View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14139_low_5 (Length: 290)
Name: NF14139_low_5
Description: NF14139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14139_low_5 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 13 - 272
Target Start/End: Complemental strand, 10494702 - 10494443
Alignment:
| Q |
13 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494702 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
10494603 |
T |
 |
| Q |
113 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494602 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
10494503 |
T |
 |
| Q |
213 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494502 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
10494443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 272
Target Start/End: Complemental strand, 13333784 - 13333525
Alignment:
| Q |
13 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
13333784 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctact |
13333685 |
T |
 |
| Q |
113 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
212 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| |
|
|
| T |
13333684 |
tcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcccactgatatcgacgt |
13333585 |
T |
 |
| Q |
213 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
13333584 |
tattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctc |
13333525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 8667260 - 8667516
Alignment:
| Q |
14 |
atattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacct |
113 |
Q |
| |
|
|||||||||||||| |||||||||| || |||| |||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||| |||| |
|
|
| T |
8667260 |
atattcatacactcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgtaaataaagcatctacct |
8667359 |
T |
 |
| Q |
114 |
caacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgtt |
213 |
Q |
| |
|
|||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || |
|
|
| T |
8667360 |
caacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgactgatgtccacttt |
8667459 |
T |
 |
| Q |
214 |
attcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctc |
270 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8667460 |
attcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctc |
8667516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 8654290 - 8654549
Alignment:
| Q |
13 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
112 |
Q |
| |
|
|||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8654290 |
aatattgatacactcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
8654389 |
T |
 |
| Q |
113 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
212 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || || || ||||| | |
|
|
| T |
8654390 |
tcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttaccgctaatttccactt |
8654489 |
T |
 |
| Q |
213 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||||||||||||||||||||| ||||| || | ||||||||||||||| ||||| |||| |
|
|
| T |
8654490 |
tattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctc |
8654549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 8659207 - 8659462
Alignment:
| Q |
17 |
ttcatacactcgatgaaaaag-tctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctca |
115 |
Q |
| |
|
||||||||||| || |||||| || ||||| ||||||||||| |||||||||||||| ||||| | ||||| |||||| |||||||| |||||||||| |
|
|
| T |
8659207 |
ttcatacactc-attaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctgaaataaagaatcgacctca |
8659305 |
T |
 |
| Q |
116 |
acggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttat |
215 |
Q |
| |
|
|| ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||| |
|
|
| T |
8659306 |
acagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttgggttaccactaatgtccactttat |
8659405 |
T |
 |
| Q |
216 |
tcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
||||||||||||||||||| ||||| || |||||||||||| |||| |||||||||| |
|
|
| T |
8659406 |
tcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctc |
8659462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 41 - 272
Target Start/End: Original strand, 1301328 - 1301559
Alignment:
| Q |
41 |
atattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagaga |
140 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||| |||| |||||||| |
|
|
| T |
1301328 |
atattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaataaagaatcgacctcaacggtggtgactaaagcaaaagaga |
1301427 |
T |
 |
| Q |
141 |
gtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaa |
240 |
Q |
| |
|
|| ||||||||||||||||||| ||| |||||||||||||||||||||| | || ||||| |||||||| |||||||||||| |||||||||| ||||| |
|
|
| T |
1301428 |
gtgtcctttttgccctctcacacgcaattctcaacctccttaaggatttctggttaccactaatgtccactttattcttctttctgaactcctctacaaa |
1301527 |
T |
 |
| Q |
241 |
ataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|| |||||||||| ||||| |||||||||| |
|
|
| T |
1301528 |
gtagctcaccattctattatcaaagtcctctc |
1301559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 17260100 - 17260338
Alignment:
| Q |
32 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaag |
131 |
Q |
| |
|
|||| ||| ||||| ||||| ||||| ||||||||||||||||| |||||||| | | ||| |||||||||| || |||||||| |||| ||| | | |
|
|
| T |
17260100 |
aaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacattggtcacagagg |
17260199 |
T |
 |
| Q |
132 |
aaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactc |
231 |
Q |
| |
|
|||||| ||| |||||||||| | ||||| |||||||||||||||||||||| |||||| |||||| | ||||||| || ||| | |||||| ||| |
|
|
| T |
17260200 |
caaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttcccaataatgtccaattttttcgttcttttgatctc |
17260299 |
T |
 |
| Q |
232 |
ctcaacaaaataattcaccattctgttatcgaagtcctc |
270 |
Q |
| |
|
||| |||||||| | ||||||||| ||||| |||||||| |
|
|
| T |
17260300 |
ctctacaaaatagtacaccattctattatcaaagtcctc |
17260338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 27831186 - 27830944
Alignment:
| Q |
30 |
tgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaa |
129 |
Q |
| |
|
|||||| ||| ||||| ||||||||||| || ||||||||||| |||| | ||||| || ||| |||||| ||||| | ||||| || ||| ||| |
|
|
| T |
27831186 |
tgaaaaggtccatattgatttcctcaaactttgcacgagtgatcattgaaaagaagtcaatgccctcaaataaggcatctatctcaatagtagtgtcaac |
27831087 |
T |
 |
| Q |
130 |
agaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaac |
229 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| ||||||| |||||| |||| | |||| |||||||| |||||||| | |||||||| |||||| |
|
|
| T |
27831086 |
agaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaac |
27830987 |
T |
 |
| Q |
230 |
tcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||| |||||||| |||||||| || ||||| |||||||||| |
|
|
| T |
27830986 |
acctccacaaaatagttcaccatcctattatcaaagtcctctc |
27830944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 272
Target Start/End: Original strand, 3147132 - 3147363
Alignment:
| Q |
41 |
atattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagaga |
140 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||| | ||||| | |||| |||||||| ||| | ||||| |||||||| | || |||||| | |
|
|
| T |
3147132 |
atattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaataaagaatctatctcaatggtggtgatgacagcaaaagata |
3147231 |
T |
 |
| Q |
141 |
gtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaa |
240 |
Q |
| |
|
|||| | |||||| || ||||| || ||| ||||||||||||||| | ||| ||| |||| ||||| || || |||||||| || |||||| |||| |
|
|
| T |
3147232 |
gtattcgttttgctctttcacacgccgttttcaacctccttaaggctcttgagttctcactaatgtctaccttgttcttcttcttaaactcccgtgcaaa |
3147331 |
T |
 |
| Q |
241 |
ataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|| |||||||| || ||||| |||||||||| |
|
|
| T |
3147332 |
gtagttcaccatcctattatcaaagtcctctc |
3147363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 8545604 - 8545727
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
243 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||| || ||| |||| ||| || ||| | || |||||| | |||||||||| ||||| || |
|
|
| T |
8545604 |
tcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaaagta |
8545703 |
T |
 |
| Q |
244 |
attcaccattctgttatcgaagtc |
267 |
Q |
| |
|
|||||||||||||||||| ||||| |
|
|
| T |
8545704 |
attcaccattctgttatcaaagtc |
8545727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 270
Target Start/End: Original strand, 17267798 - 17268036
Alignment:
| Q |
32 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaag |
131 |
Q |
| |
|
|||| ||| ||||| ||||||||||| ||||||||||||||||| |||||||| || | ||| |||||||||| || |||||||| |||| ||| | | |
|
|
| T |
17267798 |
aaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacattggtcacagagg |
17267897 |
T |
 |
| Q |
132 |
aaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactc |
231 |
Q |
| |
|
||||| ||| |||||||||| | ||||| ||||||||||||||||| | || |||||| |||||| || | || || || ||| |||||| || |
|
|
| T |
17267898 |
cgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttcccaacaattttcaatttttttttccttttgatttc |
17267997 |
T |
 |
| Q |
232 |
ctcaacaaaataattcaccattctgttatcgaagtcctc |
270 |
Q |
| |
|
|||||||||||| | |||||||| ||||| |||||||| |
|
|
| T |
17267998 |
ctcaacaaaatagtataccattctattatcaaagtcctc |
17268036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 8646757 - 8646926
Alignment:
| Q |
53 |
tcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttg |
152 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| || || ||||||||| ||| | |||| ||||||| | ||| |||||| ||| ||||||||| |
|
|
| T |
8646757 |
tcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttg |
8646856 |
T |
 |
| Q |
153 |
ccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctt |
222 |
Q |
| |
|
| ||||| || || ||||||||||||||||||| | ||| || ||| | |||||||| || |||||||| |
|
|
| T |
8646857 |
ctctctcgcatgccgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttctt |
8646926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 8570282 - 8570399
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
243 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||| |||| |||||| |||| ||| || ||| |||| |||||||| ||||||| || ||||| | |
|
|
| T |
8570282 |
tcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaaagtg |
8570381 |
T |
 |
| Q |
244 |
attcaccattctgttatc |
261 |
Q |
| |
|
| ||| |||||||||||| |
|
|
| T |
8570382 |
agtcaacattctgttatc |
8570399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 185
Target Start/End: Original strand, 6789380 - 6789524
Alignment:
| Q |
41 |
atattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagaga |
140 |
Q |
| |
|
||||| ||||||||||| ||||| ||||| | ||||||| |||||||| ||| |||||||| || ||||||| || ||||| | | |||||||| |
|
|
| T |
6789380 |
atattgatttcctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaagaga |
6789479 |
T |
 |
| Q |
141 |
gtatcctttttgccctctcacaggcagttctcaacctccttaagg |
185 |
Q |
| |
|
||| |||||| ||||| ||||| |||||||||||||| ||||||| |
|
|
| T |
6789480 |
gtacccttttggccctttcacacgcagttctcaaccttcttaagg |
6789524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 29582038 - 29581910
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
243 |
Q |
| |
|
|||| |||||||||||||| || ||||||| | ||||||| | |||||| |||||||| ||||||| || |||||| | || ||||| | |||| || |
|
|
| T |
29582038 |
tcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaaagta |
29581939 |
T |
 |
| Q |
244 |
attcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
||||||||||| |||||| |||||||||| |
|
|
| T |
29581938 |
attcaccattcggttatcaaagtcctctc |
29581910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 8576297 - 8576420
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
243 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||||||| ||||| |||| |||| || ||| | || | ||| || ||||||||| |||||| | |
|
|
| T |
8576297 |
tcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaaagtg |
8576396 |
T |
 |
| Q |
244 |
attcaccattctgttatcgaagtc |
267 |
Q |
| |
|
|| ||||||| ||||||| ||||| |
|
|
| T |
8576397 |
atccaccattatgttatcaaagtc |
8576420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 7877930 - 7877802
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
243 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| | || | || || |||| |||||||| ||||||||| | || |||||| || |||| |
|
|
| T |
7877930 |
tccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaatg |
7877831 |
T |
 |
| Q |
244 |
attcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||| |||||||||||| |||||||||| |
|
|
| T |
7877830 |
gttcaacattctgttatcaaagtcctctc |
7877802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 8383073 - 8382950
Alignment:
| Q |
144 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
243 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||| || | | ||||| |||||||| |||||| |||| |||| | |||||||| |||||||| || |
|
|
| T |
8383073 |
tcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaacaaagta |
8382974 |
T |
 |
| Q |
244 |
attcaccattctgttatcgaagtc |
267 |
Q |
| |
|
||||| ||||||||||| ||||| |
|
|
| T |
8382973 |
cttcacgattctgttatctaagtc |
8382950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 29577864 - 29577741
Alignment:
| Q |
149 |
tttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattca |
248 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||| ||| ||| |||||||| || |||||| | || ||||| | ||||| | ||| |
|
|
| T |
29577864 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggctca |
29577765 |
T |
 |
| Q |
249 |
ccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
||||| | |||||||||||||||| |
|
|
| T |
29577764 |
ccattttattatcgaagtcctctc |
29577741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 8616528 - 8616598
Alignment:
| Q |
20 |
atacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgat |
90 |
Q |
| |
|
||||||||| | |||| ||| ||||| ||||||||||| || ||||||||||||||||||| || ||||| |
|
|
| T |
8616528 |
atacactcgttaaaaaggtccatattgatttcctcaaacttaacacgagtgattgatgaagagaaatcgat |
8616598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 170; Significance: 3e-91; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 13 - 270
Target Start/End: Complemental strand, 9336219 - 9335962
Alignment:
| Q |
13 |
aatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacc |
112 |
Q |
| |
|
||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9336219 |
aatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacc |
9336120 |
T |
 |
| Q |
113 |
tcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgt |
212 |
Q |
| |
|
||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | |
|
|
| T |
9336119 |
tcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttctgcttgatgtccactt |
9336020 |
T |
 |
| Q |
213 |
tattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctc |
270 |
Q |
| |
|
||||||||||||| ||||| || |||||||| || |||||||||||||| |||||||| |
|
|
| T |
9336019 |
tattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctc |
9335962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 272
Target Start/End: Original strand, 30775111 - 30775351
Alignment:
| Q |
32 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaag |
131 |
Q |
| |
|
|||| ||| ||||| ||||||||||| ||| ||||||||||||||||||||||||| || | ||||||| ||| | |||||| |||| ||| |
|
|
| T |
30775111 |
aaaaggtccatattgatttcctcaaacttgacacgagtgattgatgaagaaaagtcaatgtcttgaaataaattatctatctcaacaaatgtgagaaact |
30775210 |
T |
 |
| Q |
132 |
aaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactc |
231 |
Q |
| |
|
|| |||||| ||||||||||| | ||||| |||||||||||| || || | | |||||||||| | ||||||||||| |||||| | || || || |
|
|
| T |
30775211 |
tgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggattcccggtaatgtccacgttgttcttcgtcttaaattc |
30775310 |
T |
 |
| Q |
232 |
ctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
||| ||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
30775311 |
ctctacaaagtaattcaacattctgttatcaaagtcctctc |
30775351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 35132457 - 35132547
Alignment:
| Q |
182 |
aaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||| ||||| ||||||||| ||||| || || ||||| | |||||||| | ||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
35132457 |
aaggcttttgaattcccactaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctc |
35132547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 35132299 - 35132368
Alignment:
| Q |
15 |
tattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaa |
84 |
Q |
| |
|
||||||||||||| | |||| |||| ||| ||||||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
35132299 |
tattcatacactcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaa |
35132368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 16657841 - 16657586
Alignment:
| Q |
17 |
ttcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaa |
116 |
Q |
| |
|
||||||||||| |||||| || ||||||||||||||||| |||||||| |||||||||||||||||||| |||||| |||||||| ||| ||||||| |
|
|
| T |
16657841 |
ttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcaa |
16657742 |
T |
 |
| Q |
117 |
cggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttatt |
216 |
Q |
| |
|
| ||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||| |||| | ||| |||||||| |||||||| ||||| |
|
|
| T |
16657741 |
cagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaaggctcttgagttcccacttatgtccaccttatt |
16657642 |
T |
 |
| Q |
217 |
cttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||||||| |||||||| ||||| || |||||| |||||||||| |||||||||| |
|
|
| T |
16657641 |
cttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctc |
16657586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 272
Target Start/End: Original strand, 14703267 - 14703507
Alignment:
| Q |
32 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaag |
131 |
Q |
| |
|
|||||||| ||||| ||||| ||||| ||||| | | |||| |||||||||||||| || | |||||||||||| ||||||| |||| ||||| |
|
|
| T |
14703267 |
aaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacctcaatagtggcgacaactt |
14703366 |
T |
 |
| Q |
132 |
aaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactc |
231 |
Q |
| |
|
||||| ||| | |||||||||||||| || || |||||||| |||||||||| ||||||||| ||||| ||||||| | || || | |||||||| |
|
|
| T |
14703367 |
ggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggatttccactaatgtccaatctgttttttctcttgaactc |
14703466 |
T |
 |
| Q |
232 |
ctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
| |||||| || |||||||||||||||||||||||||||| |
|
|
| T |
14703467 |
ttgaacaaagtagttcaccattctgttatcgaagtcctctc |
14703507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 7542071 - 7542325
Alignment:
| Q |
18 |
tcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaac |
117 |
Q |
| |
|
||||||||||| | |||| || ||||| || |||||||| ||||| | | |||| |||||||||||||| || || |||||||| ||| ||||||| |
|
|
| T |
7542071 |
tcatacactcgttaaaaagatccatattcatctcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaat |
7542170 |
T |
 |
| Q |
118 |
ggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattc |
217 |
Q |
| |
|
|||| |||| | ||||| ||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||| || ||| |
|
|
| T |
7542171 |
agtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttc |
7542270 |
T |
 |
| Q |
218 |
ttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|| | |||||||| | ||||| || ||| ||||||| ||||| ||||| |||| |
|
|
| T |
7542271 |
tttctcttgaactcttgtacaaagtagttcgccattctattatcaaagtcttctc |
7542325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 12234662 - 12234788
Alignment:
| Q |
146 |
ctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataat |
245 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||| ||||||||| ||||| |||||||| || ||||| | |||||||| | | ||| || | |
|
|
| T |
12234662 |
ctttttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagt |
12234761 |
T |
 |
| Q |
246 |
tcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
| |||||||||||||| |||||||||| |
|
|
| T |
12234762 |
ttaccattctgttatcaaagtcctctc |
12234788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 272
Target Start/End: Complemental strand, 16662199 - 16662061
Alignment:
| Q |
134 |
aaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcct |
233 |
Q |
| |
|
||||||||| ||||||| ||| | ||||| | ||||||||||||||| |||| | ||||||||| | |||| ||||| || |||||| | || || || | |
|
|
| T |
16662199 |
aaagagagtgtccttttcgccttttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctt |
16662100 |
T |
 |
| Q |
234 |
caacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
||||| || |||| |||||||||||| |||||||||| |
|
|
| T |
16662099 |
tcacaaagtagttcaacattctgttatcaaagtcctctc |
16662061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 43625256 - 43625421
Alignment:
| Q |
17 |
ttcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaa |
116 |
Q |
| |
|
|||| ||||||| |||||| || ||||| ||||| ||||||||||||||||||||||||||| | ||||| || || ||||||| ||| ||||||| |
|
|
| T |
43625256 |
ttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaataccacggaataaagaatctacctcaa |
43625355 |
T |
 |
| Q |
117 |
cggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctcctta |
182 |
Q |
| |
|
||| ||| ||| |||||| ||| |||||||| | ||||| || || ||||||||||| |||| |
|
|
| T |
43625356 |
tagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaaccttctta |
43625421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 11999374 - 11999425
Alignment:
| Q |
140 |
agtatcctttttgccctctcacaggcagttctcaacctccttaaggattttg |
191 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
11999374 |
agtattctttttgccctctcacaagcagttctcaacctcctcaaggcttttg |
11999425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 12245607 - 12245556
Alignment:
| Q |
140 |
agtatcctttttgccctctcacaggcagttctcaacctccttaaggattttg |
191 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |
|
|
| T |
12245607 |
agtattctttttgccctctcacaagcagttctcaatctcctcaaggcttttg |
12245556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 17666872 - 17666764
Alignment:
| Q |
152 |
gccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcacca |
251 |
Q |
| |
|
||||||||||| ||||| | ||||||| | | | | |||| || |||||||||||| ||| ||||| |||||||||| | |||||| | |||||||| |
|
|
| T |
17666872 |
gccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaacaaagtgattcacca |
17666773 |
T |
 |
| Q |
252 |
ttctgttat |
260 |
Q |
| |
|
||||||||| |
|
|
| T |
17666772 |
ttctgttat |
17666764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 4678879 - 4678627
Alignment:
| Q |
19 |
catacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacg |
118 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||||||| ||||||||||| || |||||||||||||| |||||| |||||||| ||| || ||||| |
|
|
| T |
4678879 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctac-tcaaca |
4678781 |
T |
 |
| Q |
119 |
gtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattct |
218 |
Q |
| |
|
||||||||||| | ||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||||| ||| ||| |||||||| ||||||| |
|
|
| T |
4678780 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaagggttttgcgttcttactaatgtccacattattct |
4678681 |
T |
 |
| Q |
219 |
tctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
4678680 |
tctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctc |
4678627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 272
Target Start/End: Original strand, 15594893 - 15595133
Alignment:
| Q |
32 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaag |
131 |
Q |
| |
|
|||||||| || || ||||| ||||| |||| |||||| | |||||| | ||||| || || |||||||| ||| ||||||| ||| |||||| || |
|
|
| T |
15594893 |
aaaaagtccatgttgatttcttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgttaaataaacaatctacctcaatggtagtgacagtag |
15594992 |
T |
 |
| Q |
132 |
aaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactc |
231 |
Q |
| |
|
||||||||||| |||||||||||| || || ||||||||||| ||||| |||| |||| |||||| | || ||||| || |||||| | ||||| || |
|
|
| T |
15594993 |
taaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattc |
15595092 |
T |
 |
| Q |
232 |
ctcaacaaaataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|| |||| || || |||||||||||||| |||||||||| |
|
|
| T |
15595093 |
ctgcgcaaagtagttgaccattctgttatcaaagtcctctc |
15595133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 34467091 - 34467051
Alignment:
| Q |
35 |
aagtctatattaatttcctcaaatttggcacgagtgattga |
75 |
Q |
| |
|
||||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
34467091 |
aagtccatattgatttcctcaaacttggcacgagtgattga |
34467051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 272
Target Start/End: Original strand, 28219786 - 28220017
Alignment:
| Q |
41 |
atattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagaga |
140 |
Q |
| |
|
||||| ||||||||||| || |||||||| ||||||||| | || || || || |||||||| ||| ||||||| ||||| ||||| || |||||| | |
|
|
| T |
28219786 |
atattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaatctacctcaatggtggcgacaacagcaaaagata |
28219885 |
T |
 |
| Q |
141 |
gtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaa |
240 |
Q |
| |
|
|| |||||||||| |||| || || ||||||||||||||||||| | ||| || ||| | |||||||| || |||||||| || |||||||| | || |
|
|
| T |
28219886 |
gtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaa |
28219985 |
T |
 |
| Q |
241 |
ataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|| |||||||| || |||| |||||||||| |
|
|
| T |
28219986 |
gtagttcaccatcctactatcaaagtcctctc |
28220017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 272
Target Start/End: Original strand, 43744684 - 43744915
Alignment:
| Q |
41 |
atattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagaga |
140 |
Q |
| |
|
||||| ||||||||||| || | ||||||||||| || | | || || || ||| |||||||| ||| ||||||| |||||||||| || |||||| | |
|
|
| T |
43744684 |
atattgatttcctcaaacttagtacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagata |
43744783 |
T |
 |
| Q |
141 |
gtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaa |
240 |
Q |
| |
|
| |||||||||| || || || || ||||||||||||||||| | | |||| || ||| | |||||||| || |||||||| || |||||||| | || |
|
|
| T |
43744784 |
atgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaa |
43744883 |
T |
 |
| Q |
241 |
ataattcaccattctgttatcgaagtcctctc |
272 |
Q |
| |
|
|| |||||||| || ||||| || ||||||| |
|
|
| T |
43744884 |
gtagttcaccatcctattatcaaaatcctctc |
43744915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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