View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14138_high_62 (Length: 226)
Name: NF14138_high_62
Description: NF14138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14138_high_62 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 9146740 - 9146934
Alignment:
| Q |
15 |
aagaaagaaagaaaaatcgnnnnnnnngttaacgaatgtgaccccataaaaggggtaaagttgtagaggaatagtgaggggcatgtaagccattcaattt |
114 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9146740 |
aagaaagaaagaaaaatcgaaaaaaaagttaacgaatgtgaccccataaaaggggtaaagttgtagaggaatagtgaggggcatgtaagccattcaattt |
9146839 |
T |
|
| Q |
115 |
attgtggtagttagaattgaacaataaggggattaaaaggaatatacgtataaccaagatacactttattgtaagcatgtggtgagtgtgtaaag |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9146840 |
attgtggtagttagaattgaacaataaggggattaaaaggaatatacgtataaccaagatacactttattgtaagcatgtggtgaatgtgtaaag |
9146934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University