View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14139_high_6 (Length: 276)
Name: NF14139_high_6
Description: NF14139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14139_high_6 |
 | |
|
| [»] chr7 (31 HSPs) |
| |
|
| [»] chr4 (6 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 31)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 10494954 - 10494679
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494954 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
10494855 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494854 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
10494755 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494754 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
10494679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 8667007 - 8667282
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8667007 |
aagtgacaaaggggtcacatctcgtagcaccaagttggggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
8667106 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
8667107 |
tcgtctgggttgatacccatgaataattccttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaa |
8667206 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||| |
|
|
| T |
8667207 |
catcatcaatatcattcttgtatatctttgaatccctgagacaggtgtcaactatattcatacactcattgaaaaa |
8667282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 8654038 - 8654313
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||||| |||| |||| |
|
|
| T |
8654038 |
aagtgacaatggggtaacatcacgtagcaccaagttggggacattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcc |
8654137 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||||||||||||| ||| || || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
8654138 |
tcatctgggttgatattcataaacaaagccttccccttgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaa |
8654237 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
8654238 |
catcatcaatatcattcttgtatatctttgaatctctgagacaactgtcaacaatattgatacactcattgaaaaa |
8654313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 8658951 - 8659217
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| || |||| |||||| |||| |||||||||||||||||||||| |
|
|
| T |
8658951 |
aagtgacaatggggtaacatcttgcagcaccaagtttgggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaacagcc |
8659050 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
|||||||||||||||| | || |||| ||||| ||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8659051 |
tcatctgggttgatactcttgtataaaaccttctttgggaaaaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaagaacaa |
8659150 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactc |
267 |
Q |
| |
|
|||| ||||||||| || | | ||| |||||||| || |||||||| |||||| | ||||||||||| |
|
|
| T |
8659151 |
tatcgtcaatatcactcatctgtatttttgaatcgctaagacaactctcaacagttttcatacactc |
8659217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 1301049 - 1301299
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||| ||||||||||| || |||| || ||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
1301049 |
aagtgacaatggggtaacatcttgcagcaccaagtttgggacattcttgaatcctttgcttaaaatagcagcttgaatagctgcaccataagcaacagcc |
1301148 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
|| || |||||||||| | || |||| | ||| || ||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1301149 |
tcgtc-gggttgatactcttgtataaaactttctccgggaaaatgtcttgcaatatatcttgcactttgggaatcctagacgagccacccacaagaacaa |
1301247 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaac |
252 |
Q |
| |
|
||||||| |||||| || || |||| |||||||| || |||||||| ||||| |
|
|
| T |
1301248 |
tatcatcgatatcactcatgcatatttttgaatcgctaagacaactctcaac |
1301299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13333948 - 13333829
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333948 |
aagtgataatgggataacatctcgtagcaccaagttcgggacagtcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
13333849 |
T |
|
| Q |
101 |
tcatctgggttgatacgcat |
120 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
13333848 |
tcatctgggttgatacgcat |
13333829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8545221 - 8545364
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||| |||||||||||| | ||||||||| | ||||||||| |||||||||||||||||||||||| |
|
|
| T |
8545221 |
aagtgacaaaggggtaacatctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaacagcc |
8545320 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaa |
144 |
Q |
| |
|
||||| ||||| || | | || |||||||||||||||| ||||| |
|
|
| T |
8545321 |
tcatcagggttaatgctcttgcataattccttccccttaaaaaa |
8545364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 207
Target Start/End: Complemental strand, 29582381 - 29582215
Alignment:
| Q |
41 |
acattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttga |
140 |
Q |
| |
|
||||||| || ||||||| ||| | ||||||||| ||||||||||||||||||||||||||||| |||||||| | |||| | || ||||||||||||| |
|
|
| T |
29582381 |
acattctcaatgccttcaatcagcaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttga |
29582282 |
T |
|
| Q |
141 |
aaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
207 |
Q |
| |
|
|||||||| ||||||| | |||||||||||||| ||||| |||||||| | ||| || |||||||| |
|
|
| T |
29582281 |
aaaattcttgcaatagctgatgcactttgggaattctagaagagccaccaataaggacgatatcatc |
29582215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 6789104 - 6789305
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||| || ||||||||| | ||||||||||| || ||| ||||| ||||||| ||||| | ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
6789104 |
gacaacggtgtaacatcttgcagcaccaagtttggaacactcttagagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcat |
6789203 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatc |
204 |
Q |
| |
|
| |||||||| | |||| | || ||||| ||| |||||| |||| ||||||| | |||||||||||||| ||||| || ||||| ||||| |||| ||| |
|
|
| T |
6789204 |
cagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaacatc |
6789303 |
T |
|
| Q |
205 |
at |
206 |
Q |
| |
|
|| |
|
|
| T |
6789304 |
at |
6789305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 210
Target Start/End: Original strand, 17259856 - 17260038
Alignment:
| Q |
28 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataat |
127 |
Q |
| |
|
||||||||| || |||||||| | || | |||| || | ||||||||||||||| ||||||||||||||||||||||| |||||||| | | || ||||| |
|
|
| T |
17259856 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataat |
17259955 |
T |
|
| Q |
128 |
tccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaat |
210 |
Q |
| |
|
||||| |||||||| || || ||||||| | ||||||||| ||||||||||| || ||||| ||||| |||| ||||||||| |
|
|
| T |
17259956 |
tccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaacatcatcaat |
17260038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 17267554 - 17267735
Alignment:
| Q |
28 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataat |
127 |
Q |
| |
|
||||||||| || |||||||| | || | |||| || | ||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||||| |
|
|
| T |
17267554 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataat |
17267653 |
T |
|
| Q |
128 |
tccttccccttgaa-aaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaa |
209 |
Q |
| |
|
|||||||||||||| || |||| ||||||| | ||||||||| ||||||||||| || ||||| ||||| |||| |||||||| |
|
|
| T |
17267654 |
tccttccccttgaagaagttct-gcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatcaa |
17267735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 8590230 - 8590432
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
|||||||| ||||||||| |||||||||| || || |||||||||| || |||| | | |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8590230 |
gacaatggagtaacatcttgtagcaccaaattaggaacattcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaacagcctcat |
8590329 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatc |
204 |
Q |
| |
|
|||| ||||| | || | | ||||||||| | ||||| ||| ||||||| | ||||||||||||||||||||| || ||||| ||||| |||| ||| |
|
|
| T |
8590330 |
ctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatc |
8590429 |
T |
|
| Q |
205 |
atc |
207 |
Q |
| |
|
||| |
|
|
| T |
8590430 |
atc |
8590432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 8575918 - 8576056
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||| || ||||||||||||| ||||||||| || ||||||||| |||||||||||| | |||||| || ||| | |||||||||||||||||||||| |
|
|
| T |
8575918 |
gacaacggtgtaacatctcgtaacaccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcat |
8576017 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaa |
143 |
Q |
| |
|
| |||||||| | | | ||||||||||||||||||||| |
|
|
| T |
8576018 |
cagggttgatgctcttacataattccttccccttgaaaa |
8576056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 8581288 - 8581494
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| | | |||||| || ||| |||||| ||||||||| | | ||||||||||| ||| |||||||||||||||||| |
|
|
| T |
8581288 |
aagtgacaatggtgtaacatctcgcaaaatcaagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaacagcc |
8581387 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||| |||||||| | | || ||||||||||||||| |||||| || | ||||| | |||||| ||||||||||| || ||||| ||||| |||| |
|
|
| T |
8581388 |
tcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaaggacaa |
8581487 |
T |
|
| Q |
201 |
tatcatc |
207 |
Q |
| |
|
|||||| |
|
|
| T |
8581488 |
catcatc |
8581494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 13333826 - 13333761
Alignment:
| Q |
211 |
atcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
276 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333826 |
atcactcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
13333761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 27831428 - 27831203
Alignment:
| Q |
28 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataat |
127 |
Q |
| |
|
||||||||| || |||||| ||| | | |||||||| | ||||||||| |||||||||||| |||||||||||||||| || ||||| | | || | || |
|
|
| T |
27831428 |
caccaagtttggaacattcataatgtcatcactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaa |
27831329 |
T |
|
| Q |
128 |
tccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattcttgtatatct |
227 |
Q |
| |
|
||||| ||||||||||| || |||||| | |||||||||||||||||| || |||||||| ||||| |||| |||||| ||| | |||||| |||| |
|
|
| T |
27831328 |
tcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatct |
27831229 |
T |
|
| Q |
228 |
ttgaatccctgagacaactgtcaaca |
253 |
Q |
| |
|
| || || |||||||||| |||||| |
|
|
| T |
27831228 |
tagagtcagtgagacaactctcaaca |
27831203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 8537638 - 8537830
Alignment:
| Q |
15 |
taacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
114 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||| |||| | ||||| | ||||||||| ||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
8537638 |
taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat |
8537737 |
T |
|
| Q |
115 |
acgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
207 |
Q |
| |
|
| | || | ||||||||| ||||||| | | ||| ||| ||||||||||||||||||||| |||||||| || || |||| |||||| |
|
|
| T |
8537738 |
gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc |
8537830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 8616266 - 8616475
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcact---caaaatagcagcctgaacagctgcaccataagcaaca |
97 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||| || |||||||||||| || | | ||| | |||||||||||| ||||| ||| ||||||| |
|
|
| T |
8616266 |
aagtgacagaggggtaacatctcgcagcgccaagtttggaacattcttaaagtctgtagtacccaacaaagcagcctgaactgctgccccactagcaaca |
8616365 |
T |
|
| Q |
98 |
gcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaa |
197 |
Q |
| |
|
|||||||| || ||||| | || | || |||||||| | |||||| || |||||| ||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
8616366 |
gcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccgacaagaa |
8616465 |
T |
|
| Q |
198 |
caatatcatc |
207 |
Q |
| |
|
|||||||||| |
|
|
| T |
8616466 |
caatatcatc |
8616475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 8586286 - 8586020
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||| || || ||||||||| ||| || || | || ||||||||| || || ||| |||||||||| |
|
|
| T |
8586286 |
aagtgacagaggggtaacatctcgcagcaccaagtttggaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaacagcc |
8586187 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||| || ||||| | || |||| || ||||| ||||| || || |||||| ||||| ||||||||||| || ||||||||||| ||||| |||| |
|
|
| T |
8586186 |
tcatcaggattgatgttcttgcataaatctttcccattgaagaagtcactcaatagttcctgtactttgggaattctggacgagccaccgacaaggacaa |
8586087 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactc |
267 |
Q |
| |
|
|||| || | | ||||||| | |||||| ||||| | |||||||| |||||| |||| |||||||| |
|
|
| T |
8586086 |
tatcgtctacaccattcttctctatcttagaatcggtaagacaactctcaacagtatttatacactc |
8586020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 7878309 - 7878107
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
|||||||| ||||||||| | | |||||| || || |||||||||| || |||| | | ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7878309 |
gacaatggagtaacatcttgcaacaccaaattaggaacattcttaataccatcacaaagcagagcagcctgaacagctgcaccataagcaacagcttcat |
7878210 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatc |
204 |
Q |
| |
|
| |||||||| | || | | ||||||||||| ||||| || ||||||| | |||||||||| |||||||||| || ||||| ||||| |||| ||| |
|
|
| T |
7878209 |
ccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtacaacatc |
7878110 |
T |
|
| Q |
205 |
atc |
207 |
Q |
| |
|
||| |
|
|
| T |
7878109 |
atc |
7878107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 8569899 - 8570105
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||| ||||||||||| | |||||||| || ||| |||||| || |||||| | | ||||||||| ||||||||| |||||||||||| |
|
|
| T |
8569899 |
aagtgacaatggtgtaacatctcgcaaaaccaagtttggaacactcttaacgctttcactatgcaaaacagcctgaatagctgcaccgtaagcaacagcc |
8569998 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||| ||||| || | || ||||||||||||||| |||||| ||| | ||||| | | |||||| ||||||||||| || ||||| ||||| |||| |
|
|
| T |
8569999 |
tcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccaccaacaaggacaa |
8570098 |
T |
|
| Q |
201 |
tatcatc |
207 |
Q |
| |
|
|||||| |
|
|
| T |
8570099 |
catcatc |
8570105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 8609505 - 8609711
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
||||||||| || ||||||||||| ||||||||||| || || || | |||||||| ||| | ||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
8609505 |
aagtgacaaaggtgtaacatctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaaccgcc |
8609604 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||| |||||||| | ||| | || ||||| || |||||||| ||| ||| ||| | || |||||| ||||||||||| || || || |||||||||| |
|
|
| T |
8609605 |
tcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaagaacaa |
8609704 |
T |
|
| Q |
201 |
tatcatc |
207 |
Q |
| |
|
|||||| |
|
|
| T |
8609705 |
catcatc |
8609711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8671678 - 8671608
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcag |
71 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
8671678 |
aagtgacaatggcgtaacatctcgtagcaccaagttggggacattcttaaagcctttgctcaaaatagcag |
8671608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 206
Target Start/End: Complemental strand, 29578212 - 29578047
Alignment:
| Q |
41 |
acattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttga |
140 |
Q |
| |
|
|||||||||| ||| ||| |||| | ||||||||| |||||||||||||||||||||||||| || ||||| || | |||| | || ||| | ||||||| |
|
|
| T |
29578212 |
acattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaacagcctcgtcagggtttatgctcatgcacaaatccctacccttga |
29578113 |
T |
|
| Q |
141 |
aaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcat |
206 |
Q |
| |
|
|||| ||| ||||||| | | ||||||||||||| ||||| || || || ||||| ||||| |||| |
|
|
| T |
29578112 |
aaaagtcttgcaatagtttccgcactttgggaattctagatgaacctccaacaaggacaatttcat |
29578047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 3146879 - 3146965
Alignment:
| Q |
28 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
114 |
Q |
| |
|
||||||||| || ||||| |||||| |||||||||| | |||||| || |||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
3146879 |
caccaagtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgat |
3146965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 8102311 - 8102460
Alignment:
| Q |
57 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatag |
156 |
Q |
| |
|
||||||| |||||||| |||||||| |||||||||||||||||||| || |||||||| | || ||| ||||| || ||||| || ||| |||| || |
|
|
| T |
8102311 |
cactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacag |
8102410 |
T |
|
| Q |
157 |
atcctgcactttgggaatcctagacgagccacccacaagaacaatatcat |
206 |
Q |
| |
|
| ||| |||||||||||||||| || ||||| |||||||||| ||||| |
|
|
| T |
8102411 |
ttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcat |
8102460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 8646469 - 8646608
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||||||||| |||||| | | ||||||||| || ||||||||||||| |||| || | |||||||||||| ||||| ||||||||||| ||| ||| |
|
|
| T |
8646469 |
gacaatggggtgacatcttgaaacaccaagtttggagcattcttaaagccatcacataataaagcagcctgaacggctgcgccataagcaacggccacat |
8646568 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaaa |
144 |
Q |
| |
|
| |||||||| | | | ||||||||||| | |||||||| |
|
|
| T |
8646569 |
cagggttgatgctctcgcataattccttctcattgaaaaa |
8646608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 27846655 - 27846573
Alignment:
| Q |
32 |
aagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
114 |
Q |
| |
|
||||| || |||||||||| | | |||||||| | ||||||||| |||||||| ||| |||||||||||||||| |||||||| |
|
|
| T |
27846655 |
aagtttggaacattcttaatgtcatcactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgat |
27846573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 39985290 - 39985338
Alignment:
| Q |
57 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatc |
105 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
39985290 |
cactcaagatagcagcctgaacagcagcaccatatgcaacagcctcatc |
39985338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 8017937 - 8017878
Alignment:
| Q |
57 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
116 |
Q |
| |
|
|||||||||| || || || ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
8017937 |
cactcaaaattgctgcttgtacagcggcaccataagcaacagcctcgtctgggttgatac |
8017878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 8558975 - 8559065
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
95 |
Q |
| |
|
||||| ||||||||||||| ||||||| ||| || ||||||||| | ||||||| | | | ||||||| ||||||||||||||||||| |
|
|
| T |
8558975 |
gacaaaggggtaacatctctcagcaccatgtttggaacattcttagtgtcttcactaagcaaaacagcctggacagctgcaccataagcaa |
8559065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 9336471 - 9336196
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9336471 |
aagtgacaatggggtaacatctcgtagcaccaagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcc |
9336372 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9336371 |
tcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaa |
9336272 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaa |
276 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
9336271 |
tatcatcaatattactcttgtatatctttgaatccctgagacaggtgtcaacaatattcatacactcattgaaaaa |
9336196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 30774840 - 30775092
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
||||||||| ||||| |||||||| |||||||| || ||| ||||||||| |||||||||||| | ||||||||| |||||||| || | |||||| ||| |
|
|
| T |
30774840 |
aagtgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcc |
30774939 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||| || ||||| | | || | || |||||||| ||||| || | ||||||| ||||||||||||||||||||||| || ||||| |||||||||| |
|
|
| T |
30774940 |
tcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaa |
30775039 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaaca |
253 |
Q |
| |
|
||||||| | | | |||||| || ||||||||| | |||||||| |||||| |
|
|
| T |
30775040 |
tatcatctacactactcttgtctacctttgaatcagtaagacaactctcaaca |
30775092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 35132048 - 35132250
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||| || |||||||| ||| |||||| || || ||||| || | ||||| |||||| | |||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
35132048 |
gacaaaggtgtaacatcctgtaacaccaactttggaacattttttatgcctttactcaacaaagcagcctgaactgctgccccataagctacagcctcat |
35132147 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatc |
204 |
Q |
| |
|
| ||||| || | | || | || |||||||| |||||||| | | ||||||| | ||||||||||||||||||||| || || || |||||||||| ||| |
|
|
| T |
35132148 |
cggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaacaacatc |
35132247 |
T |
|
| Q |
205 |
atc |
207 |
Q |
| |
|
||| |
|
|
| T |
35132248 |
atc |
35132250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 209
Target Start/End: Complemental strand, 23597107 - 23596957
Alignment:
| Q |
59 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagat |
158 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| || | |
|
|
| T |
23597107 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
23597008 |
T |
|
| Q |
159 |
cctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaa |
209 |
Q |
| |
|
|| || ||||||||||||| ||| || || |||||||||| |||||||| |
|
|
| T |
23597007 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaa |
23596957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 23588257 - 23588200
Alignment:
| Q |
57 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
114 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||| |||||||| ||||| |||||||| |
|
|
| T |
23588257 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgat |
23588200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 54396069 - 54396126
Alignment:
| Q |
59 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
116 |
Q |
| |
|
|||||||| || || |||||||| ||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
54396069 |
ctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatac |
54396126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 4679137 - 4678863
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| |||||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
4679137 |
aagtgacaatggggtaacatctcgcagcacaaaattcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaacagcc |
4679038 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
|||||||||||||||| | || | || ||||||| ||| ||||| ||| |||||||||||||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
4679037 |
tcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaa |
4678938 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaa |
275 |
Q |
| |
|
||||||||||| | || | ||||||||||| || |||||||| | |||| | | |||||||||| |||||| |
|
|
| T |
4678937 |
catcatcaatattactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaa |
4678863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 15594637 - 15594827
Alignment:
| Q |
16 |
aacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgata |
115 |
Q |
| |
|
||||||| ||| ||||||||| || ||||| ||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15594637 |
aacatcttgtatcaccaagtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatg |
15594736 |
T |
|
| Q |
116 |
cgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcat |
206 |
Q |
| |
|
| |||| | |||||||| |||| |||||| || |||||| | |||||||||||||||||||| || ||||| |||| |||||||||| |
|
|
| T |
15594737 |
ctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaatgacaatatcat |
15594827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 34467367 - 34467174
Alignment:
| Q |
2 |
agtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcct |
101 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||| |||||| | |||||| || |||||||| ||||||| ||||||| |
|
|
| T |
34467367 |
agtgacaatggtgtaacatctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcct |
34467268 |
T |
|
| Q |
102 |
catctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaag |
195 |
Q |
| |
|
|||| |||||||| | || ||| ||||| || |||||||| || ||||||| | ||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
34467267 |
catcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaag |
34467174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 52549522 - 52549422
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||| || |||||||| | |||||||| || || ||||||| || |||||||||||| | ||||||||||||||||| |||||||| ||| |||||| |
|
|
| T |
52549522 |
gacaaaggtgtaacatcctgcagcaccaactttggaacattctgaatgccttcactcaacaatgcagcctgaacagctgcgccataagctacaacctcat |
52549423 |
T |
|
| Q |
105 |
c |
105 |
Q |
| |
|
| |
|
|
| T |
52549422 |
c |
52549422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 16658093 - 16657831
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
16658093 |
gacaatggggtaacatctctcaacaccaaatctgggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcat |
16657994 |
T |
|
| Q |
105 |
ctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatc |
204 |
Q |
| |
|
| |||||||||| || |||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
16657993 |
ccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaacgtc |
16657894 |
T |
|
| Q |
205 |
atcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactc |
267 |
Q |
| |
|
|||||||||| ||| ||||||||||| | |||||| | |||||| | ||||||||||| |
|
|
| T |
16657893 |
atcaatatcaccaatgtgcatctttgaatcacgaagacaattctcaacagttttcatacactc |
16657831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 16662572 - 16662305
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| || |||| ||||| |||||||||||| | |||||| || |||||||| ||||||||||||||| |
|
|
| T |
16662572 |
aagtgacaatggggtaacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcc |
16662473 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
200 |
Q |
| |
|
||||| |||||||| | | || | || |||||||| ||||| || | |||||| ||||||||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
16662472 |
tcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaa |
16662373 |
T |
|
| Q |
201 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcg |
268 |
Q |
| |
|
|||||| | | | ||||| |||||||||||| | |||||| |||||||| |||||||||||| |
|
|
| T |
16662372 |
tatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcg |
16662305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43625000 - 43625143
Alignment:
| Q |
1 |
aagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcc |
100 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| || || |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43625000 |
aagtgacaaaggggtaacatctcgcagcaccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcc |
43625099 |
T |
|
| Q |
101 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaa |
144 |
Q |
| |
|
||||| ||||| || | | || ||||||||||||||||||| |
|
|
| T |
43625100 |
tcatcagggtttatgctttcgcatgattccttccccttgaaaaa |
43625143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 12245959 - 12245734
Alignment:
| Q |
28 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataat |
127 |
Q |
| |
|
|||||| || || |||||||||| ||| |||||| | |||||| ||||||||||| ||||||||||||||||| || ||||| || | | || | ||| |
|
|
| T |
12245959 |
caccaaatttggaacattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaat |
12245860 |
T |
|
| Q |
128 |
tccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattcttgtatatct |
227 |
Q |
| |
|
|||||||| |||||||| || | ||||| | || ||||||||||||||||| || ||||| ||||| |||| |||||| ||| | |||||| |||| |
|
|
| T |
12245859 |
tccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatcatctatagtactcttgtccatct |
12245760 |
T |
|
| Q |
228 |
ttgaatccctgagacaactgtcaaca |
253 |
Q |
| |
|
||| |||| | | |||||| |||||| |
|
|
| T |
12245759 |
ttgcatccataatacaactctcaaca |
12245734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 14703021 - 14703202
Alignment:
| Q |
26 |
agcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaata |
125 |
Q |
| |
|
|||||||| ||||| |||||||| | | |||||||||| | |||||||||||||||||| |||||||| ||||| ||||| ||||| || | || | | |
|
|
| T |
14703021 |
agcaccaacttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcaca |
14703120 |
T |
|
| Q |
126 |
attccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
207 |
Q |
| |
|
| |||||||||| |||||| || | |||| | ||| ||||||||||||| ||| || ||||| |||||||||| |||||| |
|
|
| T |
14703121 |
actccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatc |
14703202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 253
Target Start/End: Original strand, 11999023 - 11999247
Alignment:
| Q |
28 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataat |
127 |
Q |
| |
|
|||||| || || |||||||||| |||||||||| | |||||| ||||||||||| |||||||| ||||||||||| ||||| || | | || | || |
|
|
| T |
11999023 |
caccaaatttggaacattcttaacatcttcactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaac |
11999122 |
T |
|
| Q |
128 |
tccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattcttgtatatct |
227 |
Q |
| |
|
|||||||| |||||||| || | ||||| | || |||||||| |||||||| || ||||| ||||| |||| |||||| ||| | |||||| |||| |
|
|
| T |
11999123 |
tccttcccgttgaaaaagtcatgtaatagctgttggactttggg-atcctagaagatccaccaacaagtacaacatcatctatagtactcttgtccatct |
11999221 |
T |
|
| Q |
228 |
ttgaatccctgagacaactgtcaaca |
253 |
Q |
| |
|
||| |||| | | |||||| |||||| |
|
|
| T |
11999222 |
ttgcatccataatacaactctcaaca |
11999247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 7541857 - 7541918
Alignment:
| Q |
44 |
ttcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatc |
105 |
Q |
| |
|
||||||| |||| ||||||| | ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7541857 |
ttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatc |
7541918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 12234349 - 12234456
Alignment:
| Q |
72 |
cctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttggg |
171 |
Q |
| |
|
||||||||||||| |||||||||| ||||| || ||||| |||| | || | | ||||||||||||||||| || ||||||| | |||||||||||| |
|
|
| T |
12234349 |
cctgaacagctgcctcataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttggg |
12234447 |
T |
|
| Q |
172 |
aatcctaga |
180 |
Q |
| |
|
||||||||| |
|
|
| T |
12234448 |
aatcctaga |
12234456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 12259108 - 12258955
Alignment:
| Q |
54 |
cttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaa |
153 |
Q |
| |
|
||||||| || | ||||||||||| ||| || ||| |||| ||||||||||| || || || | | || | || || |||||||||||||| || | || |
|
|
| T |
12259108 |
cttcacttaacaaagcagcctgaatagccgccccaaaagctacagcctcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaa |
12259009 |
T |
|
| Q |
154 |
tagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
207 |
Q |
| |
|
||| | |||||||||| |||||||||| || ||||| ||||| |||| |||||| |
|
|
| T |
12259008 |
tagctgctgcactttgagaatcctagaagacccacctacaaggacaacatcatc |
12258955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 207
Target Start/End: Original strand, 12528126 - 12528298
Alignment:
| Q |
35 |
ttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttcc |
134 |
Q |
| |
|
||||| ||| |||| | |||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||| | | || |||| ||||| | |
|
|
| T |
12528126 |
ttcggaacagtcttcatgccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgc |
12528225 |
T |
|
| Q |
135 |
ccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
207 |
Q |
| |
|
|||||||||| || ||||||| | || ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
12528226 |
ccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatc |
12528298 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 43744419 - 43744676
Alignment:
| Q |
16 |
aacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgata |
115 |
Q |
| |
|
||||||| | ||||||| ||| || || || ||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||||| ||||| || |
|
|
| T |
43744419 |
aacatcttgcagcaccacgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggttaatg |
43744518 |
T |
|
| Q |
116 |
cgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcat |
215 |
Q |
| |
|
| | | || |||||||| |||||||| ||||||| | || ||||| ||||||||||| |||||||| |||||||||| ||||| ||| | |
|
|
| T |
43744519 |
ttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgc |
43744618 |
T |
|
| Q |
216 |
tcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaa |
273 |
Q |
| |
|
|||||| ||||| | ||| | |||||||| |||||||| |||| ||||||| |||| |
|
|
| T |
43744619 |
tcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaa |
43744676 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 28219510 - 28219616
Alignment:
| Q |
5 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
104 |
Q |
| |
|
||||| || ||||||||| | |||||||| ||||| || || ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
28219510 |
gacaaaggtgtaacatcttgcagcaccaacttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcat |
28219609 |
T |
|
| Q |
105 |
ctgggtt |
111 |
Q |
| |
|
| ||||| |
|
|
| T |
28219610 |
cagggtt |
28219616 |
T |
|
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