View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14139_low_3 (Length: 424)
Name: NF14139_low_3
Description: NF14139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14139_low_3 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 383; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 18 - 408
Target Start/End: Original strand, 5853440 - 5853830
Alignment:
| Q |
18 |
gagcacagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagata |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5853440 |
gagcacagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagata |
5853539 |
T |
 |
| Q |
118 |
tctcacatcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaa |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5853540 |
tctcacatcttggagaagccctcaagatcctgctgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaa |
5853639 |
T |
 |
| Q |
218 |
agatttttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactg |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5853640 |
agatttttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactg |
5853739 |
T |
 |
| Q |
318 |
acaaagaattctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgtcttct |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5853740 |
acaaagaattctcttatcaatatgaaactatgaaccgttcaattattactagaatggagctagatccatccggaaattcacaacgtcttct |
5853830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 27 - 403
Target Start/End: Complemental strand, 5485587 - 5485211
Alignment:
| Q |
27 |
attttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctcacatc |
126 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5485587 |
atttcttgtgggaaagttttgattatcctggtaacactttccttgctggaatgaagctgaaaagtaacttagttactggtccatatagatatctcacatc |
5485488 |
T |
 |
| Q |
127 |
ttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatttttg |
226 |
Q |
| |
|
||||| || ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||| || | || | |
|
|
| T |
5485487 |
ttggaaaaaccctcaagatcctgctgaaggtgagtgttcatataagatagatatacatggttttcctcaactggttaattcaaagggagcaaaagttcta |
5485388 |
T |
 |
| Q |
227 |
tatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaagaat |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| |||||||||| |
|
|
| T |
5485387 |
tatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagactgcgtagagtcttgaatttctcagtagtagtcaccgacaaagaat |
5485288 |
T |
 |
| Q |
327 |
tctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgt |
403 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| ||||||| ||| ||||||||||| |||| ||||||||| |
|
|
| T |
5485287 |
tctcttatcaatatgaaactttgaacagttcaattaatactagattggtgctagatccatatggaatgtcacaacgt |
5485211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 27 - 403
Target Start/End: Complemental strand, 5491008 - 5490632
Alignment:
| Q |
27 |
attttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctcacatc |
126 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5491008 |
atttattgtgggaaagttttgattatcctggtaacactttccttgctggaatgaagctgaaaagtaacttagttactggtccatatagatatctcacatc |
5490909 |
T |
 |
| Q |
127 |
ttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatttttg |
226 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||| ||||||| |||||||| || || || |
|
|
| T |
5490908 |
ttggagaaaccctcaagatcctgctgaaggtgagtgttcgtataagatagatacacatggttttcctcaactagttactgcaaagggagcaaacgttctg |
5490809 |
T |
 |
| Q |
227 |
tatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaagaat |
326 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||||| ||| || ||||||||||||||| |
|
|
| T |
5490808 |
tatagaggagggtcatggaatggatttcttttcaccggtgtttcttggctaagactgcatagagtcttgaatttctcggtagtggtcactgacaaagaat |
5490709 |
T |
 |
| Q |
327 |
tctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgt |
403 |
Q |
| |
|
|||||||||||||||||||| | ||| |||||||| ||||||| ||| ||||||||||| |||| |||||||||| |
|
|
| T |
5490708 |
tctcttatcaatatgaaactttaaacagttcaattaatactagattggtgctagatccatatggaacttcacaacgt |
5490632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 23 - 403
Target Start/End: Complemental strand, 5503825 - 5503445
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| ||| |||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5503825 |
cagaactttctgtgggaaagttttgactatcccggtaacactttccttgctggaatgaagctgaaaagtaacttagttactggtccatatagatatctca |
5503726 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
||||||||| | ||||||||||||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| || | |
|
|
| T |
5503725 |
catcttggaaagaccctcaagatcctgctgagggtgagtgttcatataagatagatacacatggttttcctcaactggttactgcaaagggagcaaaggt |
5503626 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaa |
322 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||| |||||| |
|
|
| T |
5503625 |
tctgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagactgcgtagagtcttgaatttctcagtagtagtcaccgacaaa |
5503526 |
T |
 |
| Q |
323 |
gaattctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgt |
403 |
Q |
| |
|
|||||||||||||||||||||||| | ||| |||||||| ||||||| ||| ||||||||||| |||| |||||||||| |
|
|
| T |
5503525 |
gaattctcttatcaatatgaaactttaaacagttcaattaatactagattggtgctagatccatatggaacttcacaacgt |
5503445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 23 - 370
Target Start/End: Complemental strand, 5455835 - 5455488
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
5455835 |
cagaactttttgtgggaaagttttgattatcctggtaacactttccttgctggaatgaagctgaaaagtaacttagttacgggtccatatagatatctca |
5455736 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
| |||||||||| |||| | |||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||| |||||| |||||| | || | | |
|
|
| T |
5455735 |
cttcttggagaaaccctgatgatcctgctgaaggtgagtgttcatataagatagatacacatggttttccccaactgcttactgcaaagggggcaataat |
5455636 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaa |
322 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5455635 |
tctgtatagagcagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcatagagtcttgaatttctcagtaatgttcactgacaaa |
5455536 |
T |
 |
| Q |
323 |
gaattctcttatcaatatgaaactatgaaccattcaattattactaga |
370 |
Q |
| |
|
||| ||||||| |||||||||| ||||| |||||||||||||||| |
|
|
| T |
5455535 |
gaaatctcttacgaatatgaaaccttgaacagttcaattattactaga |
5455488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 23 - 370
Target Start/End: Complemental strand, 5447273 - 5446926
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5447273 |
cagaactttttgtgggaaagttttgactatcctggtgacactttccttcctggaatgaagctgaaaagtaacttagttactggtccatatagatatctca |
5447174 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||| || | || ||| |
|
|
| T |
5447173 |
catcatggagaagccctcaagatcctgctgaaggtgagtgttcgtataagatagatacacatggttttcctcaactggttactgcaaacggggcaatatt |
5447074 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaa |
322 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
5447073 |
tctgtatagagcagggtcatggaatggatttcttttcactggtgtttcttggcaaagagtgcatagagtcatgaatttctctgtaatattcactgacaaa |
5446974 |
T |
 |
| Q |
323 |
gaattctcttatcaatatgaaactatgaaccattcaattattactaga |
370 |
Q |
| |
|
||| ||||||| |||||||||||| ||| | |||||||||||||||| |
|
|
| T |
5446973 |
gaaatctcttaccaatatgaaactttgagcagttcaattattactaga |
5446926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 23 - 407
Target Start/End: Complemental strand, 5526665 - 5526281
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| ||| |||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5526665 |
cagaactttctgtgggaaagttttgactatcccggtaacactttccttgctggaatgaagctgaaaagtaacttagttactggtccatatagatatctca |
5526566 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
| |||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||||| | |||||||| |||| | |
|
|
| T |
5526565 |
cttcttggagaaaccctcaagatcctgctgaaggtgagtattcatataggatcgatatggatggttttcctcaactggttacagtaaagggagcaagaat |
5526466 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaa |
322 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||| |||| | | |||||||| || ||||||||||||||||||||| | |||| ||||||| |
|
|
| T |
5526465 |
tctgtatagaggaggaccatggaatggatttcttttcagtggttctccctggcaaagtttgtctagagtcttgaatttctcagtagttttcagtgacaaa |
5526366 |
T |
 |
| Q |
323 |
gaattctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgtcttc |
407 |
Q |
| |
|
||| |||||||||||||||||||| ||||| |||||||| ||||||| ||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
5526365 |
gaagtctcttatcaatatgaaactttgaacagttcaattaatactagactggtgctagattcaaacggaatttcacaacgtcttc |
5526281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 23 - 408
Target Start/End: Original strand, 5801741 - 5802132
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5801741 |
cagaactttttgtgggaaagttttgactatcctggtaacactttccttcctggaatgaagctgaaaagtaacttagttactggtccatatagatatctca |
5801840 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| || | | |
|
|
| T |
5801841 |
catcttggagaagccctcaagatcctgctgaaggtgagtgttcatataggatagatatgcctggttttcctcaacttgttactgcaaagggagcaacagt |
5801940 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttc------ttggcaaagaatgcacagagtcttgaatttctcagtaatgttcact |
316 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||| || | | |||| |||||||| ||||| | |||| | |
|
|
| T |
5801941 |
tctgtatagaggagggtcatggaatggatttcttttcagtagtgtttcctggcattggcaagtaacaaataaagtcatgaatttcacagtagtcttcaat |
5802040 |
T |
 |
| Q |
317 |
gacaaagaattctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgtcttct |
408 |
Q |
| |
|
|||||||||||||||||| |||| |||| ||||| | ||||||||| | |||||| |||||||||| |||||||||||||||| |||| |
|
|
| T |
5802041 |
gacaaagaattctcttatgaataccaaaccgtgaacaagtcaattattgcaagaatgatactagatccatacggaaattcacaacgttttct |
5802132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 27 - 386
Target Start/End: Original strand, 5827419 - 5827778
Alignment:
| Q |
27 |
attttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctcacatc |
126 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| || || |
|
|
| T |
5827419 |
attttttgtgggaaagttttaattatcctggtgacactttccttgctggaatgaagctgagaagtaacttagttactggtccatatagatatctgacttc |
5827518 |
T |
 |
| Q |
127 |
ttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatttttg |
226 |
Q |
| |
|
||||||| | || |||||||||| || ||||||| ||| ||||||||||||| |||||||||||||||| ||||| || ||||||| ||| | || || |
|
|
| T |
5827519 |
ttggagatcctctgaagatcctgctgacggtgagttttcgtataggatagatactcatggttttcctcaacaggttattgcaaagggaaaaacaattctg |
5827618 |
T |
 |
| Q |
227 |
tatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaagaat |
326 |
Q |
| |
|
|||||||| |||||||||||||||| || ||||| ||| ||||||||||||| | | || ||||||||||||| |||| | ||||| ||||| |||||| |
|
|
| T |
5827619 |
tatagaggtgggtcatggaatggatatcatttcaatggagtttcttggcaaatagttcatagagtcttgaattactcattcatgttaactgataaagaag |
5827718 |
T |
 |
| Q |
327 |
tctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccat |
386 |
Q |
| |
|
| |||||||||||| ||| | ||| |||||| ||||||||| | | ||||||||||| |
|
|
| T |
5827719 |
ttacttatcaatatgcaacgtttaacagttcaatgattactagatttgtgctagatccat |
5827778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 407
Target Start/End: Original strand, 5848144 - 5848528
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5848144 |
cagaactttttgtgggaaagttttgattatcctggtaacactttccttgctggaatgaagctgaaaagtaacttagttactggtccatatagatatctca |
5848243 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
| ||||||||| | || |||||||||| || || |||| |||| |||||||||| || ||||||||||||| | || ||||||| | | |
|
|
| T |
5848244 |
cttcttggagatcctctgaagatcctgctgacggcgagttttcagtgaggatagatactcacggttttcctcaacaccaaattgcaaagggaacgacaac |
5848343 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaa |
322 |
Q |
| |
|
| | | |||||||||||| |||||||||| |||||||||||| | | |||||||||||| | | | ||||||| |||| | |||| ||||||||| |
|
|
| T |
5848344 |
tatatttagaggagggtcgtggaatggatatcttttcactggagctacttggcaaagaaattataatatattgaattactcatttgtgttaactgacaaa |
5848443 |
T |
 |
| Q |
323 |
gaattctcttatcaatatgaaactatgaaccattcaattattactagaatggagctagatccatccggaaattcacaacgtcttc |
407 |
Q |
| |
|
||| || ||| ||||||||||||| | ||| || ||||||||||||| | | |||| |||||| |||| |||||||||||||| |
|
|
| T |
5848444 |
gaagtcacttttcaatatgaaactttaaacagtttaattattactagagttgtgctaaatccatatggaacttcacaacgtcttc |
5848528 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 20344437 - 20344215
Alignment:
| Q |
29 |
tttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctcacatctt |
128 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||| || ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |
|
|
| T |
20344437 |
tttttgtgggaaagctttgattatcctggtgacacgttgcttgctggaatgaagctgaaaagtaacttagtgactggtccatatagatatctcacttctt |
20344338 |
T |
 |
| Q |
129 |
ggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatttttgta |
228 |
Q |
| |
|
|||||| | || |||||||||| | |||||||| ||| |||||||| |||| |||||||||||||||| |||| || ||||||| || | || |||| |
|
|
| T |
20344337 |
ggagaacctctgaagatcctgctgtaggtgagttttcgtataggatcgatactcatggttttcctcaacaagttattgcaaagggaacaacaattatgta |
20344238 |
T |
 |
| Q |
229 |
tagaggagggtcatggaatggat |
251 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
20344237 |
tagaggagggtcatggaatggat |
20344215 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 23 - 370
Target Start/End: Original strand, 25808539 - 25808886
Alignment:
| Q |
23 |
cagaattttttgtgggaaagttttgattatcctggtaacaatttccttgcgggaatgaagctgaaaagtaatttagttactggtccatatagatatctca |
122 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
25808539 |
cagaactttttgtgggaaagttttgactatcctggtgacactttccttcctggaatgaagctgaaaagtaacttagttactggtccatatagatatctca |
25808638 |
T |
 |
| Q |
123 |
catcttggagaagccctcaagatcctgccgaaggtgagtgttcatataggatagatatgcatggttttcctcaactggttactgaaaagggagaaagatt |
222 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||| || | || ||| |
|
|
| T |
25808639 |
catcatggagaagccctcaagatcctgctgaaggtgagtgttcgtataagatagatacacatggttttcctcaactggttactgcaaacggggcaatatt |
25808738 |
T |
 |
| Q |
223 |
tttgtatagaggagggtcatggaatggatttcttttcactggtgtttcttggcaaagaatgcacagagtcttgaatttctcagtaatgttcactgacaaa |
322 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
25808739 |
tctgtatagagcagggtcatggaatggatttcttttcactggtgtttcttggcaaagagtgcatagagtcatgaatttctctgtaatattcactgacaaa |
25808838 |
T |
 |
| Q |
323 |
gaattctcttatcaatatgaaactatgaaccattcaattattactaga |
370 |
Q |
| |
|
||| ||||||| |||||||||||| ||| | |||||||||||||||| |
|
|
| T |
25808839 |
gaaatctcttaccaatatgaaactttgagcagttcaattattactaga |
25808886 |
T |
 |
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