View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14138_high_9 (Length: 486)
Name: NF14138_high_9
Description: NF14138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14138_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 19 - 387
Target Start/End: Complemental strand, 21269116 - 21268748
Alignment:
| Q |
19 |
ctcatcagattttttgtttggttcattttccttcttgttatccttcttgggaagtggtgacatgagttcaactttcttcttaatcttctcagcaagattg |
118 |
Q |
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| T |
21269116 |
ctcatcagattttttgtttggttcattttccttcttgttatccttcttgggaattggtgaaatgagttcaactttcttcttaatcttctcagcaagattg |
21269017 |
T |
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| Q |
119 |
tctctcagttttgtggggtccacatttccggtgacggttacttttccggtttcactctctgctttcaccgtatcaacaccttaaaaacagaaacatggtt |
218 |
Q |
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| T |
21269016 |
tctctcagttttgtggggtccacatttccggtgacggttacttttccggtttcactctctgctttcaccgtatcaacaccttaaaaacagaaacatggtt |
21268917 |
T |
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| Q |
219 |
gttcaattttaacgattgaaaaatgaattgaagaacaatgatgaaaacccagatcggaaaaaatgtgtagaaacagaggagtgtgagaaaaatgatacct |
318 |
Q |
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| T |
21268916 |
gttcaattttaacgattgaaaaatgaattgaagaacaatgatgaaaacccagatcggaaaaaatgtgtagaaacagaggagtgtgagaaaaatgatacct |
21268817 |
T |
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| Q |
319 |
ttgatactgttaaggtgtttggttactttgttagcgcaaccttcgcaatgcatatagactttcaaaacc |
387 |
Q |
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| T |
21268816 |
ttgatgccgttaaggtgtttggtgactttgttagcgcaaccttcgcaatgcatatagactttcaaaacc |
21268748 |
T |
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