-42035154)
chr8 (164-204)||(6254285-6254325)
chr8 (164-204)||(15450584-15450624)
chr8 (172-204)||(15451217-15451249)
chr8 (85-149)||(15596531-15596595)
chr8 (89-149)||(17074571-17074631)
chr8 (89-149)||(17573639-17573699)
chr8 (166-202)||(18955693-18955729)
chr8 (84-148)||(29091075-29091139)
chr8 (85-149)||(38221999-38222063)
[»] chr2 (48 HSPs)
chr2 (164-216)||(561654-561706)
chr2 (164-216)||(27856532-27856584)
chr2 (164-216)||(30486208-30486260)
chr2 (169-216)||(4381798-4381845)
chr2 (165-216)||(6580188-6580239)
chr2 (166-216)||(20552931-20552981)
chr2 (166-216)||(31438646-31438696)
chr2 (165-215)||(32361006-32361056)
chr2 (84-149)||(13215579-13215644)
chr2 (164-216)||(22068455-22068507)
chr2 (84-148)||(31024933-31024997)
chr2 (164-204)||(35851917-35851957)
chr2 (84-147)||(9706973-9707036)
chr2 (166-216)||(44587902-44587952)
chr2 (89-149)||(13849707-13849767)
chr2 (164-216)||(31390010-31390062)
chr2 (164-216)||(38591010-38591062)
chr2 (84-147)||(4952690-4952753)
chr2 (86-149)||(13965795-13965858)
chr2 (165-216)||(26891799-26891850)
chr2 (84-146)||(14541517-14541579)
chr2 (165-214)||(22887749-22887798)
chr2 (167-204)||(29771417-29771454)
chr2 (94-155)||(30264588-30264649)
chr2 (84-149)||(44360619-44360684)
chr2 (84-148)||(25186823-25186887)
chr2 (164-216)||(32860100-32860152)
chr2 (164-204)||(44854488-44854528)
chr2 (169-216)||(3668249-3668295)
chr2 (94-149)||(15893572-15893627)
chr2 (172-203)||(20553080-20553111)
chr2 (172-203)||(30486359-30486390)
chr2 (86-149)||(31011710-31011773)
chr2 (164-215)||(34442669-34442719)
chr2 (165-204)||(35470368-35470407)
chr2 (91-145)||(8443871-8443925)
chr2 (84-149)||(1395750-1395814)
chr2 (165-214)||(1859161-1859210)
chr2 (164-197)||(5431633-5431666)
chr2 (167-204)||(6983265-6983302)
chr2 (84-149)||(34262814-34262879)
chr2 (164-204)||(45261901-45261942)
chr2 (84-148)||(13754142-13754205)
chr2 (164-204)||(19037726-19037766)
chr2 (172-204)||(28277517-28277549)
chr2 (172-204)||(29293063-29293095)
chr2 (164-204)||(39865405-39865445)
chr2 (85-149)||(43077479-43077543)
[»] chr1 (69 HSPs)
chr1 (164-216)||(42770126-42770178)
chr1 (165-216)||(29210412-29210463)
chr1 (164-216)||(14350413-14350465)
chr1 (164-216)||(18043160-18043212)
chr1 (168-216)||(38702069-38702117)
chr1 (165-216)||(29657770-29657821)
chr1 (81-144)||(30702281-30702344)
chr1 (166-216)||(24178599-24178649)
chr1 (88-149)||(32168298-32168359)
chr1 (166-215)||(38162850-38162899)
chr1 (85-149)||(4100895-4100959)
chr1 (164-216)||(12072198-12072250)
chr1 (164-216)||(15227737-15227789)
chr1 (164-204)||(28726054-28726094)
chr1 (164-215)||(51065885-51065936)
chr1 (166-216)||(17333418-17333467)
chr1 (164-202)||(29683193-29683231)
chr1 (166-204)||(38595901-38595939)
chr1 (165-214)||(13961211-13961260)
chr1 (84-149)||(40926739-40926804)
chr1 (88-149)||(51613601-51613662)
chr1 (164-216)||(9266864-9266916)
chr1 (84-144)||(42800292-42800352)
chr1 (164-216)||(51368921-51368973)
chr1 (166-213)||(5694321-5694368)
chr1 (164-214)||(30657606-30657656)
chr1 (87-149)||(36318541-36318603)
chr1 (169-215)||(48383248-48383294)
chr1 (166-204)||(52702294-52702332)
chr1 (84-145)||(9127855-9127916)
chr1 (84-149)||(32348164-32348228)
chr1 (89-146)||(35605789-35605846)
chr1 (84-149)||(35700361-35700426)
chr1 (84-149)||(43809090-43809155)
chr1 (88-149)||(48174659-48174720)
chr1 (89-149)||(31487765-31487825)
chr1 (164-216)||(47009991-47010043)
chr1 (94-149)||(1024752-1024807)
chr1 (172-203)||(12072068-12072099)
chr1 (94-149)||(12231057-12231112)
chr1 (172-203)||(18043311-18043342)
chr1 (165-216)||(19031951-19032002)
chr1 (169-204)||(19940684-19940719)
chr1 (172-203)||(29210543-29210574)
chr1 (94-149)||(30686607-30686662)
chr1 (86-141)||(35255674-35255729)
chr1 (172-203)||(42769996-42770027)
chr1 (165-216)||(45431278-45431328)
chr1 (166-216)||(3784849-3784899)
chr1 (94-148)||(8464244-8464298)
chr1 (173-203)||(24178470-24178500)
chr1 (166-216)||(28481844-28481894)
chr1 (91-149)||(29830946-29831004)
chr1 (166-216)||(30294517-30294567)
chr1 (84-146)||(36850823-36850885)
chr1 (84-145)||(12721626-12721687)
chr1 (167-216)||(19011132-19011180)
chr1 (175-204)||(19940557-19940586)
chr1 (84-145)||(38597777-38597838)
chr1 (175-204)||(48282868-48282897)
chr1 (84-149)||(51974157-51974222)
chr1 (84-149)||(52649715-52649780)
chr1 (164-216)||(6770335-6770387)
chr1 (165-201)||(10679509-10679545)
chr1 (168-216)||(23473600-23473648)
chr1 (171-203)||(23822528-23822560)
chr1 (171-203)||(30664172-30664204)
chr1 (171-203)||(38595757-38595789)
chr1 (164-216)||(43286720-43286772)
[»] scaffold0264 (1 HSPs)
scaffold0264 (164-216)||(22959-23011)
[»] scaffold0014 (1 HSPs)
scaffold0014 (164-214)||(68428-68478)
[»] scaffold0188 (1 HSPs)
scaffold0188 (167-216)||(6246-6295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (164-216)||(116202-116254)
[»] scaffold0343 (1 HSPs)
scaffold0343 (84-146)||(7610-7672)
[»] scaffold0045 (1 HSPs)
scaffold0045 (166-216)||(50548-50598)
[»] scaffold0009 (1 HSPs)
scaffold0009 (84-149)||(147117-147182)
[»] scaffold0001 (1 HSPs)
scaffold0001 (84-141)||(419490-419547)
[»] scaffold2146 (1 HSPs)
scaffold2146 (89-149)||(743-803)
[»] scaffold0190 (1 HSPs)
scaffold0190 (166-202)||(14896-14932)
[»] scaffold0034 (1 HSPs)
scaffold0034 (164-216)||(95720-95772)
[»] scaffold0886 (1 HSPs)
scaffold0886 (84-149)||(4701-4765)
[»] scaffold0206 (1 HSPs)
scaffold0206 (165-216)||(11106-11155)
[»] scaffold0002 (1 HSPs)
scaffold0002 (164-216)||(147041-147093)


Alignment Details
Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 34333282 - 34333334
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34333282 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 34333334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 24438477 - 24438527
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaagg 24438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 42841923 - 42841859
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||||||| || |||| |||||||||||||||||| || ||||||||||||||||    
T  42841923 gtaacatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacgga 42841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 12218624 - 12218572
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  12218624 aagggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaagg 12218572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 18485959 - 18485999
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18485959 aagggaaatgctaaccggtgcccccggggcactggttaagg 18485999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 29993675 - 29993623
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||||||||||    
T  29993675 aagggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaagg 29993623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 5239284 - 5239335
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  5239284 agggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaagg 5239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 34606261 - 34606311
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaagg 34606311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 47408299 - 47408364
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| || |||||||||||||||||    
T  47408299 gtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 47408364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 4628564 - 4628616
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||| |||||| ||||||| |||||||| |||||||||||    
T  4628564 aagggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaagg 4628616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 6097334 - 6097374
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  6097334 aagggaaatgctaaccgatgcccccggggcactggttaagg 6097374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 35112615 - 35112671
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaa 140  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||| || ||||||||    
T  35112615 gtaatatttattgattgtatttgtttgtgtaaaatgtcaaaaagtgacaattaaaaa 35112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 30703689 - 30703727
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  30703689 gggaaatgttaaccggtgcccccggggcactggttaagg 30703727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 47118150 - 47118100
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||| |||||| |||||||||||||||| | |||||||||||    
T  47118150 gggaaatgctaactggtgcctccggggcactggttaaagatatgaaaaagg 47118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 28587911 - 28587959
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||    
T  28587911 ggaaatgctaaccggtgccccc-ggacactggttaaggatatgaaaaagg 28587959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 33258067 - 33258132
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||||||||||  ||| |||||||| ||||||| | || |||||||||||||||||    
T  33258067 gtaatatttattgattgtattgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 33258132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 35746702 - 35746641
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||||||| ||  |||||||||||| | ||||||| || |||||||||||||    
T  35746702 gtaacatttattgattgtcttaatttatgtaaaatgttaaaaagtgacaattaaaaaggaac 35746641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 41889051 - 41888986
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| || |||| |||||||| ||| ||||| |  |||||||||||||||||    
T  41889051 gtaacatttattgattgtcttggtttgtgtaaaatgtcacaaagtgataattaaaaaggaacggag 41888986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 43874140 - 43874079
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||||||||||  |||||||| ||||||||  || |||||||||||||    
T  43874140 gtaacatttattgaatgtatttgttcgtgtaaaatgtcaaaaagagaccattaaaaaggaac 43874079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 1736980 - 1737028
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||  | |||||||||||||||| |||||||||    
T  1736980 gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaa 1737028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 5729344 - 5729396
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| |||||||||  ||||| ||||||||||||| |||||||||||    
T  5729344 aagggaaatgttaaccggtgttcccggagcactggttaaggatatgaaaaagg 5729396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 8754771 - 8754723
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||||  || ||||||||||||| |||||||||    
T  8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaa 8754723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 24798590 - 24798539
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||    
T  24798590 aagggaaatgctaaccggtgccccc-gggcacttgttgaggatatgaaaaagg 24798539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 31320414 - 31320382
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||    
T  31320414 tgctaaccggtgcccccggggcactggttaagg 31320382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 32805536 - 32805576
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  32805536 aagggaaatgctaaccggtgttcccggggcactggttaagg 32805576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 34546502 - 34546450
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||| |||||||| || || |||||||| |||||||||||    
T  34546502 aagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaagg 34546450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 35791684 - 35791652
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||    
T  35791684 tgctaaccggtgcccccggggcactggttaagg 35791652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 47656981 - 47657029
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    ||||||||||||||||||  | |||||||||||||||| ||||||||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaag 47657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 24438657 - 24438626
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  24438657 tgctaaccggtgcccccggggcactggttaag 24438626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 28262034 - 28262081
Alignment:
Q  169 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||| ||||| ||| |||||||| |||||||||||    
T  28262034 aaatgctaaccggtgcctccgggtcaccggttaaggatatgaaaaagg 28262081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 30924174 - 30924139
Alignment:
Q  169 aaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||||||||||| ||||||||    
T  30924174 aaatgctaaccggtgcccccggggcacgggttaagg 30924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 36786088 - 36786057
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  36786088 tgctaaccggtgcccccggggcactggttaag 36786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 47459826 - 47459889
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| ||| ||  ||| |||||||||||||||| | || |||||||||||||||||    
T  47459826 aacatttattgaatgtcttgatttgtgtaaaatatcaaaaaataacaattaaaaaggaacggag 47459889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 47839492 - 47839542
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||| ||| |||| ||||||||||| |||||||||||    
T  47839492 agggaaatgctaaccggtgtccc-ggggtactggttaaggatatgaaaaagg 47839542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 8380650 - 8380584
Alignment:
Q  83 ggtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||||| ||| || |||| ||||||||||||||||   ||  ||||||||||||||||    
T  8380650 ggtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaatggacagttaaaaaggaacggag 8380584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 36785486 - 36785520
Alignment:
Q  170 aatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||| |||||||||||||||||||||||||||    
T  36785486 aatgctatccggtgcccccggggcactggttaagg 36785520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 41675237 - 41675183
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    ||||||||||| || ||||||||||||| |||||| || || |||||||||||||    
T  41675237 ttattgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaac 41675183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 43594222 - 43594172
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||| ||||||  |||||||||||| ||| |||||||    
T  43594222 gggaaatgctaaccggtgtccccggaacactggttaaggatataaaaaagg 43594172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 27456299 - 27456251
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||| ||||    
T  27456299 agggaaatgctaactggtgccccc-gggcactggttaaggatatggaaaa 27456251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 30866793 - 30866728
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||| ||||||| | ||  ||||||||||||||||    
T  30866793 gtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaaatgacagttaaaaaggaacggag 30866728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 18194267 - 18194207
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||| || |||| |||||||| | ||||| | || ||||||||||||||||    
T  18194267 catttattgattgtcttggtttgtgtaaaatttgaaaaactgacaattaaaaaggaacgga 18194207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 20402387 - 20402427
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||| ||||||| || |||||||||    
T  20402387 aagggaaatgctaaccggtgtccccgggacattggttaagg 20402427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 38128473 - 38128441
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||| |||||||||||||||||    
T  38128473 atgctaaccggtgcctccggggcactggttaag 38128441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 10054540 - 10054488
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10054540 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 10054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 18437376 - 18437309
Alignment:
Q  82 tggtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  18437376 tggtaacatttattgattgtattggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggag 18437309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 10069969 - 10070019
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 10070019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 35504426 - 35504376
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaagg 35504376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13661806 - 13661858
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  13661806 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaagg 13661858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 35132520 - 35132572
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  35132520 aagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaagg 35132572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 8787337 - 8787387
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  8787337 aagggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaa 8787387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 34651018 - 34650969
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34651018 gggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaagg 34650969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 5843044 - 5842980
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||||||| || ||||||||||||| ||||||||| |  ||||||||||||||||    
T  5843044 gtaacatttattgattgtcttggtttatgtaaaatgtcaaaaagtgataattaaaaaggaacgga 5842980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 6008052 - 6008118
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatc-aaaaagttacgattaaaaaggaacggag 149  Q
    |||||| |||||||||||||| |||| ||||||||||| ||||||| || |||||||||||||||||    
T  6008052 gtaacaattattgattgtattggtttgtgtaaaatatcaaaaaagtgacaattaaaaaggaacggag 6008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 13461178 - 13461240
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||||| |||||| |||| |||||||| ||||||||| || ||||||||||||||    
T  13461178 gtaacatttattgagtgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacg 13461240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 13703265 - 13703330
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||||||| ||  ||| |||||||||||||||||| || |||||||||||||||||    
T  13703265 gtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggag 13703330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 37809927 - 37809992
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| ||||| || |||| |||||||||||||||||| || ||||||||||| |||||    
T  37809927 gtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggatcggag 37809992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 39069379 - 39069428
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaa 213  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||    
T  39069379 aagggaaatgctaaccggtgcttccagggcactggttaagggtatgaaaa 39069428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13470149 - 13470201
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||   |||||||||||||||| |||||||||||    
T  13470149 aagggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaagg 13470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 21945049 - 21945009
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  21945049 aagggaaatgctaaccggtgcctccggggcactggttaagg 21945009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 25027626 - 25027562
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||||||| || ||||||||||||| ||| ||||| || ||||||||| ||||||    
T  25027626 gtaacatttattgattgtcttagtttatgtaaaatgtcacaaagtgacaattaaaaagaaacgga 25027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 37633844 - 37633908
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||| ||||| || |||| |||||||||||||||||| || ||||||||||| ||||    
T  37633844 gtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggatcgga 37633908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 11958153 - 11958103
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||| |||||| | ||| |||||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaagg 11958103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 42911718 - 42911780
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||| ||||||||||| || |||| ||||||||||||||| || || ||||||||||||||    
T  42911718 gtaacaattattgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacg 42911780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 5144049 - 5143984
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| ||  ||| |||||||||||||||| | ||| ||||||||||||||||    
T  5144049 gtaacatttattgagtgtcttaatttgtgtaaaatatcaaaaaataacggttaaaaaggaacggag 5143984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 6283562 - 6283611
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||| |||||||||| ||||| | ||||||||||    
T  6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaag 6283611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 12784494 - 12784433
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||||||| || |||| |||||||| ||||||||| |  |||||||||||||    
T  12784494 gtaacatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaac 12784433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 26906658 - 26906719
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||| ||||||||| ||| || |||| |||||||||||||||||| || |||||||||||||    
T  26906658 gtaagatttattgaatgttttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaac 26906719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 38297667 - 38297606
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||| ||||||||||||    
T  38297667 gtaacatttattgagtgtcttagtttgtgtaaaatgtcaaaaagtgacggttaaaaaggaac 38297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 38308177 - 38308112
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||  ||||||||||||||||    
T  38308177 gtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggag 38308112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 40209025 - 40208960
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||| ||| || ||||||||||||| ||||||| | ||| ||||||||||||||||    
T  40209025 gtaatatttattgagtgtcttagtttatgtaaaatgtcaaaaactgacggttaaaaaggaacggag 40208960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 1919653 - 1919621
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||    
T  1919653 tgctaaccggtgcccccggggcactggttaagg 1919621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 16972174 - 16972214
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  16972174 aagggaaatgctaaccgatgcccccggagcactggttaagg 16972214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 19647846 - 19647794
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| ||||||||||||||  | |||||||||||||||||| |||||||||||    
T  19647846 aaggaaaatgctaaccggtatctccggggcactggttaaggatatgaaaaagg 19647794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 7579708 - 7579653
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  7579708 ttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 7579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 34650839 - 34650870
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  34650839 tgctaaccggtgcccccggggcactggttaag 34650870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 39073222 - 39073277
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  39073222 ttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 39073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 4427429 - 4427391
Alignment:
Q  111 tgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| || |||||||||||||||||    
T  4427429 tgtaaaatatcaaaaagtgacaattaaaaaggaacggag 4427391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 7404042 - 7404084
Alignment:
Q  106 gtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||||||||| || || ||||||||||||||||    
T  7404042 gtttatgtaaaatatcaaaatgtgacaattaaaaaggaacgga 7404084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 7466351 - 7466409
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaagga 143  Q
    ||||||||||| ||||| ||  |||||||||||||||||||| | || |||||||||||    
T  7466351 taacatttattaattgtcttgatttatgtaaaatatcaaaaaataacaattaaaaagga 7466409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 12506296 - 12506346
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| | || ||||| |||||| ||||||||||||    
T  12506296 gggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaagg 12506346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 20983519 - 20983557
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaag 203  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  20983519 agggtaatgctaaccggtgcccccggggcactggataag 20983557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 40608722 - 40608684
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  40608722 gggaaatgctaaccggtgctcccgggacactggttaagg 40608684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 1795168 - 1795103
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| ||  ||| |||||||| ||||||||| ||  ||||||||||||||||    
T  1795168 gtaacatttattgagtgtcttgatttgtgtaaaatgtcaaaaagtaaccgttaaaaaggaacggag 1795103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 6754223 - 6754166
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    ||||||||||| || |||| |||||||| |||||| || || ||||||||||||||||    
T  6754223 ttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 6754166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 12723010 - 12722949
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||| ||||||||||||| || |||| |||||||| ||||||||| |  |||||||||||||    
T  12723010 gtaatatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaac 12722949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 16124311 - 16124246
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| | ||||| | |||| ||||||||||||| |||||| || || |||||||||||||||||    
T  16124311 gtaacaatcattgactatattggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 16124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 31803105 - 31803170
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||| ||||| || || | ||||||||||||||| || || |||||||||||||||||    
T  31803105 gtaatatttatttattgtcttggtatgtgtaaaatatcaaaaggtgacaattaaaaaggaacggag 31803170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 31803492 - 31803557
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| ||||| ||  ||| |||||||| ||||||||| || |||||||| ||||||||    
T  31803492 gtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggag 31803557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 36897415 - 36897379
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaa 202  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36897415 agggaaatgctaaccggtg-ccccggggcactggttaa 36897379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 4837256 - 4837307
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||| ||||||||||| |||||||  |||||||||||    
T  4837256 aagggaaatgttaaccggtg-ccccggggcaccggttaagaatatgaaaaagg 4837307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 7734831 - 7734771
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||| ||  |||||||||||| | ||||| | || ||||||||||||||||    
T  7734831 catttattgattgtcttgatttatgtaaaatttgaaaaaatgacaattaaaaaggaacgga 7734771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 39893860 - 39893796
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||| ||||||||| | || |||| |||||||| | ||||||| || ||||||||||||||||    
T  39893860 gtaacacttattgattattttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacgga 39893796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 15186241 - 15186293
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15186241 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 15186293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 4269009 - 4268958
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4269009 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 4268958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 18068066 - 18068015
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18068066 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 18068015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 789718 - 789666
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  789718 aagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaagg 789666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 43202571 - 43202519
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43202571 aagggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaagg 43202519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 43944505 - 43944557
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43944505 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaagg 43944557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 38027630 - 38027565
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || ||||||||||||||||||||||| || |||||||||||||||||    
T  38027630 gtaacatttattgagtgttttggtttatgtaaaatatcaaaaagtgacaattaaaaaggaacggag 38027565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 7768936 - 7768988
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  7768936 aagggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaagg 7768988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 16536046 - 16536098
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  16536046 aagggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaagg 16536098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 4089141 - 4089191
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  4089141 agggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaag 4089191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 43888170 - 43888232
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||||||| | || ||||||||||||||||||||||| || ||||||||||||||    
T  43888170 gtaacatttattgattctcttggtttatgtaaaatatcaaaaagtgacaattaaaaaggaacg 43888232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 54897308 - 54897358
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaagg 54897358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 47232060 - 47232008
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  47232060 aagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaagg 47232008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 32217045 - 32217095
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaagg 32217095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 46688398 - 46688348
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  46688398 aagggaaatgctaactggtgcccccgaggcactggttaaggatatgaaaaa 46688348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 45725725 - 45725790
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| | ||||||||| |||||||| ||||||| | || |||||||||||||||||    
T  45725725 gtaacatttattgactttatttgtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 45725790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 29591187 - 29591239
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||| ||||    
T  29591187 aagggaaatgctaactggtgcccccggggcactggttaagaatatgaataagg 29591239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 42629506 - 42629570
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||||||| || |||| |||||||||||||||| | || |||||||| |||||||    
T  42629506 gtaacatttattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaacgaacgga 42629570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 54054548 - 54054596
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaa 54054596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 23719839 - 23719774
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||| ||| || ||||||||||||| ||||||| | || |||||||||||||||||    
T  23719839 gtaatatttattgaatgtcttagtttatgtaaaatgtcaaaaaataacaattaaaaaggaacggag 23719774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 49089095 - 49089160
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||||||| || |||   ||||||||||||||||| || |||||||||||||||||    
T  49089095 gtaatatttattgattgtcttggttcgagtaaaatatcaaaaagtgacaattaaaaaggaacggag 49089160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 55882683 - 55882732
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  55882683 agggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa 55882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 55935296 - 55935361
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| ||  ||| |||||||||||||||||| ||  ||||||||||||||||    
T  55935296 gtaacatttattgagtgtcttgatttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggag 55935361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 292112 - 292152
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  292112 aagggaaatgctaaccggtgccccgggggcaccggttaagg 292152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 12356242 - 12356294
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||| | |  ||||||||||| |||||||||||    
T  12356242 aagggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaagg 12356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 12701958 - 12701918
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  12701958 aagggaaatgttaactggtgcccccggggcactggttaagg 12701918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 22225930 - 22225894
Alignment:
Q  168 gaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22225930 gaaatgctaaccggtgcccccgggacactggttaagg 22225894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 33108860 - 33108809
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||||||||||    
T  33108860 aagggaaatgttaaccggtgcctccggggcactggttaa-gatatgaaaaagg 33108809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 41415196 - 41415264
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggagcag 152  Q
    |||||||||||||| ||| ||  ||| |||||||||| ||||||| ||  |||||||||||||||||||    
T  41415196 gtaacatttattgagtgtcttaatttgtgtaaaatattaaaaagtaaccgttaaaaaggaacggagcag 41415264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 47596668 - 47596604
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||| | |||| |||| |||||||| ||||||| | || ||||||||||||||||    
T  47596668 gtaacatttattgactttattggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacgga 47596604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 52257845 - 52257781
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| ||| || ||||||||||||| ||||||||| ||  |||||||| |||||||    
T  52257845 taacatttattgagtgtcttagtttatgtaaaatgtcaaaaagtgacagttaaaaagaaacggag 52257781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 8735588 - 8735643
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  8735588 ttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 8735643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 10426097 - 10426066
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  10426097 tgctaaccggtgcccccggggcactggttaag 10426066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 16536228 - 16536197
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  16536228 tgctaaccggtgcccccggggcactggttaag 16536197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 16821032 - 16821001
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  16821032 tgctaaccggtgcccccggggcactggttaag 16821001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 5091798 - 5091748
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||| ||||||||| | ||||||||||||||||||  |||||||||    
T  5091798 aagggaaatactaaccggtactcccggggcactggttaagaatatgaaaaa 5091748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 26933827 - 26933769
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaagg 142  Q
    |||||||||||||||||| || |||| |||||||| ||| ||||| ||| |||||||||    
T  26933827 gtaacatttattgattgttttggtttgtgtaaaatgtcacaaagtgacggttaaaaagg 26933769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 28755621 - 28755670
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||||||||    
T  28755621 gggaaatgctaaccggtgtcccaggg-cactggttaaggatatgaaaaagg 28755670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 32202666 - 32202616
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||| ||||||||| ||||||||||| |||||||| ||| |||||||    
T  32202666 gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaagg 32202616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 42133226 - 42133288
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||||||||| || |||| ||||||||||  |||||| || ||||||||| ||||    
T  42133226 gtaacatttattgattgttttggtttgtgtaaaatattgaaaagtgacaattaaaaagaaacg 42133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 43012735 - 43012769
Alignment:
Q  170 aatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||||||||||||| |||||    
T  43012735 aatgctaaccggtgcccccggggcactggataagg 43012769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 50167590 - 50167640
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||  | ||||||||||||||| | ||||||||||    
T  50167590 agggaaatgctaaccggtgttctcggggcactggttaaagatatgaaaaag 50167640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 19093208 - 19093143
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||| | | || ||||||||||||| |||||| || || |||||||||||||||||    
T  19093208 gtaacaattattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 19093143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 19503289 - 19503241
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||||||||||    
T  19503289 ggaaatgctaaccggtgctccc-gggtactggttaaggatatgaaaaagg 19503241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 31862041 - 31861976
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||| | || |||| |||||||| ||||||| | || |||||||||||||||||    
T  31862041 gtaacaattattgattatcttagtttgtgtaaaatttcaaaaaataacaattaaaaaggaacggag 31861976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 31984207 - 31984150
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaag 141  Q
    |||||| ||||||||||| || |||| |||||||| ||||||||| || |||||||||    
T  31984207 gtaacaattattgattgtgttggtttgtgtaaaatgtcaaaaagtgacaattaaaaag 31984150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 33809276 - 33809337
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||||||| ||  ||| |||||||| | ||||||| || |||||||||||||    
T  33809276 gtaacatttattgattgttttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaac 33809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 38542331 - 38542270
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||| ||||| ||||| || ||||||||||||| ||||||| | || |||||||||||||    
T  38542331 gtaacaattattaattgtcttggtttatgtaaaatgtcaaaaaatgacaattaaaaaggaac 38542270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 47428731 - 47428772
Alignment:
Q  107 tttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    ||||||||||||||||||| || || ||||||||||||||||    
T  47428731 tttatgtaaaatatcaaaatgtgacaattaaaaaggaacgga 47428772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 54231728 - 54231793
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||||| ||  ||| |||||||| ||||||| | || |||||||||||||||||    
T  54231728 gtaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 54231793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 3783687 - 3783651
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaa 202  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  3783687 gggaaatgctaaccggtgcctccggggcaccggttaa 3783651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 11893590 - 11893550
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||| ||||||||| |||||||| ||||||    
T  11893590 aagggaaatgctaacaggtgcccccagggcactgtttaagg 11893550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 16572492 - 16572524
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||| |||||    
T  16572492 atgctaaccggtgcccccggggcactgattaag 16572524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 16572676 - 16572636
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||| ||||||||||||||||| ||| ||||||||||||||    
T  16572676 aaggaaaatgctaaccggtgcctccgaggcactggttaagg 16572636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 24679827 - 24679780
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||| | | |||||||||||||||| |||||||||    
T  24679827 gggaaatgctaaccggtgtctc-ggggcactggttaaggatatgaaaaa 24679780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 33751389 - 33751333
Alignment:
Q  93 attgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||| || |||| |||||||| |||||| || || |||||||||||||||||    
T  33751389 attgattgtcttagtttgtgtaaaatgtcaaaatgtaacaattaaaaaggaacggag 33751333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 37402764 - 37402796
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    |||||||||||||||| ||||||||||||||||    
T  37402764 atgctaaccggtgccctcggggcactggttaag 37402796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 52533973 - 52533921
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||||| || || |||||||||||  |||||||||||    
T  52533973 aagggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaagg 52533921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 55703110 - 55703174
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||| ||||||||||| || || |||||||||| ||||||  | || |||||||||||||||||    
T  55703110 taacaattattgattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaaggaacggag 55703174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 52520679 - 52520731
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52520679 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 52520731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 39074419 - 39074469
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 39074469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 46352632 - 46352684
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46352632 aagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 46352684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 272219 - 272270
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  272219 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 49893330 - 49893381
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49893330 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 49893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 20923992 - 20924042
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  20923992 gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaagg 20924042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 43786871 - 43786921
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaagg 43786921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 48725271 - 48725321
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaagg 48725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 32853420 - 32853355
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| || |||| |||||||| |||||||||||| |||||||||||| ||||    
T  32853420 gtaacatttattgattgtcttagtttgtgtaaaatgtcaaaaagttacaattaaaaaggaatggag 32853355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 18014670 - 18014721
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  18014670 aagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaag 18014721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 41304004 - 41304055
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaagg 41304055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 33874606 - 33874541
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| || |||| |||||||| ||||||| | || |||||||||||||||||    
T  33874606 gtaacatttattgattgttttggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggag 33874541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 40010724 - 40010659
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||||||||||||| ||  ||||||||||||||||    
T  40010724 gtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaagtaacacttaaaaaggaacggag 40010659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 47104215 - 47104150
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| ||  |||||||||||| |||||||||  | |||||||||||||||||    
T  47104215 gtaacatttattgattgttttgatttatgtaaaatgtcaaaaagtggcaattaaaaaggaacggag 47104150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 53490012 - 53489960
Alignment:
Q  166 gggaaatgctaaccggtgccccc--ggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  53490012 gggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaagg 53489960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 31610145 - 31610081
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||||||| ||  |||||||||||||||||||||| || |||| ||| ||||||||    
T  31610145 taacatttattgattgtcttgatttatgtaaaatatcaaaaagtgacaattataaaagaacggag 31610081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 52246582 - 52246630
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaa 52246630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 2362801 - 2362851
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||| ||||| ||| ||||||||| |||||||||||    
T  2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaagg 2362851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 4168183 - 4168233
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| |||||| ||||||||||| ||| |||||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaagg 4168233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 40362768 - 40362718
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  40362768 aagggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaa 40362718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 27039666 - 27039605
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||| ||||||||||||    
T  27039666 gtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacggttaaaaaggaac 27039605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 41351254 - 41351189
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| ||||| ||| ||  |||||||||||||||| ||||| || |||||||||||||||||    
T  41351254 gtaacattaattgaatgtcttgatttatgtaaaatatcagaaagtgacaattaaaaaggaacggag 41351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 42515227 - 42515170
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    ||||||||||| || |||| |||||||| | |||||||||| ||||||||||||||||    
T  42515227 ttattgattgtcttggtttgtgtaaaatgttaaaaagttacaattaaaaaggaacgga 42515170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 48214241 - 48214302
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||| |||||||||||||||| || | |||||||| ||||||||| || |||||||||||||    
T  48214241 gtaatatttattgattgtattggtgtgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 48214302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 858587 - 858639
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||| ||||||||||||| | ||||| ||||||| |||||||||||    
T  858587 aagggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaagg 858639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 23516621 - 23516589
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||    
T  23516621 tgctaaccggtgcccccggggcactggttaagg 23516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 48152176 - 48152236
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||||||  ||| |||||||||| ||||| | || |||||||||||||||||    
T  48152176 atttattgattgtattgatttgtgtaaaatataaaaaaatgacaattaaaaaggaacggag 48152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 29458261 - 29458202
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||||| || |||| |||||||| |||||| || ||||||||||| ||||    
T  29458261 aacatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaatgaac 29458202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 34266490 - 34266435
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| |||||||| |||||| || ||||||||||||||||||||    
T  34266490 ttgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaaggaacggag 34266435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 41425817 - 41425880
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||| || |||| |||||||| | |||| || || |||||||||||||||||    
T  41425817 aacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 41425880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 43787051 - 43787020
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  43787051 tgctaaccggtgcccccggggcactggttaag 43787020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 50395742 - 50395699
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||| ||||||||| || ||||||||||    
T  50395742 tgctaaccggtgcccccgggacactggttagggatatgaaaaag 50395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 52520861 - 52520830
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  52520861 tgctaaccggtgcccccggggcactggttaag 52520830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 54106459 - 54106514
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || ||||||||||||| |||||| || || |||||||||||||||||    
T  54106459 ttgattgtcttggtttatgtaaaatgtcaaaatgtaacaattaaaaaggaacggag 54106514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 27994486 - 27994448
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  27994486 gggaaatgttaaccgatgcccccggggcactggttaagg 27994448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 45145321 - 45145379
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||| || |||| |||||||||||||||| | || |||||||||||| ||||    
T  45145321 ttattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaaggaaaggag 45145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 3643256 - 3643191
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||| |||||||||||  ||| |||||||| ||||||||| ||  ||||||||||| ||||    
T  3643256 gtaacatttcttgattgtattgatttgtgtaaaatgtcaaaaagtgacacttaaaaaggaatggag 3643191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 11473588 - 11473649
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||  || |||||||||||||    
T  11473588 gtaacatttattgaatgtcttagtttgtgtaaaatgtcaaaaagcgacaattaaaaaggaac 11473649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 20848784 - 20848719
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||| | || |||| |||||||| |||||| || ||  ||||||||||||||||    
T  20848784 gtaacatttattgattattttggtttgtgtaaaatgtcaaaatgtgacagttaaaaaggaacggag 20848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 27028075 - 27028010
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| | |||||| || | |||||||| ||||||| | ||| ||||||||||||||||    
T  27028075 gtaacatttatttaatgtattggtatgtgtaaaatgtcaaaaaatgacggttaaaaaggaacggag 27028010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13159895 - 13159947
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||| || ||||  || ||||||| |||||||||||    
T  13159895 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaagg 13159947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 28139309 - 28139357
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||| |||||||||  | |||||||||||| |||||||||    
T  28139309 gggaaatgctaactggtgcccccaagacactggttaaggatatgaaaaa 28139357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 32980827 - 32980887
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    ||||| ||||||||||| || |||| |||||||| |||||| || || |||||||||||||    
T  32980827 taacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 32980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 53872 - 53821
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53872 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 53821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 27433491 - 27433542
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27433491 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 27433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 392096 - 392146
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 392146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 3515764 - 3515816
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3515764 aagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaagg 3515816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 32929696 - 32929644
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32929696 aagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaagg 32929644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 4215693 - 4215745
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  4215693 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaagg 4215745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 12525717 - 12525769
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  12525717 aagggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaagg 12525769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 20897946 - 20897998
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20897946 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagg 20897998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 7851347 - 7851296
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaag 7851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 24949293 - 24949358
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| || |||| |||||||||||||||| | || |||||||||||||||||    
T  24949293 gtaacatttattgattgttttggtttgtgtaaaatatcaaaaaataacaattaaaaaggaacggag 24949358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 2350654 - 2350702
Alignment:
Q  168 gaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaagg 2350702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 23402136 - 23402188
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  23402136 aagggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaagg 23402188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 1249725 - 1249787
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||||||||| || |||||| |||||||||| ||||| || ||||||||||||||    
T  1249725 gtaacatttattgattgtcttagtttatataaaatatcataaagtgacaattaaaaaggaacg 1249787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 26485740 - 26485679
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||| || ||||||||||||| ||||||||| || |||||||||||||    
T  26485740 gtaacatttattgaatgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaac 26485679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 34379045 - 34379110
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||||||||||||| ||  ||||||||||||||||    
T  34379045 gtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggag 34379110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 26470778 - 26470718
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaa 144  Q
    |||||| ||||||||||| || ||||||||||||| ||||||||| || ||||||||||||    
T  26470778 gtaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaa 26470718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 34396715 - 34396663
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||| || ||| |||||||| |||||||||||    
T  34396715 aagggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaagg 34396663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 3026195 - 3026147
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  3026195 aagggaaatgctaactggtgcccc--gggcactggttaagggtatgaaaaa 3026147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 12145303 - 12145253
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||||||||||    
T  12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaagg 12145253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 21878533 - 21878483
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| || |||||| |||||||| |||||||||||    
T  21878533 gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaagg 21878483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 34712312 - 34712274
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34712312 gggaaatgctaaccggtgcctccggggcactggttaagg 34712274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 53817 - 53882
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||||| || || ||||||||||||||||| || || ||||||||| |||||||    
T  53817 gtaacaattattgattgtcttggtatatgtaaaatatcaaaatgtgacaattaaaaagaaacggag 53882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 11676670 - 11676605
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||||||| || |||| |||||||||||||||||| || |||||||| ||| ||||    
T  11676670 gtaatatttattgattgtcttggtttgtgtaaaatatcaaaaagtaacaattaaaaatgaatggag 11676605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 22050234 - 22050299
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||||| || |||| |||||||| |||||| || || |||||||||||||||||    
T  22050234 gtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 22050299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 24356109 - 24356045
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||||||| || ||||   |||||||||||||||| || ||||||||| ||||||    
T  24356109 gtaacatttattgattgttttggtttggataaaatatcaaaaagtgacaattaaaaagaaacgga 24356045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 31244800 - 31244740
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||| || |||| ||||||| ||||||| || || ||||||||||||||||    
T  31244800 catttattgattgtcttggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacgga 31244740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 34706718 - 34706758
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  34706718 aagggaaatgctaaccggtgccccgggggcaccggttaagg 34706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 392276 - 392245
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  392276 tgctaaccggtgcccccggggcactggttaag 392245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 1604003 - 1604034
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  1604003 tgctaaccggtgcccccggggcactggttaag 1604034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 8701374 - 8701343
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  8701374 tgctaaccggtgcccccggggcactggttaag 8701343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 31280320 - 31280371
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| |||| ||||||| ||||| | ||||||||||    
T  31280320 agggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaagg 31280371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 32929514 - 32929545
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  32929514 tgctaaccggtgcccccggggcactggttaag 32929545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 32985199 - 32985230
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  32985199 tgctaaccggtgcccccggggcactggttaag 32985230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 34706901 - 34706870
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  34706901 tgctaaccggtgcccccggggcactggttaag 34706870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 23777482 - 23777544
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||| | ||| || |||| |||||||| ||||||||| || ||||||||||||||    
T  23777482 gtaacatttatttaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacg 23777544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 9838177 - 9838116
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||||||| ||  ||| |||||||||||| ||| | || |||||||||||||    
T  9838177 gtaacatttattgattgttttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaac 9838116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 11129017 - 11129078
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||| ||||| ||  ||| |||||||| ||||||||| || |||||||||||||    
T  11129017 gtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 11129078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 1391365 - 1391314
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| | |||||| |||| |||||| |||||||||||    
T  1391365 aagggaaatgctaaccggtg-ctccggggtactgattaaggatatgaaaaagg 1391314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 17251301 - 17251245
Alignment:
Q  93 attgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||| || |||| |||||||| | ||||||| || |||||||||||||||||    
T  17251301 attgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggag 17251245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 18276802 - 18276751
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| |||| |||||||| ||| |||||||||||| |||||||||||    
T  18276802 aagggaaatgttaactggtgcccctggg-cactggttaaggatatgaaaaagg 18276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 22784719 - 22784659
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||| | | || ||||||||||||| | ||||||| || ||||||||||||||||    
T  22784719 catttattgaatatcttggtttatgtaaaatgttaaaaagtgacaattaaaaaggaacgga 22784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 29716727 - 29716767
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  29716727 aagggaaatgttaactagtgcccccggggcactggttaagg 29716767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 34712130 - 34712162
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    |||||||||||||||||||||||||| ||||||    
T  34712130 atgctaaccggtgcccccggggcactagttaag 34712162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 35043890 - 35043938
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||| |||| || |||| |||||||||||| |||||||||    
T  35043890 gggaaatgctaactggtgtccacgggacactggttaaggatatgaaaaa 35043938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 30675758 - 30675708
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 30675708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 168464 - 168516
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  168464 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaagg 168516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 23855743 - 23855808
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| |||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||    
T  23855743 gtaatatttattgattgtattggtttatgtaaaatgtcaaaaaatgacgattaaaaaggaacggag 23855808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 27988687 - 27988635
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  27988687 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaagg 27988635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 28045989 - 28045937
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  28045989 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaagg 28045937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 34228682 - 34228732
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaagg 34228732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 16394247 - 16394198
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaag 16394198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 21595848 - 21595896
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21595848 ggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaagg 21595896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13643010 - 13643062
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  13643010 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaagg 13643062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13743435 - 13743487
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  13743435 aaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaagg 13743487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 20831737 - 20831689
Alignment:
Q  168 gaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaagg 20831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 33357317 - 33357265
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  33357317 aagggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaagg 33357265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 12652630 - 12652680
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaagg 12652680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 39751658 - 39751620
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaagg 39751620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 1245498 - 1245562
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||| ||||||||||| ||  |||||||||||| ||||||||| || ||||||||||||||||    
T  1245498 gtaacaattattgattgtcttgatttatgtaaaatgtcaaaaagtgacaattaaaaaggaacgga 1245562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 4537932 - 4537892
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  4537932 aagggaaatgctaaccggtgcctccggggcactggttaagg 4537892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 35296231 - 35296295
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| ||| || |||| |||||||||||||||||| ||  ||||||||||||||||    
T  35296231 taacatttattgagtgtcttggtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggag 35296295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 1739881 - 1739940
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||||| ||  |||||||||||| ||||||||| || |||||||||||||    
T  1739881 aacatttattgattgtgttgatttatgtaaaatgtcaaaaagtgacaattaaaaaggaac 1739940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 8672681 - 8672744
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    ||||||||||||||| | || |||| |||||||||||||||| | || ||||||||||||||||    
T  8672681 taacatttattgattattttggtttgtgtaaaatatcaaaaaatgacaattaaaaaggaacgga 8672744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 2805446 - 2805396
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||| ||||| ||||||||||| |||||||||||| |||||||||||    
T  2805446 gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaagg 2805396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 23722248 - 23722286
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  23722248 gggaaatgttaaccggtgcccccggggcactggttaagg 23722286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 26740191 - 26740129
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||| ||||||||||| || |||| |||||||| ||||||||| || ||||||||||||||    
T  26740191 gtaacacttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacg 26740129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 29566700 - 29566738
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  29566700 gggaaatgctaaccggtgcccccggggcacgggttaagg 29566738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 37373206 - 37373255
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  37373206 gggaaatgctaaccggtgccccc-ggacactggttaaggatatgaaaaagg 37373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 43119216 - 43119266
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||||| |||||||||| |||| | ||||||||||    
T  43119216 agggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaag 43119266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 7483928 - 7483993
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| | ||| || |||| |||||||||||||||||| ||  ||||||||||||||||    
T  7483928 gtaacatttatttagtgtcttagtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggag 7483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 12203854 - 12203902
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  12203854 agggaaatgctaaccggtgccccc-gggtaccggttaagggtatgaaaaa 12203902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 12448282 - 12448330
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  12448282 agggaaatgctaaccggtgccccc-gggtaccggttaagggtatgaaaaa 12448330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 13174115 - 13174180
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||  ||||||||||||||||    
T  13174115 gtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaagtgacagttaaaaaggaacggag 13174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 14061203 - 14061138
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||||||| || |||| |||||||| | ||||||| || |||||||||||||||||    
T  14061203 gtaatatttattgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggag 14061138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 16888728 - 16888680
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16888728 ggaaatgctaaccggtgccccc-gggcacaggttaaggatatgaaaaagg 16888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 19972465 - 19972530
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||  ||||||||||||||||    
T  19972465 gtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggag 19972530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 21020368 - 21020303
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||  ||||||||||||||||    
T  21020368 gtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggag 21020303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 41643544 - 41643479
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| | |||| |||| |||||||| ||||||| |||| |||||||| ||||||||    
T  41643544 gtaacatttattgactttattggtttgtgtaaaatgtcaaaaaattacaattaaaaatgaacggag 41643479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 43642043 - 43641982
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||| ||||||||||| || |||| |||||||| ||||||||| || |||||||||||||    
T  43642043 gtaacaattattgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 43641982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 2490377 - 2490337
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  2490377 aagggaaatgctaaccggtgcctccggggcacaggttaagg 2490337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 4648193 - 4648244
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  4648193 aagggaaatgctaaccggtgtccc-ggggcactgattaaggatatgaaaaagg 4648244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 9063239 - 9063188
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| ||| || ||||||||||||| |||||||||||    
T  9063239 aagggaaatgctaaccggtgtccc-ggagcactggttaaggatatgaaaaagg 9063188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 9254101 - 9254069
Alignment:
Q  168 gaaatgctaaccggtgcccccggggcactggtt 200  Q
    |||||||||||||||||||||||||||||||||    
T  9254101 gaaatgctaaccggtgcccccggggcactggtt 9254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 29444328 - 29444276
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| ||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  29444328 aaggaaaatgttaaccggtgctcccggggcactgattaaggatatgaaaaagg 29444276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 2888520 - 2888457
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||| || |||| |||||||| | |||| || || |||||||||||||||||    
T  2888520 aacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 2888457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 11112638 - 11112689
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||| |||||  ||||| |||||||||||| |||||||||||    
T  11112638 agggaaatgctaactggtgcatccgggacactggttaaggatatgaaaaagg 11112689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 34228862 - 34228831
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  34228862 tgctaaccggtgcccccggggcactggttaag 34228831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 34982025 - 34982080
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  34982025 ttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 34982080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 38482836 - 38482781
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  38482836 ttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 38482781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 45185083 - 45185052
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  45185083 tgctaaccggtgcccccggggcactggttaag 45185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 3720873 - 3720931
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||| || |||| |||||||| | ||||||| || |||||||||||||||||    
T  3720873 ttattgattgttttagtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggag 3720931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 14511484 - 14511418
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgatt-aaaaaggaacggag 149  Q
    |||||||||||| ||||| || |||| |||||||| ||||||||| || ||| ||||||||||||||    
T  14511484 gtaacatttattaattgtcttggtttgtgtaaaatttcaaaaagtgacaattaaaaaaggaacggag 14511418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 16785085 - 16785134
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||||||| | || ||||||||||||||| |||||||||    
T  16785085 aagggaaatgctaaccggtg-ctccagggcactggttaaggatatgaaaaa 16785134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 43714373 - 43714339
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggtta 201  Q
    ||||| |||||||||||||||||||||||||||||    
T  43714373 ggaaacgctaaccggtgcccccggggcactggtta 43714339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 8453290 - 8453225
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||| | || |||| |||||||| |||||| || || |||||||||||||||||    
T  8453290 gtaacaattattgattatcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 8453225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 18842715 - 18842780
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||| | ||  ||| |||||||| |||||| || || |||||||||||||||||    
T  18842715 gtaacatttattgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 18842780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 31964755 - 31964820
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| || |||| |||||||| ||| ||| | || |||||| ||||||||||    
T  31964755 gtaacatttattgattgtcttggtttgtgtaaaatgtcataaaatgacaattaaagaggaacggag 31964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 42035154 - 42035117
Alignment:
Q  179 cggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  42035154 cggtgcccccggagcactggttaaggatatgaaaaagg 42035117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 6254285 - 6254325
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||| |||||||||||||||||  |||||||||||    
T  6254285 aagggaaatgttaaccggtgcccccgggaaactggttaagg 6254325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 15450584 - 15450624
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||| ||||||| || ||||||||||||||||||||||||    
T  15450584 aagggtaatgctatccagtgcccccggggcactggttaagg 15450624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 15451249 - 15451217
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||| ||||||||||||||||||    
T  15451249 tgctaaccggtgcctccggggcactggttaagg 15451217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 15596531 - 15596595
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||| ||||||||| | || |||| |||||||| |||||| || || |||||||||||||||||    
T  15596531 taacaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 15596595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 17074631 - 17074571
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| || |||| |||||||| | |||| || || |||||||||||||||||    
T  17074631 atttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 17074571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 17573639 - 17573699
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| || |||| |||||||| | |||| || || |||||||||||||||||    
T  17573639 atttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggag 17573699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 18955693 - 18955729
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaa 202  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  18955693 gggaaatgctaaccgatgcccccgtggcactggttaa 18955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 29091139 - 29091075
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||| ||||||||||||| ||  ||| |||||||| ||||||||| || |||||||| |||||||    
T  29091139 gtaatatttattgattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacgga 29091075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 38221999 - 38222063
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| ||| || |||| |||||| | ||||||||| ||  ||||||||||||||||    
T  38221999 taacatttattgaatgtcttggtttgtgtaaagtgtcaaaaagtgaccgttaaaaaggaacggag 38222063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 561706 - 561654
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  561706 aagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 561654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 27856584 - 27856532
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  27856584 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaagg 27856532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 30486208 - 30486260
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  30486208 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaagg 30486260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 4381798 - 4381845
Alignment:
Q  169 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  4381798 aaatgctaaccggtgcccccggtgcactggttaagggtatgaaaaagg 4381845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 6580188 - 6580239
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  6580188 agggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaagg 6580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 20552931 - 20552981
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaagg 20552981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 31438646 - 31438696
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaagg 31438696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 32361056 - 32361006
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  32361056 agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaag 32361006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 13215579 - 13215644
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| |||||| |||| |||||||| ||||||||| || |||||||||||||||||    
T  13215579 gtaacatttattgagtgtattggtttgtgtaaaatgtcaaaaagtaacaattaaaaaggaacggag 13215644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 22068507 - 22068455
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  22068507 aagggaaatgctaacaagtgcccccggggcactggttaaggatatgaaaaagg 22068455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 31024997 - 31024933
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||||||| ||| || |||| |||||||||||||||||||||  |||||||||||||||    
T  31024997 gtaacatttattgagtgtcttggtttgtgtaaaatatcaaaaagttacagttaaaaaggaacgga 31024933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 35851957 - 35851917
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35851957 aagggaaatgctaaccggtgcccccggggcactggttaagg 35851917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 9706973 - 9707036
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgg 147  Q
    |||| |||||||||||||||| |||| |||||||| ||||||||| || |||||||||||||||    
T  9706973 gtaatatttattgattgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgg 9707036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 44587902 - 44587952
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaagg 44587952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 13849767 - 13849707
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| || |||||| |||||||||||||| | || |||||||||||||||||    
T  13849767 atttattgattgttttggtttatataaaatatcaaaaaatgacaattaaaaaggaacggag 13849707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 31390010 - 31390062
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| |||||| |||||||||| ||||||| |||||||||||    
T  31390010 aagggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaagg 31390062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 38591062 - 38591010
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| ||| |||||||||||||||  |||||||||||    
T  38591062 aagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaagg 38591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 4952753 - 4952690
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgg 147  Q
    |||||||||||||||  | || ||||||||||||| ||||||||| || |||||||||||||||    
T  4952753 gtaacatttattgatcattttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaacgg 4952690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 13965795 - 13965858
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||||| || |||| |||||||| ||||||||| || |||||||||||||||||    
T  13965795 aacaattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 13965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 26891850 - 26891799
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||| |||||||    
T  26891850 agggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaagg 26891799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 14541517 - 14541579
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||| |||||||||||||||| |||| | |||||| ||||||||| || ||||||||||||||    
T  14541517 gtaatatttattgattgtattggtttgtataaaatgtcaaaaagtgacaattaaaaaggaacg 14541579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 22887749 - 22887798
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||||| |||| |||||||| ||||||||| |||||||||    
T  22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaa 22887798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 29771417 - 29771454
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29771417 ggaaatgctaaccgatgcccccggggcactggttaagg 29771454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 30264649 - 30264588
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggagcaggta 155  Q
    |||||||| || ||||||||||||| |||||| || || ||||||||||||||||| |||||    
T  30264649 ttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggaggta 30264588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 44360619 - 44360684
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||||| || |||| |||||||| |||||| || || |||||||||||||||||    
T  44360619 gtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 44360684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 25186887 - 25186823
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    ||||||| |||||||| | || |||| |||||||| ||||||||| ||| |||||||||||||||    
T  25186887 gtaacatatattgattatcttggtttgtgtaaaatgtcaaaaagtgacggttaaaaaggaacgga 25186823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 32860100 - 32860152
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||||||| ||||||| |||||||| ||| |||||||    
T  32860100 aagggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaagg 32860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 44854528 - 44854488
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  44854528 aagggaaatgctaaccggtactcccggggcactggttaagg 44854488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 3668295 - 3668249
Alignment:
Q  169 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||    
T  3668295 aaatgctaaccggtgccccc-ggacactggttaagggtatggaaaagg 3668249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 15893627 - 15893572
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  15893627 ttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 15893572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 20553111 - 20553080
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  20553111 tgctaaccggtgcccccggggcactggttaag 20553080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 30486390 - 30486359
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  30486390 tgctaaccggtgcccccggggcactggttaag 30486359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 31011773 - 31011710
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||| || |||| | |||||| |||||| || || |||||||||||||||||    
T  31011773 aacatttattgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggag 31011710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 34442719 - 34442669
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||| |||||||||||  ||||||| ||||||||||    
T  34442719 aagggaaatgctaaccggtg-ccccggggcacatgttaaggatatgaaaaag 34442669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 35470407 - 35470368
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  35470407 agggaaatgttaaccggtgcctccggggcactggttaagg 35470368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 8443871 - 8443925
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    ||||||||||| || |||| |||||||| ||||||||| || |||||||||||||    
T  8443871 ttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 8443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 1395750 - 1395814
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| | |||||| |||| |||||||| |||||||| |||  ||||||||||||||||    
T  1395750 gtaacatttattaagtgtattggtttgtgtaaaatgtcaaaaag-tacagttaaaaaggaacggag 1395814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 1859161 - 1859210
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    |||||||||||||| ||||||||||||| | ||||||||| ||| |||||    
T  1859161 agggaaatgctaactggtgcccccggggtaatggttaaggatataaaaaa 1859210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 5431633 - 5431666
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactg 197  Q
    |||||||||| |||||||||||||||||||||||    
T  5431633 aagggaaatgttaaccggtgcccccggggcactg 5431666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 6983302 - 6983265
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  6983302 ggaaatgttaaccggtgcccccggggcactagttaagg 6983265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 34262879 - 34262814
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||| ||| || |||| |||||||||| ||||| | || |||||||||||||||||    
T  34262879 gtaacaattattgaatgtcttggtttgtgtaaaatataaaaaattgacaattaaaaaggaacggag 34262814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 45261901 - 45261942
Alignment:
Q  164 aagggaaatgctaaccggtg-cccccggggcactggttaagg 204  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  45261901 aagggaaatgctaaccggtgccccccagggcactggttaagg 45261942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 13754142 - 13754205
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||||| ||||||| || |||| |||||||| |||||| || || ||||||||||||||||    
T  13754142 gtaacatttaatgattgtcttggtttgtgtaaaatgtcaaaa-gtgacaattaaaaaggaacgga 13754205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 19037766 - 19037726
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||| ||||||| || ||||||||||||||||||||||||    
T  19037766 aagggcaatgctatccagtgcccccggggcactggttaagg 19037726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 28277517 - 28277549
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||| |||||||||||||||||||||||||    
T  28277517 tgctaactggtgcccccggggcactggttaagg 28277549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 29293095 - 29293063
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||| ||||||||    
T  29293095 tgctaaccggtgcccccggggcaccggttaagg 29293063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 39865445 - 39865405
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||| |||||||||| |||||||||||||||||| |||||    
T  39865445 aagggcaatgctaaccagtgcccccggggcactggataagg 39865405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 43077479 - 43077543
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||| ||||||||||| || |||| |||||||| | ||||| | || |||||||||||||||||    
T  43077479 taacacttattgattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggag 43077543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 42770178 - 42770126
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42770178 aagggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaagg 42770126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 29210412 - 29210463
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29210412 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaagg 29210463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 14350465 - 14350413
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  14350465 aagggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaagg 14350413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 18043160 - 18043212
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18043160 aagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaagg 18043212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 38702117 - 38702069
Alignment:
Q  168 gaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaagg 38702069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 29657770 - 29657821
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  29657770 agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaagg 29657821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 30702344 - 30702281
Alignment:
Q  81 gtggtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaa 144  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||| || ||||||||||||    
T  30702344 gtggtaacatttattgattgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 30702281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 24178649 - 24178599
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaagg 24178599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 32168359 - 32168298
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| || |||| |||||||||||||||||| || |||||||||||||||||    
T  32168359 catttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggag 32168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 38162850 - 38162899
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaag 38162899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 4100959 - 4100895
Alignment:
Q  85 taacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||||||| || |||| |||||||||||||||||| |  |||||||||||||||||    
T  4100959 taacatttattgattgtcttagtttgtgtaaaatatcaaaaagtaataattaaaaaggaacggag 4100895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 12072250 - 12072198
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  12072250 aaggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaagg 12072198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 15227737 - 15227789
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||||    
T  15227737 aagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaagg 15227789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 28726094 - 28726054
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28726094 aagggaaatgctaaccggtgcccccggggcactggttaagg 28726054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 51065936 - 51065885
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  51065936 aagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaag 51065885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 17333467 - 17333418
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  17333467 gggaaatgctaaccggtgccccc-gggcactggttaaggatatgaaaaagg 17333418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 29683193 - 29683231
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaa 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29683193 aagggaaatgctaaccggtgcccccggggcactggttaa 29683231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 38595939 - 38595901
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38595939 gggaaatgctaaccggtgcccccggggcactggttaagg 38595901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 13961211 - 13961260
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatataaaaaa 13961260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 40926804 - 40926739
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| |||||||||||||| ||||||||||||| |||||| || || |||||||| ||||||||    
T  40926804 gtaacaattattgattgtattggtttatgtaaaatgtcaaaatgtgacaattaaaaaagaacggag 40926739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 51613601 - 51613662
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| || |||| |||||||||| ||||||| || |||||||||||||||||    
T  51613601 catttattgattgtcttggtttgtgtaaaatataaaaaagtgacaattaaaaaggaacggag 51613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 9266916 - 9266864
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||| ||||||||| ||||| |||||||||||||| |||||||||||    
T  9266916 aagggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaagg 9266864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 42800292 - 42800352
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaa 144  Q
    |||||||||||||||||| || |||| |||||||| ||||||||| || ||||||||||||    
T  42800292 gtaacatttattgattgttttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 42800352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 51368973 - 51368921
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||| || || ||| |||||||||||||||||||||||    
T  51368973 aagggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaagg 51368921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 5694321 - 5694368
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaa 213  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaa 5694368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 30657606 - 30657656
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||||||||||| ||||||||||| ||||||  |||||||||    
T  30657606 aagggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaa 30657656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 36318541 - 36318603
Alignment:
Q  87 acatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||| |||||| |||| |||||| | ||||||||| || |||||||||||||||||    
T  36318541 acatttattgaatgtattggtttgtgtaaattgtcaaaaagtgacaattaaaaaggaacggag 36318603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 48383294 - 48383248
Alignment:
Q  169 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaag 215  Q
    |||||||||||||||| ||||||||||||||||||| | ||||||||    
T  48383294 aaatgctaaccggtgctcccggggcactggttaaggatgtgaaaaag 48383248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 52702332 - 52702294
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  52702332 gggaaatgctaaccggtgctcccggggcactggttaagg 52702294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 9127855 - 9127916
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| || |||||||||||||    
T  9127855 gtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 9127916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 32348164 - 32348228
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| |||||||||||||||| |||| |||||||| || |||||| || |||||||||||||||||    
T  32348164 gtaatatttattgattgtattggtttgtgtaaaatgtc-aaaagtgacaattaaaaaggaacggag 32348228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 35605789 - 35605846
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||||||| |||| |||||||| ||||| ||| || ||||||||||||||    
T  35605789 atttattgattgtattggtttgtgtaaaatgtcaaatagtgacaattaaaaaggaacg 35605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 35700426 - 35700361
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| ||  ||| |||||||||||| ||| | || |||||||||||||||||    
T  35700426 gtaacatttattgattgtcttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaacggag 35700361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 43809090 - 43809155
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||||| ||  |||||||||||| | ||||||| || |||||||||||||||||    
T  43809090 gtaacacttattgattgtcttaatttatgtaaaatgttaaaaagtgacaattaaaaaggaacggag 43809155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 48174720 - 48174659
Alignment:
Q  88 catttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||| ||  ||| |||||||||||||||||| |  |||||||||||||||||    
T  48174720 catttattgattgtcttgatttgtgtaaaatatcaaaaagtgataattaaaaaggaacggag 48174659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 31487825 - 31487765
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||| || |||| |||||||| |||||| || || |||||||||||||||||    
T  31487825 atttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 31487765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 47009991 - 47010043
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||| ||||||  |||| ||||||||||||| |||||||||||    
T  47009991 aagggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaagg 47010043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 1024752 - 1024807
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  1024752 ttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggag 1024807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 12072068 - 12072099
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  12072068 tgctaaccggtgcccccggggcactggttaag 12072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 12231112 - 12231057
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || ||||||||||||| |||||| || || |||||||||||||||||    
T  12231112 ttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 12231057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 18043342 - 18043311
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  18043342 tgctaaccggtgcccccggggcactggttaag 18043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 19032002 - 19031951
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| || |||||| | ||||||| |||||||||||    
T  19032002 agggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaagg 19031951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 19940719 - 19940684
Alignment:
Q  169 aaatgctaaccggtgcccccggggcactggttaagg 204  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19940719 aaatgttaaccggtgcccccggggcactggttaagg 19940684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 29210574 - 29210543
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  29210574 tgctaaccggtgcccccggggcactggttaag 29210543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 30686607 - 30686662
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||| || |||| ||||||||||||||| || || |||||||||||||||||    
T  30686607 ttgattgtcttggtttgtgtaaaatatcaaaacgtgacaattaaaaaggaacggag 30686662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 35255674 - 35255729
Alignment:
Q  86 aacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaag 141  Q
    |||| ||||||||||| || ||||||||||||| ||||||||| || |||||||||    
T  35255674 aacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaag 35255729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 42769996 - 42770027
Alignment:
Q  172 tgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||||||||||||||||||||    
T  42769996 tgctaaccggtgcccccggggcactggttaag 42770027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 45431278 - 45431328
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||||||| |||| ||| |||||| |||||||||||    
T  45431278 agggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaagg 45431328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 3784899 - 3784849
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||| || |||||||||| | ||||||||||||| |||||||||||    
T  3784899 gggaaatgcaaatcggtgcccccagtgcactggttaaggatatgaaaaagg 3784849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 8464298 - 8464244
Alignment:
Q  94 ttgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacgga 148  Q
    |||||||| || ||||||||||||| |||||| || || ||||||||||||||||    
T  8464298 ttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 8464244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Original strand, 24178470 - 24178500
Alignment:
Q  173 gctaaccggtgcccccggggcactggttaag 203  Q
    |||||||||||||||||||||||||||||||    
T  24178470 gctaaccggtgcccccggggcactggttaag 24178500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 28481844 - 28481894
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||||||||| |  |||| |||||||||| |||||||||||    
T  28481844 gggaaatgctaaccggtgcctcttgggccctggttaaggatatgaaaaagg 28481894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 29830946 - 29831004
Alignment:
Q  91 ttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||| || |||| |||||||| |||||| || || |||||||||||||||||    
T  29830946 ttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggag 29831004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 30294567 - 30294517
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||| ||||| |||||| ||| ||||||||| |||||||||||    
T  30294567 gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaagg 30294517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 36850823 - 36850885
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||||||||||||| ||| ||  ||| |||||||||||||||| | || ||||||||||||||    
T  36850823 gtaacatttattgactgtcttgatttgtgtaaaatatcaaaaaatgacaattaaaaaggaacg 36850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 12721626 - 12721687
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||| ||||||| ||||| || ||||||||||||| | ||||||| || |||||||||||||    
T  12721626 gtaatatttatttattgtcttggtttatgtaaaatgttaaaaagtgacaattaaaaaggaac 12721687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 19011180 - 19011132
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||| ||| ||||||| |||||||| |||||||||||    
T  19011180 ggaaatgctaaccggtgtccc-ggggcacgggttaaggatatgaaaaagg 19011132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 19940557 - 19940586
Alignment:
Q  175 taaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||||||||||||||    
T  19940557 taaccggtgcccccggggcactggttaagg 19940586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 38597777 - 38597838
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaac 145  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||| ||  ||||||||||||    
T  38597777 gtaacatttattgagtgtcttagtttgtgtaaaatgtcaaaaagtgacagttaaaaaggaac 38597838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 204
Target Start/End: Original strand, 48282868 - 48282897
Alignment:
Q  175 taaccggtgcccccggggcactggttaagg 204  Q
    ||||||||||||||||||||||||||||||    
T  48282868 taaccggtgcccccggggcactggttaagg 48282897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 51974222 - 51974157
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||| ||||||||| ||| || |||  |||||||| ||||||||| || |||||||||||||||||    
T  51974222 gtaatatttattgaatgttttggttcgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 51974157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 52649780 - 52649715
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||||||||| ||  ||  || ||||| ||||||||| || |||||||||||||||||    
T  52649780 gtaacatttattgattgtcttgattagtgaaaaatgtcaaaaagtgacaattaaaaaggaacggag 52649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 6770335 - 6770387
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||  ||||||||||||| ||||||||||  |||||| |||||||||||    
T  6770335 aagggaatggctaaccggtgcctccggggcactaattaaggatatgaaaaagg 6770387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 10679509 - 10679545
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggtta 201  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  10679509 agggaaatgttaaccggtgctcccggggcactggtta 10679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 23473648 - 23473600
Alignment:
Q  168 gaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||| | |||||| |||||| ||||||||| |||||||||||    
T  23473648 gaaatgctaactgatgcccctggggcattggttaaggatatgaaaaagg 23473600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 23822528 - 23822560
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    |||||||||||||||||||||||| ||||||||    
T  23822528 atgctaaccggtgcccccggggcattggttaag 23822560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 30664172 - 30664204
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    |||||||||||||||| ||||||||||||||||    
T  30664172 atgctaaccggtgcccacggggcactggttaag 30664204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 38595757 - 38595789
Alignment:
Q  171 atgctaaccggtgcccccggggcactggttaag 203  Q
    ||||||||||||||| |||||||||||||||||    
T  38595757 atgctaaccggtgcctccggggcactggttaag 38595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 43286720 - 43286772
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| |||||||||||| || ||| ||| |||||||||||| |||||||||||    
T  43286720 aaggaaaatgctaaccgatgtccctgggacactggttaaggatatgaaaaagg 43286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 22959 - 23011
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22959 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaagg 23011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 68478 - 68428
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaa 214  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  68478 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaa 68428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 6295 - 6246
Alignment:
Q  167 ggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaagg 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 116202 - 116254
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| ||||||||||||||||||||||||||| |||||| | |||||||||||    
T  116202 aaggaaaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaagg 116254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 7610 - 7672
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacg 146  Q
    |||| ||||||||||||| ||  ||| |||||||||||||||||| || ||||||||||||||    
T  7610 gtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacg 7672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 50548 - 50598
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||    
T  50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaagg 50598  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 147182 - 147117
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||||||||| ||||| ||  ||| |||||||| ||||||||| || |||||||||||||||||    
T  147182 gtaacatttattaattgttttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggag 147117  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 419547 - 419490
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaag 141  Q
    |||||||||||||||||| || ||||||||||||| ||| ||||| || |||||||||    
T  419547 gtaacatttattgattgtcttggtttatgtaaaatgtcacaaagtgacaattaaaaag 419490  T

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Target: scaffold2146 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 743 - 803
Alignment:
Q  89 atttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    ||||||||||||||||  |||||||||||| | ||||||| |  |||||||||||||||||    
T  743 atttattgattgtattgatttatgtaaaatgttaaaaagtgaaaattaaaaaggaacggag 803  T

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Target: scaffold0190 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 14896 - 14932
Alignment:
Q  166 gggaaatgctaaccggtgcccccggggcactggttaa 202  Q
    |||||||||||||||||| ||||||||||||||||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaa 14932  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 95772 - 95720
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||| ||||||||||||||||||||| || ||||||||||  |||||||||||    
T  95772 aaggaaaatgctaaccggtgcccccgaggtactggttaagaatatgaaaaagg 95720  T

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Target: scaffold0886 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 4701 - 4765
Alignment:
Q  84 gtaacatttattgattgtatttgtttatgtaaaatatcaaaaagttacgattaaaaaggaacggag 149  Q
    |||||| ||||||||||| || |||||||||||||| | ||| || || |||||||||||||||||    
T  4701 gtaacaattattgattgtcttggtttatgtaaaata-ccaaatgtgacaattaaaaaggaacggag 4765  T

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Target: scaffold0206 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 11155 - 11106
Alignment:
Q  165 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    |||||||||||||| ||||||||  || |||||||||||| |||||||||||    
T  11155 agggaaatgctaactggtgcccc--ggacactggttaaggatatgaaaaagg 11106  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 147093 - 147041
Alignment:
Q  164 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 216  Q
    ||||||||||||||||||||| || ||||  || ||||||| |||||||||||    
T  147093 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaagg 147041  T

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