View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14138_low_61 (Length: 235)
Name: NF14138_low_61
Description: NF14138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14138_low_61 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 48 - 235
Target Start/End: Original strand, 36147199 - 36147383
Alignment:
| Q |
48 |
attacatatttacttactacatttgttccttcttttcacttcataccccaccacttcccatttccactccttcacacatcccattaaccatcaccaccaa |
147 |
Q |
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| T |
36147199 |
attacatatttact-actacatttgttccttcttttcacttcataccccaccact-cccatttccactccttcacacatcc-attaaccatcaccaccaa |
36147295 |
T |
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| Q |
148 |
gaaacatcacccacgattctctctcaacaatgacaaagccaaaatctaccaacgaagataacagcaccaccaccaccaacaacaacaa |
235 |
Q |
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| T |
36147296 |
gaaacatcacccacgattctctctcaacaatgacaaagccaaaatctaccaacgaagataacagcaccaccaccaccaacaacaacaa |
36147383 |
T |
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